Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-21 21:41:51 (646788): Detected: vboxwrapper 26206
2025-02-21 21:41:51 (646788): Detected: BOINC client v8.1.0
2025-02-21 21:41:51 (646788): Detected: VirtualBox VboxManage Interface (Version: 7.0.24)
2025-02-21 21:41:51 (646788): Successfully copied 'init_data.xml' to the shared directory.
2025-02-21 21:41:52 (646788): Create VM. (boinc_8c07c34f985d0c75, slot#4)
2025-02-21 21:41:52 (646788): Setting Memory Size for VM. (4600MB)
2025-02-21 21:41:52 (646788): Setting CPU Count for VM. (6)
2025-02-21 21:41:52 (646788): Setting Chipset Options for VM.
2025-02-21 21:41:52 (646788): Setting Graphics Controller Options for VM.
2025-02-21 21:41:52 (646788): Setting Boot Options for VM.
2025-02-21 21:41:52 (646788): Setting Network Configuration for NAT.
2025-02-21 21:41:52 (646788): Enabling VM Network Access.
2025-02-21 21:41:52 (646788): Disabling USB Support for VM.
2025-02-21 21:41:52 (646788): Disabling COM Port Support for VM.
2025-02-21 21:41:52 (646788): Disabling LPT Port Support for VM.
2025-02-21 21:41:52 (646788): Disabling Audio Support for VM.
2025-02-21 21:41:52 (646788): Disabling Clipboard Support for VM.
2025-02-21 21:41:52 (646788): Disabling Drag and Drop Support for VM.
2025-02-21 21:41:53 (646788): Adding storage controller(s) to VM.
2025-02-21 21:41:53 (646788): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-21 21:41:54 (646788): Adding VirtualBox Guest Additions to VM.
2025-02-21 21:41:54 (646788): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-21 21:41:54 (646788): forwarding host port 45037 to guest port 80
2025-02-21 21:41:54 (646788): Enabling remote desktop for VM.
2025-02-21 21:41:54 (646788): Required extension pack not installed, remote desktop not enabled.
2025-02-21 21:41:54 (646788): Enabling shared directory for VM.
2025-02-21 21:41:54 (646788): Starting VM using VBoxManage interface. (boinc_8c07c34f985d0c75, slot#4)
2025-02-21 21:41:56 (646788): Successfully started VM. (PID = '647372')
2025-02-21 21:41:56 (646788): Reporting VM Process ID to BOINC.
2025-02-21 21:41:56 (646788): Guest Log: BIOS: VirtualBox 7.0.24
2025-02-21 21:41:56 (646788): Guest Log: CPUID EDX: 0x178bfbff
2025-02-21 21:41:56 (646788): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-21 21:41:56 (646788): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-21 21:41:56 (646788): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-21 21:41:56 (646788): Detected: Web Application Enabled (http://localhost:45037)
2025-02-21 21:41:56 (646788): Preference change detected
2025-02-21 21:41:56 (646788): Setting CPU throttle for VM. (100%)
2025-02-21 21:41:56 (646788): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-21 21:41:58 (646788): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-21 21:41:58 (646788): Guest Log: BIOS: Booting from Hard Disk...
2025-02-21 21:42:01 (646788): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-21 21:42:01 (646788): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-21 21:42:01 (646788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-21 21:42:07 (646788): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-21 21:42:07 (646788): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-21 21:42:13 (646788): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-21 21:42:13 (646788): Guest Log: 00:00:00.000178 main     Log opened 2025-02-22T04:42:11.579578000Z
2025-02-21 21:42:13 (646788): Guest Log: 00:00:00.000306 main     OS Product: Linux
2025-02-21 21:42:13 (646788): Guest Log: 00:00:00.000332 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-21 21:42:13 (646788): Guest Log: 00:00:00.000350 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-21 21:42:13 (646788): Guest Log: 00:00:00.000368 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-21 21:42:13 (646788): Guest Log: 00:00:00.000368 main     Process ID: 1333
2025-02-21 21:42:13 (646788): Guest Log: 00:00:00.000369 main     Package type: LINUX_64BITS_GENERIC
2025-02-21 21:42:13 (646788): Guest Log: 00:00:00.001284 main     5.2.32 r132073 started. Verbose level = 0
2025-02-21 21:42:13 (646788): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-21 21:42:13 (646788): Guest Log: [INFO] Mounting shared directory
2025-02-21 21:42:13 (646788): Guest Log: [INFO] Checking for init_data.xml
2025-02-21 21:42:19 (646788): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-21 21:42:19 (646788): Guest Log: [INFO] Detected branch: prod
2025-02-21 21:42:20 (646788): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-21 21:42:20 (646788): Guest Log: Copying input files
2025-02-21 21:42:21 (646788): Guest Log: Copied input files into RunAtlas.
2025-02-21 21:42:21 (646788): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-21 21:42:21 (646788): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-21 21:42:21 (646788): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-21 21:42:21 (646788): Guest Log: Further information can be found at the LHC@home message board.
2025-02-21 21:42:30 (646788): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-21 21:42:31 (646788): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-21 21:42:31 (646788): Guest Log: 2.6.3.0 1610 0 32208 142927 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-21 21:42:31 (646788): Guest Log: copied the webapp to /var/www
2025-02-21 21:42:31 (646788): Guest Log: ATHENA_PROC_NUMBER=6
2025-02-21 21:42:31 (646788): Guest Log: ATHENA_CORE_NUMBER=6
2025-02-21 21:42:33 (646788): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-21 21:42:33 (646788): Guest Log:  *** Starting ATLAS job. (PandaID=6522519491 taskID=43078919) ***
2025-02-21 23:20:58 (646788): Status Report: Elapsed Time: '6000.000000'
2025-02-21 23:20:58 (646788): Status Report: CPU Time: '24853.210000'
2025-02-22 00:23:22 (646788): VM state change detected. (old = 'running', new = 'paused')
2025-02-22 07:20:10 (646788): Error in resume VM for VM: -2135228414
Command:
VBoxManage -q controlvm "boinc_8c07c34f985d0c75" resume
Output:
VBoxManage: error: Cannot resume the machine as it is not paused (machine state: Running)
VBoxManage: error: Details: code VBOX_E_INVALID_VM_STATE (0x80bb0002), component ConsoleWrap, interface IConsole, callee nsISupports
VBoxManage: error: Context: "Resume()" at line 395 of file VBoxManageControlVM.cpp

2025-02-22 07:20:11 (646788): Guest Log: 02:41:13.911753 timesync vgsvcTimeSyncWorker: Radical host time change: 25 012 768 000 000ns (HostNow=1 740 234 008 253 000 000 ns HostLast=1 740 208 995 485 000 000 ns)
2025-02-22 07:20:11 (646788): VM state change detected. (old = 'paused', new = 'running')
2025-02-22 07:20:19 (646788): Guest Log: 02:41:23.920328 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 012 790 984 000ns (GuestNow=1 740 234 018 271 649 000 ns GuestLast=1 740 209 005 480 665 000 ns fSetTimeLastLoop=true )
2025-02-22 07:56:47 (646788): Status Report: Elapsed Time: '12000.000000'
2025-02-22 07:56:47 (646788): Status Report: CPU Time: '60312.310000'
2025-02-22 08:40:55 (646788): Guest Log:  *** Job finished ***
2025-02-22 08:40:55 (646788): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-22 08:40:55 (646788): Guest Log: 2025-02-22 15:40:42,382 | INFO     | [payload] validate_pre thread has finished
2025-02-22 08:40:55 (646788): Guest Log: 2025-02-22 15:40:43,056 | INFO     | [data] copytool_out thread has finished
2025-02-22 08:40:55 (646788): Guest Log: 2025-02-22 15:40:43,908 | INFO     | [data] queue_monitor thread has finished
2025-02-22 08:40:55 (646788): Guest Log: 2025-02-22 15:40:45,587 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139963371890496)>', '<ExcThread(monitor, started 139962607445760)>']
2025-02-22 08:40:55 (646788): Guest Log: 2025-02-22 15:40:45,955 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-22 08:40:55 (646788): Guest Log: 2025-02-22 15:40:45,955 | INFO     | [monitor] control thread has ended
2025-02-22 08:40:55 (646788): Guest Log: 2025-02-22 15:40:50,593 | INFO     | all workflow threads have been joined
2025-02-22 08:40:55 (646788): Guest Log: 2025-02-22 15:40:50,593 | INFO     | end of generic workflow (traces error code: 0)
2025-02-22 08:40:55 (646788): Guest Log: 2025-02-22 15:40:50,593 | INFO     | traces error code: 0
2025-02-22 08:40:55 (646788): Guest Log: 2025-02-22 15:40:50,593 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-22 08:40:55 (646788): Guest Log: 2025-02-22 15:40:50,644 [wrapper] ==== pilot stdout END ====
2025-02-22 08:40:55 (646788): Guest Log: 2025-02-22 15:40:50,647 [wrapper] ==== wrapper stdout RESUME ====
2025-02-22 08:40:55 (646788): Guest Log: 2025-02-22 15:40:50,651 [wrapper] pilotpid: 5974
2025-02-22 08:40:55 (646788): Guest Log: 2025-02-22 15:40:50,654 [wrapper] Pilot exit status: 0
2025-02-22 08:40:55 (646788): Guest Log: 2025-02-22 15:40:52,848 [wrapper] pandaids: 6522519491
2025-02-22 08:40:55 (646788): Guest Log: 2025-02-22 15:40:52,868 [wrapper] cleanup supervisor_pilot 15616 5975
2025-02-22 08:40:55 (646788): Guest Log: 2025-02-22 15:40:52,871 [wrapper] Test setup, not cleaning
2025-02-22 08:40:55 (646788): Guest Log: 2025-02-22 15:40:52,877 [wrapper] apfmon messages muted
2025-02-22 08:40:55 (646788): Guest Log: 2025-02-22 15:40:52,880 [wrapper] ==== wrapper stdout END ====
2025-02-22 08:40:55 (646788): Guest Log: 2025-02-22 15:40:52,883 [wrapper] ==== wrapper stderr END ====
2025-02-22 08:40:55 (646788): Guest Log:  *** Error codes and diagnostics ***
2025-02-22 08:40:55 (646788): Guest Log:     "exeErrorCode": 0,
2025-02-22 08:40:55 (646788): Guest Log:     "exeErrorDiag": "",
2025-02-22 08:40:55 (646788): Guest Log:     "pilotErrorCode": 0,
2025-02-22 08:40:55 (646788): Guest Log:     "pilotErrorDiag": "",
2025-02-22 08:40:55 (646788): Guest Log:  *** Listing of results directory ***
2025-02-22 08:40:55 (646788): Guest Log: total 324676
2025-02-22 08:40:55 (646788): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 21 22:25 runpilot2-wrapper.sh
2025-02-22 08:40:55 (646788): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 21 22:25 queuedata.json
2025-02-22 08:40:55 (646788): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 21 22:25 pilot3.tar.gz
2025-02-22 08:40:55 (646788): Guest Log: -rw-r--r--. 1 atlas atlas      6820 Feb 22 04:42 init_data.xml
2025-02-22 08:40:55 (646788): Guest Log: -rw-r--r--. 1 atlas atlas    503545 Feb 22 04:42 input.tar.gz
2025-02-22 08:40:55 (646788): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Feb 22 04:42 start_atlas.sh
2025-02-22 08:40:55 (646788): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 22 04:42 EVNT.43078917._002518.pool.root.1 -> /data/./ATLAS.root_0
2025-02-22 08:40:55 (646788): Guest Log: -rw-r--r--. 1 atlas atlas      2546 Feb 22 04:42 pandaJob.out
2025-02-22 08:40:55 (646788): Guest Log: -rw-------. 1 atlas atlas       424 Feb 22 04:43 setup.sh.local
2025-02-22 08:40:55 (646788): Guest Log: -rw-------. 1 atlas atlas    987689 Feb 22 04:46 agis_schedconf.cvmfs.json
2025-02-22 08:40:55 (646788): Guest Log: drwx------. 4 atlas atlas      4096 Feb 22 04:47 pilot3
2025-02-22 08:40:55 (646788): Guest Log: -rw-------. 1 atlas atlas 325617939 Feb 22 15:39 HITS.43078919._085490.pool.root.1
2025-02-22 08:40:55 (646788): Guest Log: -rw-------. 1 atlas atlas        98 Feb 22 15:40 pilot_heartbeat.json
2025-02-22 08:40:55 (646788): Guest Log: -rw-------. 1 atlas atlas      1039 Feb 22 15:40 memory_monitor_summary.json
2025-02-22 08:40:55 (646788): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 22 15:40 agis_ddmendpoints.agis.ALL.json
2025-02-22 08:40:55 (646788): Guest Log: -rw-------. 1 atlas atlas    353700 Feb 22 15:40 log.43078919._085490.job.log.tgz.1
2025-02-22 08:40:55 (646788): Guest Log: -rw-------. 1 atlas atlas      7765 Feb 22 15:40 heartbeat.json
2025-02-22 08:40:55 (646788): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 22 15:40 pilotlog.txt
2025-02-22 08:40:55 (646788): Guest Log: -rw-------. 1 atlas atlas   1207095 Feb 22 15:40 log.43078919._085490.job.log.1
2025-02-22 08:40:55 (646788): Guest Log: -rw-------. 1 atlas atlas       357 Feb 22 15:40 output.list
2025-02-22 08:40:55 (646788): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 22 15:40 runtime_log
2025-02-22 08:40:55 (646788): Guest Log: -rw-------. 1 atlas atlas   1576960 Feb 22 15:40 result.tar.gz
2025-02-22 08:40:55 (646788): Guest Log: -rw-r--r--. 1 atlas atlas     10963 Feb 22 15:40 runtime_log.err
2025-02-22 08:40:55 (646788): Guest Log: -rw-------. 1 atlas atlas       665 Feb 22 15:40 0YkMDmRdq56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmY4sKDmBPGlOo.diag
2025-02-22 08:40:55 (646788): Guest Log: Looking for outputfile HITS.43078919._085490.pool.root.1
2025-02-22 08:40:55 (646788): Guest Log: HITS file was successfully produced
2025-02-22 08:40:55 (646788): Guest Log: -rw-------. 1 atlas atlas 325617939 Feb 22 15:39 /home/atlas/RunAtlas/HITS.43078919._085490.pool.root.1
2025-02-22 08:40:55 (646788): Guest Log: Successfully finished the ATLAS job!
2025-02-22 08:40:55 (646788): Guest Log: Copying the results back to the shared directory!
2025-02-22 08:40:55 (646788): Guest Log:  *** Contents of shared directory: ***
2025-02-22 08:40:55 (646788): Guest Log: total 341868
2025-02-22 08:40:55 (646788): Guest Log: -rw-r--r--. 1 root root 347955296 Feb 22 04:41 ATLAS.root_0
2025-02-22 08:40:55 (646788): Guest Log: -rw-r--r--. 1 root root      6820 Feb 22 04:41 init_data.xml
2025-02-22 08:40:55 (646788): Guest Log: -rw-r--r--. 1 root root    503545 Feb 22 04:41 input.tar.gz
2025-02-22 08:40:55 (646788): Guest Log: -rw-r--r--. 1 root root   1576960 Feb 22 15:40 result.tar.gz
2025-02-22 08:40:55 (646788): Guest Log: -rw-r--r--. 1 root root     17569 Feb 22 04:41 start_atlas.sh
2025-02-22 08:40:55 (646788): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-22 08:40:55 (646788): VM Completion File Detected.
2025-02-22 08:40:55 (646788): Powering off VM.
2025-02-22 08:40:55 (646788): Successfully stopped VM.
2025-02-22 08:40:55 (646788): Deregistering VM. (boinc_8c07c34f985d0c75, slot#4)
2025-02-22 08:40:55 (646788): Removing network bandwidth throttle group from VM.
2025-02-22 08:40:55 (646788): Removing VM from VirtualBox.
08:41:00 (646788): called boinc_finish(0)

</stderr_txt>
]]>

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