Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-22 14:05:07 (7268): Detected: vboxwrapper 26206
2025-02-22 14:05:07 (7268): Detected: BOINC client v8.0.2
2025-02-22 14:05:07 (7268): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-22 14:05:07 (7268): Successfully copied 'init_data.xml' to the shared directory.
2025-02-22 14:05:08 (7268): Create VM. (boinc_10f74687afcbbbf1, slot#2)
2025-02-22 14:05:08 (7268): Setting Memory Size for VM. (4200MB)
2025-02-22 14:05:09 (7268): Setting CPU Count for VM. (2)
2025-02-22 14:05:09 (7268): Setting Chipset Options for VM.
2025-02-22 14:05:09 (7268): Setting Graphics Controller Options for VM.
2025-02-22 14:05:10 (7268): Setting Boot Options for VM.
2025-02-22 14:05:10 (7268): Setting Network Configuration for NAT.
2025-02-22 14:05:10 (7268): Enabling VM Network Access.
2025-02-22 14:05:10 (7268): Disabling USB Support for VM.
2025-02-22 14:05:11 (7268): Disabling COM Port Support for VM.
2025-02-22 14:05:11 (7268): Disabling LPT Port Support for VM.
2025-02-22 14:05:11 (7268): Disabling Audio Support for VM.
2025-02-22 14:05:11 (7268): Disabling Clipboard Support for VM.
2025-02-22 14:05:12 (7268): Disabling Drag and Drop Support for VM.
2025-02-22 14:05:12 (7268): Adding storage controller(s) to VM.
2025-02-22 14:05:12 (7268): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-22 14:05:13 (7268): Adding VirtualBox Guest Additions to VM.
2025-02-22 14:05:13 (7268): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-22 14:05:13 (7268): forwarding host port 51662 to guest port 80
2025-02-22 14:05:14 (7268): Enabling remote desktop for VM.
2025-02-22 14:05:14 (7268): Required extension pack not installed, remote desktop not enabled.
2025-02-22 14:05:14 (7268): Enabling shared directory for VM.
2025-02-22 14:05:15 (7268): Starting VM using VBoxManage interface. (boinc_10f74687afcbbbf1, slot#2)
2025-02-22 14:05:22 (7268): Successfully started VM. (PID = '6660')
2025-02-22 14:05:22 (7268): Reporting VM Process ID to BOINC.
2025-02-22 14:05:22 (7268): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-22 14:05:22 (7268): Guest Log: CPUID EDX: 0x178bfbff
2025-02-22 14:05:22 (7268): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-22 14:05:22 (7268): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-22 14:05:22 (7268): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-22 14:05:22 (7268): Detected: Web Application Enabled (http://localhost:51662)
2025-02-22 14:05:22 (7268): Preference change detected
2025-02-22 14:05:22 (7268): Setting CPU throttle for VM. (100%)
2025-02-22 14:05:22 (7268): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-22 14:05:25 (7268): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-22 14:05:25 (7268): Guest Log: BIOS: Booting from Hard Disk...
2025-02-22 14:05:27 (7268): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-22 14:05:27 (7268): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-22 14:05:27 (7268): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-22 14:05:32 (7268): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-22 14:05:32 (7268): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-22 14:05:38 (7268): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-22 14:05:38 (7268): Guest Log: 00:00:00.000113 main     Log opened 2025-02-22T14:05:36.324251000Z
2025-02-22 14:05:38 (7268): Guest Log: 00:00:00.000189 main     OS Product: Linux
2025-02-22 14:05:38 (7268): Guest Log: 00:00:00.000216 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-22 14:05:38 (7268): Guest Log: 00:00:00.000237 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-22 14:05:38 (7268): Guest Log: 00:00:00.000258 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-22 14:05:38 (7268): Guest Log: 00:00:00.000258 main     Process ID: 1262
2025-02-22 14:05:38 (7268): Guest Log: 00:00:00.000259 main     Package type: LINUX_64BITS_GENERIC
2025-02-22 14:05:38 (7268): Guest Log: 00:00:00.000925 main     5.2.32 r132073 started. Verbose level = 0
2025-02-22 14:05:38 (7268): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-22 14:05:38 (7268): Guest Log: [INFO] Mounting shared directory
2025-02-22 14:05:38 (7268): Guest Log: [INFO] Checking for init_data.xml
2025-02-22 14:05:45 (7268): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-22 14:05:45 (7268): Guest Log: [INFO] Detected branch: prod
2025-02-22 14:05:46 (7268): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-22 14:05:46 (7268): Guest Log: Copying input files
2025-02-22 14:05:47 (7268): Guest Log: Copied input files into RunAtlas.
2025-02-22 14:05:47 (7268): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-22 14:05:47 (7268): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-22 14:05:47 (7268): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-22 14:05:47 (7268): Guest Log: Further information can be found at the LHC@home message board.
2025-02-22 14:05:47 (7268): Guest Log: 00:00:10.002432 timesync vgsvcTimeSyncWorker: Radical guest time change: -39 589 226 348 000ns (GuestNow=1 740 193 547 100 092 000 ns GuestLast=1 740 233 136 326 440 000 ns fSetTimeLastLoop=true )
2025-02-22 14:06:01 (7268): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-22 14:06:01 (7268): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-22 14:06:01 (7268): Guest Log: 2.6.3.0 1539 0 30080 142924 3 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-22 14:06:02 (7268): Guest Log: copied the webapp to /var/www
2025-02-22 14:06:02 (7268): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-22 14:06:02 (7268): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-22 14:06:03 (7268): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-22 14:06:03 (7268): Guest Log:  *** Starting ATLAS job. (PandaID=6522296180 taskID=43078919) ***
2025-02-22 15:45:57 (7268): Status Report: Elapsed Time: '6000.342867'
2025-02-22 15:45:57 (7268): Status Report: CPU Time: '9346.890625'
2025-02-22 17:26:58 (7268): Status Report: Elapsed Time: '12001.113668'
2025-02-22 17:26:58 (7268): Status Report: CPU Time: '21343.328125'
2025-02-22 19:10:32 (7268): Status Report: Elapsed Time: '18001.341726'
2025-02-22 19:10:32 (7268): Status Report: CPU Time: '33581.265625'
2025-02-22 20:59:42 (7268): Status Report: Elapsed Time: '24001.355312'
2025-02-22 20:59:42 (7268): Status Report: CPU Time: '46491.546875'
2025-02-22 22:45:34 (7268): Status Report: Elapsed Time: '30001.736624'
2025-02-22 22:45:34 (7268): Status Report: CPU Time: '59013.187500'
2025-02-23 00:30:12 (7268): Status Report: Elapsed Time: '36002.189941'
2025-02-23 00:30:12 (7268): Status Report: CPU Time: '71392.234375'
2025-02-23 02:12:12 (7268): Status Report: Elapsed Time: '42003.004494'
2025-02-23 02:12:12 (7268): Status Report: CPU Time: '83516.656250'
2025-02-23 03:52:51 (7268): Status Report: Elapsed Time: '48003.331455'
2025-02-23 03:52:51 (7268): Status Report: CPU Time: '95335.859375'
2025-02-23 05:33:57 (7268): Status Report: Elapsed Time: '54003.597660'
2025-02-23 05:33:57 (7268): Status Report: CPU Time: '107346.734375'
2025-02-23 05:47:53 (7268): Guest Log:  *** Job finished ***
2025-02-23 05:47:53 (7268): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-23 05:47:53 (7268): Guest Log: 2025-02-22 18:47:41,084 | INFO     | [job] control thread has finished
2025-02-23 05:47:53 (7268): Guest Log: 2025-02-22 18:47:41,436 | INFO     | [data] copytool_out thread has finished
2025-02-23 05:47:53 (7268): Guest Log: 2025-02-22 18:47:44,584 | INFO     | [data] queue_monitor thread has finished
2025-02-23 05:47:53 (7268): Guest Log: 2025-02-22 18:47:46,587 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140264163608384)>', '<ExcThread(monitor, started 140263431337728)>']
2025-02-23 05:47:53 (7268): Guest Log: 2025-02-22 18:47:47,203 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-23 05:47:53 (7268): Guest Log: 2025-02-22 18:47:47,203 | INFO     | [monitor] control thread has ended
2025-02-23 05:47:53 (7268): Guest Log: 2025-02-22 18:47:51,593 | INFO     | all workflow threads have been joined
2025-02-23 05:47:53 (7268): Guest Log: 2025-02-22 18:47:51,593 | INFO     | end of generic workflow (traces error code: 0)
2025-02-23 05:47:53 (7268): Guest Log: 2025-02-22 18:47:51,593 | INFO     | traces error code: 0
2025-02-23 05:47:53 (7268): Guest Log: 2025-02-22 18:47:51,593 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-23 05:47:53 (7268): Guest Log: 2025-02-22 18:47:51,701 [wrapper] ==== pilot stdout END ====
2025-02-23 05:47:53 (7268): Guest Log: 2025-02-22 18:47:51,704 [wrapper] ==== wrapper stdout RESUME ====
2025-02-23 05:47:53 (7268): Guest Log: 2025-02-22 18:47:51,708 [wrapper] pilotpid: 5858
2025-02-23 05:47:53 (7268): Guest Log: 2025-02-22 18:47:51,711 [wrapper] Pilot exit status: 0
2025-02-23 05:47:53 (7268): Guest Log: 2025-02-22 18:47:52,170 [wrapper] pandaids: 6522296180
2025-02-23 05:47:53 (7268): Guest Log: 2025-02-22 18:47:52,192 [wrapper] cleanup supervisor_pilot 14249 5859
2025-02-23 05:47:53 (7268): Guest Log: 2025-02-22 18:47:52,196 [wrapper] Test setup, not cleaning
2025-02-23 05:47:53 (7268): Guest Log: 2025-02-22 18:47:52,203 [wrapper] apfmon messages muted
2025-02-23 05:47:53 (7268): Guest Log: 2025-02-22 18:47:52,207 [wrapper] ==== wrapper stdout END ====
2025-02-23 05:47:53 (7268): Guest Log: 2025-02-22 18:47:52,210 [wrapper] ==== wrapper stderr END ====
2025-02-23 05:47:53 (7268): Guest Log:  *** Error codes and diagnostics ***
2025-02-23 05:47:53 (7268): Guest Log:     "exeErrorCode": 0,
2025-02-23 05:47:53 (7268): Guest Log:     "exeErrorDiag": "",
2025-02-23 05:47:53 (7268): Guest Log:     "pilotErrorCode": 0,
2025-02-23 05:47:53 (7268): Guest Log:     "pilotErrorDiag": "",
2025-02-23 05:47:53 (7268): Guest Log:  *** Listing of results directory ***
2025-02-23 05:47:53 (7268): Guest Log: total 340512
2025-02-23 05:47:53 (7268): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 21 13:28 pilot3.tar.gz
2025-02-23 05:47:53 (7268): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 21 13:33 runpilot2-wrapper.sh
2025-02-23 05:47:53 (7268): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 21 13:33 queuedata.json
2025-02-23 05:47:53 (7268): Guest Log: -rwxr-xr-x. 1 atlas atlas      9002 Feb 22 03:05 init_data.xml
2025-02-23 05:47:53 (7268): Guest Log: -rwxr-xr-x. 1 atlas atlas    503557 Feb 22 03:05 input.tar.gz
2025-02-23 05:47:53 (7268): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 22 03:05 start_atlas.sh
2025-02-23 05:47:53 (7268): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 22 03:05 EVNT.43078917._002413.pool.root.1 -> /data/./ATLAS.root_0
2025-02-23 05:47:53 (7268): Guest Log: -rw-r--r--. 1 atlas atlas      2546 Feb 22 03:06 pandaJob.out
2025-02-23 05:47:53 (7268): Guest Log: -rw-------. 1 atlas atlas       424 Feb 22 03:06 setup.sh.local
2025-02-23 05:47:53 (7268): Guest Log: -rw-------. 1 atlas atlas    987689 Feb 22 03:07 agis_schedconf.cvmfs.json
2025-02-23 05:47:53 (7268): Guest Log: drwx------. 4 atlas atlas      4096 Feb 22 03:08 pilot3
2025-02-23 05:47:53 (7268): Guest Log: -rw-------. 1 atlas atlas 327636557 Feb 22 18:46 HITS.43078919._083774.pool.root.1
2025-02-23 05:47:53 (7268): Guest Log: -rw-------. 1 atlas atlas        95 Feb 22 18:46 pilot_heartbeat.json
2025-02-23 05:47:53 (7268): Guest Log: -rw-------. 1 atlas atlas      1022 Feb 22 18:47 memory_monitor_summary.json
2025-02-23 05:47:53 (7268): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 22 18:47 agis_ddmendpoints.agis.ALL.json
2025-02-23 05:47:53 (7268): Guest Log: -rw-------. 1 atlas atlas    815721 Feb 22 18:47 log.43078919._083774.job.log.tgz.1
2025-02-23 05:47:53 (7268): Guest Log: -rw-------. 1 atlas atlas      7708 Feb 22 18:47 heartbeat.json
2025-02-23 05:47:53 (7268): Guest Log: -rw-------. 1 atlas atlas      4591 Feb 22 18:47 pilotlog.txt
2025-02-23 05:47:53 (7268): Guest Log: -rw-------. 1 atlas atlas   7835269 Feb 22 18:47 log.43078919._083774.job.log.1
2025-02-23 05:47:53 (7268): Guest Log: -rw-------. 1 atlas atlas       357 Feb 22 18:47 output.list
2025-02-23 05:47:53 (7268): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 22 18:47 runtime_log
2025-02-23 05:47:53 (7268): Guest Log: -rw-------. 1 atlas atlas   8673280 Feb 22 18:47 result.tar.gz
2025-02-23 05:47:53 (7268): Guest Log: -rw-r--r--. 1 atlas atlas     10966 Feb 22 18:47 runtime_log.err
2025-02-23 05:47:53 (7268): Guest Log: -rw-------. 1 atlas atlas       669 Feb 22 18:47 EtbNDmWKi56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmJRdKDmNO7AXo.diag
2025-02-23 05:47:53 (7268): Guest Log: Looking for outputfile HITS.43078919._083774.pool.root.1
2025-02-23 05:47:53 (7268): Guest Log: HITS file was successfully produced
2025-02-23 05:47:53 (7268): Guest Log: -rw-------. 1 atlas atlas 327636557 Feb 22 18:46 /home/atlas/RunAtlas/HITS.43078919._083774.pool.root.1
2025-02-23 05:47:54 (7268): Guest Log: Successfully finished the ATLAS job!
2025-02-23 05:47:54 (7268): Guest Log: Copying the results back to the shared directory!
2025-02-23 05:47:54 (7268): Guest Log:  *** Contents of shared directory: ***
2025-02-23 05:47:54 (7268): Guest Log: total 664924
2025-02-23 05:47:54 (7268): Guest Log: -rwxrwxrwx. 1 root root 344031102 Feb 22 03:05 ATLAS.root_0
2025-02-23 05:47:54 (7268): Guest Log: -rwxrwxrwx. 1 root root 327636557 Feb 22 18:47 HITS.pool.root.1
2025-02-23 05:47:54 (7268): Guest Log: -rwxrwxrwx. 1 root root      9002 Feb 22 03:05 init_data.xml
2025-02-23 05:47:54 (7268): Guest Log: -rwxrwxrwx. 1 root root    503557 Feb 22 02:50 input.tar.gz
2025-02-23 05:47:54 (7268): Guest Log: -rwxrwxrwx. 1 root root   8673280 Feb 22  2025 result.tar.gz
2025-02-23 05:47:54 (7268): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 22 02:50 start_atlas.sh
2025-02-23 05:47:54 (7268): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-23 05:47:54 (7268): VM Completion File Detected.
2025-02-23 05:47:54 (7268): Powering off VM.
2025-02-23 05:47:55 (7268): Successfully stopped VM.
2025-02-23 05:47:55 (7268): Deregistering VM. (boinc_10f74687afcbbbf1, slot#2)
2025-02-23 05:47:55 (7268): Removing network bandwidth throttle group from VM.
2025-02-23 05:47:56 (7268): Removing VM from VirtualBox.
05:48:01 (7268): called boinc_finish(0)

</stderr_txt>
]]>

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