Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-22 14:12:40 (7680): Detected: vboxwrapper 26206
2025-02-22 14:12:40 (7680): Detected: BOINC client v8.0.2
2025-02-22 14:12:40 (7680): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-22 14:12:41 (7680): Successfully copied 'init_data.xml' to the shared directory.
2025-02-22 14:12:41 (7680): Create VM. (boinc_9525568650fcdcd0, slot#6)
2025-02-22 14:12:42 (7680): Setting Memory Size for VM. (4200MB)
2025-02-22 14:12:42 (7680): Setting CPU Count for VM. (2)
2025-02-22 14:12:42 (7680): Setting Chipset Options for VM.
2025-02-22 14:12:42 (7680): Setting Graphics Controller Options for VM.
2025-02-22 14:12:43 (7680): Setting Boot Options for VM.
2025-02-22 14:12:43 (7680): Setting Network Configuration for NAT.
2025-02-22 14:12:43 (7680): Enabling VM Network Access.
2025-02-22 14:12:43 (7680): Disabling USB Support for VM.
2025-02-22 14:12:44 (7680): Disabling COM Port Support for VM.
2025-02-22 14:12:44 (7680): Disabling LPT Port Support for VM.
2025-02-22 14:12:44 (7680): Disabling Audio Support for VM.
2025-02-22 14:12:44 (7680): Disabling Clipboard Support for VM.
2025-02-22 14:12:45 (7680): Disabling Drag and Drop Support for VM.
2025-02-22 14:12:45 (7680): Adding storage controller(s) to VM.
2025-02-22 14:12:45 (7680): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-22 14:12:46 (7680): Adding VirtualBox Guest Additions to VM.
2025-02-22 14:12:46 (7680): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-22 14:12:46 (7680): forwarding host port 51749 to guest port 80
2025-02-22 14:12:46 (7680): Enabling remote desktop for VM.
2025-02-22 14:12:47 (7680): Required extension pack not installed, remote desktop not enabled.
2025-02-22 14:12:47 (7680): Enabling shared directory for VM.
2025-02-22 14:12:47 (7680): Starting VM using VBoxManage interface. (boinc_9525568650fcdcd0, slot#6)
2025-02-22 14:12:54 (7680): Successfully started VM. (PID = '13648')
2025-02-22 14:12:54 (7680): Reporting VM Process ID to BOINC.
2025-02-22 14:12:54 (7680): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-22 14:12:54 (7680): Guest Log: CPUID EDX: 0x178bfbff
2025-02-22 14:12:54 (7680): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-22 14:12:54 (7680): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-22 14:12:54 (7680): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-22 14:12:54 (7680): Detected: Web Application Enabled (http://localhost:51749)
2025-02-22 14:12:54 (7680): Preference change detected
2025-02-22 14:12:54 (7680): Setting CPU throttle for VM. (100%)
2025-02-22 14:12:54 (7680): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-22 14:12:56 (7680): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-22 14:12:56 (7680): Guest Log: BIOS: Booting from Hard Disk...
2025-02-22 14:12:58 (7680): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-22 14:12:58 (7680): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-22 14:12:58 (7680): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-22 14:13:07 (7680): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-22 14:13:07 (7680): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-22 14:13:12 (7680): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-22 14:13:12 (7680): Guest Log: 00:00:00.000079 main     Log opened 2025-02-22T14:13:09.891319000Z
2025-02-22 14:13:12 (7680): Guest Log: 00:00:00.000144 main     OS Product: Linux
2025-02-22 14:13:12 (7680): Guest Log: 00:00:00.000167 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-22 14:13:12 (7680): Guest Log: 00:00:00.000186 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-22 14:13:12 (7680): Guest Log: 00:00:00.000203 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-22 14:13:12 (7680): Guest Log: 00:00:00.000203 main     Process ID: 1260
2025-02-22 14:13:12 (7680): Guest Log: 00:00:00.000204 main     Package type: LINUX_64BITS_GENERIC
2025-02-22 14:13:12 (7680): Guest Log: 00:00:00.000841 main     5.2.32 r132073 started. Verbose level = 0
2025-02-22 14:13:12 (7680): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-22 14:13:12 (7680): Guest Log: [INFO] Mounting shared directory
2025-02-22 14:13:12 (7680): Guest Log: [INFO] Checking for init_data.xml
2025-02-22 14:13:21 (7680): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-22 14:13:21 (7680): Guest Log: [INFO] Detected branch: prod
2025-02-22 14:13:21 (7680): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-22 14:13:21 (7680): Guest Log: Copying input files
2025-02-22 14:13:22 (7680): Guest Log: 00:00:10.005210 timesync vgsvcTimeSyncWorker: Radical guest time change: -39 587 605 549 000ns (GuestNow=1 740 194 002 287 433 000 ns GuestLast=1 740 233 589 892 982 000 ns fSetTimeLastLoop=true )
2025-02-22 14:13:23 (7680): Guest Log: Copied input files into RunAtlas.
2025-02-22 14:13:23 (7680): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-22 14:13:23 (7680): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-22 14:13:23 (7680): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-22 14:13:23 (7680): Guest Log: Further information can be found at the LHC@home message board.
2025-02-22 14:13:36 (7680): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-22 14:13:37 (7680): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-22 14:13:37 (7680): Guest Log: 2.6.3.0 1535 0 30304 142925 4 1 3119916 4096000 0 65024 0 0 n/a 1169 237 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-22 14:13:38 (7680): Guest Log: copied the webapp to /var/www
2025-02-22 14:13:38 (7680): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-22 14:13:38 (7680): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-22 14:13:38 (7680): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-22 14:13:38 (7680): Guest Log:  *** Starting ATLAS job. (PandaID=6522372764 taskID=43078919) ***
2025-02-22 15:53:34 (7680): Status Report: Elapsed Time: '6000.340427'
2025-02-22 15:53:34 (7680): Status Report: CPU Time: '9029.453125'
2025-02-22 17:34:35 (7680): Status Report: Elapsed Time: '12000.545187'
2025-02-22 17:34:35 (7680): Status Report: CPU Time: '21020.875000'
2025-02-22 19:18:47 (7680): Status Report: Elapsed Time: '18001.042227'
2025-02-22 19:18:47 (7680): Status Report: CPU Time: '33345.250000'
2025-02-22 21:07:28 (7680): Status Report: Elapsed Time: '24001.854147'
2025-02-22 21:07:28 (7680): Status Report: CPU Time: '46188.890625'
2025-02-22 22:53:56 (7680): Status Report: Elapsed Time: '30002.762707'
2025-02-22 22:53:56 (7680): Status Report: CPU Time: '58796.015625'
2025-02-23 00:38:12 (7680): Status Report: Elapsed Time: '36003.277258'
2025-02-23 00:38:12 (7680): Status Report: CPU Time: '71142.890625'
2025-02-23 02:19:37 (7680): Status Report: Elapsed Time: '42003.326160'
2025-02-23 02:19:37 (7680): Status Report: CPU Time: '83228.953125'
2025-02-23 04:00:12 (7680): Status Report: Elapsed Time: '48004.062199'
2025-02-23 04:00:12 (7680): Status Report: CPU Time: '95245.312500'
2025-02-23 05:37:41 (7680): Guest Log:  *** Job finished ***
2025-02-23 05:37:41 (7680): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-23 05:37:41 (7680): Guest Log: 2025-02-22 18:37:22,126 | INFO     | [payload] validate_pre thread has finished
2025-02-23 05:37:41 (7680): Guest Log: 2025-02-22 18:37:22,143 | INFO     | [payload] run_realtimelog thread has finished
2025-02-23 05:37:41 (7680): Guest Log: 2025-02-22 18:37:24,998 | INFO     | [data] queue_monitor thread has finished
2025-02-23 05:37:41 (7680): Guest Log: 2025-02-22 18:37:26,162 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139889734821696)>', '<ExcThread(monitor, started 139888980629248)>']
2025-02-23 05:37:41 (7680): Guest Log: 2025-02-22 18:37:26,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-23 05:37:41 (7680): Guest Log: 2025-02-22 18:37:26,716 | INFO     | [monitor] control thread has ended
2025-02-23 05:37:41 (7680): Guest Log: 2025-02-22 18:37:31,168 | INFO     | all workflow threads have been joined
2025-02-23 05:37:41 (7680): Guest Log: 2025-02-22 18:37:31,168 | INFO     | end of generic workflow (traces error code: 0)
2025-02-23 05:37:41 (7680): Guest Log: 2025-02-22 18:37:31,168 | INFO     | traces error code: 0
2025-02-23 05:37:41 (7680): Guest Log: 2025-02-22 18:37:31,169 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-23 05:37:41 (7680): Guest Log: 2025-02-22 18:37:31,275 [wrapper] ==== pilot stdout END ====
2025-02-23 05:37:41 (7680): Guest Log: 2025-02-22 18:37:31,279 [wrapper] ==== wrapper stdout RESUME ====
2025-02-23 05:37:41 (7680): Guest Log: 2025-02-22 18:37:31,283 [wrapper] pilotpid: 5853
2025-02-23 05:37:41 (7680): Guest Log: 2025-02-22 18:37:31,286 [wrapper] Pilot exit status: 0
2025-02-23 05:37:41 (7680): Guest Log: 2025-02-22 18:37:31,714 [wrapper] pandaids: 6522372764
2025-02-23 05:37:41 (7680): Guest Log: 2025-02-22 18:37:31,738 [wrapper] cleanup supervisor_pilot 13914 5854
2025-02-23 05:37:41 (7680): Guest Log: 2025-02-22 18:37:31,742 [wrapper] Test setup, not cleaning
2025-02-23 05:37:41 (7680): Guest Log: 2025-02-22 18:37:31,749 [wrapper] apfmon messages muted
2025-02-23 05:37:41 (7680): Guest Log: 2025-02-22 18:37:31,753 [wrapper] ==== wrapper stdout END ====
2025-02-23 05:37:41 (7680): Guest Log: 2025-02-22 18:37:31,757 [wrapper] ==== wrapper stderr END ====
2025-02-23 05:37:41 (7680): Guest Log:  *** Error codes and diagnostics ***
2025-02-23 05:37:41 (7680): Guest Log:     "exeErrorCode": 0,
2025-02-23 05:37:41 (7680): Guest Log:     "exeErrorDiag": "",
2025-02-23 05:37:41 (7680): Guest Log:     "pilotErrorCode": 0,
2025-02-23 05:37:41 (7680): Guest Log:     "pilotErrorDiag": "",
2025-02-23 05:37:41 (7680): Guest Log:  *** Listing of results directory ***
2025-02-23 05:37:41 (7680): Guest Log: total 341832
2025-02-23 05:37:41 (7680): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 21 16:22 pilot3.tar.gz
2025-02-23 05:37:41 (7680): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 21 16:30 queuedata.json
2025-02-23 05:37:41 (7680): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 21 16:31 runpilot2-wrapper.sh
2025-02-23 05:37:41 (7680): Guest Log: -rwxr-xr-x. 1 atlas atlas      9002 Feb 22 03:13 init_data.xml
2025-02-23 05:37:41 (7680): Guest Log: -rwxr-xr-x. 1 atlas atlas    503554 Feb 22 03:13 input.tar.gz
2025-02-23 05:37:41 (7680): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 22 03:13 start_atlas.sh
2025-02-23 05:37:41 (7680): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 22 03:13 EVNT.43078917._002452.pool.root.1 -> /data/./ATLAS.root_0
2025-02-23 05:37:41 (7680): Guest Log: -rw-r--r--. 1 atlas atlas      2546 Feb 22 03:13 pandaJob.out
2025-02-23 05:37:41 (7680): Guest Log: -rw-------. 1 atlas atlas       424 Feb 22 03:13 setup.sh.local
2025-02-23 05:37:41 (7680): Guest Log: -rw-------. 1 atlas atlas    987681 Feb 22 03:16 agis_schedconf.cvmfs.json
2025-02-23 05:37:41 (7680): Guest Log: drwx------. 4 atlas atlas      4096 Feb 22 03:16 pilot3
2025-02-23 05:37:41 (7680): Guest Log: -rw-------. 1 atlas atlas 328851127 Feb 22 18:36 HITS.43078919._084433.pool.root.1
2025-02-23 05:37:41 (7680): Guest Log: -rw-------. 1 atlas atlas        95 Feb 22 18:36 pilot_heartbeat.json
2025-02-23 05:37:41 (7680): Guest Log: -rw-------. 1 atlas atlas      1022 Feb 22 18:36 memory_monitor_summary.json
2025-02-23 05:37:41 (7680): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 22 18:37 agis_ddmendpoints.agis.ALL.json
2025-02-23 05:37:41 (7680): Guest Log: -rw-------. 1 atlas atlas    794194 Feb 22 18:37 log.43078919._084433.job.log.tgz.1
2025-02-23 05:37:41 (7680): Guest Log: -rw-------. 1 atlas atlas      7708 Feb 22 18:37 heartbeat.json
2025-02-23 05:37:41 (7680): Guest Log: -rw-------. 1 atlas atlas      4398 Feb 22 18:37 pilotlog.txt
2025-02-23 05:37:41 (7680): Guest Log: -rw-------. 1 atlas atlas   7929396 Feb 22 18:37 log.43078919._084433.job.log.1
2025-02-23 05:37:41 (7680): Guest Log: -rw-------. 1 atlas atlas       357 Feb 22 18:37 output.list
2025-02-23 05:37:41 (7680): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 22 18:37 runtime_log
2025-02-23 05:37:41 (7680): Guest Log: -rw-------. 1 atlas atlas   8744960 Feb 22 18:37 result.tar.gz
2025-02-23 05:37:41 (7680): Guest Log: -rw-r--r--. 1 atlas atlas     10966 Feb 22 18:37 runtime_log.err
2025-02-23 05:37:41 (7680): Guest Log: -rw-------. 1 atlas atlas       669 Feb 22 18:37 CnwLDmF7k56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm7csKDm055Kgn.diag
2025-02-23 05:37:41 (7680): Guest Log: Looking for outputfile HITS.43078919._084433.pool.root.1
2025-02-23 05:37:41 (7680): Guest Log: HITS file was successfully produced
2025-02-23 05:37:41 (7680): Guest Log: -rw-------. 1 atlas atlas 328851127 Feb 22 18:36 /home/atlas/RunAtlas/HITS.43078919._084433.pool.root.1
2025-02-23 05:37:43 (7680): Guest Log: Successfully finished the ATLAS job!
2025-02-23 05:37:43 (7680): Guest Log: Copying the results back to the shared directory!
2025-02-23 05:37:43 (7680): Guest Log:  *** Contents of shared directory: ***
2025-02-23 05:37:43 (7680): Guest Log: total 668332
2025-02-23 05:37:43 (7680): Guest Log: -rwxrwxrwx. 1 root root 346235093 Feb 22 03:12 ATLAS.root_0
2025-02-23 05:37:43 (7680): Guest Log: -rwxrwxrwx. 1 root root 328851127 Feb 22  2025 HITS.pool.root.1
2025-02-23 05:37:43 (7680): Guest Log: -rwxrwxrwx. 1 root root      9002 Feb 22 03:12 init_data.xml
2025-02-23 05:37:43 (7680): Guest Log: -rwxrwxrwx. 1 root root    503554 Feb 22 02:53 input.tar.gz
2025-02-23 05:37:43 (7680): Guest Log: -rwxrwxrwx. 1 root root   8744960 Feb 22  2025 result.tar.gz
2025-02-23 05:37:43 (7680): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 22 02:53 start_atlas.sh
2025-02-23 05:37:43 (7680): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-23 05:37:43 (7680): VM Completion File Detected.
2025-02-23 05:37:43 (7680): Powering off VM.
2025-02-23 05:37:44 (7680): Successfully stopped VM.
2025-02-23 05:37:44 (7680): Deregistering VM. (boinc_9525568650fcdcd0, slot#6)
2025-02-23 05:37:44 (7680): Removing network bandwidth throttle group from VM.
2025-02-23 05:37:44 (7680): Removing VM from VirtualBox.
05:37:50 (7680): called boinc_finish(0)

</stderr_txt>
]]>

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