Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:46:34 (3642510): wrapper (7.7.26015): starting
02:46:34 (3642510): wrapper: running run_atlas (--nthreads 4)
[2025-02-24 02:46:34] Arguments: --nthreads 4
[2025-02-24 02:46:34] Threads: 4
[2025-02-24 02:46:34] Checking for CVMFS
[2025-02-24 02:46:34] No cvmfs_config command found, will try listing directly
[2025-02-24 02:46:34] CVMFS is ok
[2025-02-24 02:46:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-24 02:46:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-24 02:46:34] Further information can be found at the LHC@home message board.
[2025-02-24 02:46:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-24 02:46:34] Checking for apptainer binary...
[2025-02-24 02:46:34] which: no apptainer in ((null))
[2025-02-24 02:46:34] apptainer is not installed, using version from CVMFS
[2025-02-24 02:46:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-24 02:46:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-02-24 02:46:35] apptainer works
[2025-02-24 02:46:35] Set ATHENA_PROC_NUMBER=4
[2025-02-24 02:46:35] Set ATHENA_CORE_NUMBER=4
[2025-02-24 02:46:35] Starting ATLAS job with PandaID=6522296115
[2025-02-24 02:46:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-24 09:35:10]  *** The last 200 lines of the pilot log: ***
[2025-02-24 09:35:10] 2025-02-24 08:34:34,169 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-24 09:35:10] 2025-02-24 08:34:34,169 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-24 09:35:10] 2025-02-24 08:34:34,177 | INFO     | fitting pss+swap vs Time
[2025-02-24 09:35:10] 2025-02-24 08:34:34,177 | INFO     | model: linear, x: [1740361631.0, 1740361692.0, 1740361753.0, 1740361814.0, 1740361875.0, 1740361936.0, 1740361997.0, 1740362058.0, 1740362119.0, 1740362180.0, 1740
[2025-02-24 09:35:10] 2025-02-24 08:34:34,178 | INFO     | sum of square deviations: 19994421400.0
[2025-02-24 09:35:10] 2025-02-24 08:34:34,182 | INFO     | sum of deviations: 194959796884.00006
[2025-02-24 09:35:10] 2025-02-24 08:34:34,182 | INFO     | mean x: 1740373831.0
[2025-02-24 09:35:10] 2025-02-24 08:34:34,183 | INFO     | mean y: 2339925.034912718
[2025-02-24 09:35:10] 2025-02-24 08:34:34,183 | INFO     | -- intersect: -16967539913.247833
[2025-02-24 09:35:10] 2025-02-24 08:34:34,183 | INFO     | intersect: -16967539913.247833
[2025-02-24 09:35:10] 2025-02-24 08:34:34,183 | INFO     | chi2: 4.798649088912456
[2025-02-24 09:35:10] 2025-02-24 08:34:34,184 | INFO     | model: linear, x: [1740361631.0, 1740361692.0, 1740361753.0, 1740361814.0, 1740361875.0, 1740361936.0, 1740361997.0, 1740362058.0, 1740362119.0, 1740362180.0, 1740
[2025-02-24 09:35:10] 2025-02-24 08:34:34,184 | INFO     | sum of square deviations: 19255784295.0
[2025-02-24 09:35:10] 2025-02-24 08:34:34,188 | INFO     | sum of deviations: 217620392620.00003
[2025-02-24 09:35:10] 2025-02-24 08:34:34,188 | INFO     | mean x: 1740373678.5
[2025-02-24 09:35:10] 2025-02-24 08:34:34,189 | INFO     | mean y: 2344549.883838384
[2025-02-24 09:35:10] 2025-02-24 08:34:34,189 | INFO     | -- intersect: -19666592192.36189
[2025-02-24 09:35:10] 2025-02-24 08:34:34,189 | INFO     | intersect: -19666592192.36189
[2025-02-24 09:35:10] 2025-02-24 08:34:34,189 | INFO     | chi2: 4.020566745097678
[2025-02-24 09:35:10] 2025-02-24 08:34:34,189 | INFO     | current chi2=4.020566745097678 (change=16.21461226686861 %)
[2025-02-24 09:35:10] 2025-02-24 08:34:34,190 | INFO     | right removable region: 395
[2025-02-24 09:35:10] 2025-02-24 08:34:34,190 | INFO     | model: linear, x: [1740361936.0, 1740361997.0, 1740362058.0, 1740362119.0, 1740362180.0, 1740362241.0, 1740362302.0, 1740362363.0, 1740362424.0, 1740362485.0, 1740
[2025-02-24 09:35:10] 2025-02-24 08:34:34,191 | INFO     | sum of square deviations: 19255784295.0
[2025-02-24 09:35:10] 2025-02-24 08:34:34,195 | INFO     | sum of deviations: 98806679155.5
[2025-02-24 09:35:10] 2025-02-24 08:34:34,195 | INFO     | mean x: 1740373983.5
[2025-02-24 09:35:10] 2025-02-24 08:34:34,195 | INFO     | mean y: 2359746.9318181816
[2025-02-24 09:35:10] 2025-02-24 08:34:34,195 | INFO     | -- intersect: -8927973661.659367
[2025-02-24 09:35:10] 2025-02-24 08:34:34,195 | INFO     | intersect: -8927973661.659367
[2025-02-24 09:35:10] 2025-02-24 08:34:34,196 | INFO     | chi2: 2.333257686403559
[2025-02-24 09:35:10] 2025-02-24 08:34:34,196 | INFO     | current chi2=2.333257686403559 (change=51.3767803568992 %)
[2025-02-24 09:35:10] 2025-02-24 08:34:34,197 | INFO     | model: linear, x: [1740362241.0, 1740362302.0, 1740362363.0, 1740362424.0, 1740362485.0, 1740362546.0, 1740362607.0, 1740362668.0, 1740362729.0, 1740362790.0, 1740
[2025-02-24 09:35:10] 2025-02-24 08:34:34,197 | INFO     | sum of square deviations: 18535566140.0
[2025-02-24 09:35:10] 2025-02-24 08:34:34,201 | INFO     | sum of deviations: 22617566579.999992
[2025-02-24 09:35:10] 2025-02-24 08:34:34,201 | INFO     | mean x: 1740374136.0
[2025-02-24 09:35:10] 2025-02-24 08:34:34,201 | INFO     | mean y: 2375879.347826087
[2025-02-24 09:35:10] 2025-02-24 08:34:34,201 | INFO     | -- intersect: -2121272656.5414565
[2025-02-24 09:35:10] 2025-02-24 08:34:34,201 | INFO     | intersect: -2121272656.5414565
[2025-02-24 09:35:10] 2025-02-24 08:34:34,202 | INFO     | chi2: 0.9167025724554277
[2025-02-24 09:35:10] 2025-02-24 08:34:34,202 | INFO     | current chi2=0.9167025724554277 (change=60.71147315629691 %)
[2025-02-24 09:35:10] 2025-02-24 08:34:34,203 | INFO     | model: linear, x: [1740362546.0, 1740362607.0, 1740362668.0, 1740362729.0, 1740362790.0, 1740362851.0, 1740362912.0, 1740362973.0, 1740363034.0, 1740363095.0, 1740
[2025-02-24 09:35:10] 2025-02-24 08:34:34,203 | INFO     | sum of square deviations: 17833534372.5
[2025-02-24 09:35:10] 2025-02-24 08:34:34,207 | INFO     | sum of deviations: 4506782022.5
[2025-02-24 09:35:10] 2025-02-24 08:34:34,207 | INFO     | mean x: 1740374288.5
[2025-02-24 09:35:10] 2025-02-24 08:34:34,207 | INFO     | mean y: 2379798.054404145
[2025-02-24 09:35:10] 2025-02-24 08:34:34,207 | INFO     | -- intersect: -437436975.8952393
[2025-02-24 09:35:10] 2025-02-24 08:34:34,207 | INFO     | intersect: -437436975.8952393
[2025-02-24 09:35:10] 2025-02-24 08:34:34,208 | INFO     | chi2: 0.8161956510377781
[2025-02-24 09:35:10] 2025-02-24 08:34:34,208 | INFO     | current chi2=0.8161956510377781 (change=10.963961969522726 %)
[2025-02-24 09:35:10] 2025-02-24 08:34:34,208 | INFO     | left removable region: 30
[2025-02-24 09:35:10] 2025-02-24 08:34:34,209 | INFO     | model: linear, x: [1740363461.0, 1740363522.0, 1740363583.0, 1740363644.0, 1740363705.0, 1740363766.0, 1740363827.0, 1740363888.0, 1740363949.0, 1740364010.0, 1740
[2025-02-24 09:35:10] 2025-02-24 08:34:34,209 | INFO     | sum of square deviations: 15078347830.0
[2025-02-24 09:35:10] 2025-02-24 08:34:34,213 | INFO     | sum of deviations: 28198197025.0
[2025-02-24 09:35:10] 2025-02-24 08:34:34,213 | INFO     | mean x: 1740374563.0
[2025-02-24 09:35:10] 2025-02-24 08:34:34,213 | INFO     | mean y: 2385128.6356164385
[2025-02-24 09:35:10] 2025-02-24 08:34:34,213 | INFO     | -- intersect: -3252309973.1136236
[2025-02-24 09:35:10] 2025-02-24 08:34:34,213 | INFO     | intersect: -3252309973.1136236
[2025-02-24 09:35:10] 2025-02-24 08:34:34,214 | INFO     | chi2: 0.004067038728451256
[2025-02-24 09:35:10] 2025-02-24 08:34:34,214 | INFO     | -- intersect: -3252309973.1136236
[2025-02-24 09:35:10] 2025-02-24 08:34:34,214 | INFO     | current memory leak: 1.87 B/s (using 365 data points, chi2=0.00)
[2025-02-24 09:35:10] 2025-02-24 08:34:34,215 | INFO     | ..............................
[2025-02-24 09:35:10] 2025-02-24 08:34:34,215 | INFO     | . Timing measurements:
[2025-02-24 09:35:10] 2025-02-24 08:34:34,215 | INFO     | . get job = 0 s
[2025-02-24 09:35:10] 2025-02-24 08:34:34,215 | INFO     | . initial setup = 1 s
[2025-02-24 09:35:10] 2025-02-24 08:34:34,215 | INFO     | . payload setup = 5 s
[2025-02-24 09:35:10] 2025-02-24 08:34:34,215 | INFO     | . stage-in = 0 s
[2025-02-24 09:35:10] 2025-02-24 08:34:34,215 | INFO     | . payload execution = 24435 s
[2025-02-24 09:35:10] 2025-02-24 08:34:34,216 | INFO     | . stage-out = 1 s
[2025-02-24 09:35:10] 2025-02-24 08:34:34,216 | INFO     | . log creation = 0 s
[2025-02-24 09:35:10] 2025-02-24 08:34:34,216 | INFO     | ..............................
[2025-02-24 09:35:10] 2025-02-24 08:34:34,622 | INFO     | 
[2025-02-24 09:35:10] 2025-02-24 08:34:34,623 | INFO     | job summary report
[2025-02-24 09:35:10] 2025-02-24 08:34:34,623 | INFO     | --------------------------------------------------
[2025-02-24 09:35:10] 2025-02-24 08:34:34,623 | INFO     | PanDA job id: 6522296115
[2025-02-24 09:35:10] 2025-02-24 08:34:34,623 | INFO     | task id: 43078919
[2025-02-24 09:35:10] 2025-02-24 08:34:34,623 | INFO     | errors: (none)
[2025-02-24 09:35:10] 2025-02-24 08:34:34,623 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-24 09:35:10] 2025-02-24 08:34:34,623 | INFO     | pilot state: finished 
[2025-02-24 09:35:10] 2025-02-24 08:34:34,623 | INFO     | transexitcode: 0
[2025-02-24 09:35:10] 2025-02-24 08:34:34,624 | INFO     | exeerrorcode: 0
[2025-02-24 09:35:10] 2025-02-24 08:34:34,624 | INFO     | exeerrordiag: 
[2025-02-24 09:35:10] 2025-02-24 08:34:34,624 | INFO     | exitcode: 0
[2025-02-24 09:35:10] 2025-02-24 08:34:34,624 | INFO     | exitmsg: OK
[2025-02-24 09:35:10] 2025-02-24 08:34:34,624 | INFO     | cpuconsumptiontime: 93604 s
[2025-02-24 09:35:10] 2025-02-24 08:34:34,624 | INFO     | nevents: 400
[2025-02-24 09:35:10] 2025-02-24 08:34:34,624 | INFO     | neventsw: 0
[2025-02-24 09:35:10] 2025-02-24 08:34:34,624 | INFO     | pid: 3653293
[2025-02-24 09:35:10] 2025-02-24 08:34:34,624 | INFO     | pgrp: 3653293
[2025-02-24 09:35:10] 2025-02-24 08:34:34,624 | INFO     | corecount: 4
[2025-02-24 09:35:10] 2025-02-24 08:34:34,624 | INFO     | event service: False
[2025-02-24 09:35:10] 2025-02-24 08:34:34,624 | INFO     | sizes: {0: 2383151, 1: 2383350, 5: 2383556, 11: 2383612, 24444: 2418639, 24446: 2427602, 24448: 2427786, 24453: 2427956}
[2025-02-24 09:35:10] 2025-02-24 08:34:34,625 | INFO     | --------------------------------------------------
[2025-02-24 09:35:10] 2025-02-24 08:34:34,625 | INFO     | 
[2025-02-24 09:35:10] 2025-02-24 08:34:34,625 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-02-24 09:35:10] 2025-02-24 08:34:34,645 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-24 09:35:10] 2025-02-24 08:34:34,646 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-24 09:35:10] 2025-02-24 08:34:34,646 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-24 09:35:10] 2025-02-24 08:34:34,646 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-24 09:35:10] 2025-02-24 08:34:34,646 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-24 09:35:10] 2025-02-24 08:34:34,646 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-24 09:35:10] 2025-02-24 08:34:34,646 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-24 09:35:10] 2025-02-24 08:34:34,646 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-24 09:35:10] 2025-02-24 08:34:34,646 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-24 09:35:10] 2025-02-24 08:34:34,647 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-24 09:35:10] 2025-02-24 08:34:34,647 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-24 09:35:10] 2025-02-24 08:34:34,647 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-24 09:35:10] 2025-02-24 08:34:34,647 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-24 09:35:10] 2025-02-24 08:34:34,647 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-24 09:35:10] 2025-02-24 08:34:34,647 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-24 09:35:10] 2025-02-24 08:34:34,647 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-24 09:35:10] 2025-02-24 08:34:34,647 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-24 09:35:10] 2025-02-24 08:34:34,647 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-24 09:35:10] 2025-02-24 08:34:34,647 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-24 09:35:10] 2025-02-24 08:34:34,648 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-24 09:35:10] 2025-02-24 08:34:34,648 | INFO     | job 6522296115 has completed (purged errors)
[2025-02-24 09:35:10] 2025-02-24 08:34:34,648 | INFO     | overall cleanup function is called
[2025-02-24 09:35:10] 2025-02-24 08:34:35,656 | INFO     | --- collectZombieJob: --- 10, [3653293]
[2025-02-24 09:35:10] 2025-02-24 08:34:35,656 | INFO     | zombie collector waiting for pid 3653293
[2025-02-24 09:35:10] 2025-02-24 08:34:35,656 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-24 09:35:10] 2025-02-24 08:34:35,656 | INFO     | collected zombie processes
[2025-02-24 09:35:10] 2025-02-24 08:34:35,656 | INFO     | will attempt to kill all subprocesses of pid=3653293
[2025-02-24 09:35:10] 2025-02-24 08:34:35,848 | INFO     | process IDs to be killed: [3653293] (in reverse order)
[2025-02-24 09:35:10] 2025-02-24 08:34:35,969 | WARNING  | found no corresponding commands to process id(s)
[2025-02-24 09:35:10] 2025-02-24 08:34:35,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-24 09:35:10] 2025-02-24 08:34:35,981 | INFO     | did not find any defunct processes belonging to 3653293
[2025-02-24 09:35:10] 2025-02-24 08:34:35,992 | INFO     | did not find any defunct processes belonging to 3653293
[2025-02-24 09:35:10] 2025-02-24 08:34:35,992 | INFO     | ready for new job
[2025-02-24 09:35:10] 2025-02-24 08:34:35,992 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-24 09:35:10] 2025-02-24 08:34:35,995 | INFO     | **************************************
[2025-02-24 09:35:10] 2025-02-24 08:34:35,996 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-24 09:35:10] 2025-02-24 08:34:35,996 | INFO     | **************************************
[2025-02-24 09:35:10] 2025-02-24 08:34:35,996 | INFO     | 
[2025-02-24 09:35:10] 2025-02-24 08:34:36,000 | INFO     | architecture information:
[2025-02-24 09:35:10] 2025-02-24 08:34:36,000 | INFO     | executing command: cat /etc/os-release
[2025-02-24 09:35:10] 2025-02-24 08:34:36,018 | INFO     | cat /etc/os-release:
[2025-02-24 09:35:10] NAME="CentOS Linux"
[2025-02-24 09:35:10] VERSION="7 (Core)"
[2025-02-24 09:35:10] ID="centos"
[2025-02-24 09:35:10] ID_LIKE="rhel fedora"
[2025-02-24 09:35:10] VERSION_ID="7"
[2025-02-24 09:35:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-24 09:35:10] ANSI_COLOR="0;31"
[2025-02-24 09:35:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-24 09:35:10] HOME_URL="https://www.centos.org/"
[2025-02-24 09:35:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-24 09:35:10] 
[2025-02-24 09:35:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-24 09:35:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-24 09:35:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-24 09:35:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-24 09:35:10] 
[2025-02-24 09:35:10] 2025-02-24 08:34:36,019 | INFO     | **************************************
[2025-02-24 09:35:10] 2025-02-24 08:34:36,522 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-02-24 09:35:10] 2025-02-24 08:34:36,540 | INFO     | sufficient remaining disk space (628169375744 B)
[2025-02-24 09:35:10] 2025-02-24 08:34:36,540 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-24 09:35:10] 2025-02-24 08:34:36,541 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-24 09:35:10] 2025-02-24 08:34:36,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-24 09:35:10] 2025-02-24 08:34:36,541 | INFO     | aborting loop
[2025-02-24 09:35:10] 2025-02-24 08:34:37,059 | INFO     | all data control threads have been joined
[2025-02-24 09:35:10] 2025-02-24 08:34:37,060 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-24 09:35:10] 2025-02-24 08:34:37,212 | INFO     | found 0 job(s) in 20 queues
[2025-02-24 09:35:10] 2025-02-24 08:34:37,213 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-24 09:35:10] 2025-02-24 08:34:37,213 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-24 09:35:10] 2025-02-24 08:34:37,259 | INFO     | all payload control threads have been joined
[2025-02-24 09:35:10] 2025-02-24 08:34:37,543 | INFO     | [job] job monitor thread has finished
[2025-02-24 09:35:10] 2025-02-24 08:34:37,545 | INFO     | [job] retrieve thread has finished
[2025-02-24 09:35:10] 2025-02-24 08:34:37,556 | INFO     | all job control threads have been joined
[2025-02-24 09:35:10] 2025-02-24 08:34:37,871 | INFO     | [data] copytool_in thread has finished
[2025-02-24 09:35:10] 2025-02-24 08:34:38,065 | INFO     | [data] control thread has finished
[2025-02-24 09:35:10] 2025-02-24 08:34:38,108 | INFO     | [payload] execute_payloads thread has finished
[2025-02-24 09:35:10] 2025-02-24 08:34:38,242 | INFO     | [payload] failed_post thread has finished
[2025-02-24 09:35:10] 2025-02-24 08:34:38,264 | INFO     | [payload] control thread has finished
[2025-02-24 09:35:10] 2025-02-24 08:34:38,411 | INFO     | [job] create_data_payload thread has finished
[2025-02-24 09:35:10] 2025-02-24 08:34:38,561 | INFO     | [job] control thread has finished
[2025-02-24 09:35:10] 2025-02-24 08:34:38,592 | INFO     | [job] validate thread has finished
[2025-02-24 09:35:10] 2025-02-24 08:34:38,981 | INFO     | [payload] validate_pre thread has finished
[2025-02-24 09:35:10] 2025-02-24 08:34:39,010 | INFO     | [payload] validate_post thread has finished
[2025-02-24 09:35:10] 2025-02-24 08:34:39,065 | INFO     | [data] copytool_out thread has finished
[2025-02-24 09:35:10] 2025-02-24 08:34:39,285 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-24 09:35:10] 2025-02-24 08:34:39,332 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-24 09:35:10] 2025-02-24 08:34:40,334 | INFO     | [job] queue monitor thread has finished
[2025-02-24 09:35:10] 2025-02-24 08:34:43,291 | INFO     | [data] queue_monitor thread has finished
[2025-02-24 09:35:10] 2025-02-24 08:34:47,274 | INFO     | job.realtimelogging is not enabled
[2025-02-24 09:35:10] 2025-02-24 08:34:48,279 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-24 09:35:10] 2025-02-24 08:34:49,718 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23229652072256)>', '<ExcThread(monitor, started 23229408163584)>']
[2025-02-24 09:35:10] 2025-02-24 08:34:50,271 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-24 09:35:10] 2025-02-24 08:34:50,271 | INFO     | [monitor] control thread has ended
[2025-02-24 09:35:10] 2025-02-24 08:34:54,743 | INFO     | all workflow threads have been joined
[2025-02-24 09:35:10] 2025-02-24 08:34:54,743 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-24 09:35:10] 2025-02-24 08:34:54,743 | INFO     | traces error code: 0
[2025-02-24 09:35:10] 2025-02-24 08:34:54,744 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-24 09:35:10] 2025-02-24 08:34:54,900 [wrapper] ==== pilot stdout END ====
[2025-02-24 09:35:10] 2025-02-24 08:34:54,903 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-24 09:35:10] 2025-02-24 08:34:54,906 [wrapper] pilotpid: 3646219
[2025-02-24 09:35:10] 2025-02-24 08:34:54,908 [wrapper] Pilot exit status: 0
[2025-02-24 09:35:10] 2025-02-24 08:34:54,919 [wrapper] pandaids: 6522296115
[2025-02-24 09:35:10] 2025-02-24 08:34:54,992 [wrapper] cleanup supervisor_pilot  121889 3646220
[2025-02-24 09:35:10] 2025-02-24 08:34:54,995 [wrapper] Test setup, not cleaning
[2025-02-24 09:35:10] 2025-02-24 08:34:55,000 [wrapper] apfmon messages muted
[2025-02-24 09:35:10] 2025-02-24 08:34:55,003 [wrapper] ==== wrapper stdout END ====
[2025-02-24 09:35:10] 2025-02-24 08:34:55,006 [wrapper] ==== wrapper stderr END ====
[2025-02-24 09:35:10]  *** Error codes and diagnostics ***
[2025-02-24 09:35:10]     "exeErrorCode": 0,
[2025-02-24 09:35:10]     "exeErrorDiag": "",
[2025-02-24 09:35:10]     "pilotErrorCode": 0,
[2025-02-24 09:35:10]     "pilotErrorDiag": "",
[2025-02-24 09:35:10]  *** Listing of results directory ***
[2025-02-24 09:35:10] total 668672
[2025-02-24 09:35:10] -rw-r--r-- 1 boinc boinc    491065 Feb 21 13:55 pilot3.tar.gz
[2025-02-24 09:35:10] -rw-r--r-- 1 boinc boinc      5118 Feb 21 14:24 queuedata.json
[2025-02-24 09:35:10] -rwx------ 1 boinc boinc     35865 Feb 21 14:26 runpilot2-wrapper.sh
[2025-02-24 09:35:10] -rw-r--r-- 1 boinc boinc       100 Feb 24 02:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-24 09:35:10] -rwxr-xr-x 1 boinc boinc      7986 Feb 24 02:46 run_atlas
[2025-02-24 09:35:10] -rw-r--r-- 1 boinc boinc       105 Feb 24 02:46 job.xml
[2025-02-24 09:35:10] -rw-r--r-- 2 boinc boinc 342601334 Feb 24 02:46 EVNT.43078917._002407.pool.root.1
[2025-02-24 09:35:10] -rw-r--r-- 1 boinc boinc      6634 Feb 24 02:46 init_data.xml
[2025-02-24 09:35:10] -rw-r--r-- 2 boinc boinc     17569 Feb 24 02:46 start_atlas.sh
[2025-02-24 09:35:10] drwxrwx--x 2 boinc boinc      4096 Feb 24 02:46 shared
[2025-02-24 09:35:10] -rw-r--r-- 2 boinc boinc    503562 Feb 24 02:46 input.tar.gz
[2025-02-24 09:35:10] -rw-r--r-- 1 boinc boinc         0 Feb 24 02:46 boinc_lockfile
[2025-02-24 09:35:10] -rw-r--r-- 1 boinc boinc      2546 Feb 24 02:46 pandaJob.out
[2025-02-24 09:35:10] -rw------- 1 boinc boinc       424 Feb 24 02:46 setup.sh.local
[2025-02-24 09:35:10] -rw------- 1 boinc boinc    987744 Feb 24 02:46 agis_schedconf.cvmfs.json
[2025-02-24 09:35:10] drwx------ 4 boinc boinc      4096 Feb 24 02:46 pilot3
[2025-02-24 09:35:10] -rw------- 1 boinc boinc 331487374 Feb 24 09:33 HITS.43078919._083709.pool.root.1
[2025-02-24 09:35:10] -rw-r--r-- 1 boinc boinc       529 Feb 24 09:33 boinc_task_state.xml
[2025-02-24 09:35:10] -rw------- 1 boinc boinc        95 Feb 24 09:34 pilot_heartbeat.json
[2025-02-24 09:35:10] -rw------- 1 boinc boinc      1039 Feb 24 09:34 memory_monitor_summary.json
[2025-02-24 09:35:10] -rw------- 1 boinc boinc   1582569 Feb 24 09:34 agis_ddmendpoints.agis.ALL.json
[2025-02-24 09:35:10] -rw------- 1 boinc boinc    481148 Feb 24 09:34 log.43078919._083709.job.log.tgz.1
[2025-02-24 09:35:10] -rw------- 1 boinc boinc      7756 Feb 24 09:34 heartbeat.json
[2025-02-24 09:35:10] -rw------- 1 boinc boinc      4297 Feb 24 09:34 pilotlog.txt
[2025-02-24 09:35:10] -rw------- 1 boinc boinc   2928951 Feb 24 09:34 log.43078919._083709.job.log.1
[2025-02-24 09:35:10] -rw------- 1 boinc boinc       357 Feb 24 09:34 output.list
[2025-02-24 09:35:10] -rw-r--r-- 1 boinc boinc       620 Feb 24 09:34 runtime_log
[2025-02-24 09:35:10] -rw------- 1 boinc boinc   3430400 Feb 24 09:34 result.tar.gz
[2025-02-24 09:35:10] -rw-r--r-- 1 boinc boinc     11424 Feb 24 09:34 runtime_log.err
[2025-02-24 09:35:10] -rw------- 1 boinc boinc       665 Feb 24 09:34 dSDMDmfDi56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmiNsKDmXxrb0m.diag
[2025-02-24 09:35:10] -rw-r--r-- 1 boinc boinc        27 Feb 24 09:35 wrapper_checkpoint.txt
[2025-02-24 09:35:10] -rw-r--r-- 1 boinc boinc      8192 Feb 24 09:35 boinc_mmap_file
[2025-02-24 09:35:10] -rw-r--r-- 1 boinc boinc     21285 Feb 24 09:35 stderr.txt
[2025-02-24 09:35:10] HITS file was successfully produced:
[2025-02-24 09:35:10] -rw------- 1 boinc boinc 331487374 Feb 24 09:33 shared/HITS.pool.root.1
[2025-02-24 09:35:10]  *** Contents of shared directory: ***
[2025-02-24 09:35:10] total 662164
[2025-02-24 09:35:10] -rw-r--r-- 2 boinc boinc 342601334 Feb 24 02:46 ATLAS.root_0
[2025-02-24 09:35:10] -rw-r--r-- 2 boinc boinc     17569 Feb 24 02:46 start_atlas.sh
[2025-02-24 09:35:10] -rw-r--r-- 2 boinc boinc    503562 Feb 24 02:46 input.tar.gz
[2025-02-24 09:35:10] -rw------- 1 boinc boinc 331487374 Feb 24 09:33 HITS.pool.root.1
[2025-02-24 09:35:10] -rw------- 1 boinc boinc   3430400 Feb 24 09:34 result.tar.gz
09:35:12 (3642510): run_atlas exited; CPU time 93664.814658
09:35:12 (3642510): called boinc_finish(0)

</stderr_txt>
]]>

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