Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:31:39 (21502): wrapper (7.7.26015): starting
19:31:39 (21502): wrapper: running run_atlas (--nthreads 10)
[2025-02-21 19:31:39] Arguments: --nthreads 10
[2025-02-21 19:31:39] Threads: 10
[2025-02-21 19:31:39] Checking for CVMFS
[2025-02-21 19:31:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-21 19:31:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-21 19:31:41] Running cvmfs_config stat atlas.cern.ch
[2025-02-21 19:31:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-21 19:31:42] 2.11.2.0 25770 20077 235368 142921 0 64 11897117 18432001 10898 130560 0 41769655 98.466 131070184 39919 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-21 19:31:42] CVMFS is ok
[2025-02-21 19:31:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-21 19:31:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-21 19:31:42] Further information can be found at the LHC@home message board.
[2025-02-21 19:31:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-21 19:31:42] Checking for apptainer binary...
[2025-02-21 19:31:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-21 19:31:42] Running /usr/bin/apptainer --version
[2025-02-21 19:31:43] apptainer version 1.3.2-1.el7
[2025-02-21 19:31:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-21 19:32:01] c-211-24.aglt2.org
[2025-02-21 19:32:01] apptainer works
[2025-02-21 19:32:01] Set ATHENA_PROC_NUMBER=10
[2025-02-21 19:32:01] Set ATHENA_CORE_NUMBER=10
[2025-02-21 19:32:01] Starting ATLAS job with PandaID=6522500101
[2025-02-21 19:32:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 16:34:52]  *** The last 200 lines of the pilot log: ***
[2025-02-22 16:34:52] 2025-02-22 21:34:32,738 | INFO     | model: linear, x: [1740184650.0, 1740184711.0, 1740184772.0, 1740184833.0, 1740184894.0, 1740184955.0, 1740185016.0, 1740185077.0, 1740185138.0, 1740185199.0, 1740
[2025-02-22 16:34:52] 2025-02-22 21:34:32,739 | INFO     | sum of square deviations: 578427860746.3363
[2025-02-22 16:34:52] 2025-02-22 21:34:32,779 | INFO     | sum of deviations: 1499170525411.35
[2025-02-22 16:34:52] 2025-02-22 21:34:32,780 | INFO     | mean x: 1740222165.6043866
[2025-02-22 16:34:52] 2025-02-22 21:34:32,780 | INFO     | mean y: 2642084.4914703495
[2025-02-22 16:34:52] 2025-02-22 21:34:32,780 | INFO     | -- intersect: -4507669322.319738
[2025-02-22 16:34:52] 2025-02-22 21:34:32,780 | INFO     | intersect: -4507669322.319738
[2025-02-22 16:34:52] 2025-02-22 21:34:32,782 | INFO     | chi2: 5.847791528516957
[2025-02-22 16:34:52] 2025-02-22 21:34:32,782 | INFO     | current chi2=5.847791528516957 (change=21.084542834552334 %)
[2025-02-22 16:34:52] 2025-02-22 21:34:32,782 | INFO     | right removable region: 1230
[2025-02-22 16:34:52] 2025-02-22 21:34:32,784 | INFO     | model: linear, x: [1740184955.0, 1740185016.0, 1740185077.0, 1740185138.0, 1740185199.0, 1740185260.0, 1740185321.0, 1740185382.0, 1740185443.0, 1740185504.0, 1740
[2025-02-22 16:34:52] 2025-02-22 21:34:32,784 | INFO     | sum of square deviations: 578427406906.3362
[2025-02-22 16:34:52] 2025-02-22 21:34:32,830 | INFO     | sum of deviations: 959475995478.0593
[2025-02-22 16:34:52] 2025-02-22 21:34:32,830 | INFO     | mean x: 1740222470.6043866
[2025-02-22 16:34:52] 2025-02-22 21:34:32,830 | INFO     | mean y: 2646342.4703493095
[2025-02-22 16:34:52] 2025-02-22 21:34:32,830 | INFO     | -- intersect: -2883976364.8917933
[2025-02-22 16:34:52] 2025-02-22 21:34:32,831 | INFO     | intersect: -2883976364.8917933
[2025-02-22 16:34:52] 2025-02-22 21:34:32,832 | INFO     | chi2: 4.522467998151533
[2025-02-22 16:34:52] 2025-02-22 21:34:32,833 | INFO     | current chi2=4.522467998151533 (change=38.969672935528585 %)
[2025-02-22 16:34:52] 2025-02-22 21:34:32,834 | INFO     | model: linear, x: [1740185260.0, 1740185321.0, 1740185382.0, 1740185443.0, 1740185504.0, 1740185565.0, 1740185626.0, 1740185687.0, 1740185748.0, 1740185809.0, 1740
[2025-02-22 16:34:52] 2025-02-22 21:34:32,835 | INFO     | sum of square deviations: 571407448367.0001
[2025-02-22 16:34:52] 2025-02-22 21:34:32,881 | INFO     | sum of deviations: 691340156055.253
[2025-02-22 16:34:52] 2025-02-22 21:34:32,882 | INFO     | mean x: 1740222623.1068516
[2025-02-22 16:34:52] 2025-02-22 21:34:32,882 | INFO     | mean y: 2652167.005709625
[2025-02-22 16:34:52] 2025-02-22 21:34:32,882 | INFO     | -- intersect: -2102825777.441493
[2025-02-22 16:34:52] 2025-02-22 21:34:32,882 | INFO     | intersect: -2102825777.441493
[2025-02-22 16:34:52] 2025-02-22 21:34:32,884 | INFO     | chi2: 3.0904004631987316
[2025-02-22 16:34:52] 2025-02-22 21:34:32,884 | INFO     | current chi2=3.0904004631987316 (change=31.66562008925502 %)
[2025-02-22 16:34:52] 2025-02-22 21:34:32,886 | INFO     | model: linear, x: [1740185565.0, 1740185626.0, 1740185687.0, 1740185748.0, 1740185809.0, 1740185870.0, 1740185931.0, 1740185992.0, 1740186053.0, 1740186114.0, 1740
[2025-02-22 16:34:52] 2025-02-22 21:34:32,887 | INFO     | sum of square deviations: 564444514152.6534
[2025-02-22 16:34:52] 2025-02-22 21:34:32,933 | INFO     | sum of deviations: 455322972257.3842
[2025-02-22 16:34:52] 2025-02-22 21:34:32,934 | INFO     | mean x: 1740222775.6093366
[2025-02-22 16:34:52] 2025-02-22 21:34:32,934 | INFO     | mean y: 2657333.895986896
[2025-02-22 16:34:52] 2025-02-22 21:34:32,934 | INFO     | -- intersect: -1401135929.592343
[2025-02-22 16:34:52] 2025-02-22 21:34:32,934 | INFO     | intersect: -1401135929.592343
[2025-02-22 16:34:52] 2025-02-22 21:34:32,936 | INFO     | chi2: 1.9306301505815742
[2025-02-22 16:34:52] 2025-02-22 21:34:32,936 | INFO     | current chi2=1.9306301505815742 (change=37.528156186487635 %)
[2025-02-22 16:34:52] 2025-02-22 21:34:32,938 | INFO     | model: linear, x: [1740185870.0, 1740185931.0, 1740185992.0, 1740186053.0, 1740186114.0, 1740186175.0, 1740186236.0, 1740186297.0, 1740186359.0, 1740186419.0, 1740
[2025-02-22 16:34:52] 2025-02-22 21:34:32,938 | INFO     | sum of square deviations: 557538371700.7908
[2025-02-22 16:34:52] 2025-02-22 21:34:32,985 | INFO     | sum of deviations: 372115354477.2369
[2025-02-22 16:34:52] 2025-02-22 21:34:32,985 | INFO     | mean x: 1740222928.1118422
[2025-02-22 16:34:52] 2025-02-22 21:34:32,985 | INFO     | mean y: 2659170.6085526315
[2025-02-22 16:34:52] 2025-02-22 21:34:32,986 | INFO     | -- intersect: -1158810074.6172729
[2025-02-22 16:34:52] 2025-02-22 21:34:32,986 | INFO     | intersect: -1158810074.6172729
[2025-02-22 16:34:52] 2025-02-22 21:34:32,987 | INFO     | chi2: 1.8001532909831202
[2025-02-22 16:34:52] 2025-02-22 21:34:32,988 | INFO     | current chi2=1.8001532909831202 (change=6.758252457579705 %)
[2025-02-22 16:34:52] 2025-02-22 21:34:32,988 | INFO     | left removable region: 40
[2025-02-22 16:34:52] 2025-02-22 21:34:32,989 | INFO     | model: linear, x: [1740187090.0, 1740187152.0, 1740187212.0, 1740187273.0, 1740187334.0, 1740187395.0, 1740187457.0, 1740187520.0, 1740187578.0, 1740187639.0, 1740
[2025-02-22 16:34:52] 2025-02-22 21:34:32,990 | INFO     | sum of square deviations: 522533754559.33203
[2025-02-22 16:34:52] 2025-02-22 21:34:33,037 | INFO     | sum of deviations: 406739614088.00006
[2025-02-22 16:34:52] 2025-02-22 21:34:33,037 | INFO     | mean x: 1740223355.1218488
[2025-02-22 16:34:52] 2025-02-22 21:34:33,037 | INFO     | mean y: 2666065.2
[2025-02-22 16:34:52] 2025-02-22 21:34:33,038 | INFO     | -- intersect: -1351921594.8567343
[2025-02-22 16:34:52] 2025-02-22 21:34:33,038 | INFO     | intersect: -1351921594.8567343
[2025-02-22 16:34:52] 2025-02-22 21:34:33,040 | INFO     | chi2: 0.04158663335058842
[2025-02-22 16:34:52] 2025-02-22 21:34:33,040 | INFO     | -- intersect: -1351921594.8567343
[2025-02-22 16:34:52] 2025-02-22 21:34:33,040 | INFO     | current memory leak: 0.78 B/s (using 1190 data points, chi2=0.04)
[2025-02-22 16:34:52] 2025-02-22 21:34:33,042 | INFO     | ..............................
[2025-02-22 16:34:52] 2025-02-22 21:34:33,042 | INFO     | . Timing measurements:
[2025-02-22 16:34:52] 2025-02-22 21:34:33,042 | INFO     | . get job = 0 s
[2025-02-22 16:34:52] 2025-02-22 21:34:33,042 | INFO     | . initial setup = 6 s
[2025-02-22 16:34:52] 2025-02-22 21:34:33,043 | INFO     | . payload setup = 54 s
[2025-02-22 16:34:52] 2025-02-22 21:34:33,043 | INFO     | . stage-in = 0 s
[2025-02-22 16:34:52] 2025-02-22 21:34:33,044 | INFO     | . payload execution = 75424 s
[2025-02-22 16:34:52] 2025-02-22 21:34:33,044 | INFO     | . stage-out = 8 s
[2025-02-22 16:34:52] 2025-02-22 21:34:33,044 | INFO     | . log creation = 3 s
[2025-02-22 16:34:52] 2025-02-22 21:34:33,044 | INFO     | ..............................
[2025-02-22 16:34:52] 2025-02-22 21:34:33,537 | INFO     | 
[2025-02-22 16:34:52] 2025-02-22 21:34:33,537 | INFO     | job summary report
[2025-02-22 16:34:52] 2025-02-22 21:34:33,537 | INFO     | --------------------------------------------------
[2025-02-22 16:34:52] 2025-02-22 21:34:33,537 | INFO     | PanDA job id: 6522500101
[2025-02-22 16:34:52] 2025-02-22 21:34:33,538 | INFO     | task id: 43205094
[2025-02-22 16:34:52] 2025-02-22 21:34:33,538 | INFO     | errors: (none)
[2025-02-22 16:34:52] 2025-02-22 21:34:33,538 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 16:34:52] 2025-02-22 21:34:33,538 | INFO     | pilot state: finished 
[2025-02-22 16:34:52] 2025-02-22 21:34:33,538 | INFO     | transexitcode: 0
[2025-02-22 16:34:52] 2025-02-22 21:34:33,538 | INFO     | exeerrorcode: 0
[2025-02-22 16:34:52] 2025-02-22 21:34:33,539 | INFO     | exeerrordiag: 
[2025-02-22 16:34:52] 2025-02-22 21:34:33,539 | INFO     | exitcode: 0
[2025-02-22 16:34:52] 2025-02-22 21:34:33,539 | INFO     | exitmsg: OK
[2025-02-22 16:34:52] 2025-02-22 21:34:33,539 | INFO     | cpuconsumptiontime: 199214 s
[2025-02-22 16:34:52] 2025-02-22 21:34:33,539 | INFO     | nevents: 400
[2025-02-22 16:34:52] 2025-02-22 21:34:33,539 | INFO     | neventsw: 0
[2025-02-22 16:34:52] 2025-02-22 21:34:33,539 | INFO     | pid: 1009
[2025-02-22 16:34:52] 2025-02-22 21:34:33,540 | INFO     | pgrp: 1009
[2025-02-22 16:34:52] 2025-02-22 21:34:33,540 | INFO     | corecount: 10
[2025-02-22 16:34:52] 2025-02-22 21:34:33,540 | INFO     | event service: False
[2025-02-22 16:34:52] 2025-02-22 21:34:33,540 | INFO     | sizes: {0: 2383212, 1: 2383411, 12: 2383411, 23: 2383439, 33: 2383467, 44: 2383523, 48: 2383885, 55: 2383913, 75483: 2441187, 75493: 2450156, 75494: 2450212, 75549
[2025-02-22 16:34:52] 2025-02-22 21:34:33,540 | INFO     | --------------------------------------------------
[2025-02-22 16:34:52] 2025-02-22 21:34:33,540 | INFO     | 
[2025-02-22 16:34:52] 2025-02-22 21:34:33,541 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-22 16:34:52] 2025-02-22 21:34:33,568 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 16:34:52] 2025-02-22 21:34:33,569 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 16:34:52] 2025-02-22 21:34:33,569 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 16:34:52] 2025-02-22 21:34:33,569 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 16:34:52] 2025-02-22 21:34:33,569 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 16:34:52] 2025-02-22 21:34:33,570 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 16:34:52] 2025-02-22 21:34:33,570 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 16:34:52] 2025-02-22 21:34:33,570 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 16:34:52] 2025-02-22 21:34:33,570 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 16:34:52] 2025-02-22 21:34:33,570 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 16:34:52] 2025-02-22 21:34:33,571 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 16:34:52] 2025-02-22 21:34:33,571 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 16:34:52] 2025-02-22 21:34:33,571 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 16:34:52] 2025-02-22 21:34:33,571 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 16:34:52] 2025-02-22 21:34:33,571 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 16:34:52] 2025-02-22 21:34:33,571 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 16:34:52] 2025-02-22 21:34:33,572 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 16:34:52] 2025-02-22 21:34:33,572 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 16:34:52] 2025-02-22 21:34:33,598 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 16:34:52] 2025-02-22 21:34:33,598 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 16:34:52] 2025-02-22 21:34:33,599 | INFO     | job 6522500101 has completed (purged errors)
[2025-02-22 16:34:52] 2025-02-22 21:34:33,599 | INFO     | overall cleanup function is called
[2025-02-22 16:34:52] 2025-02-22 21:34:34,614 | INFO     | --- collectZombieJob: --- 10, [1009]
[2025-02-22 16:34:52] 2025-02-22 21:34:34,614 | INFO     | zombie collector waiting for pid 1009
[2025-02-22 16:34:52] 2025-02-22 21:34:34,614 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 16:34:52] 2025-02-22 21:34:34,615 | INFO     | collected zombie processes
[2025-02-22 16:34:52] 2025-02-22 21:34:34,615 | INFO     | will attempt to kill all subprocesses of pid=1009
[2025-02-22 16:34:52] 2025-02-22 21:34:35,149 | INFO     | process IDs to be killed: [1009] (in reverse order)
[2025-02-22 16:34:52] 2025-02-22 21:34:35,792 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 16:34:52] 2025-02-22 21:34:35,792 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 16:34:52] 2025-02-22 21:34:35,803 | INFO     | did not find any defunct processes belonging to 1009
[2025-02-22 16:34:52] 2025-02-22 21:34:35,814 | INFO     | did not find any defunct processes belonging to 1009
[2025-02-22 16:34:52] 2025-02-22 21:34:35,814 | INFO     | ready for new job
[2025-02-22 16:34:52] 2025-02-22 21:34:35,814 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 16:34:52] 2025-02-22 21:34:35,821 | INFO     | **************************************
[2025-02-22 16:34:52] 2025-02-22 21:34:35,821 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 16:34:52] 2025-02-22 21:34:35,822 | INFO     | **************************************
[2025-02-22 16:34:52] 2025-02-22 21:34:35,822 | INFO     | 
[2025-02-22 16:34:52] 2025-02-22 21:34:35,824 | INFO     | architecture information:
[2025-02-22 16:34:52] 2025-02-22 21:34:35,824 | INFO     | executing command: cat /etc/os-release
[2025-02-22 16:34:52] 2025-02-22 21:34:35,842 | INFO     | cat /etc/os-release:
[2025-02-22 16:34:52] NAME="CentOS Linux"
[2025-02-22 16:34:52] VERSION="7 (Core)"
[2025-02-22 16:34:52] ID="centos"
[2025-02-22 16:34:52] ID_LIKE="rhel fedora"
[2025-02-22 16:34:52] VERSION_ID="7"
[2025-02-22 16:34:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 16:34:52] ANSI_COLOR="0;31"
[2025-02-22 16:34:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 16:34:52] HOME_URL="https://www.centos.org/"
[2025-02-22 16:34:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 16:34:52] 
[2025-02-22 16:34:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 16:34:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 16:34:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 16:34:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 16:34:52] 
[2025-02-22 16:34:52] 2025-02-22 21:34:35,843 | INFO     | **************************************
[2025-02-22 16:34:52] 2025-02-22 21:34:36,346 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-22 16:34:52] 2025-02-22 21:34:36,604 | INFO     | sufficient remaining disk space (56177459200 B)
[2025-02-22 16:34:52] 2025-02-22 21:34:36,605 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 16:34:52] 2025-02-22 21:34:36,605 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 16:34:52] 2025-02-22 21:34:36,605 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-22 16:34:52] 2025-02-22 21:34:36,606 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 16:34:52] 2025-02-22 21:34:36,606 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 16:34:52] 2025-02-22 21:34:36,606 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 16:34:52] 2025-02-22 21:34:36,750 | INFO     | all payload control threads have been joined
[2025-02-22 16:34:52] 2025-02-22 21:34:36,918 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-22 16:34:52] 2025-02-22 21:34:36,918 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-22 16:34:52] 2025-02-22 21:34:36,919 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 16:34:52] 2025-02-22 21:34:36,919 | INFO     | will abort loop
[2025-02-22 16:34:52] 2025-02-22 21:34:37,611 | INFO     | [job] retrieve thread has finished
[2025-02-22 16:34:52] 2025-02-22 21:34:37,612 | INFO     | [job] validate thread has finished
[2025-02-22 16:34:52] 2025-02-22 21:34:37,631 | INFO     | all job control threads have been joined
[2025-02-22 16:34:52] 2025-02-22 21:34:37,637 | INFO     | all data control threads have been joined
[2025-02-22 16:34:52] 2025-02-22 21:34:37,755 | INFO     | [payload] control thread has finished
[2025-02-22 16:34:52] 2025-02-22 21:34:37,920 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 16:34:52] 2025-02-22 21:34:37,925 | INFO     | [job] job monitor thread has finished
[2025-02-22 16:34:52] 2025-02-22 21:34:38,231 | INFO     | [payload] validate_post thread has finished
[2025-02-22 16:34:52] 2025-02-22 21:34:38,346 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 16:34:52] 2025-02-22 21:34:38,569 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 16:34:52] 2025-02-22 21:34:38,637 | INFO     | [job] control thread has finished
[2025-02-22 16:34:52] 2025-02-22 21:34:38,643 | INFO     | [data] control thread has finished
[2025-02-22 16:34:52] 2025-02-22 21:34:38,802 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 16:34:52] 2025-02-22 21:34:38,830 | INFO     | [payload] failed_post thread has finished
[2025-02-22 16:34:52] 2025-02-22 21:34:38,995 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 16:34:52] 2025-02-22 21:34:39,023 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 16:34:52] 2025-02-22 21:34:39,036 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 16:34:52] 2025-02-22 21:34:39,055 | INFO     | [data] copytool_in thread has finished
[2025-02-22 16:34:52] 2025-02-22 21:34:39,575 | INFO     | [job] queue monitor thread has finished
[2025-02-22 16:34:52] 2025-02-22 21:34:39,936 | INFO     | [data] copytool_out thread has finished
[2025-02-22 16:34:52] 2025-02-22 21:34:43,003 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 16:34:52] 2025-02-22 21:34:44,413 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140251263002432)>', '<ExcThread(monitor, started 140250747762432)>']
[2025-02-22 16:34:52] 2025-02-22 21:34:44,654 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 16:34:52] 2025-02-22 21:34:44,654 | INFO     | [monitor] control thread has ended
[2025-02-22 16:34:52] 2025-02-22 21:34:49,438 | INFO     | all workflow threads have been joined
[2025-02-22 16:34:52] 2025-02-22 21:34:49,438 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 16:34:52] 2025-02-22 21:34:49,439 | INFO     | traces error code: 0
[2025-02-22 16:34:52] 2025-02-22 21:34:49,439 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 16:34:52] 2025-02-22 21:34:50,167 [wrapper] ==== pilot stdout END ====
[2025-02-22 16:34:52] 2025-02-22 21:34:50,205 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 16:34:52] 2025-02-22 21:34:50,248 [wrapper] pilotpid: 31820
[2025-02-22 16:34:52] 2025-02-22 21:34:50,301 [wrapper] Pilot exit status: 0
[2025-02-22 16:34:52] 2025-02-22 21:34:50,527 [wrapper] pandaids: 6522500101
[2025-02-22 16:34:52] 2025-02-22 21:34:51,148 [wrapper] cleanup supervisor_pilot  4858 31821
[2025-02-22 16:34:52] 2025-02-22 21:34:51,199 [wrapper] Test setup, not cleaning
[2025-02-22 16:34:52] 2025-02-22 21:34:51,292 [wrapper] apfmon messages muted
[2025-02-22 16:34:52] 2025-02-22 21:34:51,345 [wrapper] ==== wrapper stdout END ====
[2025-02-22 16:34:52] 2025-02-22 21:34:51,398 [wrapper] ==== wrapper stderr END ====
[2025-02-22 16:34:52]  *** Error codes and diagnostics ***
[2025-02-22 16:34:52]     "exeErrorCode": 0,
[2025-02-22 16:34:52]     "exeErrorDiag": "",
[2025-02-22 16:34:52]     "pilotErrorCode": 0,
[2025-02-22 16:34:52]     "pilotErrorDiag": "",
[2025-02-22 16:34:52]  *** Listing of results directory ***
[2025-02-22 16:34:52] total 692904
[2025-02-22 16:34:52] -rw-r--r-- 1 boincer umatlas    491065 Feb 21 14:37 pilot3.tar.gz
[2025-02-22 16:34:52] -rwx------ 1 boincer umatlas     35865 Feb 21 14:44 runpilot2-wrapper.sh
[2025-02-22 16:34:52] -rw-r--r-- 1 boincer umatlas      5118 Feb 21 14:44 queuedata.json
[2025-02-22 16:34:52] -rw-r--r-- 1 boincer umatlas       100 Feb 21 19:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 16:34:52] -rwxr-xr-x 1 boincer umatlas      7986 Feb 21 19:31 run_atlas
[2025-02-22 16:34:52] -rw-r--r-- 1 boincer umatlas       105 Feb 21 19:31 job.xml
[2025-02-22 16:34:52] -rw-r--r-- 2 boincer umatlas 344256471 Feb 21 19:31 EVNT.43092757._001362.pool.root.1
[2025-02-22 16:34:52] -rw-r--r-- 2 boincer umatlas     17569 Feb 21 19:31 start_atlas.sh
[2025-02-22 16:34:52] drwxrwx--x 2 boincer umatlas      4096 Feb 21 19:31 shared
[2025-02-22 16:34:52] -rw-r--r-- 2 boincer umatlas    503553 Feb 21 19:31 input.tar.gz
[2025-02-22 16:34:52] -rw-r--r-- 1 boincer umatlas         0 Feb 21 19:31 boinc_lockfile
[2025-02-22 16:34:52] -rw-r--r-- 1 boincer umatlas      2545 Feb 21 19:32 pandaJob.out
[2025-02-22 16:34:52] -rw------- 1 boincer umatlas       467 Feb 21 19:32 setup.sh.local
[2025-02-22 16:34:52] -rw------- 1 boincer umatlas    987681 Feb 21 19:33 agis_schedconf.cvmfs.json
[2025-02-22 16:34:52] drwx------ 4 boincer umatlas      4096 Feb 21 19:33 pilot3
[2025-02-22 16:34:52] -rw------- 1 boincer umatlas 334440740 Feb 22 16:31 HITS.43205094._033370.pool.root.1
[2025-02-22 16:34:52] -rw-r--r-- 1 boincer umatlas       533 Feb 22 16:31 boinc_task_state.xml
[2025-02-22 16:34:52] -rw-r--r-- 1 boincer umatlas      6037 Feb 22 16:31 init_data.xml
[2025-02-22 16:34:52] -rw------- 1 boincer umatlas      1061 Feb 22 16:33 memory_monitor_summary.json
[2025-02-22 16:34:52] -rw------- 1 boincer umatlas   1582569 Feb 22 16:33 agis_ddmendpoints.agis.ALL.json
[2025-02-22 16:34:52] -rw------- 1 boincer umatlas   1266584 Feb 22 16:33 log.43205094._033370.job.log.tgz.1
[2025-02-22 16:34:52] -rw------- 1 boincer umatlas        95 Feb 22 16:33 pilot_heartbeat.json
[2025-02-22 16:34:52] -rw------- 1 boincer umatlas      7768 Feb 22 16:34 heartbeat.json
[2025-02-22 16:34:52] -rw-r--r-- 1 boincer umatlas      8192 Feb 22 16:34 boinc_mmap_file
[2025-02-22 16:34:52] -rw-r--r-- 1 boincer umatlas        29 Feb 22 16:34 wrapper_checkpoint.txt
[2025-02-22 16:34:52] -rw------- 1 boincer umatlas      4524 Feb 22 16:34 pilotlog.txt
[2025-02-22 16:34:52] -rw------- 1 boincer umatlas  12249067 Feb 22 16:34 log.43205094._033370.job.log.1
[2025-02-22 16:34:52] -rw------- 1 boincer umatlas       357 Feb 22 16:34 output.list
[2025-02-22 16:34:52] -rw-r--r-- 1 boincer umatlas       620 Feb 22 16:34 runtime_log
[2025-02-22 16:34:52] -rw------- 1 boincer umatlas  13537280 Feb 22 16:34 result.tar.gz
[2025-02-22 16:34:52] -rw-r--r-- 1 boincer umatlas     11421 Feb 22 16:34 runtime_log.err
[2025-02-22 16:34:52] -rw------- 1 boincer umatlas       667 Feb 22 16:34 Ke7NDmX7n56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm5tsKDm1pslKo.diag
[2025-02-22 16:34:52] -rw-r--r-- 1 boincer umatlas     21711 Feb 22 16:34 stderr.txt
[2025-02-22 16:34:52] HITS file was successfully produced:
[2025-02-22 16:34:52] -rw------- 1 boincer umatlas 334440740 Feb 22 16:31 shared/HITS.pool.root.1
[2025-02-22 16:34:52]  *** Contents of shared directory: ***
[2025-02-22 16:34:52] total 676528
[2025-02-22 16:34:52] -rw-r--r-- 2 boincer umatlas 344256471 Feb 21 19:31 ATLAS.root_0
[2025-02-22 16:34:52] -rw-r--r-- 2 boincer umatlas     17569 Feb 21 19:31 start_atlas.sh
[2025-02-22 16:34:52] -rw-r--r-- 2 boincer umatlas    503553 Feb 21 19:31 input.tar.gz
[2025-02-22 16:34:52] -rw------- 1 boincer umatlas 334440740 Feb 22 16:31 HITS.pool.root.1
[2025-02-22 16:34:52] -rw------- 1 boincer umatlas  13537280 Feb 22 16:34 result.tar.gz
16:34:54 (21502): run_atlas exited; CPU time 198895.804046
16:34:54 (21502): called boinc_finish(0)

</stderr_txt>
]]>

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