Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
11:48:05 (412848): wrapper (7.7.26015): starting
11:48:05 (412848): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 11:48:05] Arguments: --nthreads 4
[2025-02-22 11:48:05] Threads: 4
[2025-02-22 11:48:05] Checking for CVMFS
[2025-02-22 11:48:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-22 11:48:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-22 11:48:05] Running cvmfs_config stat atlas.cern.ch
[2025-02-22 11:48:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-22 11:48:05] 2.12.6.0 13007 17998 52652 142934 2 187 24686544 33554433 2730 130560 0 56087127 99.998 3991003 2960 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2025-02-22 11:48:05] CVMFS is ok
[2025-02-22 11:48:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 11:48:05] Checking for apptainer binary...
[2025-02-22 11:48:05] apptainer is not installed, using version from CVMFS
[2025-02-22 11:48:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 11:48:05] Evangelos-Katikos
[2025-02-22 11:48:05] apptainer works
[2025-02-22 11:48:05] Set ATHENA_PROC_NUMBER=4
[2025-02-22 11:48:05] Set ATHENA_CORE_NUMBER=4
[2025-02-22 11:48:05] Starting ATLAS job with PandaID=6522148434
[2025-02-22 11:48:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 14:43:28]  *** The last 200 lines of the pilot log: ***
[2025-02-22 14:43:28] 2025-02-22 12:43:09,482 | INFO     | model: linear, x: [1740217714.0, 1740217775.0, 1740217836.0, 1740217897.0, 1740217958.0, 1740218019.0, 1740218080.0, 1740218141.0, 1740218202.0, 1740218263.0, 1740
[2025-02-22 14:43:28] 2025-02-22 12:43:09,482 | INFO     | sum of square deviations: 1577789583.0
[2025-02-22 14:43:28] 2025-02-22 12:43:09,483 | INFO     | sum of deviations: 26590905585.0
[2025-02-22 14:43:28] 2025-02-22 12:43:09,483 | INFO     | mean x: 1740222929.5
[2025-02-22 14:43:28] 2025-02-22 12:43:09,483 | INFO     | mean y: 2349474.5
[2025-02-22 14:43:28] 2025-02-22 12:43:09,483 | INFO     | -- intersect: -29326088305.65146
[2025-02-22 14:43:28] 2025-02-22 12:43:09,483 | INFO     | intersect: -29326088305.65146
[2025-02-22 14:43:28] 2025-02-22 12:43:09,483 | INFO     | chi2: 2.082189727433367
[2025-02-22 14:43:28] 2025-02-22 12:43:09,483 | INFO     | model: linear, x: [1740217714.0, 1740217775.0, 1740217836.0, 1740217897.0, 1740217958.0, 1740218019.0, 1740218080.0, 1740218141.0, 1740218202.0, 1740218263.0, 1740
[2025-02-22 14:43:28] 2025-02-22 12:43:09,484 | INFO     | sum of square deviations: 1444149868.0
[2025-02-22 14:43:28] 2025-02-22 12:43:09,484 | INFO     | sum of deviations: 25628392990.0
[2025-02-22 14:43:28] 2025-02-22 12:43:09,484 | INFO     | mean x: 1740222777.0
[2025-02-22 14:43:28] 2025-02-22 12:43:09,484 | INFO     | mean y: 2348376.113772455
[2025-02-22 14:43:28] 2025-02-22 12:43:09,484 | INFO     | -- intersect: -30880258898.48325
[2025-02-22 14:43:28] 2025-02-22 12:43:09,484 | INFO     | intersect: -30880258898.48325
[2025-02-22 14:43:28] 2025-02-22 12:43:09,485 | INFO     | chi2: 2.0846539521007417
[2025-02-22 14:43:28] 2025-02-22 12:43:09,485 | INFO     | current chi2=2.0846539521007417 (change=-0.11834774876217828 %)
[2025-02-22 14:43:28] 2025-02-22 12:43:09,485 | INFO     | right removable region: 166
[2025-02-22 14:43:28] 2025-02-22 12:43:09,485 | INFO     | model: linear, x: [1740218019.0, 1740218080.0, 1740218141.0, 1740218202.0, 1740218263.0, 1740218324.0, 1740218385.0, 1740218446.0, 1740218507.0, 1740218568.0, 1740
[2025-02-22 14:43:28] 2025-02-22 12:43:09,485 | INFO     | sum of square deviations: 1444149868.0
[2025-02-22 14:43:28] 2025-02-22 12:43:09,486 | INFO     | sum of deviations: -8003451869.0
[2025-02-22 14:43:28] 2025-02-22 12:43:09,486 | INFO     | mean x: 1740223082.0
[2025-02-22 14:43:28] 2025-02-22 12:43:09,486 | INFO     | mean y: 2388669.850299401
[2025-02-22 14:43:28] 2025-02-22 12:43:09,486 | INFO     | -- intersect: 9646672817.034004
[2025-02-22 14:43:28] 2025-02-22 12:43:09,486 | INFO     | intersect: 9646672817.034004
[2025-02-22 14:43:28] 2025-02-22 12:43:09,486 | INFO     | chi2: 0.04331212666813928
[2025-02-22 14:43:28] 2025-02-22 12:43:09,486 | INFO     | current chi2=0.04331212666813928 (change=97.91987607577296 %)
[2025-02-22 14:43:28] 2025-02-22 12:43:09,486 | INFO     | model: linear, x: [1740218324.0, 1740218385.0, 1740218446.0, 1740218507.0, 1740218568.0, 1740218629.0, 1740218690.0, 1740218751.0, 1740218812.0, 1740218873.0, 1740
[2025-02-22 14:43:28] 2025-02-22 12:43:09,486 | INFO     | sum of square deviations: 1318277740.5
[2025-02-22 14:43:28] 2025-02-22 12:43:09,487 | INFO     | sum of deviations: -8745404568.0
[2025-02-22 14:43:28] 2025-02-22 12:43:09,487 | INFO     | mean x: 1740223234.5
[2025-02-22 14:43:28] 2025-02-22 12:43:09,487 | INFO     | mean y: 2389530.4444444445
[2025-02-22 14:43:28] 2025-02-22 12:43:09,487 | INFO     | -- intersect: 11546964513.986036
[2025-02-22 14:43:28] 2025-02-22 12:43:09,487 | INFO     | intersect: 11546964513.986036
[2025-02-22 14:43:28] 2025-02-22 12:43:09,487 | INFO     | chi2: 0.034674231459403126
[2025-02-22 14:43:28] 2025-02-22 12:43:09,487 | INFO     | current chi2=0.034674231459403126 (change=19.94336430284374 %)
[2025-02-22 14:43:28] 2025-02-22 12:43:09,487 | INFO     | left removable region: 20
[2025-02-22 14:43:28] 2025-02-22 12:43:09,487 | INFO     | model: linear, x: [1740218934.0, 1740218995.0, 1740219056.0, 1740219117.0, 1740219178.0, 1740219239.0, 1740219300.0, 1740219361.0, 1740219422.0, 1740219483.0, 1740
[2025-02-22 14:43:28] 2025-02-22 12:43:09,487 | INFO     | sum of square deviations: 964976232.5
[2025-02-22 14:43:28] 2025-02-22 12:43:09,488 | INFO     | sum of deviations: -4749440297.0
[2025-02-22 14:43:28] 2025-02-22 12:43:09,488 | INFO     | mean x: 1740223356.5
[2025-02-22 14:43:28] 2025-02-22 12:43:09,488 | INFO     | mean y: 2384018.9452054794
[2025-02-22 14:43:28] 2025-02-22 12:43:09,488 | INFO     | -- intersect: 8567451900.181024
[2025-02-22 14:43:28] 2025-02-22 12:43:09,488 | INFO     | intersect: 8567451900.181024
[2025-02-22 14:43:28] 2025-02-22 12:43:09,488 | INFO     | chi2: 0.02789167756699194
[2025-02-22 14:43:28] 2025-02-22 12:43:09,488 | INFO     | -- intersect: 8567451900.181024
[2025-02-22 14:43:28] 2025-02-22 12:43:09,488 | INFO     | current memory leak: -4.92 B/s (using 146 data points, chi2=0.03)
[2025-02-22 14:43:28] 2025-02-22 12:43:09,489 | INFO     | ..............................
[2025-02-22 14:43:28] 2025-02-22 12:43:09,489 | INFO     | . Timing measurements:
[2025-02-22 14:43:28] 2025-02-22 12:43:09,489 | INFO     | . get job = 0 s
[2025-02-22 14:43:28] 2025-02-22 12:43:09,489 | INFO     | . initial setup = 1 s
[2025-02-22 14:43:28] 2025-02-22 12:43:09,489 | INFO     | . payload setup = 3 s
[2025-02-22 14:43:28] 2025-02-22 12:43:09,489 | INFO     | . stage-in = 0 s
[2025-02-22 14:43:28] 2025-02-22 12:43:09,489 | INFO     | . payload execution = 10470 s
[2025-02-22 14:43:28] 2025-02-22 12:43:09,489 | INFO     | . stage-out = 0 s
[2025-02-22 14:43:28] 2025-02-22 12:43:09,489 | INFO     | . log creation = 0 s
[2025-02-22 14:43:28] 2025-02-22 12:43:09,489 | INFO     | ..............................
[2025-02-22 14:43:28] 2025-02-22 12:43:09,549 | INFO     | 
[2025-02-22 14:43:28] 2025-02-22 12:43:09,549 | INFO     | job summary report
[2025-02-22 14:43:28] 2025-02-22 12:43:09,549 | INFO     | --------------------------------------------------
[2025-02-22 14:43:28] 2025-02-22 12:43:09,549 | INFO     | PanDA job id: 6522148434
[2025-02-22 14:43:28] 2025-02-22 12:43:09,549 | INFO     | task id: 43205075
[2025-02-22 14:43:28] 2025-02-22 12:43:09,549 | INFO     | errors: (none)
[2025-02-22 14:43:28] 2025-02-22 12:43:09,549 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 14:43:28] 2025-02-22 12:43:09,549 | INFO     | pilot state: finished 
[2025-02-22 14:43:28] 2025-02-22 12:43:09,549 | INFO     | transexitcode: 0
[2025-02-22 14:43:28] 2025-02-22 12:43:09,549 | INFO     | exeerrorcode: 0
[2025-02-22 14:43:28] 2025-02-22 12:43:09,550 | INFO     | exeerrordiag: 
[2025-02-22 14:43:28] 2025-02-22 12:43:09,550 | INFO     | exitcode: 0
[2025-02-22 14:43:28] 2025-02-22 12:43:09,550 | INFO     | exitmsg: OK
[2025-02-22 14:43:28] 2025-02-22 12:43:09,550 | INFO     | cpuconsumptiontime: 40365 s
[2025-02-22 14:43:28] 2025-02-22 12:43:09,550 | INFO     | nevents: 400
[2025-02-22 14:43:28] 2025-02-22 12:43:09,550 | INFO     | neventsw: 0
[2025-02-22 14:43:28] 2025-02-22 12:43:09,550 | INFO     | pid: 423334
[2025-02-22 14:43:28] 2025-02-22 12:43:09,550 | INFO     | pgrp: 423334
[2025-02-22 14:43:28] 2025-02-22 12:43:09,550 | INFO     | corecount: 4
[2025-02-22 14:43:28] 2025-02-22 12:43:09,550 | INFO     | event service: False
[2025-02-22 14:43:28] 2025-02-22 12:43:09,550 | INFO     | sizes: {0: 2383319, 3: 2383525, 11: 2383553, 10478: 2412432, 10479: 2421373, 10480: 2421429, 10484: 2421727}
[2025-02-22 14:43:28] 2025-02-22 12:43:09,550 | INFO     | --------------------------------------------------
[2025-02-22 14:43:28] 2025-02-22 12:43:09,550 | INFO     | 
[2025-02-22 14:43:28] 2025-02-22 12:43:09,550 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/2
[2025-02-22 14:43:28] 2025-02-22 12:43:09,564 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | job 6522148434 has completed (purged errors)
[2025-02-22 14:43:28] 2025-02-22 12:43:09,565 | INFO     | overall cleanup function is called
[2025-02-22 14:43:28] 2025-02-22 12:43:09,590 | WARNING  | process 423334 can no longer be monitored (due to stat problems) - aborting
[2025-02-22 14:43:28] 2025-02-22 12:43:09,705 | INFO     | using path: /home/ek/BOINC/slots/2/memory_monitor_summary.json (trf name=prmon)
[2025-02-22 14:43:28] 2025-02-22 12:43:09,705 | INFO     | using path: /home/ek/BOINC/slots/2/memory_monitor_summary.json (trf name=prmon)
[2025-02-22 14:43:28] 2025-02-22 12:43:09,706 | INFO     | skipping file size check of payload stdout file (/home/ek/BOINC/slots/2/PanDA_Pilot-6522148434/payload.stdout) since it has not been created yet
[2025-02-22 14:43:28] 2025-02-22 12:43:09,706 | INFO     | executing command: df -mP /home/ek/BOINC/slots/2
[2025-02-22 14:43:28] 2025-02-22 12:43:09,715 | INFO     | sufficient remaining disk space (101858672640 B)
[2025-02-22 14:43:28] 2025-02-22 12:43:09,715 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-02-22 14:43:28] 2025-02-22 12:43:09,715 | INFO     | output file size check: skipping output file /home/ek/BOINC/slots/2/PanDA_Pilot-6522148434/HITS.43205075._057493.pool.root.1 since it does not exist
[2025-02-22 14:43:28] 2025-02-22 12:43:09,826 | INFO     | number of running child processes to parent process 423334: 1
[2025-02-22 14:43:28] 2025-02-22 12:43:09,826 | INFO     | maximum number of monitored processes: 6
[2025-02-22 14:43:28] 2025-02-22 12:43:09,826 | INFO     | aborting job monitoring since job object (job id=6522148434) has expired
[2025-02-22 14:43:28] 2025-02-22 12:43:10,573 | INFO     | --- collectZombieJob: --- 10, [423334]
[2025-02-22 14:43:28] 2025-02-22 12:43:10,573 | INFO     | zombie collector waiting for pid 423334
[2025-02-22 14:43:28] 2025-02-22 12:43:10,573 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 14:43:28] 2025-02-22 12:43:10,573 | INFO     | collected zombie processes
[2025-02-22 14:43:28] 2025-02-22 12:43:10,573 | INFO     | will attempt to kill all subprocesses of pid=423334
[2025-02-22 14:43:28] 2025-02-22 12:43:10,686 | INFO     | process IDs to be killed: [423334] (in reverse order)
[2025-02-22 14:43:28] 2025-02-22 12:43:10,753 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 14:43:28] 2025-02-22 12:43:10,753 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 14:43:28] 2025-02-22 12:43:10,757 | INFO     | did not find any defunct processes belonging to 423334
[2025-02-22 14:43:28] 2025-02-22 12:43:10,761 | INFO     | did not find any defunct processes belonging to 423334
[2025-02-22 14:43:28] 2025-02-22 12:43:10,761 | INFO     | ready for new job
[2025-02-22 14:43:28] 2025-02-22 12:43:10,761 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 14:43:28] 2025-02-22 12:43:10,763 | INFO     | **************************************
[2025-02-22 14:43:28] 2025-02-22 12:43:10,763 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 14:43:28] 2025-02-22 12:43:10,763 | INFO     | **************************************
[2025-02-22 14:43:28] 2025-02-22 12:43:10,763 | INFO     | 
[2025-02-22 14:43:28] 2025-02-22 12:43:10,764 | INFO     | architecture information:
[2025-02-22 14:43:28] 2025-02-22 12:43:10,764 | INFO     | executing command: cat /etc/os-release
[2025-02-22 14:43:28] 2025-02-22 12:43:10,772 | INFO     | cat /etc/os-release:
[2025-02-22 14:43:28] NAME="CentOS Linux"
[2025-02-22 14:43:28] VERSION="7 (Core)"
[2025-02-22 14:43:28] ID="centos"
[2025-02-22 14:43:28] ID_LIKE="rhel fedora"
[2025-02-22 14:43:28] VERSION_ID="7"
[2025-02-22 14:43:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 14:43:28] ANSI_COLOR="0;31"
[2025-02-22 14:43:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 14:43:28] HOME_URL="https://www.centos.org/"
[2025-02-22 14:43:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 14:43:28] 
[2025-02-22 14:43:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 14:43:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 14:43:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 14:43:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 14:43:28] 
[2025-02-22 14:43:28] 2025-02-22 12:43:10,773 | INFO     | **************************************
[2025-02-22 14:43:28] 2025-02-22 12:43:11,275 | INFO     | executing command: df -mP /home/ek/BOINC/slots/2
[2025-02-22 14:43:28] 2025-02-22 12:43:11,285 | INFO     | sufficient remaining disk space (101859721216 B)
[2025-02-22 14:43:28] 2025-02-22 12:43:11,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 14:43:28] 2025-02-22 12:43:11,285 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 14:43:28] 2025-02-22 12:43:11,285 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-22 14:43:28] 2025-02-22 12:43:11,285 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 14:43:28] 2025-02-22 12:43:11,285 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 14:43:28] 2025-02-22 12:43:11,285 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 14:43:28] 2025-02-22 12:43:11,285 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 14:43:28] 2025-02-22 12:43:11,286 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 14:43:28] 2025-02-22 12:43:11,286 | INFO     | aborting loop
[2025-02-22 14:43:28] 2025-02-22 12:43:11,716 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 14:43:28] 2025-02-22 12:43:12,287 | INFO     | [job] job monitor thread has finished
[2025-02-22 14:43:28] 2025-02-22 12:43:12,290 | INFO     | [job] retrieve thread has finished
[2025-02-22 14:43:28] 2025-02-22 12:43:12,290 | INFO     | [job] queue monitor thread has finished
[2025-02-22 14:43:28] 2025-02-22 12:43:12,379 | INFO     | all data control threads have been joined
[2025-02-22 14:43:28] 2025-02-22 12:43:12,387 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 14:43:28] 2025-02-22 12:43:12,429 | INFO     | all job control threads have been joined
[2025-02-22 14:43:28] 2025-02-22 12:43:12,666 | INFO     | all payload control threads have been joined
[2025-02-22 14:43:28] 2025-02-22 12:43:12,820 | INFO     | [payload] validate_post thread has finished
[2025-02-22 14:43:28] 2025-02-22 12:43:13,107 | INFO     | [payload] failed_post thread has finished
[2025-02-22 14:43:28] 2025-02-22 12:43:13,238 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 14:43:28] 2025-02-22 12:43:13,239 | INFO     | [job] validate thread has finished
[2025-02-22 14:43:28] 2025-02-22 12:43:13,384 | INFO     | [data] control thread has finished
[2025-02-22 14:43:28] 2025-02-22 12:43:13,432 | INFO     | [data] copytool_in thread has finished
[2025-02-22 14:43:28] 2025-02-22 12:43:13,432 | INFO     | [job] control thread has finished
[2025-02-22 14:43:28] 2025-02-22 12:43:13,450 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 14:43:28] 2025-02-22 12:43:13,671 | INFO     | [payload] control thread has finished
[2025-02-22 14:43:28] 2025-02-22 12:43:13,762 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 14:43:28] 2025-02-22 12:43:14,391 | INFO     | [data] copytool_out thread has finished
[2025-02-22 14:43:28] 2025-02-22 12:43:15,721 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 14:43:28] 2025-02-22 12:43:21,497 | INFO     | job.realtimelogging is not enabled
[2025-02-22 14:43:28] 2025-02-22 12:43:22,500 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 14:43:28] 2025-02-22 12:43:23,143 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140524886239040)>', '<ExcThread(monitor, started 140524451268352)>']
[2025-02-22 14:43:28] 2025-02-22 12:43:23,336 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 14:43:28] 2025-02-22 12:43:23,336 | INFO     | [monitor] control thread has ended
[2025-02-22 14:43:28] 2025-02-22 12:43:28,168 | INFO     | all workflow threads have been joined
[2025-02-22 14:43:28] 2025-02-22 12:43:28,168 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 14:43:28] 2025-02-22 12:43:28,168 | INFO     | traces error code: 0
[2025-02-22 14:43:28] 2025-02-22 12:43:28,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 14:43:28] 2025-02-22 12:43:28,235 [wrapper] ==== pilot stdout END ====
[2025-02-22 14:43:28] 2025-02-22 12:43:28,237 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 14:43:28] 2025-02-22 12:43:28,239 [wrapper] pilotpid: 416601
[2025-02-22 14:43:28] 2025-02-22 12:43:28,241 [wrapper] Pilot exit status: 0
[2025-02-22 14:43:28] 2025-02-22 12:43:28,248 [wrapper] pandaids: 6522148434
[2025-02-22 14:43:28] 2025-02-22 12:43:28,282 [wrapper] cleanup supervisor_pilot  636362 416602
[2025-02-22 14:43:28] 2025-02-22 12:43:28,284 [wrapper] Test setup, not cleaning
[2025-02-22 14:43:28] 2025-02-22 12:43:28,288 [wrapper] apfmon messages muted
[2025-02-22 14:43:28] 2025-02-22 12:43:28,290 [wrapper] ==== wrapper stdout END ====
[2025-02-22 14:43:28] 2025-02-22 12:43:28,292 [wrapper] ==== wrapper stderr END ====
[2025-02-22 14:43:28]  *** Error codes and diagnostics ***
[2025-02-22 14:43:28]     "exeErrorCode": 0,
[2025-02-22 14:43:28]     "exeErrorDiag": "",
[2025-02-22 14:43:28]     "pilotErrorCode": 0,
[2025-02-22 14:43:28]     "pilotErrorDiag": "",
[2025-02-22 14:43:28]  *** Listing of results directory ***
[2025-02-22 14:43:28] total 659528
[2025-02-22 14:43:28] -rw-r--r-- 1 ek ek    491065 Feb 21 14:31 pilot3.tar.gz
[2025-02-22 14:43:28] -rw-r--r-- 1 ek ek      5118 Feb 21 14:33 queuedata.json
[2025-02-22 14:43:28] -rwx------ 1 ek ek     35865 Feb 21 14:34 runpilot2-wrapper.sh
[2025-02-22 14:43:28] -rw-rw-r-- 1 ek ek       100 Feb 22 11:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 14:43:28] -rwxr-xr-x 1 ek ek      7986 Feb 22 11:48 run_atlas
[2025-02-22 14:43:28] -rw-rw-r-- 1 ek ek       105 Feb 22 11:48 job.xml
[2025-02-22 14:43:28] -rw-rw-r-- 1 ek ek      9746 Feb 22 11:48 init_data.xml
[2025-02-22 14:43:28] -rw-r--r-- 2 ek ek 341297230 Feb 22 11:48 EVNT.43092757._001162.pool.root.1
[2025-02-22 14:43:28] -rw-r--r-- 2 ek ek     17569 Feb 22 11:48 start_atlas.sh
[2025-02-22 14:43:28] drwxrwx--x 2 ek ek      4096 Feb 22 11:48 shared
[2025-02-22 14:43:28] -rw-r--r-- 2 ek ek    503562 Feb 22 11:48 input.tar.gz
[2025-02-22 14:43:28] -rw-rw-r-- 1 ek ek         0 Feb 22 11:48 boinc_lockfile
[2025-02-22 14:43:28] -rw-rw-r-- 1 ek ek      2556 Feb 22 11:48 pandaJob.out
[2025-02-22 14:43:28] -rw------- 1 ek ek       460 Feb 22 11:48 setup.sh.local
[2025-02-22 14:43:28] -rw------- 1 ek ek    988034 Feb 22 11:48 agis_schedconf.cvmfs.json
[2025-02-22 14:43:28] -rw------- 1 ek ek   1582569 Feb 22 11:48 agis_ddmendpoints.agis.ALL.json
[2025-02-22 14:43:28] drwx------ 4 ek ek      4096 Feb 22 11:48 pilot3
[2025-02-22 14:43:28] -rw------- 1 ek ek 327526032 Feb 22 14:42 HITS.43205075._057493.pool.root.1
[2025-02-22 14:43:28] -rw-rw-r-- 1 ek ek       531 Feb 22 14:42 boinc_task_state.xml
[2025-02-22 14:43:28] -rw------- 1 ek ek        95 Feb 22 14:42 pilot_heartbeat.json
[2025-02-22 14:43:28] -rw------- 1 ek ek      1026 Feb 22 14:43 memory_monitor_summary.json
[2025-02-22 14:43:28] -rw------- 1 ek ek    319179 Feb 22 14:43 log.43205075._057493.job.log.tgz.1
[2025-02-22 14:43:28] -rw------- 1 ek ek      7681 Feb 22 14:43 heartbeat.json
[2025-02-22 14:43:28] -rw-rw-r-- 1 ek ek      8192 Feb 22 14:43 boinc_mmap_file
[2025-02-22 14:43:28] -rw-rw-r-- 1 ek ek        28 Feb 22 14:43 wrapper_checkpoint.txt
[2025-02-22 14:43:28] -rw------- 1 ek ek      4411 Feb 22 14:43 pilotlog.txt
[2025-02-22 14:43:28] -rw------- 1 ek ek   1040127 Feb 22 14:43 log.43205075._057493.job.log.1
[2025-02-22 14:43:28] -rw------- 1 ek ek       357 Feb 22 14:43 output.list
[2025-02-22 14:43:28] -rw-rw-r-- 1 ek ek       620 Feb 22 14:43 runtime_log
[2025-02-22 14:43:28] -rw------- 1 ek ek   1382400 Feb 22 14:43 result.tar.gz
[2025-02-22 14:43:28] -rw------- 1 ek ek       664 Feb 22 14:43 Ug6LDmoPh56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmmIsKDmQ1zVpn.diag
[2025-02-22 14:43:28] -rw-rw-r-- 1 ek ek     11416 Feb 22 14:43 runtime_log.err
[2025-02-22 14:43:28] -rw-rw-r-- 1 ek ek     21581 Feb 22 14:43 stderr.txt
[2025-02-22 14:43:28] HITS file was successfully produced:
[2025-02-22 14:43:28] -rw------- 1 ek ek 327526032 Feb 22 14:42 shared/HITS.pool.root.1
[2025-02-22 14:43:28]  *** Contents of shared directory: ***
[2025-02-22 14:43:28] total 655024
[2025-02-22 14:43:28] -rw-r--r-- 2 ek ek 341297230 Feb 22 11:48 ATLAS.root_0
[2025-02-22 14:43:28] -rw-r--r-- 2 ek ek     17569 Feb 22 11:48 start_atlas.sh
[2025-02-22 14:43:28] -rw-r--r-- 2 ek ek    503562 Feb 22 11:48 input.tar.gz
[2025-02-22 14:43:28] -rw------- 1 ek ek 327526032 Feb 22 14:42 HITS.pool.root.1
[2025-02-22 14:43:28] -rw------- 1 ek ek   1382400 Feb 22 14:43 result.tar.gz
14:43:30 (412848): run_atlas exited; CPU time 40307.661061
14:43:30 (412848): called boinc_finish(0)

</stderr_txt>
]]>

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