Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:51:17 (11447): wrapper (7.7.26015): starting
13:51:17 (11447): wrapper: running run_atlas (--nthreads 8)
[2025-02-21 13:51:17] Arguments: --nthreads 8
[2025-02-21 13:51:17] Threads: 8
[2025-02-21 13:51:17] Checking for CVMFS
[2025-02-21 13:51:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-21 13:51:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-21 13:51:17] Running cvmfs_config stat atlas.cern.ch
[2025-02-21 13:51:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-21 13:51:18] 2.11.2.0 39827 12177 325476 142912 3 339 18264416 18432001 14028 130560 0 58666130 98.936 136492763 38466 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-21 13:51:18] CVMFS is ok
[2025-02-21 13:51:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-21 13:51:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-21 13:51:18] Further information can be found at the LHC@home message board.
[2025-02-21 13:51:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-21 13:51:18] Checking for apptainer binary...
[2025-02-21 13:51:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-21 13:51:18] Running /usr/bin/apptainer --version
[2025-02-21 13:51:18] apptainer version 1.3.2-1.el7
[2025-02-21 13:51:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-21 13:51:19] c-211-15.aglt2.org
[2025-02-21 13:51:19] apptainer works
[2025-02-21 13:51:19] Set ATHENA_PROC_NUMBER=8
[2025-02-21 13:51:19] Set ATHENA_CORE_NUMBER=8
[2025-02-21 13:51:20] Starting ATLAS job with PandaID=6522146110
[2025-02-21 13:51:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-21 19:48:33]  *** The last 200 lines of the pilot log: ***
[2025-02-21 19:48:33] 2025-02-22 00:48:18,730 | INFO     | model: linear, x: [1740163949.0, 1740164010.0, 1740164071.0, 1740164132.0, 1740164193.0, 1740164254.0, 1740164315.0, 1740164376.0, 1740164437.0, 1740164498.0, 1740
[2025-02-21 19:48:33] 2025-02-22 00:48:18,730 | INFO     | sum of square deviations: 12733020197.988401
[2025-02-21 19:48:33] 2025-02-22 00:48:18,732 | INFO     | sum of deviations: 265451057834.92755
[2025-02-21 19:48:33] 2025-02-22 00:48:18,733 | INFO     | mean x: 1740174441.0057971
[2025-02-21 19:48:33] 2025-02-22 00:48:18,733 | INFO     | mean y: 2488542.5362318843
[2025-02-21 19:48:33] 2025-02-22 00:48:18,733 | INFO     | -- intersect: -36275718748.39933
[2025-02-21 19:48:33] 2025-02-22 00:48:18,733 | INFO     | intersect: -36275718748.39933
[2025-02-21 19:48:33] 2025-02-22 00:48:18,733 | INFO     | chi2: 5.291269287610073
[2025-02-21 19:48:33] 2025-02-22 00:48:18,733 | INFO     | current chi2=5.291269287610073 (change=12.987864732790081 %)
[2025-02-21 19:48:33] 2025-02-22 00:48:18,733 | INFO     | right removable region: 344
[2025-02-21 19:48:33] 2025-02-22 00:48:18,733 | INFO     | model: linear, x: [1740164254.0, 1740164315.0, 1740164376.0, 1740164437.0, 1740164498.0, 1740164559.0, 1740164620.0, 1740164681.0, 1740164742.0, 1740164803.0, 1740
[2025-02-21 19:48:33] 2025-02-22 00:48:18,734 | INFO     | sum of square deviations: 12733018977.9884
[2025-02-21 19:48:33] 2025-02-22 00:48:18,736 | INFO     | sum of deviations: 149320787097.05508
[2025-02-21 19:48:33] 2025-02-22 00:48:18,736 | INFO     | mean x: 1740174746.0057971
[2025-02-21 19:48:33] 2025-02-22 00:48:18,736 | INFO     | mean y: 2509164.472463768
[2025-02-21 19:48:33] 2025-02-22 00:48:18,736 | INFO     | -- intersect: -20404612132.464024
[2025-02-21 19:48:33] 2025-02-22 00:48:18,736 | INFO     | intersect: -20404612132.464024
[2025-02-21 19:48:33] 2025-02-22 00:48:18,736 | INFO     | chi2: 3.2540451877852883
[2025-02-21 19:48:33] 2025-02-22 00:48:18,736 | INFO     | current chi2=3.2540451877852883 (change=46.488941564893494 %)
[2025-02-21 19:48:33] 2025-02-22 00:48:18,737 | INFO     | model: linear, x: [1740164559.0, 1740164620.0, 1740164681.0, 1740164742.0, 1740164803.0, 1740164864.0, 1740164925.0, 1740164986.0, 1740165047.0, 1740165108.0, 1740
[2025-02-21 19:48:33] 2025-02-22 00:48:18,737 | INFO     | sum of square deviations: 12187389532.988167
[2025-02-21 19:48:33] 2025-02-22 00:48:18,739 | INFO     | sum of deviations: 75382602485.78821
[2025-02-21 19:48:33] 2025-02-22 00:48:18,739 | INFO     | mean x: 1740174898.5058823
[2025-02-21 19:48:33] 2025-02-22 00:48:18,739 | INFO     | mean y: 2529830.355882353
[2025-02-21 19:48:33] 2025-02-22 00:48:18,739 | INFO     | -- intersect: -10760965688.905874
[2025-02-21 19:48:33] 2025-02-22 00:48:18,739 | INFO     | intersect: -10760965688.905874
[2025-02-21 19:48:33] 2025-02-22 00:48:18,740 | INFO     | chi2: 1.706142512273176
[2025-02-21 19:48:33] 2025-02-22 00:48:18,740 | INFO     | current chi2=1.706142512273176 (change=47.56856731192535 %)
[2025-02-21 19:48:33] 2025-02-22 00:48:18,740 | INFO     | model: linear, x: [1740164864.0, 1740164925.0, 1740164986.0, 1740165047.0, 1740165108.0, 1740165169.0, 1740165230.0, 1740165291.0, 1740165352.0, 1740165413.0, 1740
[2025-02-21 19:48:33] 2025-02-22 00:48:18,741 | INFO     | sum of square deviations: 11657574337.988033
[2025-02-21 19:48:33] 2025-02-22 00:48:18,744 | INFO     | sum of deviations: 29069097484.940292
[2025-02-21 19:48:33] 2025-02-22 00:48:18,744 | INFO     | mean x: 1740175051.0059702
[2025-02-21 19:48:33] 2025-02-22 00:48:18,744 | INFO     | mean y: 2543110.029850746
[2025-02-21 19:48:33] 2025-02-22 00:48:18,744 | INFO     | -- intersect: -4336723081.369273
[2025-02-21 19:48:33] 2025-02-22 00:48:18,744 | INFO     | intersect: -4336723081.369273
[2025-02-21 19:48:33] 2025-02-22 00:48:18,745 | INFO     | chi2: 0.965160644911771
[2025-02-21 19:48:33] 2025-02-22 00:48:18,745 | INFO     | current chi2=0.965160644911771 (change=43.43024466192798 %)
[2025-02-21 19:48:33] 2025-02-22 00:48:18,745 | INFO     | model: linear, x: [1740165169.0, 1740165230.0, 1740165291.0, 1740165352.0, 1740165413.0, 1740165474.0, 1740165535.0, 1740165596.0, 1740165657.0, 1740165718.0, 1740
[2025-02-21 19:48:33] 2025-02-22 00:48:18,746 | INFO     | sum of square deviations: 11143340830.488
[2025-02-21 19:48:33] 2025-02-22 00:48:18,748 | INFO     | sum of deviations: 7122622441.848518
[2025-02-21 19:48:33] 2025-02-22 00:48:18,749 | INFO     | mean x: 1740175203.5060606
[2025-02-21 19:48:33] 2025-02-22 00:48:18,749 | INFO     | mean y: 2549618.5757575757
[2025-02-21 19:48:33] 2025-02-22 00:48:18,749 | INFO     | -- intersect: -1109738980.1296794
[2025-02-21 19:48:33] 2025-02-22 00:48:18,749 | INFO     | intersect: -1109738980.1296794
[2025-02-21 19:48:33] 2025-02-22 00:48:18,750 | INFO     | chi2: 0.8359380715537039
[2025-02-21 19:48:33] 2025-02-22 00:48:18,750 | INFO     | current chi2=0.8359380715537039 (change=13.388711406677778 %)
[2025-02-21 19:48:33] 2025-02-22 00:48:18,750 | INFO     | left removable region: 40
[2025-02-21 19:48:33] 2025-02-22 00:48:18,750 | INFO     | model: linear, x: [1740166389.0, 1740166450.0, 1740166511.0, 1740166572.0, 1740166633.0, 1740166694.0, 1740166755.0, 1740166816.0, 1740166877.0, 1740166938.0, 1740
[2025-02-21 19:48:33] 2025-02-22 00:48:18,750 | INFO     | sum of square deviations: 8711507479.986874
[2025-02-21 19:48:33] 2025-02-22 00:48:18,753 | INFO     | sum of deviations: 11463067985.8421
[2025-02-21 19:48:33] 2025-02-22 00:48:18,753 | INFO     | mean x: 1740175630.506579
[2025-02-21 19:48:33] 2025-02-22 00:48:18,753 | INFO     | mean y: 2562215.5789473685
[2025-02-21 19:48:33] 2025-02-22 00:48:18,753 | INFO     | -- intersect: -2287254053.95063
[2025-02-21 19:48:33] 2025-02-22 00:48:18,753 | INFO     | intersect: -2287254053.95063
[2025-02-21 19:48:33] 2025-02-22 00:48:18,754 | INFO     | chi2: 0.0009730933472383896
[2025-02-21 19:48:33] 2025-02-22 00:48:18,754 | INFO     | -- intersect: -2287254053.95063
[2025-02-21 19:48:33] 2025-02-22 00:48:18,754 | INFO     | current memory leak: 1.32 B/s (using 304 data points, chi2=0.00)
[2025-02-21 19:48:33] 2025-02-22 00:48:18,755 | INFO     | ..............................
[2025-02-21 19:48:33] 2025-02-22 00:48:18,755 | INFO     | . Timing measurements:
[2025-02-21 19:48:33] 2025-02-22 00:48:18,755 | INFO     | . get job = 0 s
[2025-02-21 19:48:33] 2025-02-22 00:48:18,755 | INFO     | . initial setup = 3 s
[2025-02-21 19:48:33] 2025-02-22 00:48:18,755 | INFO     | . payload setup = 13 s
[2025-02-21 19:48:33] 2025-02-22 00:48:18,755 | INFO     | . stage-in = 0 s
[2025-02-21 19:48:33] 2025-02-22 00:48:18,756 | INFO     | . payload execution = 21343 s
[2025-02-21 19:48:33] 2025-02-22 00:48:18,756 | INFO     | . stage-out = 2 s
[2025-02-21 19:48:33] 2025-02-22 00:48:18,756 | INFO     | . log creation = 0 s
[2025-02-21 19:48:33] 2025-02-22 00:48:18,756 | INFO     | ..............................
[2025-02-21 19:48:33] 2025-02-22 00:48:18,886 | INFO     | 
[2025-02-21 19:48:33] 2025-02-22 00:48:18,886 | INFO     | job summary report
[2025-02-21 19:48:33] 2025-02-22 00:48:18,886 | INFO     | --------------------------------------------------
[2025-02-21 19:48:33] 2025-02-22 00:48:18,886 | INFO     | PanDA job id: 6522146110
[2025-02-21 19:48:33] 2025-02-22 00:48:18,886 | INFO     | task id: 43078919
[2025-02-21 19:48:33] 2025-02-22 00:48:18,886 | INFO     | errors: (none)
[2025-02-21 19:48:33] 2025-02-22 00:48:18,886 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-21 19:48:33] 2025-02-22 00:48:18,887 | INFO     | pilot state: finished 
[2025-02-21 19:48:33] 2025-02-22 00:48:18,887 | INFO     | transexitcode: 0
[2025-02-21 19:48:33] 2025-02-22 00:48:18,887 | INFO     | exeerrorcode: 0
[2025-02-21 19:48:33] 2025-02-22 00:48:18,887 | INFO     | exeerrordiag: 
[2025-02-21 19:48:33] 2025-02-22 00:48:18,887 | INFO     | exitcode: 0
[2025-02-21 19:48:33] 2025-02-22 00:48:18,887 | INFO     | exitmsg: OK
[2025-02-21 19:48:33] 2025-02-22 00:48:18,887 | INFO     | cpuconsumptiontime: 121212 s
[2025-02-21 19:48:33] 2025-02-22 00:48:18,887 | INFO     | nevents: 400
[2025-02-21 19:48:33] 2025-02-22 00:48:18,887 | INFO     | neventsw: 0
[2025-02-21 19:48:33] 2025-02-22 00:48:18,887 | INFO     | pid: 3982
[2025-02-21 19:48:33] 2025-02-22 00:48:18,888 | INFO     | pgrp: 3982
[2025-02-21 19:48:33] 2025-02-22 00:48:18,888 | INFO     | corecount: 8
[2025-02-21 19:48:33] 2025-02-22 00:48:18,888 | INFO     | event service: False
[2025-02-21 19:48:33] 2025-02-22 00:48:18,888 | INFO     | sizes: {0: 2383312, 1: 2383312, 10: 2383546, 12: 2383574, 21360: 2417712, 21363: 2426653, 21365: 2426837, 21376: 2427007}
[2025-02-21 19:48:33] 2025-02-22 00:48:18,888 | INFO     | --------------------------------------------------
[2025-02-21 19:48:33] 2025-02-22 00:48:18,888 | INFO     | 
[2025-02-21 19:48:33] 2025-02-22 00:48:18,888 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-21 19:48:33] 2025-02-22 00:48:18,929 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-21 19:48:33] 2025-02-22 00:48:18,929 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-21 19:48:33] 2025-02-22 00:48:18,929 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-21 19:48:33] 2025-02-22 00:48:18,930 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-21 19:48:33] 2025-02-22 00:48:18,930 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-21 19:48:33] 2025-02-22 00:48:18,930 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-21 19:48:33] 2025-02-22 00:48:18,930 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-21 19:48:33] 2025-02-22 00:48:18,930 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-21 19:48:33] 2025-02-22 00:48:18,930 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-21 19:48:33] 2025-02-22 00:48:18,930 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-21 19:48:33] 2025-02-22 00:48:18,930 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-21 19:48:33] 2025-02-22 00:48:18,931 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-21 19:48:33] 2025-02-22 00:48:18,931 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-21 19:48:33] 2025-02-22 00:48:18,931 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-21 19:48:33] 2025-02-22 00:48:18,931 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-21 19:48:33] 2025-02-22 00:48:18,931 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-21 19:48:33] 2025-02-22 00:48:18,931 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-21 19:48:33] 2025-02-22 00:48:18,931 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-21 19:48:33] 2025-02-22 00:48:18,931 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-21 19:48:33] 2025-02-22 00:48:18,932 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-21 19:48:33] 2025-02-22 00:48:18,932 | INFO     | job 6522146110 has completed (purged errors)
[2025-02-21 19:48:33] 2025-02-22 00:48:18,932 | INFO     | overall cleanup function is called
[2025-02-21 19:48:33] 2025-02-22 00:48:19,940 | INFO     | --- collectZombieJob: --- 10, [3982]
[2025-02-21 19:48:33] 2025-02-22 00:48:19,940 | INFO     | zombie collector waiting for pid 3982
[2025-02-21 19:48:33] 2025-02-22 00:48:19,941 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-21 19:48:33] 2025-02-22 00:48:19,941 | INFO     | collected zombie processes
[2025-02-21 19:48:33] 2025-02-22 00:48:19,941 | INFO     | will attempt to kill all subprocesses of pid=3982
[2025-02-21 19:48:33] 2025-02-22 00:48:20,152 | INFO     | PID=18557 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-02-21 19:48:33] 2025-02-22 00:48:20,152 | INFO     | .. there are 31 such processes running
[2025-02-21 19:48:33] 2025-02-22 00:48:20,280 | INFO     | process IDs to be killed: [3982] (in reverse order)
[2025-02-21 19:48:33] 2025-02-22 00:48:20,435 | WARNING  | found no corresponding commands to process id(s)
[2025-02-21 19:48:33] 2025-02-22 00:48:20,435 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-21 19:48:33] 2025-02-22 00:48:20,447 | INFO     | did not find any defunct processes belonging to 3982
[2025-02-21 19:48:33] 2025-02-22 00:48:20,459 | INFO     | did not find any defunct processes belonging to 3982
[2025-02-21 19:48:33] 2025-02-22 00:48:20,459 | INFO     | ready for new job
[2025-02-21 19:48:33] 2025-02-22 00:48:20,460 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-21 19:48:33] 2025-02-22 00:48:20,462 | INFO     | **************************************
[2025-02-21 19:48:33] 2025-02-22 00:48:20,462 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-21 19:48:33] 2025-02-22 00:48:20,462 | INFO     | **************************************
[2025-02-21 19:48:33] 2025-02-22 00:48:20,462 | INFO     | 
[2025-02-21 19:48:33] 2025-02-22 00:48:20,465 | INFO     | architecture information:
[2025-02-21 19:48:33] 2025-02-22 00:48:20,465 | INFO     | executing command: cat /etc/os-release
[2025-02-21 19:48:33] 2025-02-22 00:48:20,486 | INFO     | cat /etc/os-release:
[2025-02-21 19:48:33] NAME="CentOS Linux"
[2025-02-21 19:48:33] VERSION="7 (Core)"
[2025-02-21 19:48:33] ID="centos"
[2025-02-21 19:48:33] ID_LIKE="rhel fedora"
[2025-02-21 19:48:33] VERSION_ID="7"
[2025-02-21 19:48:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-21 19:48:33] ANSI_COLOR="0;31"
[2025-02-21 19:48:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-21 19:48:33] HOME_URL="https://www.centos.org/"
[2025-02-21 19:48:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-21 19:48:33] 
[2025-02-21 19:48:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-21 19:48:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-21 19:48:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-21 19:48:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-21 19:48:33] 
[2025-02-21 19:48:33] 2025-02-22 00:48:20,486 | INFO     | **************************************
[2025-02-21 19:48:33] 2025-02-22 00:48:20,989 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-21 19:48:33] 2025-02-22 00:48:21,006 | INFO     | sufficient remaining disk space (55248420864 B)
[2025-02-21 19:48:33] 2025-02-22 00:48:21,007 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-21 19:48:33] 2025-02-22 00:48:21,007 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-21 19:48:33] 2025-02-22 00:48:21,007 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-21 19:48:33] 2025-02-22 00:48:21,008 | INFO     | aborting loop
[2025-02-21 19:48:33] 2025-02-22 00:48:21,007 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-21 19:48:33] 2025-02-22 00:48:21,008 | INFO     | found 0 job(s) in 20 queues
[2025-02-21 19:48:33] 2025-02-22 00:48:21,008 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-21 19:48:33] 2025-02-22 00:48:21,008 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-21 19:48:33] 2025-02-22 00:48:21,326 | INFO     | all payload control threads have been joined
[2025-02-21 19:48:33] 2025-02-22 00:48:21,629 | INFO     | all data control threads have been joined
[2025-02-21 19:48:33] 2025-02-22 00:48:21,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-21 19:48:33] 2025-02-22 00:48:22,012 | INFO     | [job] retrieve thread has finished
[2025-02-21 19:48:33] 2025-02-22 00:48:22,013 | INFO     | [job] job monitor thread has finished
[2025-02-21 19:48:33] 2025-02-22 00:48:22,053 | INFO     | [payload] failed_post thread has finished
[2025-02-21 19:48:33] 2025-02-22 00:48:22,070 | INFO     | [data] copytool_in thread has finished
[2025-02-21 19:48:33] 2025-02-22 00:48:22,166 | INFO     | [payload] validate_pre thread has finished
[2025-02-21 19:48:33] 2025-02-22 00:48:22,259 | INFO     | all job control threads have been joined
[2025-02-21 19:48:33] 2025-02-22 00:48:22,330 | INFO     | [payload] control thread has finished
[2025-02-21 19:48:33] 2025-02-22 00:48:22,346 | INFO     | [payload] validate_post thread has finished
[2025-02-21 19:48:33] 2025-02-22 00:48:22,610 | INFO     | [payload] execute_payloads thread has finished
[2025-02-21 19:48:33] 2025-02-22 00:48:22,634 | INFO     | [data] control thread has finished
[2025-02-21 19:48:33] 2025-02-22 00:48:22,690 | INFO     | [job] create_data_payload thread has finished
[2025-02-21 19:48:33] 2025-02-22 00:48:22,723 | INFO     | [job] validate thread has finished
[2025-02-21 19:48:33] 2025-02-22 00:48:22,956 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-21 19:48:33] 2025-02-22 00:48:23,197 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-21 19:48:33] 2025-02-22 00:48:23,263 | INFO     | [job] control thread has finished
[2025-02-21 19:48:33] 2025-02-22 00:48:23,641 | INFO     | [data] copytool_out thread has finished
[2025-02-21 19:48:33] 2025-02-22 00:48:23,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-21 19:48:33] 2025-02-22 00:48:24,909 | INFO     | [job] queue monitor thread has finished
[2025-02-21 19:48:33] 2025-02-22 00:48:27,203 | INFO     | [data] queue_monitor thread has finished
[2025-02-21 19:48:33] 2025-02-22 00:48:27,955 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140089330386752)>', '<ExcThread(monitor, started 140089032152832)>']
[2025-02-21 19:48:33] 2025-02-22 00:48:28,043 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-21 19:48:33] 2025-02-22 00:48:28,043 | INFO     | [monitor] control thread has ended
[2025-02-21 19:48:33] 2025-02-22 00:48:32,967 | INFO     | all workflow threads have been joined
[2025-02-21 19:48:33] 2025-02-22 00:48:32,967 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-21 19:48:33] 2025-02-22 00:48:32,968 | INFO     | traces error code: 0
[2025-02-21 19:48:33] 2025-02-22 00:48:32,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-21 19:48:33] 2025-02-22 00:48:33,132 [wrapper] ==== pilot stdout END ====
[2025-02-21 19:48:33] 2025-02-22 00:48:33,147 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-21 19:48:33] 2025-02-22 00:48:33,149 [wrapper] pilotpid: 18557
[2025-02-21 19:48:33] 2025-02-22 00:48:33,152 [wrapper] Pilot exit status: 0
[2025-02-21 19:48:33] 2025-02-22 00:48:33,225 [wrapper] pandaids: 6522146110
[2025-02-21 19:48:33] 2025-02-22 00:48:33,386 [wrapper] cleanup supervisor_pilot  2941 18558
[2025-02-21 19:48:33] 2025-02-22 00:48:33,417 [wrapper] Test setup, not cleaning
[2025-02-21 19:48:33] 2025-02-22 00:48:33,460 [wrapper] apfmon messages muted
[2025-02-21 19:48:33] 2025-02-22 00:48:33,463 [wrapper] ==== wrapper stdout END ====
[2025-02-21 19:48:33] 2025-02-22 00:48:33,466 [wrapper] ==== wrapper stderr END ====
[2025-02-21 19:48:33]  *** Error codes and diagnostics ***
[2025-02-21 19:48:33]     "exeErrorCode": 0,
[2025-02-21 19:48:33]     "exeErrorDiag": "",
[2025-02-21 19:48:33]     "pilotErrorCode": 0,
[2025-02-21 19:48:33]     "pilotErrorDiag": "",
[2025-02-21 19:48:33]  *** Listing of results directory ***
[2025-02-21 19:48:33] total 666640
[2025-02-21 19:48:33] -rw-r--r-- 1 boincer umatlas    491065 Feb 21 05:52 pilot3.tar.gz
[2025-02-21 19:48:33] -rw-r--r-- 1 boincer umatlas      5118 Feb 21 06:04 queuedata.json
[2025-02-21 19:48:33] -rwx------ 1 boincer umatlas     35865 Feb 21 06:05 runpilot2-wrapper.sh
[2025-02-21 19:48:33] -rw-r--r-- 1 boincer umatlas       100 Feb 21 13:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-21 19:48:33] -rwxr-xr-x 1 boincer umatlas      7986 Feb 21 13:51 run_atlas
[2025-02-21 19:48:33] -rw-r--r-- 1 boincer umatlas       105 Feb 21 13:51 job.xml
[2025-02-21 19:48:33] -rw-r--r-- 2 boincer umatlas 344960182 Feb 21 13:51 EVNT.43078917._002030.pool.root.1
[2025-02-21 19:48:33] -rw-r--r-- 2 boincer umatlas     17569 Feb 21 13:51 start_atlas.sh
[2025-02-21 19:48:33] drwxrwx--x 2 boincer umatlas      4096 Feb 21 13:51 shared
[2025-02-21 19:48:33] -rw-r--r-- 2 boincer umatlas    503560 Feb 21 13:51 input.tar.gz
[2025-02-21 19:48:33] -rw-r--r-- 1 boincer umatlas         0 Feb 21 13:51 boinc_lockfile
[2025-02-21 19:48:33] -rw-r--r-- 1 boincer umatlas      2547 Feb 21 13:51 pandaJob.out
[2025-02-21 19:48:33] -rw------- 1 boincer umatlas       467 Feb 21 13:51 setup.sh.local
[2025-02-21 19:48:33] -rw------- 1 boincer umatlas    987293 Feb 21 13:51 agis_schedconf.cvmfs.json
[2025-02-21 19:48:33] drwx------ 4 boincer umatlas      4096 Feb 21 13:51 pilot3
[2025-02-21 19:48:33] -rw------- 1 boincer umatlas 327887352 Feb 21 19:47 HITS.43078919._082696.pool.root.1
[2025-02-21 19:48:33] -rw-r--r-- 1 boincer umatlas       533 Feb 21 19:47 boinc_task_state.xml
[2025-02-21 19:48:33] -rw-r--r-- 1 boincer umatlas      6135 Feb 21 19:47 init_data.xml
[2025-02-21 19:48:33] -rw------- 1 boincer umatlas      1061 Feb 21 19:48 memory_monitor_summary.json
[2025-02-21 19:48:33] -rw------- 1 boincer umatlas   1582569 Feb 21 19:48 agis_ddmendpoints.agis.ALL.json
[2025-02-21 19:48:33] -rw------- 1 boincer umatlas    492245 Feb 21 19:48 log.43078919._082696.job.log.tgz.1
[2025-02-21 19:48:33] -rw------- 1 boincer umatlas        95 Feb 21 19:48 pilot_heartbeat.json
[2025-02-21 19:48:33] -rw------- 1 boincer umatlas      7771 Feb 21 19:48 heartbeat.json
[2025-02-21 19:48:33] -rw-r--r-- 1 boincer umatlas      8192 Feb 21 19:48 boinc_mmap_file
[2025-02-21 19:48:33] -rw-r--r-- 1 boincer umatlas        29 Feb 21 19:48 wrapper_checkpoint.txt
[2025-02-21 19:48:33] -rw------- 1 boincer umatlas      4338 Feb 21 19:48 pilotlog.txt
[2025-02-21 19:48:33] -rw------- 1 boincer umatlas   2503651 Feb 21 19:48 log.43078919._082696.job.log.1
[2025-02-21 19:48:33] -rw------- 1 boincer umatlas       357 Feb 21 19:48 output.list
[2025-02-21 19:48:33] -rw-r--r-- 1 boincer umatlas       620 Feb 21 19:48 runtime_log
[2025-02-21 19:48:33] -rw------- 1 boincer umatlas   3010560 Feb 21 19:48 result.tar.gz
[2025-02-21 19:48:33] -rw-r--r-- 1 boincer umatlas     11419 Feb 21 19:48 runtime_log.err
[2025-02-21 19:48:33] -rw------- 1 boincer umatlas       663 Feb 21 19:48 ILtMDmg1f56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmPAsKDmDRGrwm.diag
[2025-02-21 19:48:33] -rw-r--r-- 1 boincer umatlas     21758 Feb 21 19:48 stderr.txt
[2025-02-21 19:48:33] HITS file was successfully produced:
[2025-02-21 19:48:33] -rw------- 1 boincer umatlas 327887352 Feb 21 19:47 shared/HITS.pool.root.1
[2025-02-21 19:48:33]  *** Contents of shared directory: ***
[2025-02-21 19:48:33] total 660536
[2025-02-21 19:48:33] -rw-r--r-- 2 boincer umatlas 344960182 Feb 21 13:51 ATLAS.root_0
[2025-02-21 19:48:33] -rw-r--r-- 2 boincer umatlas     17569 Feb 21 13:51 start_atlas.sh
[2025-02-21 19:48:33] -rw-r--r-- 2 boincer umatlas    503560 Feb 21 13:51 input.tar.gz
[2025-02-21 19:48:33] -rw------- 1 boincer umatlas 327887352 Feb 21 19:47 HITS.pool.root.1
[2025-02-21 19:48:33] -rw------- 1 boincer umatlas   3010560 Feb 21 19:48 result.tar.gz
19:48:35 (11447): run_atlas exited; CPU time 120857.719044
19:48:35 (11447): called boinc_finish(0)

</stderr_txt>
]]>

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