Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-21 16:15:17 (66197): Detected: vboxwrapper 26206
2025-02-21 16:15:17 (66197): Detected: BOINC client v7.20.2
2025-02-21 16:15:17 (66197): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-02-21 16:15:17 (66197): Successfully copied 'init_data.xml' to the shared directory.
2025-02-21 16:15:17 (66197): Create VM. (boinc_5e6e561c43f967cf, slot#6)
2025-02-21 16:15:18 (66197): Setting Memory Size for VM. (4800MB)
2025-02-21 16:15:18 (66197): Setting CPU Count for VM. (8)
2025-02-21 16:15:18 (66197): Setting Chipset Options for VM.
2025-02-21 16:15:18 (66197): Setting Graphics Controller Options for VM.
2025-02-21 16:15:18 (66197): Setting Boot Options for VM.
2025-02-21 16:15:18 (66197): Setting Network Configuration for NAT.
2025-02-21 16:15:19 (66197): Enabling VM Network Access.
2025-02-21 16:15:19 (66197): Disabling USB Support for VM.
2025-02-21 16:15:19 (66197): Disabling COM Port Support for VM.
2025-02-21 16:15:19 (66197): Disabling LPT Port Support for VM.
2025-02-21 16:15:19 (66197): Disabling Audio Support for VM.
2025-02-21 16:15:19 (66197): Disabling Clipboard Support for VM.
2025-02-21 16:15:20 (66197): Disabling Drag and Drop Support for VM.
2025-02-21 16:15:20 (66197): Adding storage controller(s) to VM.
2025-02-21 16:15:20 (66197): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-21 16:15:22 (66197): Adding VirtualBox Guest Additions to VM.
2025-02-21 16:15:22 (66197): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-21 16:15:22 (66197): forwarding host port 57437 to guest port 80
2025-02-21 16:15:22 (66197): Enabling remote desktop for VM.
2025-02-21 16:15:22 (66197): Required extension pack not installed, remote desktop not enabled.
2025-02-21 16:15:22 (66197): Enabling shared directory for VM.
2025-02-21 16:15:22 (66197): Starting VM using VBoxManage interface. (boinc_5e6e561c43f967cf, slot#6)
2025-02-21 16:15:24 (66197): Successfully started VM. (PID = '66813')
2025-02-21 16:15:24 (66197): Reporting VM Process ID to BOINC.
2025-02-21 16:15:24 (66197): Guest Log: BIOS: VirtualBox 7.1.6
2025-02-21 16:15:24 (66197): Guest Log: CPUID EDX: 0x178bfbff
2025-02-21 16:15:24 (66197): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-21 16:15:24 (66197): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-21 16:15:24 (66197): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-21 16:15:24 (66197): Detected: Web Application Enabled (http://localhost:57437)
2025-02-21 16:15:24 (66197): Preference change detected
2025-02-21 16:15:24 (66197): Setting CPU throttle for VM. (80%)
2025-02-21 16:15:24 (66197): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-21 16:15:26 (66197): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-21 16:15:26 (66197): Guest Log: BIOS: Booting from Hard Disk...
2025-02-21 16:15:29 (66197): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-21 16:15:29 (66197): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-21 16:15:29 (66197): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-21 16:15:41 (66197): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-21 16:15:41 (66197): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-21 16:15:59 (66197): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-21 16:15:59 (66197): Guest Log: 00:00:00.000919 main     Log opened 2025-02-21T21:15:57.239711000Z
2025-02-21 16:15:59 (66197): Guest Log: 00:00:00.001754 main     OS Product: Linux
2025-02-21 16:15:59 (66197): Guest Log: 00:00:00.002000 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-21 16:15:59 (66197): Guest Log: 00:00:00.002142 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-21 16:15:59 (66197): Guest Log: 00:00:00.002260 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-21 16:15:59 (66197): Guest Log: 00:00:00.002264 main     Process ID: 1380
2025-02-21 16:15:59 (66197): Guest Log: 00:00:00.002266 main     Package type: LINUX_64BITS_GENERIC
2025-02-21 16:15:59 (66197): Guest Log: 00:00:00.006310 main     5.2.32 r132073 started. Verbose level = 0
2025-02-21 16:15:59 (66197): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-21 16:15:59 (66197): Guest Log: [INFO] Mounting shared directory
2025-02-21 16:16:00 (66197): Guest Log: [INFO] Checking for init_data.xml
2025-02-21 16:16:07 (66197): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-21 16:16:07 (66197): Guest Log: [INFO] Detected branch: prod
2025-02-21 16:16:08 (66197): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-21 16:16:08 (66197): Guest Log: Copying input files
2025-02-21 16:16:13 (66197): Guest Log: Copied input files into RunAtlas.
2025-02-21 16:16:13 (66197): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-21 16:16:13 (66197): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-21 16:16:13 (66197): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-21 16:16:13 (66197): Guest Log: Further information can be found at the LHC@home message board.
2025-02-21 16:16:25 (66197): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-21 16:16:25 (66197): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-21 16:16:25 (66197): Guest Log: 2.6.3.0 1676 0 32204 142916 3 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-21 16:16:26 (66197): Guest Log: copied the webapp to /var/www
2025-02-21 16:16:26 (66197): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-21 16:16:26 (66197): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-21 16:16:26 (66197): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-21 16:16:26 (66197): Guest Log:  *** Starting ATLAS job. (PandaID=6522295306 taskID=43078919) ***
2025-02-21 17:54:27 (66197): Status Report: Elapsed Time: '6000.000000'
2025-02-21 17:54:27 (66197): Status Report: CPU Time: '28621.780000'
2025-02-21 19:33:30 (66197): Status Report: Elapsed Time: '12000.000000'
2025-02-21 19:33:30 (66197): Status Report: CPU Time: '66554.580000'
2025-02-21 21:12:33 (66197): Status Report: Elapsed Time: '18000.000000'
2025-02-21 21:12:33 (66197): Status Report: CPU Time: '104485.040000'
2025-02-21 22:51:36 (66197): Status Report: Elapsed Time: '24000.000000'
2025-02-21 22:51:36 (66197): Status Report: CPU Time: '142415.510000'
2025-02-22 00:30:40 (66197): Status Report: Elapsed Time: '30000.000000'
2025-02-22 00:30:40 (66197): Status Report: CPU Time: '180334.630000'
2025-02-22 02:09:43 (66197): Status Report: Elapsed Time: '36000.000000'
2025-02-22 02:09:43 (66197): Status Report: CPU Time: '218266.910000'
2025-02-22 03:48:46 (66197): Status Report: Elapsed Time: '42000.000000'
2025-02-22 03:48:46 (66197): Status Report: CPU Time: '256206.550000'
2025-02-22 05:27:50 (66197): Status Report: Elapsed Time: '48000.000000'
2025-02-22 05:27:50 (66197): Status Report: CPU Time: '294126.790000'
2025-02-22 07:06:53 (66197): Status Report: Elapsed Time: '54000.000000'
2025-02-22 07:06:53 (66197): Status Report: CPU Time: '332048.740000'
2025-02-22 07:25:00 (66197): Guest Log:  *** Job finished ***
2025-02-22 07:25:00 (66197): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-22 07:25:00 (66197): Guest Log: 2025-02-22 12:32:46,466 | INFO     | [payload] control thread has finished
2025-02-22 07:25:00 (66197): Guest Log: 2025-02-22 12:32:46,865 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-02-22 07:25:00 (66197): Guest Log: 2025-02-22 12:32:51,009 | INFO     | [data] queue_monitor thread has finished
2025-02-22 07:25:00 (66197): Guest Log: 2025-02-22 12:32:51,391 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140076647761728)>', '<ExcThread(monitor, started 140075962709760)>']
2025-02-22 07:25:00 (66197): Guest Log: 2025-02-22 12:32:51,796 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-22 07:25:00 (66197): Guest Log: 2025-02-22 12:32:51,797 | INFO     | [monitor] control thread has ended
2025-02-22 07:25:00 (66197): Guest Log: 2025-02-22 12:32:56,407 | INFO     | all workflow threads have been joined
2025-02-22 07:25:00 (66197): Guest Log: 2025-02-22 12:32:56,408 | INFO     | end of generic workflow (traces error code: 0)
2025-02-22 07:25:00 (66197): Guest Log: 2025-02-22 12:32:56,408 | INFO     | traces error code: 0
2025-02-22 07:25:00 (66197): Guest Log: 2025-02-22 12:32:56,409 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-22 07:25:00 (66197): Guest Log: 2025-02-22 12:32:56,553 [wrapper] ==== pilot stdout END ====
2025-02-22 07:25:00 (66197): Guest Log: 2025-02-22 12:32:56,564 [wrapper] ==== wrapper stdout RESUME ====
2025-02-22 07:25:00 (66197): Guest Log: 2025-02-22 12:32:56,575 [wrapper] pilotpid: 6034
2025-02-22 07:25:00 (66197): Guest Log: 2025-02-22 12:32:56,585 [wrapper] Pilot exit status: 0
2025-02-22 07:25:00 (66197): Guest Log: 2025-02-22 12:32:56,672 [wrapper] pandaids: 6522295306
2025-02-22 07:25:00 (66197): Guest Log: 2025-02-22 12:32:56,744 [wrapper] cleanup supervisor_pilot  9663 6035
2025-02-22 07:25:00 (66197): Guest Log: 2025-02-22 12:32:56,756 [wrapper] Test setup, not cleaning
2025-02-22 07:25:00 (66197): Guest Log: 2025-02-22 12:32:56,779 [wrapper] apfmon messages muted
2025-02-22 07:25:00 (66197): Guest Log: 2025-02-22 12:32:56,790 [wrapper] ==== wrapper stdout END ====
2025-02-22 07:25:00 (66197): Guest Log: 2025-02-22 12:32:56,802 [wrapper] ==== wrapper stderr END ====
2025-02-22 07:25:00 (66197): Guest Log:  *** Error codes and diagnostics ***
2025-02-22 07:25:00 (66197): Guest Log:     "exeErrorCode": 0,
2025-02-22 07:25:00 (66197): Guest Log:     "exeErrorDiag": "",
2025-02-22 07:25:00 (66197): Guest Log:     "pilotErrorCode": 0,
2025-02-22 07:25:00 (66197): Guest Log:     "pilotErrorDiag": "",
2025-02-22 07:25:00 (66197): Guest Log:  *** Listing of results directory ***
2025-02-22 07:25:00 (66197): Guest Log: total 338044
2025-02-22 07:25:00 (66197): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 21 12:55 pilot3.tar.gz
2025-02-22 07:25:00 (66197): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 21 12:57 queuedata.json
2025-02-22 07:25:00 (66197): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 21 12:58 runpilot2-wrapper.sh
2025-02-22 07:25:00 (66197): Guest Log: -rw-r--r--. 1 atlas atlas      6435 Feb 21 21:16 init_data.xml
2025-02-22 07:25:00 (66197): Guest Log: -rw-r--r--. 1 atlas atlas    503561 Feb 21 21:16 input.tar.gz
2025-02-22 07:25:00 (66197): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Feb 21 21:16 start_atlas.sh
2025-02-22 07:25:00 (66197): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 21 21:16 EVNT.43078917._002222.pool.root.1 -> /data/./ATLAS.root_0
2025-02-22 07:25:00 (66197): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Feb 21 21:16 pandaJob.out
2025-02-22 07:25:00 (66197): Guest Log: -rw-------. 1 atlas atlas       424 Feb 21 21:16 setup.sh.local
2025-02-22 07:25:00 (66197): Guest Log: -rw-------. 1 atlas atlas    987681 Feb 21 21:17 agis_schedconf.cvmfs.json
2025-02-22 07:25:00 (66197): Guest Log: drwx------. 4 atlas atlas      4096 Feb 21 21:17 pilot3
2025-02-22 07:25:00 (66197): Guest Log: -rw-------. 1 atlas atlas 329266151 Feb 22 12:31 HITS.43078919._083468.pool.root.1
2025-02-22 07:25:00 (66197): Guest Log: -rw-------. 1 atlas atlas        95 Feb 22 12:32 pilot_heartbeat.json
2025-02-22 07:25:00 (66197): Guest Log: -rw-------. 1 atlas atlas      1022 Feb 22 12:32 memory_monitor_summary.json
2025-02-22 07:25:00 (66197): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 22 12:32 agis_ddmendpoints.agis.ALL.json
2025-02-22 07:25:00 (66197): Guest Log: -rw-------. 1 atlas atlas    771920 Feb 22 12:32 log.43078919._083468.job.log.tgz.1
2025-02-22 07:25:00 (66197): Guest Log: -rw-------. 1 atlas atlas      7682 Feb 22 12:32 heartbeat.json
2025-02-22 07:25:00 (66197): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 22 12:32 pilotlog.txt
2025-02-22 07:25:00 (66197): Guest Log: -rw-------. 1 atlas atlas   5806683 Feb 22 12:32 log.43078919._083468.job.log.1
2025-02-22 07:25:00 (66197): Guest Log: -rw-------. 1 atlas atlas       357 Feb 22 12:32 output.list
2025-02-22 07:25:00 (66197): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 22 12:32 runtime_log
2025-02-22 07:25:00 (66197): Guest Log: -rw-------. 1 atlas atlas   6594560 Feb 22 12:32 result.tar.gz
2025-02-22 07:25:00 (66197): Guest Log: -rw-r--r--. 1 atlas atlas     10929 Feb 22 12:32 runtime_log.err
2025-02-22 07:25:00 (66197): Guest Log: -rw-------. 1 atlas atlas       661 Feb 22 12:32 CL0NDmymh56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmzKsKDmKxtqHn.diag
2025-02-22 07:25:00 (66197): Guest Log: Looking for outputfile HITS.43078919._083468.pool.root.1
2025-02-22 07:25:00 (66197): Guest Log: HITS file was successfully produced
2025-02-22 07:25:00 (66197): Guest Log: -rw-------. 1 atlas atlas 329266151 Feb 22 12:31 /home/atlas/RunAtlas/HITS.43078919._083468.pool.root.1
2025-02-22 07:25:00 (66197): Guest Log: Successfully finished the ATLAS job!
2025-02-22 07:25:00 (66197): Guest Log: Copying the results back to the shared directory!
2025-02-22 07:25:01 (66197): Guest Log:  *** Contents of shared directory: ***
2025-02-22 07:25:01 (66197): Guest Log: total 341300
2025-02-22 07:25:01 (66197): Guest Log: -rw-r--r--. 1 root root 342360809 Feb 21 21:15 ATLAS.root_0
2025-02-22 07:25:01 (66197): Guest Log: -rw-r--r--. 1 root root      6435 Feb 21 21:15 init_data.xml
2025-02-22 07:25:01 (66197): Guest Log: -rw-r--r--. 1 root root    503561 Feb 21 21:15 input.tar.gz
2025-02-22 07:25:01 (66197): Guest Log: -rw-r--r--. 1 root root   6594560 Feb 22 12:25 result.tar.gz
2025-02-22 07:25:01 (66197): Guest Log: -rw-r--r--. 1 root root     17569 Feb 21 21:15 start_atlas.sh
2025-02-22 07:25:01 (66197): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-22 07:25:01 (66197): VM Completion File Detected.
2025-02-22 07:25:01 (66197): Powering off VM.
2025-02-22 07:25:02 (66197): Successfully stopped VM.
2025-02-22 07:25:02 (66197): Deregistering VM. (boinc_5e6e561c43f967cf, slot#6)
2025-02-22 07:25:02 (66197): Removing network bandwidth throttle group from VM.
2025-02-22 07:25:02 (66197): Removing VM from VirtualBox.
07:25:07 (66197): called boinc_finish(0)

</stderr_txt>
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