Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:25:59 (11282): wrapper (7.7.26015): starting
10:25:59 (11282): wrapper: running run_atlas (--nthreads 10)
[2025-02-21 10:25:59] Arguments: --nthreads 10
[2025-02-21 10:25:59] Threads: 10
[2025-02-21 10:25:59] Checking for CVMFS
[2025-02-21 10:26:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-21 10:26:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-21 10:26:02] Running cvmfs_config stat atlas.cern.ch
[2025-02-21 10:26:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-21 10:26:07] 2.11.2.0 39388 4334 209200 142907 0 224 16923721 18432001 12565 130560 1 12342001 98.667 39379258 28881 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-21 10:26:07] CVMFS is ok
[2025-02-21 10:26:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-21 10:26:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-21 10:26:07] Further information can be found at the LHC@home message board.
[2025-02-21 10:26:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-21 10:26:07] Checking for apptainer binary...
[2025-02-21 10:26:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-21 10:26:07] Running /usr/bin/apptainer --version
[2025-02-21 10:26:07] apptainer version 1.3.2-1.el7
[2025-02-21 10:26:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-21 10:26:44] c-16-17.aglt2.org
[2025-02-21 10:26:44] apptainer works
[2025-02-21 10:26:44] Set ATHENA_PROC_NUMBER=10
[2025-02-21 10:26:44] Set ATHENA_CORE_NUMBER=10
[2025-02-21 10:26:44] Starting ATLAS job with PandaID=6522147341
[2025-02-21 10:26:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-21 23:34:29]  *** The last 200 lines of the pilot log: ***
[2025-02-21 23:34:29] 2025-02-22 04:34:12,570 | INFO     | current chi2=7.630367148098653 (change=31.15978956152795 %)
[2025-02-21 23:34:29] 2025-02-22 04:34:12,571 | INFO     | model: linear, x: [1740153174.0, 1740153235.0, 1740153296.0, 1740153357.0, 1740153418.0, 1740153479.0, 1740153540.0, 1740153601.0, 1740153662.0, 1740153723.0, 1740
[2025-02-21 23:34:29] 2025-02-22 04:34:12,571 | INFO     | sum of square deviations: 130291329672.75575
[2025-02-21 23:34:29] 2025-02-22 04:34:12,589 | INFO     | sum of deviations: 892627988071.8141
[2025-02-21 23:34:29] 2025-02-22 04:34:12,589 | INFO     | mean x: 1740175988.1975968
[2025-02-21 23:34:29] 2025-02-22 04:34:12,589 | INFO     | mean y: 2606301.008010681
[2025-02-21 23:34:29] 2025-02-22 04:34:12,590 | INFO     | -- intersect: -11919367288.002855
[2025-02-21 23:34:29] 2025-02-22 04:34:12,590 | INFO     | intersect: -11919367288.002855
[2025-02-21 23:34:29] 2025-02-22 04:34:12,591 | INFO     | chi2: 5.358370050876332
[2025-02-21 23:34:29] 2025-02-22 04:34:12,591 | INFO     | current chi2=5.358370050876332 (change=29.77572445892673 %)
[2025-02-21 23:34:29] 2025-02-22 04:34:12,592 | INFO     | model: linear, x: [1740153479.0, 1740153540.0, 1740153601.0, 1740153662.0, 1740153723.0, 1740153785.0, 1740153845.0, 1740153906.0, 1740153967.0, 1740154029.0, 1740
[2025-02-21 23:34:29] 2025-02-22 04:34:12,592 | INFO     | sum of square deviations: 127699310352.55923
[2025-02-21 23:34:29] 2025-02-22 04:34:12,611 | INFO     | sum of deviations: 720869890775.817
[2025-02-21 23:34:29] 2025-02-22 04:34:12,611 | INFO     | mean x: 1740176140.6989248
[2025-02-21 23:34:29] 2025-02-22 04:34:12,611 | INFO     | mean y: 2616404.7715053763
[2025-02-21 23:34:29] 2025-02-22 04:34:12,611 | INFO     | -- intersect: -9820777167.308004
[2025-02-21 23:34:29] 2025-02-22 04:34:12,612 | INFO     | intersect: -9820777167.308004
[2025-02-21 23:34:29] 2025-02-22 04:34:12,613 | INFO     | chi2: 3.7496480862771056
[2025-02-21 23:34:29] 2025-02-22 04:34:12,613 | INFO     | current chi2=3.7496480862771056 (change=30.022599210670958 %)
[2025-02-21 23:34:29] 2025-02-22 04:34:12,614 | INFO     | model: linear, x: [1740153785.0, 1740153845.0, 1740153906.0, 1740153967.0, 1740154029.0, 1740154090.0, 1740154150.0, 1740154211.0, 1740154273.0, 1740154333.0, 1740
[2025-02-21 23:34:29] 2025-02-22 04:34:12,614 | INFO     | sum of square deviations: 125141896332.36017
[2025-02-21 23:34:29] 2025-02-22 04:34:12,631 | INFO     | sum of deviations: 567067157282.7781
[2025-02-21 23:34:29] 2025-02-22 04:34:12,631 | INFO     | mean x: 1740176293.2002707
[2025-02-21 23:34:29] 2025-02-22 04:34:12,632 | INFO     | mean y: 2625576.109607578
[2025-02-21 23:34:29] 2025-02-22 04:34:12,632 | INFO     | -- intersect: -7882797712.787653
[2025-02-21 23:34:29] 2025-02-22 04:34:12,632 | INFO     | intersect: -7882797712.787653
[2025-02-21 23:34:29] 2025-02-22 04:34:12,633 | INFO     | chi2: 2.478715622474188
[2025-02-21 23:34:29] 2025-02-22 04:34:12,633 | INFO     | current chi2=2.478715622474188 (change=33.89471317199748 %)
[2025-02-21 23:34:29] 2025-02-22 04:34:12,634 | INFO     | model: linear, x: [1740154090.0, 1740154150.0, 1740154211.0, 1740154273.0, 1740154333.0, 1740154394.0, 1740154455.0, 1740154516.0, 1740154577.0, 1740154638.0, 1740
[2025-02-21 23:34:29] 2025-02-22 04:34:12,635 | INFO     | sum of square deviations: 122618945206.45905
[2025-02-21 23:34:29] 2025-02-22 04:34:12,649 | INFO     | sum of deviations: 445749335325.5216
[2025-02-21 23:34:29] 2025-02-22 04:34:12,650 | INFO     | mean x: 1740176445.69891
[2025-02-21 23:34:29] 2025-02-22 04:34:12,650 | INFO     | mean y: 2632902.5272479565
[2025-02-21 23:34:29] 2025-02-22 04:34:12,650 | INFO     | -- intersect: -6323326701.132416
[2025-02-21 23:34:29] 2025-02-22 04:34:12,650 | INFO     | intersect: -6323326701.132416
[2025-02-21 23:34:29] 2025-02-22 04:34:12,651 | INFO     | chi2: 1.6543494638412093
[2025-02-21 23:34:29] 2025-02-22 04:34:12,652 | INFO     | current chi2=1.6543494638412093 (change=33.25779493050995 %)
[2025-02-21 23:34:29] 2025-02-22 04:34:12,652 | INFO     | model: linear, x: [1740154394.0, 1740154455.0, 1740154516.0, 1740154577.0, 1740154638.0, 1740154699.0, 1740154760.0, 1740154821.0, 1740154882.0, 1740154944.0, 1740
[2025-02-21 23:34:29] 2025-02-22 04:34:12,653 | INFO     | sum of square deviations: 120130134377.55571
[2025-02-21 23:34:29] 2025-02-22 04:34:12,669 | INFO     | sum of deviations: 382361514902.7038
[2025-02-21 23:34:29] 2025-02-22 04:34:12,669 | INFO     | mean x: 1740176598.1975307
[2025-02-21 23:34:29] 2025-02-22 04:34:12,669 | INFO     | mean y: 2636784.390946502
[2025-02-21 23:34:29] 2025-02-22 04:34:12,670 | INFO     | -- intersect: -5536161317.622631
[2025-02-21 23:34:29] 2025-02-22 04:34:12,670 | INFO     | intersect: -5536161317.622631
[2025-02-21 23:34:29] 2025-02-22 04:34:12,671 | INFO     | chi2: 1.4623164876088273
[2025-02-21 23:34:29] 2025-02-22 04:34:12,671 | INFO     | current chi2=1.4623164876088273 (change=11.607763681713507 %)
[2025-02-21 23:34:29] 2025-02-22 04:34:12,671 | INFO     | left removable region: 70
[2025-02-21 23:34:29] 2025-02-22 04:34:12,672 | INFO     | model: linear, x: [1740156530.0, 1740156590.0, 1740156651.0, 1740156712.0, 1740156774.0, 1740156834.0, 1740156896.0, 1740156956.0, 1740157018.0, 1740157078.0, 1740
[2025-02-21 23:34:29] 2025-02-22 04:34:12,673 | INFO     | sum of square deviations: 100979848081.8125
[2025-02-21 23:34:29] 2025-02-22 04:34:12,687 | INFO     | sum of deviations: 165565132888.81247
[2025-02-21 23:34:29] 2025-02-22 04:34:12,688 | INFO     | mean x: 1740177482.6875
[2025-02-21 23:34:29] 2025-02-22 04:34:12,688 | INFO     | mean y: 2656851.664244186
[2025-02-21 23:34:29] 2025-02-22 04:34:12,688 | INFO     | -- intersect: -2850513574.3582835
[2025-02-21 23:34:29] 2025-02-22 04:34:12,688 | INFO     | intersect: -2850513574.3582835
[2025-02-21 23:34:29] 2025-02-22 04:34:12,689 | INFO     | chi2: 0.006093250145413779
[2025-02-21 23:34:29] 2025-02-22 04:34:12,690 | INFO     | -- intersect: -2850513574.3582835
[2025-02-21 23:34:29] 2025-02-22 04:34:12,690 | INFO     | current memory leak: 1.64 B/s (using 688 data points, chi2=0.01)
[2025-02-21 23:34:29] 2025-02-22 04:34:12,691 | INFO     | ..............................
[2025-02-21 23:34:29] 2025-02-22 04:34:12,691 | INFO     | . Timing measurements:
[2025-02-21 23:34:29] 2025-02-22 04:34:12,692 | INFO     | . get job = 0 s
[2025-02-21 23:34:29] 2025-02-22 04:34:12,692 | INFO     | . initial setup = 13 s
[2025-02-21 23:34:29] 2025-02-22 04:34:12,692 | INFO     | . payload setup = 151 s
[2025-02-21 23:34:29] 2025-02-22 04:34:12,692 | INFO     | . stage-in = 1 s
[2025-02-21 23:34:29] 2025-02-22 04:34:12,692 | INFO     | . payload execution = 46677 s
[2025-02-21 23:34:29] 2025-02-22 04:34:12,692 | INFO     | . stage-out = 4 s
[2025-02-21 23:34:29] 2025-02-22 04:34:12,692 | INFO     | . log creation = 1 s
[2025-02-21 23:34:29] 2025-02-22 04:34:12,693 | INFO     | ..............................
[2025-02-21 23:34:29] 2025-02-22 04:34:12,942 | INFO     | 
[2025-02-21 23:34:29] 2025-02-22 04:34:12,942 | INFO     | job summary report
[2025-02-21 23:34:29] 2025-02-22 04:34:12,943 | INFO     | --------------------------------------------------
[2025-02-21 23:34:29] 2025-02-22 04:34:12,943 | INFO     | PanDA job id: 6522147341
[2025-02-21 23:34:29] 2025-02-22 04:34:12,943 | INFO     | task id: 43205075
[2025-02-21 23:34:29] 2025-02-22 04:34:12,943 | INFO     | errors: (none)
[2025-02-21 23:34:29] 2025-02-22 04:34:12,943 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-21 23:34:29] 2025-02-22 04:34:12,943 | INFO     | pilot state: finished 
[2025-02-21 23:34:29] 2025-02-22 04:34:12,944 | INFO     | transexitcode: 0
[2025-02-21 23:34:29] 2025-02-22 04:34:12,944 | INFO     | exeerrorcode: 0
[2025-02-21 23:34:29] 2025-02-22 04:34:12,944 | INFO     | exeerrordiag: 
[2025-02-21 23:34:29] 2025-02-22 04:34:12,965 | INFO     | exitcode: 0
[2025-02-21 23:34:29] 2025-02-22 04:34:12,965 | INFO     | exitmsg: OK
[2025-02-21 23:34:29] 2025-02-22 04:34:12,966 | INFO     | cpuconsumptiontime: 182321 s
[2025-02-21 23:34:29] 2025-02-22 04:34:12,966 | INFO     | nevents: 400
[2025-02-21 23:34:29] 2025-02-22 04:34:12,966 | INFO     | neventsw: 0
[2025-02-21 23:34:29] 2025-02-22 04:34:12,966 | INFO     | pid: 34150
[2025-02-21 23:34:29] 2025-02-22 04:34:12,966 | INFO     | pgrp: 34150
[2025-02-21 23:34:29] 2025-02-22 04:34:12,966 | INFO     | corecount: 10
[2025-02-21 23:34:29] 2025-02-22 04:34:12,967 | INFO     | event service: False
[2025-02-21 23:34:29] 2025-02-22 04:34:12,967 | INFO     | sizes: {0: 2382491, 1: 2383176, 3: 2383375, 4: 2383375, 5: 2383403, 17: 2383459, 28: 2383615, 40: 2383643, 51: 2383671, 62: 2383699, 73: 2383727, 84: 2384035, 95: 
[2025-02-21 23:34:29] 2025-02-22 04:34:12,990 | INFO     | --------------------------------------------------
[2025-02-21 23:34:29] 2025-02-22 04:34:12,990 | INFO     | 
[2025-02-21 23:34:29] 2025-02-22 04:34:12,991 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-21 23:34:29] 2025-02-22 04:34:13,152 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-21 23:34:29] 2025-02-22 04:34:13,153 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-21 23:34:29] 2025-02-22 04:34:13,153 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-21 23:34:29] 2025-02-22 04:34:13,153 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-21 23:34:29] 2025-02-22 04:34:13,153 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-21 23:34:29] 2025-02-22 04:34:13,154 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-21 23:34:29] 2025-02-22 04:34:13,154 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-21 23:34:29] 2025-02-22 04:34:13,154 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-21 23:34:29] 2025-02-22 04:34:13,154 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-21 23:34:29] 2025-02-22 04:34:13,154 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-21 23:34:29] 2025-02-22 04:34:13,154 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-21 23:34:29] 2025-02-22 04:34:13,154 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-21 23:34:29] 2025-02-22 04:34:13,155 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-21 23:34:29] 2025-02-22 04:34:13,155 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-21 23:34:29] 2025-02-22 04:34:13,175 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-21 23:34:29] 2025-02-22 04:34:13,175 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-21 23:34:29] 2025-02-22 04:34:13,176 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-21 23:34:29] 2025-02-22 04:34:13,176 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-21 23:34:29] 2025-02-22 04:34:13,176 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-21 23:34:29] 2025-02-22 04:34:13,176 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-21 23:34:29] 2025-02-22 04:34:13,176 | INFO     | job 6522147341 has completed (purged errors)
[2025-02-21 23:34:29] 2025-02-22 04:34:13,177 | INFO     | overall cleanup function is called
[2025-02-21 23:34:29] 2025-02-22 04:34:14,187 | INFO     | --- collectZombieJob: --- 10, [34150]
[2025-02-21 23:34:29] 2025-02-22 04:34:14,187 | INFO     | zombie collector waiting for pid 34150
[2025-02-21 23:34:29] 2025-02-22 04:34:14,187 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-21 23:34:29] 2025-02-22 04:34:14,188 | INFO     | collected zombie processes
[2025-02-21 23:34:29] 2025-02-22 04:34:14,188 | INFO     | will attempt to kill all subprocesses of pid=34150
[2025-02-21 23:34:29] 2025-02-22 04:34:14,832 | INFO     | process IDs to be killed: [34150] (in reverse order)
[2025-02-21 23:34:29] 2025-02-22 04:34:15,172 | WARNING  | found no corresponding commands to process id(s)
[2025-02-21 23:34:29] 2025-02-22 04:34:15,172 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-21 23:34:29] 2025-02-22 04:34:15,223 | INFO     | did not find any defunct processes belonging to 34150
[2025-02-21 23:34:29] 2025-02-22 04:34:15,256 | INFO     | did not find any defunct processes belonging to 34150
[2025-02-21 23:34:29] 2025-02-22 04:34:15,257 | INFO     | ready for new job
[2025-02-21 23:34:29] 2025-02-22 04:34:15,257 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-21 23:34:29] 2025-02-22 04:34:15,274 | INFO     | **************************************
[2025-02-21 23:34:29] 2025-02-22 04:34:15,275 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-21 23:34:29] 2025-02-22 04:34:15,275 | INFO     | **************************************
[2025-02-21 23:34:29] 2025-02-22 04:34:15,275 | INFO     | 
[2025-02-21 23:34:29] 2025-02-22 04:34:15,277 | INFO     | architecture information:
[2025-02-21 23:34:29] 2025-02-22 04:34:15,285 | INFO     | executing command: cat /etc/os-release
[2025-02-21 23:34:29] 2025-02-22 04:34:15,324 | INFO     | cat /etc/os-release:
[2025-02-21 23:34:29] NAME="CentOS Linux"
[2025-02-21 23:34:29] VERSION="7 (Core)"
[2025-02-21 23:34:29] ID="centos"
[2025-02-21 23:34:29] ID_LIKE="rhel fedora"
[2025-02-21 23:34:29] VERSION_ID="7"
[2025-02-21 23:34:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-21 23:34:29] ANSI_COLOR="0;31"
[2025-02-21 23:34:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-21 23:34:29] HOME_URL="https://www.centos.org/"
[2025-02-21 23:34:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-21 23:34:29] 
[2025-02-21 23:34:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-21 23:34:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-21 23:34:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-21 23:34:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-21 23:34:29] 
[2025-02-21 23:34:29] 2025-02-22 04:34:15,325 | INFO     | **************************************
[2025-02-21 23:34:29] 2025-02-22 04:34:15,451 | INFO     | PID=1800 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-02-21 23:34:29] 2025-02-22 04:34:15,477 | INFO     | .. there are 20 such processes running
[2025-02-21 23:34:29] 2025-02-22 04:34:15,828 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-21 23:34:29] 2025-02-22 04:34:15,991 | INFO     | sufficient remaining disk space (105722675200 B)
[2025-02-21 23:34:29] 2025-02-22 04:34:15,992 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-21 23:34:29] 2025-02-22 04:34:15,992 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-21 23:34:29] 2025-02-22 04:34:15,992 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-21 23:34:29] 2025-02-22 04:34:15,993 | INFO     | found 0 job(s) in 20 queues
[2025-02-21 23:34:29] 2025-02-22 04:34:15,993 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-21 23:34:29] 2025-02-22 04:34:15,993 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-21 23:34:29] 2025-02-22 04:34:16,126 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-21 23:34:29] 2025-02-22 04:34:16,321 | INFO     | all payload control threads have been joined
[2025-02-21 23:34:29] 2025-02-22 04:34:16,737 | INFO     | all data control threads have been joined
[2025-02-21 23:34:29] 2025-02-22 04:34:16,825 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-21 23:34:29] 2025-02-22 04:34:16,825 | INFO     | aborting loop
[2025-02-21 23:34:29] 2025-02-22 04:34:16,929 | INFO     | all job control threads have been joined
[2025-02-21 23:34:29] 2025-02-22 04:34:16,998 | INFO     | [job] retrieve thread has finished
[2025-02-21 23:34:29] 2025-02-22 04:34:17,028 | INFO     | [payload] execute_payloads thread has finished
[2025-02-21 23:34:29] 2025-02-22 04:34:17,043 | INFO     | [job] validate thread has finished
[2025-02-21 23:34:29] 2025-02-22 04:34:17,327 | INFO     | [payload] control thread has finished
[2025-02-21 23:34:29] 2025-02-22 04:34:17,354 | INFO     | [data] copytool_in thread has finished
[2025-02-21 23:34:29] 2025-02-22 04:34:17,431 | INFO     | [payload] validate_pre thread has finished
[2025-02-21 23:34:29] 2025-02-22 04:34:17,432 | INFO     | [job] create_data_payload thread has finished
[2025-02-21 23:34:29] 2025-02-22 04:34:17,745 | INFO     | [data] control thread has finished
[2025-02-21 23:34:29] 2025-02-22 04:34:17,769 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-21 23:34:29] 2025-02-22 04:34:17,830 | INFO     | [job] job monitor thread has finished
[2025-02-21 23:34:29] 2025-02-22 04:34:17,935 | INFO     | [job] control thread has finished
[2025-02-21 23:34:29] 2025-02-22 04:34:17,942 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-21 23:34:29] 2025-02-22 04:34:18,032 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-21 23:34:29] 2025-02-22 04:34:18,133 | INFO     | [data] copytool_out thread has finished
[2025-02-21 23:34:29] 2025-02-22 04:34:18,189 | INFO     | [payload] validate_post thread has finished
[2025-02-21 23:34:29] 2025-02-22 04:34:18,497 | INFO     | [payload] failed_post thread has finished
[2025-02-21 23:34:29] 2025-02-22 04:34:18,948 | INFO     | [job] queue monitor thread has finished
[2025-02-21 23:34:29] 2025-02-22 04:34:21,786 | INFO     | [data] queue_monitor thread has finished
[2025-02-21 23:34:29] 2025-02-22 04:34:23,309 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139919577618240)>', '<ExcThread(monitor, started 139919137687296)>']
[2025-02-21 23:34:29] 2025-02-22 04:34:24,040 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-21 23:34:29] 2025-02-22 04:34:24,040 | INFO     | [monitor] control thread has ended
[2025-02-21 23:34:29] 2025-02-22 04:34:28,335 | INFO     | all workflow threads have been joined
[2025-02-21 23:34:29] 2025-02-22 04:34:28,335 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-21 23:34:29] 2025-02-22 04:34:28,336 | INFO     | traces error code: 0
[2025-02-21 23:34:29] 2025-02-22 04:34:28,336 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-21 23:34:29] 2025-02-22 04:34:28,876 [wrapper] ==== pilot stdout END ====
[2025-02-21 23:34:29] 2025-02-22 04:34:28,896 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-21 23:34:29] 2025-02-22 04:34:28,932 [wrapper] pilotpid: 1800
[2025-02-21 23:34:29] 2025-02-22 04:34:28,954 [wrapper] Pilot exit status: 0
[2025-02-21 23:34:29] 2025-02-22 04:34:29,102 [wrapper] pandaids: 6522147341
[2025-02-21 23:34:29] 2025-02-22 04:34:29,231 [wrapper] cleanup supervisor_pilot 28922 1801
[2025-02-21 23:34:29] 2025-02-22 04:34:29,235 [wrapper] Test setup, not cleaning
[2025-02-21 23:34:29] 2025-02-22 04:34:29,265 [wrapper] apfmon messages muted
[2025-02-21 23:34:29] 2025-02-22 04:34:29,281 [wrapper] ==== wrapper stdout END ====
[2025-02-21 23:34:29] 2025-02-22 04:34:29,320 [wrapper] ==== wrapper stderr END ====
[2025-02-21 23:34:29]  *** Error codes and diagnostics ***
[2025-02-21 23:34:29]     "exeErrorCode": 0,
[2025-02-21 23:34:29]     "exeErrorDiag": "",
[2025-02-21 23:34:29]     "pilotErrorCode": 0,
[2025-02-21 23:34:29]     "pilotErrorDiag": "",
[2025-02-21 23:34:29]  *** Listing of results directory ***
[2025-02-21 23:34:29] total 670756
[2025-02-21 23:34:29] -rw-r--r-- 1 boincer umatlas    491065 Feb 21 06:35 pilot3.tar.gz
[2025-02-21 23:34:29] -rwx------ 1 boincer umatlas     35865 Feb 21 06:54 runpilot2-wrapper.sh
[2025-02-21 23:34:29] -rw-r--r-- 1 boincer umatlas      5118 Feb 21 06:54 queuedata.json
[2025-02-21 23:34:29] -rw-r--r-- 1 boincer umatlas       100 Feb 21 10:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-21 23:34:29] -rwxr-xr-x 1 boincer umatlas      7986 Feb 21 10:25 run_atlas
[2025-02-21 23:34:29] -rw-r--r-- 1 boincer umatlas       105 Feb 21 10:25 job.xml
[2025-02-21 23:34:29] -rw-r--r-- 2 boincer umatlas 342011707 Feb 21 10:25 EVNT.43092757._001140.pool.root.1
[2025-02-21 23:34:29] -rw-r--r-- 2 boincer umatlas     17569 Feb 21 10:25 start_atlas.sh
[2025-02-21 23:34:29] drwxrwx--x 2 boincer umatlas      4096 Feb 21 10:25 shared
[2025-02-21 23:34:29] -rw-r--r-- 2 boincer umatlas    503556 Feb 21 10:25 input.tar.gz
[2025-02-21 23:34:29] -rw-r--r-- 1 boincer umatlas         0 Feb 21 10:25 boinc_lockfile
[2025-02-21 23:34:29] -rw-r--r-- 1 boincer umatlas      2556 Feb 21 10:26 pandaJob.out
[2025-02-21 23:34:29] -rw------- 1 boincer umatlas       467 Feb 21 10:27 setup.sh.local
[2025-02-21 23:34:29] -rw------- 1 boincer umatlas    991421 Feb 21 10:29 agis_schedconf.cvmfs.json
[2025-02-21 23:34:29] drwx------ 4 boincer umatlas      4096 Feb 21 10:29 pilot3
[2025-02-21 23:34:29] -rw-r--r-- 1 boincer umatlas      6037 Feb 21 23:29 init_data.xml
[2025-02-21 23:34:29] -rw------- 1 boincer umatlas 327126406 Feb 21 23:32 HITS.43205075._057265.pool.root.1
[2025-02-21 23:34:29] -rw-r--r-- 1 boincer umatlas       533 Feb 21 23:32 boinc_task_state.xml
[2025-02-21 23:34:29] -rw------- 1 boincer umatlas        95 Feb 21 23:33 pilot_heartbeat.json
[2025-02-21 23:34:29] -rw------- 1 boincer umatlas      1057 Feb 21 23:33 memory_monitor_summary.json
[2025-02-21 23:34:29] -rw------- 1 boincer umatlas   1582569 Feb 21 23:33 agis_ddmendpoints.agis.ALL.json
[2025-02-21 23:34:29] -rw------- 1 boincer umatlas    831774 Feb 21 23:33 log.43205075._057265.job.log.tgz.1
[2025-02-21 23:34:29] -rw------- 1 boincer umatlas      7774 Feb 21 23:34 heartbeat.json
[2025-02-21 23:34:29] -rw-r--r-- 1 boincer umatlas      8192 Feb 21 23:34 boinc_mmap_file
[2025-02-21 23:34:29] -rw------- 1 boincer umatlas      4731 Feb 21 23:34 pilotlog.txt
[2025-02-21 23:34:29] -rw-r--r-- 1 boincer umatlas        29 Feb 21 23:34 wrapper_checkpoint.txt
[2025-02-21 23:34:29] -rw------- 1 boincer umatlas   6122647 Feb 21 23:34 log.43205075._057265.job.log.1
[2025-02-21 23:34:29] -rw------- 1 boincer umatlas       357 Feb 21 23:34 output.list
[2025-02-21 23:34:29] -rw-r--r-- 1 boincer umatlas       620 Feb 21 23:34 runtime_log
[2025-02-21 23:34:29] -rw------- 1 boincer umatlas   6973440 Feb 21 23:34 result.tar.gz
[2025-02-21 23:34:29] -rw-r--r-- 1 boincer umatlas     11416 Feb 21 23:34 runtime_log.err
[2025-02-21 23:34:29] -rw------- 1 boincer umatlas       665 Feb 21 23:34 exlMDmumg56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmwKdKDmiJD2Xm.diag
[2025-02-21 23:34:29] -rw-r--r-- 1 boincer umatlas     21844 Feb 21 23:34 stderr.txt
[2025-02-21 23:34:29] HITS file was successfully produced:
[2025-02-21 23:34:29] -rw------- 1 boincer umatlas 327126406 Feb 21 23:32 shared/HITS.pool.root.1
[2025-02-21 23:34:29]  *** Contents of shared directory: ***
[2025-02-21 23:34:29] total 660784
[2025-02-21 23:34:29] -rw-r--r-- 2 boincer umatlas 342011707 Feb 21 10:25 ATLAS.root_0
[2025-02-21 23:34:29] -rw-r--r-- 2 boincer umatlas     17569 Feb 21 10:25 start_atlas.sh
[2025-02-21 23:34:29] -rw-r--r-- 2 boincer umatlas    503556 Feb 21 10:25 input.tar.gz
[2025-02-21 23:34:29] -rw------- 1 boincer umatlas 327126406 Feb 21 23:32 HITS.pool.root.1
[2025-02-21 23:34:29] -rw------- 1 boincer umatlas   6973440 Feb 21 23:34 result.tar.gz
23:34:30 (11282): run_atlas exited; CPU time 182042.629547
23:34:30 (11282): called boinc_finish(0)

</stderr_txt>
]]>

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