Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-21 23:36:54 (16808): Detected: vboxwrapper 26206
2025-02-21 23:36:54 (16808): Detected: BOINC client v7.20.2
2025-02-21 23:36:55 (16808): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-21 23:36:55 (16808): Successfully copied 'init_data.xml' to the shared directory.
2025-02-21 23:36:55 (16808): Create VM. (boinc_3ef86d892b5519cc, slot#0)
2025-02-21 23:36:56 (16808): Setting Memory Size for VM. (5900MB)
2025-02-21 23:36:56 (16808): Setting CPU Count for VM. (3)
2025-02-21 23:36:56 (16808): Setting Chipset Options for VM.
2025-02-21 23:36:57 (16808): Setting Graphics Controller Options for VM.
2025-02-21 23:36:57 (16808): Setting Boot Options for VM.
2025-02-21 23:36:57 (16808): Setting Network Configuration for NAT.
2025-02-21 23:36:58 (16808): Enabling VM Network Access.
2025-02-21 23:36:58 (16808): Disabling USB Support for VM.
2025-02-21 23:36:58 (16808): Disabling COM Port Support for VM.
2025-02-21 23:36:58 (16808): Disabling LPT Port Support for VM.
2025-02-21 23:36:59 (16808): Disabling Audio Support for VM.
2025-02-21 23:36:59 (16808): Disabling Clipboard Support for VM.
2025-02-21 23:36:59 (16808): Disabling Drag and Drop Support for VM.
2025-02-21 23:36:59 (16808): Adding storage controller(s) to VM.
2025-02-21 23:37:00 (16808): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-21 23:37:00 (16808): Adding VirtualBox Guest Additions to VM.
2025-02-21 23:37:00 (16808): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-21 23:37:01 (16808): forwarding host port 54796 to guest port 80
2025-02-21 23:37:01 (16808): Enabling remote desktop for VM.
2025-02-21 23:37:01 (16808): Enabling shared directory for VM.
2025-02-21 23:37:02 (16808): Starting VM using VBoxManage interface. (boinc_3ef86d892b5519cc, slot#0)
2025-02-21 23:37:08 (16808): Successfully started VM. (PID = '6940')
2025-02-21 23:37:08 (16808): Reporting VM Process ID to BOINC.
2025-02-21 23:37:08 (16808): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-21 23:37:08 (16808): Guest Log: CPUID EDX: 0x178bfbff
2025-02-21 23:37:08 (16808): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-21 23:37:08 (16808): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-21 23:37:08 (16808): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-21 23:37:08 (16808): Detected: Web Application Enabled (http://localhost:54796)
2025-02-21 23:37:08 (16808): Detected: Remote Desktop Enabled (localhost:54797)
2025-02-21 23:37:08 (16808): Preference change detected
2025-02-21 23:37:08 (16808): Setting CPU throttle for VM. (100%)
2025-02-21 23:37:08 (16808): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-21 23:37:10 (16808): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-21 23:37:10 (16808): Guest Log: BIOS: Booting from Hard Disk...
2025-02-21 23:37:12 (16808): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-21 23:37:12 (16808): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-21 23:37:12 (16808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-21 23:37:18 (16808): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-21 23:37:18 (16808): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-21 23:37:23 (16808): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-21 23:37:23 (16808): Guest Log: 00:00:00.000147 main     Log opened 2025-02-21T23:37:21.042059000Z
2025-02-21 23:37:23 (16808): Guest Log: 00:00:00.000225 main     OS Product: Linux
2025-02-21 23:37:23 (16808): Guest Log: 00:00:00.000248 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-21 23:37:23 (16808): Guest Log: 00:00:00.000265 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-21 23:37:23 (16808): Guest Log: 00:00:00.000281 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-21 23:37:23 (16808): Guest Log: 00:00:00.000281 main     Process ID: 1336
2025-02-21 23:37:23 (16808): Guest Log: 00:00:00.000282 main     Package type: LINUX_64BITS_GENERIC
2025-02-21 23:37:23 (16808): Guest Log: 00:00:00.000862 main     5.2.32 r132073 started. Verbose level = 0
2025-02-21 23:37:23 (16808): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-21 23:37:23 (16808): Guest Log: [INFO] Mounting shared directory
2025-02-21 23:37:23 (16808): Guest Log: [INFO] Checking for init_data.xml
2025-02-21 23:37:25 (16808): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-21 23:37:25 (16808): Guest Log: [INFO] Detected branch: prod
2025-02-21 23:37:25 (16808): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-21 23:37:25 (16808): Guest Log: Copying input files
2025-02-21 23:37:27 (16808): Guest Log: Copied input files into RunAtlas.
2025-02-21 23:37:27 (16808): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-02-21 23:37:33 (16808): Guest Log: 00:00:10.002428 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 690 364 000ns (GuestNow=1 740 177 452 353 467 000 ns GuestLast=1 740 181 041 043 831 000 ns fSetTimeLastLoop=true )
2025-02-21 23:37:35 (16808): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-21 23:37:35 (16808): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-21 23:37:35 (16808): Guest Log: 2.6.3.0 1610 0 31612 142918 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-02-21 23:37:35 (16808): Guest Log: copied the webapp to /var/www
2025-02-21 23:37:35 (16808): Guest Log: ATHENA_PROC_NUMBER=3
2025-02-21 23:37:35 (16808): Guest Log: ATHENA_CORE_NUMBER=3
2025-02-21 23:37:35 (16808): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-21 23:37:35 (16808): Guest Log:  *** Starting ATLAS job. (PandaID=6522040028 taskID=43205075) ***
2025-02-22 01:17:11 (16808): Status Report: Elapsed Time: '6000.000000'
2025-02-22 01:17:11 (16808): Status Report: CPU Time: '16211.937500'
2025-02-22 02:57:14 (16808): Status Report: Elapsed Time: '12000.000000'
2025-02-22 02:57:14 (16808): Status Report: CPU Time: '34122.937500'
2025-02-22 04:37:21 (16808): Status Report: Elapsed Time: '18000.000000'
2025-02-22 04:37:21 (16808): Status Report: CPU Time: '52053.765625'
2025-02-22 06:17:24 (16808): Status Report: Elapsed Time: '24000.000000'
2025-02-22 06:17:24 (16808): Status Report: CPU Time: '69972.109375'
2025-02-22 07:57:27 (16808): Status Report: Elapsed Time: '30000.000000'
2025-02-22 07:57:27 (16808): Status Report: CPU Time: '87532.062500'
2025-02-22 07:58:28 (16808): Guest Log:  *** Job finished ***
2025-02-22 07:58:28 (16808): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-22 07:58:28 (16808): Guest Log: 2025-02-22 06:57:58,984 | INFO     | [data] queue_monitor thread has finished
2025-02-22 07:58:28 (16808): Guest Log: 2025-02-22 06:58:03,228 | INFO     | job.realtimelogging is not enabled
2025-02-22 07:58:28 (16808): Guest Log: 2025-02-22 06:58:04,230 | INFO     | [payload] run_realtimelog thread has finished
2025-02-22 07:58:28 (16808): Guest Log: 2025-02-22 06:58:05,460 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139819288303424)>', '<ExcThread(monitor, started 139818491176704)>']
2025-02-22 07:58:28 (16808): Guest Log: 2025-02-22 06:58:05,705 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-22 07:58:28 (16808): Guest Log: 2025-02-22 06:58:05,705 | INFO     | [monitor] control thread has ended
2025-02-22 07:58:28 (16808): Guest Log: 2025-02-22 06:58:15,235 | INFO     | all workflow threads have been joined
2025-02-22 07:58:28 (16808): Guest Log: 2025-02-22 06:58:15,235 | INFO     | end of generic workflow (traces error code: 0)
2025-02-22 07:58:28 (16808): Guest Log: 2025-02-22 06:58:15,235 | INFO     | traces error code: 0
2025-02-22 07:58:28 (16808): Guest Log: 2025-02-22 06:58:15,235 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-22 07:58:28 (16808): Guest Log: 2025-02-22 06:58:15,332 [wrapper] ==== pilot stdout END ====
2025-02-22 07:58:28 (16808): Guest Log: 2025-02-22 06:58:15,336 [wrapper] ==== wrapper stdout RESUME ====
2025-02-22 07:58:28 (16808): Guest Log: 2025-02-22 06:58:15,339 [wrapper] pilotpid: 5922
2025-02-22 07:58:28 (16808): Guest Log: 2025-02-22 06:58:15,342 [wrapper] Pilot exit status: 0
2025-02-22 07:58:28 (16808): Guest Log: 2025-02-22 06:58:15,451 [wrapper] pandaids: 6522040028
2025-02-22 07:58:28 (16808): Guest Log: 2025-02-22 06:58:15,478 [wrapper] cleanup supervisor_pilot 11195 5923
2025-02-22 07:58:28 (16808): Guest Log: 2025-02-22 06:58:15,482 [wrapper] Test setup, not cleaning
2025-02-22 07:58:28 (16808): Guest Log: 2025-02-22 06:58:15,488 [wrapper] apfmon messages muted
2025-02-22 07:58:28 (16808): Guest Log: 2025-02-22 06:58:15,492 [wrapper] ==== wrapper stdout END ====
2025-02-22 07:58:28 (16808): Guest Log: 2025-02-22 06:58:15,495 [wrapper] ==== wrapper stderr END ====
2025-02-22 07:58:28 (16808): Guest Log:  *** Error codes and diagnostics ***
2025-02-22 07:58:28 (16808): Guest Log:     "exeErrorCode": 0,
2025-02-22 07:58:28 (16808): Guest Log:     "exeErrorDiag": "",
2025-02-22 07:58:28 (16808): Guest Log:     "pilotErrorCode": 0,
2025-02-22 07:58:28 (16808): Guest Log:     "pilotErrorDiag": "",
2025-02-22 07:58:28 (16808): Guest Log:  *** Listing of results directory ***
2025-02-22 07:58:28 (16808): Guest Log: total 338520
2025-02-22 07:58:28 (16808): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 21 10:15 pilot3.tar.gz
2025-02-22 07:58:28 (16808): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 21 10:47 queuedata.json
2025-02-22 07:58:28 (16808): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 21 10:48 runpilot2-wrapper.sh
2025-02-22 07:58:28 (16808): Guest Log: -rwxr-xr-x. 1 atlas atlas      8882 Feb 21 22:37 init_data.xml
2025-02-22 07:58:28 (16808): Guest Log: -rwxr-xr-x. 1 atlas atlas    503559 Feb 21 22:37 input.tar.gz
2025-02-22 07:58:28 (16808): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 21 22:37 start_atlas.sh
2025-02-22 07:58:28 (16808): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 21 22:37 EVNT.43092757._000788.pool.root.1 -> /data/./ATLAS.root_0
2025-02-22 07:58:28 (16808): Guest Log: -rw-r--r--. 1 atlas atlas      2554 Feb 21 22:37 pandaJob.out
2025-02-22 07:58:28 (16808): Guest Log: -rw-------. 1 atlas atlas       459 Feb 21 22:37 setup.sh.local
2025-02-22 07:58:28 (16808): Guest Log: -rw-------. 1 atlas atlas    987673 Feb 21 22:38 agis_schedconf.cvmfs.json
2025-02-22 07:58:28 (16808): Guest Log: drwx------. 4 atlas atlas      4096 Feb 21 22:38 pilot3
2025-02-22 07:58:28 (16808): Guest Log: -rw-------. 1 atlas atlas        95 Feb 22 06:57 pilot_heartbeat.json
2025-02-22 07:58:28 (16808): Guest Log: -rw-------. 1 atlas atlas 335243505 Feb 22 06:57 HITS.43205075._057061.pool.root.1
2025-02-22 07:58:28 (16808): Guest Log: -rw-------. 1 atlas atlas      1029 Feb 22 06:57 memory_monitor_summary.json
2025-02-22 07:58:28 (16808): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 22 06:57 agis_ddmendpoints.agis.ALL.json
2025-02-22 07:58:28 (16808): Guest Log: -rw-------. 1 atlas atlas    495010 Feb 22 06:57 log.43205075._057061.job.log.tgz.1
2025-02-22 07:58:28 (16808): Guest Log: -rw-------. 1 atlas atlas      7732 Feb 22 06:57 heartbeat.json
2025-02-22 07:58:28 (16808): Guest Log: -rw-------. 1 atlas atlas      4656 Feb 22 06:58 pilotlog.txt
2025-02-22 07:58:28 (16808): Guest Log: -rw-------. 1 atlas atlas   3336942 Feb 22 06:58 log.43205075._057061.job.log.1
2025-02-22 07:58:28 (16808): Guest Log: -rw-------. 1 atlas atlas       357 Feb 22 06:58 output.list
2025-02-22 07:58:28 (16808): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 22 06:58 runtime_log
2025-02-22 07:58:28 (16808): Guest Log: -rw-------. 1 atlas atlas   3850240 Feb 22 06:58 result.tar.gz
2025-02-22 07:58:28 (16808): Guest Log: -rw-------. 1 atlas atlas       659 Feb 22 06:58 UXuKDmskf56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmGFdKDmebvz7n.diag
2025-02-22 07:58:28 (16808): Guest Log: -rw-r--r--. 1 atlas atlas     11299 Feb 22 06:58 runtime_log.err
2025-02-22 07:58:28 (16808): Guest Log: Looking for outputfile HITS.43205075._057061.pool.root.1
2025-02-22 07:58:28 (16808): Guest Log: HITS file was successfully produced
2025-02-22 07:58:28 (16808): Guest Log: -rw-------. 1 atlas atlas 335243505 Feb 22 06:57 /home/atlas/RunAtlas/HITS.43205075._057061.pool.root.1
2025-02-22 07:58:29 (16808): Guest Log: Successfully finished the ATLAS job!
2025-02-22 07:58:29 (16808): Guest Log: Copying the results back to the shared directory!
2025-02-22 07:58:29 (16808): Guest Log:  *** Contents of shared directory: ***
2025-02-22 07:58:29 (16808): Guest Log: total 669860
2025-02-22 07:58:29 (16808): Guest Log: -rwxrwxrwx. 1 root root 346301469 Feb 21 22:36 ATLAS.root_0
2025-02-22 07:58:29 (16808): Guest Log: -rwxrwxrwx. 1 root root 335243505 Feb 22  2025 HITS.pool.root.1
2025-02-22 07:58:29 (16808): Guest Log: -rwxrwxrwx. 1 root root      8882 Feb 21 22:36 init_data.xml
2025-02-22 07:58:29 (16808): Guest Log: -rwxrwxrwx. 1 root root    503559 Feb 21 14:31 input.tar.gz
2025-02-22 07:58:29 (16808): Guest Log: -rwxrwxrwx. 1 root root   3850240 Feb 22  2025 result.tar.gz
2025-02-22 07:58:29 (16808): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 21 14:31 start_atlas.sh
2025-02-22 07:58:29 (16808): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-22 07:58:29 (16808): VM Completion File Detected.
2025-02-22 07:58:29 (16808): Powering off VM.
2025-02-22 07:58:30 (16808): Successfully stopped VM.
2025-02-22 07:58:30 (16808): Deregistering VM. (boinc_3ef86d892b5519cc, slot#0)
2025-02-22 07:58:30 (16808): Removing network bandwidth throttle group from VM.
2025-02-22 07:58:31 (16808): Removing VM from VirtualBox.
07:58:36 (16808): called boinc_finish(0)

</stderr_txt>
]]>

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