Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:03:57 (26410): wrapper (7.7.26015): starting
08:03:57 (26410): wrapper: running run_atlas (--nthreads 10)
[2025-02-21 08:03:57] Arguments: --nthreads 10
[2025-02-21 08:03:57] Threads: 10
[2025-02-21 08:03:57] Checking for CVMFS
[2025-02-21 08:03:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-21 08:03:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-21 08:03:59] Running cvmfs_config stat atlas.cern.ch
[2025-02-21 08:04:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-21 08:04:00] 2.11.2.0 38461 135053 177912 142901 0 287 18399317 18432000 8790 130560 0 43423098 99.396 63970753 46667 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-21 08:04:00] CVMFS is ok
[2025-02-21 08:04:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-21 08:04:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-21 08:04:00] Further information can be found at the LHC@home message board.
[2025-02-21 08:04:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-21 08:04:00] Checking for apptainer binary...
[2025-02-21 08:04:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-21 08:04:00] Running /usr/bin/apptainer --version
[2025-02-21 08:04:01] apptainer version 1.3.2-1.el7
[2025-02-21 08:04:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-21 08:04:10] c-211-4.aglt2.org
[2025-02-21 08:04:10] apptainer works
[2025-02-21 08:04:10] Set ATHENA_PROC_NUMBER=10
[2025-02-21 08:04:10] Set ATHENA_CORE_NUMBER=10
[2025-02-21 08:04:10] Starting ATLAS job with PandaID=6522039475
[2025-02-21 08:04:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-21 23:45:01]  *** The last 200 lines of the pilot log: ***
[2025-02-21 23:45:01] 2025-02-22 04:44:43,661 | INFO     | chi2: 12.235474706480701
[2025-02-21 23:45:01] 2025-02-22 04:44:43,662 | INFO     | model: linear, x: [1740143409.0, 1740143470.0, 1740143531.0, 1740143592.0, 1740143653.0, 1740143715.0, 1740143775.0, 1740143836.0, 1740143897.0, 1740143958.0, 1740
[2025-02-21 23:45:01] 2025-02-22 04:44:43,663 | INFO     | sum of square deviations: 236768333496.03067
[2025-02-21 23:45:01] 2025-02-22 04:44:43,686 | INFO     | sum of deviations: 1501327217906.4387
[2025-02-21 23:45:01] 2025-02-22 04:44:43,687 | INFO     | mean x: 1740171256.3741794
[2025-02-21 23:45:01] 2025-02-22 04:44:43,687 | INFO     | mean y: 2627379.4168490153
[2025-02-21 23:45:01] 2025-02-22 04:44:43,687 | INFO     | -- intersect: -11031645795.70265
[2025-02-21 23:45:01] 2025-02-22 04:44:43,687 | INFO     | intersect: -11031645795.70265
[2025-02-21 23:45:01] 2025-02-22 04:44:43,689 | INFO     | chi2: 9.876552817067223
[2025-02-21 23:45:01] 2025-02-22 04:44:43,689 | INFO     | current chi2=9.876552817067223 (change=19.279365500743836 %)
[2025-02-21 23:45:01] 2025-02-22 04:44:43,689 | INFO     | right removable region: 913
[2025-02-21 23:45:01] 2025-02-22 04:44:43,690 | INFO     | model: linear, x: [1740143715.0, 1740143775.0, 1740143836.0, 1740143897.0, 1740143958.0, 1740144019.0, 1740144081.0, 1740144141.0, 1740144204.0, 1740144264.0, 1740
[2025-02-21 23:45:01] 2025-02-22 04:44:43,691 | INFO     | sum of square deviations: 236767901432.2815
[2025-02-21 23:45:01] 2025-02-22 04:44:43,721 | INFO     | sum of deviations: 975012976197.6931
[2025-02-21 23:45:01] 2025-02-22 04:44:43,721 | INFO     | mean x: 1740171561.3752735
[2025-02-21 23:45:01] 2025-02-22 04:44:43,721 | INFO     | mean y: 2632949.7210065643
[2025-02-21 23:45:01] 2025-02-22 04:44:43,721 | INFO     | -- intersect: -7163413811.209406
[2025-02-21 23:45:01] 2025-02-22 04:44:43,721 | INFO     | intersect: -7163413811.209406
[2025-02-21 23:45:01] 2025-02-22 04:44:43,723 | INFO     | chi2: 7.895816342689943
[2025-02-21 23:45:01] 2025-02-22 04:44:43,723 | INFO     | current chi2=7.895816342689943 (change=35.467838133752124 %)
[2025-02-21 23:45:01] 2025-02-22 04:44:43,724 | INFO     | model: linear, x: [1740144019.0, 1740144081.0, 1740144141.0, 1740144204.0, 1740144264.0, 1740144324.0, 1740144385.0, 1740144447.0, 1740144508.0, 1740144568.0, 1740
[2025-02-21 23:45:01] 2025-02-22 04:44:43,725 | INFO     | sum of square deviations: 232903296784.68875
[2025-02-21 23:45:01] 2025-02-22 04:44:43,750 | INFO     | sum of deviations: 739933141463.1536
[2025-02-21 23:45:01] 2025-02-22 04:44:43,750 | INFO     | mean x: 1740171713.8789878
[2025-02-21 23:45:01] 2025-02-22 04:44:43,750 | INFO     | mean y: 2642224.99229923
[2025-02-21 23:45:01] 2025-02-22 04:44:43,750 | INFO     | -- intersect: -5525878584.767436
[2025-02-21 23:45:01] 2025-02-22 04:44:43,750 | INFO     | intersect: -5525878584.767436
[2025-02-21 23:45:01] 2025-02-22 04:44:43,752 | INFO     | chi2: 5.8548400951037545
[2025-02-21 23:45:01] 2025-02-22 04:44:43,752 | INFO     | current chi2=5.8548400951037545 (change=25.848831317812408 %)
[2025-02-21 23:45:01] 2025-02-22 04:44:43,753 | INFO     | model: linear, x: [1740144324.0, 1740144385.0, 1740144447.0, 1740144508.0, 1740144568.0, 1740144629.0, 1740144690.0, 1740144751.0, 1740144812.0, 1740144873.0, 1740
[2025-02-21 23:45:01] 2025-02-22 04:44:43,755 | INFO     | sum of square deviations: 229081137736.85724
[2025-02-21 23:45:01] 2025-02-22 04:44:43,775 | INFO     | sum of deviations: 528587811714.6454
[2025-02-21 23:45:01] 2025-02-22 04:44:43,776 | INFO     | mean x: 1740171866.3794248
[2025-02-21 23:45:01] 2025-02-22 04:44:43,777 | INFO     | mean y: 2650657.4325221237
[2025-02-21 23:45:01] 2025-02-22 04:44:43,777 | INFO     | -- intersect: -4012667443.1502166
[2025-02-21 23:45:01] 2025-02-22 04:44:43,777 | INFO     | intersect: -4012667443.1502166
[2025-02-21 23:45:01] 2025-02-22 04:44:43,778 | INFO     | chi2: 4.231398538882436
[2025-02-21 23:45:01] 2025-02-22 04:44:43,778 | INFO     | current chi2=4.231398538882436 (change=27.728196327325133 %)
[2025-02-21 23:45:01] 2025-02-22 04:44:43,779 | INFO     | model: linear, x: [1740144629.0, 1740144690.0, 1740144751.0, 1740144812.0, 1740144873.0, 1740144935.0, 1740144995.0, 1740145057.0, 1740145119.0, 1740145179.0, 1740
[2025-02-21 23:45:01] 2025-02-22 04:44:43,780 | INFO     | sum of square deviations: 225300915945.50168
[2025-02-21 23:45:01] 2025-02-22 04:44:43,809 | INFO     | sum of deviations: 366999537128.48065
[2025-02-21 23:45:01] 2025-02-22 04:44:43,810 | INFO     | mean x: 1740172018.8820913
[2025-02-21 23:45:01] 2025-02-22 04:44:43,810 | INFO     | mean y: 2657171.296996663
[2025-02-21 23:45:01] 2025-02-22 04:44:43,810 | INFO     | -- intersect: -2831962132.284278
[2025-02-21 23:45:01] 2025-02-22 04:44:43,810 | INFO     | intersect: -2831962132.284278
[2025-02-21 23:45:01] 2025-02-22 04:44:43,811 | INFO     | chi2: 3.2361115617205938
[2025-02-21 23:45:01] 2025-02-22 04:44:43,811 | INFO     | current chi2=3.2361115617205938 (change=23.52146620121275 %)
[2025-02-21 23:45:01] 2025-02-22 04:44:43,811 | INFO     | left removable region: 40
[2025-02-21 23:45:01] 2025-02-22 04:44:43,811 | INFO     | model: linear, x: [1740145849.0, 1740145912.0, 1740145972.0, 1740146033.0, 1740146094.0, 1740146155.0, 1740146216.0, 1740146276.0, 1740146341.0, 1740146398.0, 1740
[2025-02-21 23:45:01] 2025-02-22 04:44:43,812 | INFO     | sum of square deviations: 206313066749.51422
[2025-02-21 23:45:01] 2025-02-22 04:44:43,823 | INFO     | sum of deviations: 287466719973.9238
[2025-02-21 23:45:01] 2025-02-22 04:44:43,824 | INFO     | mean x: 1740172445.8957617
[2025-02-21 23:45:01] 2025-02-22 04:44:43,824 | INFO     | mean y: 2676383.7903780066
[2025-02-21 23:45:01] 2025-02-22 04:44:43,824 | INFO     | -- intersect: -2421996338.553481
[2025-02-21 23:45:01] 2025-02-22 04:44:43,824 | INFO     | intersect: -2421996338.553481
[2025-02-21 23:45:01] 2025-02-22 04:44:43,825 | INFO     | chi2: 0.15243124348292367
[2025-02-21 23:45:01] 2025-02-22 04:44:43,825 | INFO     | -- intersect: -2421996338.553481
[2025-02-21 23:45:01] 2025-02-22 04:44:43,825 | INFO     | current memory leak: 1.39 B/s (using 873 data points, chi2=0.15)
[2025-02-21 23:45:01] 2025-02-22 04:44:43,827 | INFO     | ..............................
[2025-02-21 23:45:01] 2025-02-22 04:44:43,827 | INFO     | . Timing measurements:
[2025-02-21 23:45:01] 2025-02-22 04:44:43,827 | INFO     | . get job = 0 s
[2025-02-21 23:45:01] 2025-02-22 04:44:43,827 | INFO     | . initial setup = 5 s
[2025-02-21 23:45:01] 2025-02-22 04:44:43,827 | INFO     | . payload setup = 64 s
[2025-02-21 23:45:01] 2025-02-22 04:44:43,827 | INFO     | . stage-in = 0 s
[2025-02-21 23:45:01] 2025-02-22 04:44:43,827 | INFO     | . payload execution = 56116 s
[2025-02-21 23:45:01] 2025-02-22 04:44:43,827 | INFO     | . stage-out = 4 s
[2025-02-21 23:45:01] 2025-02-22 04:44:43,827 | INFO     | . log creation = 0 s
[2025-02-21 23:45:01] 2025-02-22 04:44:43,828 | INFO     | ..............................
[2025-02-21 23:45:01] 2025-02-22 04:44:43,942 | INFO     | 
[2025-02-21 23:45:01] 2025-02-22 04:44:43,942 | INFO     | job summary report
[2025-02-21 23:45:01] 2025-02-22 04:44:43,942 | INFO     | --------------------------------------------------
[2025-02-21 23:45:01] 2025-02-22 04:44:43,942 | INFO     | PanDA job id: 6522039475
[2025-02-21 23:45:01] 2025-02-22 04:44:43,942 | INFO     | task id: 43078919
[2025-02-21 23:45:01] 2025-02-22 04:44:43,943 | INFO     | errors: (none)
[2025-02-21 23:45:01] 2025-02-22 04:44:43,943 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-21 23:45:01] 2025-02-22 04:44:43,943 | INFO     | pilot state: finished 
[2025-02-21 23:45:01] 2025-02-22 04:44:43,943 | INFO     | transexitcode: 0
[2025-02-21 23:45:01] 2025-02-22 04:44:43,943 | INFO     | exeerrorcode: 0
[2025-02-21 23:45:01] 2025-02-22 04:44:43,943 | INFO     | exeerrordiag: 
[2025-02-21 23:45:01] 2025-02-22 04:44:43,943 | INFO     | exitcode: 0
[2025-02-21 23:45:01] 2025-02-22 04:44:43,943 | INFO     | exitmsg: OK
[2025-02-21 23:45:01] 2025-02-22 04:44:43,943 | INFO     | cpuconsumptiontime: 113188 s
[2025-02-21 23:45:01] 2025-02-22 04:44:43,943 | INFO     | nevents: 400
[2025-02-21 23:45:01] 2025-02-22 04:44:43,943 | INFO     | neventsw: 0
[2025-02-21 23:45:01] 2025-02-22 04:44:43,944 | INFO     | pid: 5786
[2025-02-21 23:45:01] 2025-02-22 04:44:43,944 | INFO     | pgrp: 5786
[2025-02-21 23:45:01] 2025-02-22 04:44:43,944 | INFO     | corecount: 10
[2025-02-21 23:45:01] 2025-02-22 04:44:43,944 | INFO     | event service: False
[2025-02-21 23:45:01] 2025-02-22 04:44:43,944 | INFO     | sizes: {0: 2383128, 1: 2383212, 2: 2383411, 14: 2383411, 25: 2383439, 36: 2383467, 47: 2383885, 56184: 2433236, 56185: 2433235, 56190: 2442232, 56193: 2442288, 562
[2025-02-21 23:45:01] 2025-02-22 04:44:43,944 | INFO     | --------------------------------------------------
[2025-02-21 23:45:01] 2025-02-22 04:44:43,944 | INFO     | 
[2025-02-21 23:45:01] 2025-02-22 04:44:43,944 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-21 23:45:01] 2025-02-22 04:44:44,176 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-21 23:45:01] 2025-02-22 04:44:44,177 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-21 23:45:01] 2025-02-22 04:44:44,177 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-21 23:45:01] 2025-02-22 04:44:44,177 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-21 23:45:01] 2025-02-22 04:44:44,177 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-21 23:45:01] 2025-02-22 04:44:44,177 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-21 23:45:01] 2025-02-22 04:44:44,177 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-21 23:45:01] 2025-02-22 04:44:44,177 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-21 23:45:01] 2025-02-22 04:44:44,177 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-21 23:45:01] 2025-02-22 04:44:44,177 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-21 23:45:01] 2025-02-22 04:44:44,178 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-21 23:45:01] 2025-02-22 04:44:44,178 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-21 23:45:01] 2025-02-22 04:44:44,178 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-21 23:45:01] 2025-02-22 04:44:44,178 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-21 23:45:01] 2025-02-22 04:44:44,178 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-21 23:45:01] 2025-02-22 04:44:44,178 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-21 23:45:01] 2025-02-22 04:44:44,178 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-21 23:45:01] 2025-02-22 04:44:44,178 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-21 23:45:01] 2025-02-22 04:44:44,178 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-21 23:45:01] 2025-02-22 04:44:44,178 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-21 23:45:01] 2025-02-22 04:44:44,187 | INFO     | job 6522039475 has completed (purged errors)
[2025-02-21 23:45:01] 2025-02-22 04:44:44,187 | INFO     | overall cleanup function is called
[2025-02-21 23:45:01] 2025-02-22 04:44:45,196 | INFO     | --- collectZombieJob: --- 10, [5786]
[2025-02-21 23:45:01] 2025-02-22 04:44:45,196 | INFO     | zombie collector waiting for pid 5786
[2025-02-21 23:45:01] 2025-02-22 04:44:45,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-21 23:45:01] 2025-02-22 04:44:45,196 | INFO     | collected zombie processes
[2025-02-21 23:45:01] 2025-02-22 04:44:45,196 | INFO     | will attempt to kill all subprocesses of pid=5786
[2025-02-21 23:45:01] 2025-02-22 04:44:45,520 | INFO     | process IDs to be killed: [5786] (in reverse order)
[2025-02-21 23:45:01] 2025-02-22 04:44:46,376 | WARNING  | found no corresponding commands to process id(s)
[2025-02-21 23:45:01] 2025-02-22 04:44:46,377 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-21 23:45:01] 2025-02-22 04:44:46,462 | INFO     | did not find any defunct processes belonging to 5786
[2025-02-21 23:45:01] 2025-02-22 04:44:46,498 | INFO     | did not find any defunct processes belonging to 5786
[2025-02-21 23:45:01] 2025-02-22 04:44:46,533 | INFO     | ready for new job
[2025-02-21 23:45:01] 2025-02-22 04:44:46,533 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-21 23:45:01] 2025-02-22 04:44:46,582 | INFO     | **************************************
[2025-02-21 23:45:01] 2025-02-22 04:44:46,583 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-21 23:45:01] 2025-02-22 04:44:46,583 | INFO     | **************************************
[2025-02-21 23:45:01] 2025-02-22 04:44:46,583 | INFO     | 
[2025-02-21 23:45:01] 2025-02-22 04:44:46,617 | INFO     | architecture information:
[2025-02-21 23:45:01] 2025-02-22 04:44:46,643 | INFO     | executing command: cat /etc/os-release
[2025-02-21 23:45:01] 2025-02-22 04:44:46,716 | INFO     | cat /etc/os-release:
[2025-02-21 23:45:01] NAME="CentOS Linux"
[2025-02-21 23:45:01] VERSION="7 (Core)"
[2025-02-21 23:45:01] ID="centos"
[2025-02-21 23:45:01] ID_LIKE="rhel fedora"
[2025-02-21 23:45:01] VERSION_ID="7"
[2025-02-21 23:45:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-21 23:45:01] ANSI_COLOR="0;31"
[2025-02-21 23:45:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-21 23:45:01] HOME_URL="https://www.centos.org/"
[2025-02-21 23:45:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-21 23:45:01] 
[2025-02-21 23:45:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-21 23:45:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-21 23:45:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-21 23:45:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-21 23:45:01] 
[2025-02-21 23:45:01] 2025-02-22 04:44:46,716 | INFO     | **************************************
[2025-02-21 23:45:01] 2025-02-22 04:44:47,220 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-21 23:45:01] 2025-02-22 04:44:47,470 | INFO     | sufficient remaining disk space (55770611712 B)
[2025-02-21 23:45:01] 2025-02-22 04:44:47,470 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-21 23:45:01] 2025-02-22 04:44:47,470 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-21 23:45:01] 2025-02-22 04:44:47,488 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-21 23:45:01] 2025-02-22 04:44:47,488 | INFO     | aborting loop
[2025-02-21 23:45:01] 2025-02-22 04:44:47,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-21 23:45:01] 2025-02-22 04:44:48,026 | INFO     | all data control threads have been joined
[2025-02-21 23:45:01] 2025-02-22 04:44:48,151 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-21 23:45:01] 2025-02-22 04:44:48,494 | INFO     | [job] retrieve thread has finished
[2025-02-21 23:45:01] 2025-02-22 04:44:48,502 | INFO     | [job] job monitor thread has finished
[2025-02-21 23:45:01] 2025-02-22 04:44:48,600 | INFO     | [job] validate thread has finished
[2025-02-21 23:45:01] 2025-02-22 04:44:48,762 | INFO     | [payload] validate_post thread has finished
[2025-02-21 23:45:01] 2025-02-22 04:44:48,813 | INFO     | all job control threads have been joined
[2025-02-21 23:45:01] 2025-02-22 04:44:48,944 | INFO     | all payload control threads have been joined
[2025-02-21 23:45:01] 2025-02-22 04:44:48,983 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-21 23:45:01] 2025-02-22 04:44:49,036 | INFO     | [data] control thread has finished
[2025-02-21 23:45:01] 2025-02-22 04:44:49,084 | INFO     | PID=33319 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-21 23:45:01] 2025-02-22 04:44:49,084 | INFO     | .. there are 7 such processes running
[2025-02-21 23:45:01] 2025-02-22 04:44:49,085 | INFO     | found 0 job(s) in 20 queues
[2025-02-21 23:45:01] 2025-02-22 04:44:49,085 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-21 23:45:01] 2025-02-22 04:44:49,085 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-21 23:45:01] 2025-02-22 04:44:49,096 | INFO     | [payload] execute_payloads thread has finished
[2025-02-21 23:45:01] 2025-02-22 04:44:49,214 | INFO     | [job] create_data_payload thread has finished
[2025-02-21 23:45:01] 2025-02-22 04:44:49,424 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-21 23:45:01] 2025-02-22 04:44:49,517 | INFO     | [data] copytool_out thread has finished
[2025-02-21 23:45:01] 2025-02-22 04:44:49,606 | INFO     | [payload] validate_pre thread has finished
[2025-02-21 23:45:01] 2025-02-22 04:44:49,671 | INFO     | [data] copytool_in thread has finished
[2025-02-21 23:45:01] 2025-02-22 04:44:49,818 | INFO     | [job] control thread has finished
[2025-02-21 23:45:01] 2025-02-22 04:44:49,826 | INFO     | [payload] failed_post thread has finished
[2025-02-21 23:45:01] 2025-02-22 04:44:49,950 | INFO     | [payload] control thread has finished
[2025-02-21 23:45:01] 2025-02-22 04:44:49,989 | INFO     | [job] queue monitor thread has finished
[2025-02-21 23:45:01] 2025-02-22 04:44:52,164 | INFO     | [data] queue_monitor thread has finished
[2025-02-21 23:45:01] 2025-02-22 04:44:53,029 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140363295147840)>', '<ExcThread(monitor, started 140362861496064)>']
[2025-02-21 23:45:01] 2025-02-22 04:44:53,109 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-21 23:45:01] 2025-02-22 04:44:53,109 | INFO     | [monitor] control thread has ended
[2025-02-21 23:45:01] 2025-02-22 04:44:58,055 | INFO     | all workflow threads have been joined
[2025-02-21 23:45:01] 2025-02-22 04:44:58,055 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-21 23:45:01] 2025-02-22 04:44:58,055 | INFO     | traces error code: 0
[2025-02-21 23:45:01] 2025-02-22 04:44:58,056 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-21 23:45:01] 2025-02-22 04:44:59,623 [wrapper] ==== pilot stdout END ====
[2025-02-21 23:45:01] 2025-02-22 04:44:59,672 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-21 23:45:01] 2025-02-22 04:44:59,720 [wrapper] pilotpid: 33319
[2025-02-21 23:45:01] 2025-02-22 04:44:59,731 [wrapper] Pilot exit status: 0
[2025-02-21 23:45:01] 2025-02-22 04:44:59,846 [wrapper] pandaids: 6522039475
[2025-02-21 23:45:01] 2025-02-22 04:44:59,911 [wrapper] cleanup supervisor_pilot  5840 33320
[2025-02-21 23:45:01] 2025-02-22 04:44:59,916 [wrapper] Test setup, not cleaning
[2025-02-21 23:45:01] 2025-02-22 04:44:59,989 [wrapper] apfmon messages muted
[2025-02-21 23:45:01] 2025-02-22 04:45:00,029 [wrapper] ==== wrapper stdout END ====
[2025-02-21 23:45:01] 2025-02-22 04:45:00,079 [wrapper] ==== wrapper stderr END ====
[2025-02-21 23:45:01]  *** Error codes and diagnostics ***
[2025-02-21 23:45:01]     "exeErrorCode": 0,
[2025-02-21 23:45:01]     "exeErrorDiag": "",
[2025-02-21 23:45:01]     "pilotErrorCode": 0,
[2025-02-21 23:45:01]     "pilotErrorDiag": "",
[2025-02-21 23:45:01]  *** Listing of results directory ***
[2025-02-21 23:45:01] total 671016
[2025-02-21 23:45:01] -rw-r--r-- 1 boincer umatlas    491065 Feb 21 04:35 pilot3.tar.gz
[2025-02-21 23:45:01] -rw-r--r-- 1 boincer umatlas      5118 Feb 21 04:50 queuedata.json
[2025-02-21 23:45:01] -rwx------ 1 boincer umatlas     35865 Feb 21 04:51 runpilot2-wrapper.sh
[2025-02-21 23:45:01] -rw-r--r-- 1 boincer umatlas       100 Feb 21 08:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-21 23:45:01] -rwxr-xr-x 1 boincer umatlas      7986 Feb 21 08:03 run_atlas
[2025-02-21 23:45:01] -rw-r--r-- 1 boincer umatlas       105 Feb 21 08:03 job.xml
[2025-02-21 23:45:01] -rw-r--r-- 2 boincer umatlas 340051242 Feb 21 08:03 EVNT.43078917._000353.pool.root.1
[2025-02-21 23:45:01] -rw-r--r-- 2 boincer umatlas     17569 Feb 21 08:03 start_atlas.sh
[2025-02-21 23:45:01] drwxrwx--x 2 boincer umatlas      4096 Feb 21 08:03 shared
[2025-02-21 23:45:01] -rw-r--r-- 2 boincer umatlas    503558 Feb 21 08:03 input.tar.gz
[2025-02-21 23:45:01] -rw-r--r-- 1 boincer umatlas         0 Feb 21 08:03 boinc_lockfile
[2025-02-21 23:45:01] -rw-r--r-- 1 boincer umatlas      2543 Feb 21 08:04 pandaJob.out
[2025-02-21 23:45:01] -rw------- 1 boincer umatlas       467 Feb 21 08:04 setup.sh.local
[2025-02-21 23:45:01] -rw------- 1 boincer umatlas    991368 Feb 21 08:05 agis_schedconf.cvmfs.json
[2025-02-21 23:45:01] drwx------ 4 boincer umatlas      4096 Feb 21 08:05 pilot3
[2025-02-21 23:45:01] -rw------- 1 boincer umatlas 323324920 Feb 21 23:40 HITS.43078919._082243.pool.root.1
[2025-02-21 23:45:01] -rw-r--r-- 1 boincer umatlas      6229 Feb 21 23:40 init_data.xml
[2025-02-21 23:45:01] -rw-r--r-- 1 boincer umatlas       533 Feb 21 23:40 boinc_task_state.xml
[2025-02-21 23:45:01] -rw------- 1 boincer umatlas      1057 Feb 21 23:43 memory_monitor_summary.json
[2025-02-21 23:45:01] -rw------- 1 boincer umatlas   1582569 Feb 21 23:43 agis_ddmendpoints.agis.ALL.json
[2025-02-21 23:45:01] -rw------- 1 boincer umatlas    978877 Feb 21 23:43 log.43078919._082243.job.log.tgz.1
[2025-02-21 23:45:01] -rw------- 1 boincer umatlas        95 Feb 21 23:44 pilot_heartbeat.json
[2025-02-21 23:45:01] -rw------- 1 boincer umatlas      7772 Feb 21 23:44 heartbeat.json
[2025-02-21 23:45:01] -rw-r--r-- 1 boincer umatlas      8192 Feb 21 23:44 boinc_mmap_file
[2025-02-21 23:45:01] -rw-r--r-- 1 boincer umatlas        29 Feb 21 23:44 wrapper_checkpoint.txt
[2025-02-21 23:45:01] -rw------- 1 boincer umatlas      4607 Feb 21 23:44 pilotlog.txt
[2025-02-21 23:45:01] -rw------- 1 boincer umatlas   8987368 Feb 21 23:45 log.43078919._082243.job.log.1
[2025-02-21 23:45:01] -rw------- 1 boincer umatlas       357 Feb 21 23:45 output.list
[2025-02-21 23:45:01] -rw-r--r-- 1 boincer umatlas       620 Feb 21 23:45 runtime_log
[2025-02-21 23:45:01] -rw------- 1 boincer umatlas   9984000 Feb 21 23:45 result.tar.gz
[2025-02-21 23:45:01] -rw-r--r-- 1 boincer umatlas     11416 Feb 21 23:45 runtime_log.err
[2025-02-21 23:45:01] -rw------- 1 boincer umatlas       665 Feb 21 23:45 0mHNDmtre56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmfBdKDmZeNFLn.diag
[2025-02-21 23:45:01] -rw-r--r-- 1 boincer umatlas     21746 Feb 21 23:45 stderr.txt
[2025-02-21 23:45:01] HITS file was successfully produced:
[2025-02-21 23:45:01] -rw------- 1 boincer umatlas 323324920 Feb 21 23:40 shared/HITS.pool.root.1
[2025-02-21 23:45:01]  *** Contents of shared directory: ***
[2025-02-21 23:45:01] total 658104
[2025-02-21 23:45:01] -rw-r--r-- 2 boincer umatlas 340051242 Feb 21 08:03 ATLAS.root_0
[2025-02-21 23:45:01] -rw-r--r-- 2 boincer umatlas     17569 Feb 21 08:03 start_atlas.sh
[2025-02-21 23:45:01] -rw-r--r-- 2 boincer umatlas    503558 Feb 21 08:03 input.tar.gz
[2025-02-21 23:45:01] -rw------- 1 boincer umatlas 323324920 Feb 21 23:40 HITS.pool.root.1
[2025-02-21 23:45:01] -rw------- 1 boincer umatlas   9984000 Feb 21 23:45 result.tar.gz
23:45:03 (26410): run_atlas exited; CPU time 112950.929680
23:45:03 (26410): called boinc_finish(0)

</stderr_txt>
]]>

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