Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:56:38 (36747): wrapper (7.7.26015): starting
07:56:38 (36747): wrapper: running run_atlas (--nthreads 10)
[2025-02-21 07:56:38] Arguments: --nthreads 10
[2025-02-21 07:56:38] Threads: 10
[2025-02-21 07:56:38] Checking for CVMFS
[2025-02-21 07:56:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-21 07:56:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-21 07:56:39] Running cvmfs_config stat atlas.cern.ch
[2025-02-21 07:56:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-21 07:56:39] 2.11.2.0 5017 135024 200556 142901 3 465 13640273 18432000 9187 130560 0 51758416 99.006 122497613 40524 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-21 07:56:39] CVMFS is ok
[2025-02-21 07:56:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-21 07:56:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-21 07:56:39] Further information can be found at the LHC@home message board.
[2025-02-21 07:56:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-21 07:56:39] Checking for apptainer binary...
[2025-02-21 07:56:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-21 07:56:39] Running /usr/bin/apptainer --version
[2025-02-21 07:56:39] apptainer version 1.3.2-1.el7
[2025-02-21 07:56:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-21 07:56:43] c-210-10.aglt2.org
[2025-02-21 07:56:43] apptainer works
[2025-02-21 07:56:43] Set ATHENA_PROC_NUMBER=10
[2025-02-21 07:56:43] Set ATHENA_CORE_NUMBER=10
[2025-02-21 07:56:43] Starting ATLAS job with PandaID=6521998132
[2025-02-21 07:56:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-21 20:45:14]  *** The last 200 lines of the pilot log: ***
[2025-02-21 20:45:14] 2025-02-22 01:44:58,535 | INFO     | mean y: 2627844.6248331107
[2025-02-21 20:45:14] 2025-02-22 01:44:58,535 | INFO     | -- intersect: -9948617384.145523
[2025-02-21 20:45:14] 2025-02-22 01:44:58,536 | INFO     | intersect: -9948617384.145523
[2025-02-21 20:45:14] 2025-02-22 01:44:58,537 | INFO     | chi2: 6.7279356492287405
[2025-02-21 20:45:14] 2025-02-22 01:44:58,537 | INFO     | current chi2=6.7279356492287405 (change=10.719321475089693 %)
[2025-02-21 20:45:14] 2025-02-22 01:44:58,537 | INFO     | right removable region: 748
[2025-02-21 20:45:14] 2025-02-22 01:44:58,538 | INFO     | model: linear, x: [1740143032.0, 1740143093.0, 1740143154.0, 1740143215.0, 1740143276.0, 1740143337.0, 1740143398.0, 1740143459.0, 1740143520.0, 1740143581.0, 1740
[2025-02-21 20:45:14] 2025-02-22 01:44:58,539 | INFO     | sum of square deviations: 130289460984.36232
[2025-02-21 20:45:14] 2025-02-22 01:44:58,553 | INFO     | sum of deviations: 467845809434.12506
[2025-02-21 20:45:14] 2025-02-22 01:44:58,553 | INFO     | mean x: 1740165846.5807743
[2025-02-21 20:45:14] 2025-02-22 01:44:58,554 | INFO     | mean y: 2638224.369826435
[2025-02-21 20:45:14] 2025-02-22 01:44:58,554 | INFO     | -- intersect: -6245981525.012019
[2025-02-21 20:45:14] 2025-02-22 01:44:58,554 | INFO     | intersect: -6245981525.012019
[2025-02-21 20:45:14] 2025-02-22 01:44:58,555 | INFO     | chi2: 4.476363281686196
[2025-02-21 20:45:14] 2025-02-22 01:44:58,555 | INFO     | current chi2=4.476363281686196 (change=40.59801223592973 %)
[2025-02-21 20:45:14] 2025-02-22 01:44:58,556 | INFO     | model: linear, x: [1740143337.0, 1740143398.0, 1740143459.0, 1740143520.0, 1740143581.0, 1740143642.0, 1740143703.0, 1740143764.0, 1740143825.0, 1740143886.0, 1740
[2025-02-21 20:45:14] 2025-02-22 01:44:58,556 | INFO     | sum of square deviations: 127697354127.66547
[2025-02-21 20:45:14] 2025-02-22 01:44:58,574 | INFO     | sum of deviations: 291479998640.20166
[2025-02-21 20:45:14] 2025-02-22 01:44:58,574 | INFO     | mean x: 1740165999.0846775
[2025-02-21 20:45:14] 2025-02-22 01:44:58,575 | INFO     | mean y: 2648599.9650537632
[2025-02-21 20:45:14] 2025-02-22 01:44:58,575 | INFO     | -- intersect: -3969427301.778611
[2025-02-21 20:45:14] 2025-02-22 01:44:58,575 | INFO     | intersect: -3969427301.778611
[2025-02-21 20:45:14] 2025-02-22 01:44:58,576 | INFO     | chi2: 2.755361572202583
[2025-02-21 20:45:14] 2025-02-22 01:44:58,576 | INFO     | current chi2=2.755361572202583 (change=38.4464262881571 %)
[2025-02-21 20:45:14] 2025-02-22 01:44:58,577 | INFO     | model: linear, x: [1740143642.0, 1740143703.0, 1740143764.0, 1740143825.0, 1740143886.0, 1740143947.0, 1740144008.0, 1740144069.0, 1740144130.0, 1740144191.0, 1740
[2025-02-21 20:45:14] 2025-02-22 01:44:58,577 | INFO     | sum of square deviations: 125139852570.9445
[2025-02-21 20:45:14] 2025-02-22 01:44:58,591 | INFO     | sum of deviations: 138227496555.4816
[2025-02-21 20:45:14] 2025-02-22 01:44:58,591 | INFO     | mean x: 1740166151.5886333
[2025-02-21 20:45:14] 2025-02-22 01:44:58,591 | INFO     | mean y: 2657732.962110961
[2025-02-21 20:45:14] 2025-02-22 01:44:58,591 | INFO     | -- intersect: -1919502200.767368
[2025-02-21 20:45:14] 2025-02-22 01:44:58,592 | INFO     | intersect: -1919502200.767368
[2025-02-21 20:45:14] 2025-02-22 01:44:58,592 | INFO     | chi2: 1.4160324960939679
[2025-02-21 20:45:14] 2025-02-22 01:44:58,593 | INFO     | current chi2=1.4160324960939679 (change=48.60810608743379 %)
[2025-02-21 20:45:14] 2025-02-22 01:44:58,593 | INFO     | model: linear, x: [1740143947.0, 1740144008.0, 1740144069.0, 1740144130.0, 1740144191.0, 1740144252.0, 1740144313.0, 1740144374.0, 1740144435.0, 1740144496.0, 1740
[2025-02-21 20:45:14] 2025-02-22 01:44:58,594 | INFO     | sum of square deviations: 122616723751.70035
[2025-02-21 20:45:14] 2025-02-22 01:44:58,606 | INFO     | sum of deviations: 64552171847.27267
[2025-02-21 20:45:14] 2025-02-22 01:44:58,607 | INFO     | mean x: 1740166304.092643
[2025-02-21 20:45:14] 2025-02-22 01:44:58,607 | INFO     | mean y: 2662182.643051771
[2025-02-21 20:45:14] 2025-02-22 01:44:58,607 | INFO     | -- intersect: -913456849.6358867
[2025-02-21 20:45:14] 2025-02-22 01:44:58,607 | INFO     | intersect: -913456849.6358867
[2025-02-21 20:45:14] 2025-02-22 01:44:58,608 | INFO     | chi2: 1.1120990965652877
[2025-02-21 20:45:14] 2025-02-22 01:44:58,608 | INFO     | current chi2=1.1120990965652877 (change=21.463730554705513 %)
[2025-02-21 20:45:14] 2025-02-22 01:44:58,608 | INFO     | left removable region: 40
[2025-02-21 20:45:14] 2025-02-22 01:44:58,609 | INFO     | model: linear, x: [1740145170.0, 1740145230.0, 1740145290.0, 1740145350.0, 1740145412.0, 1740145473.0, 1740145533.0, 1740145599.0, 1740145657.0, 1740145717.0, 1740
[2025-02-21 20:45:14] 2025-02-22 01:44:58,609 | INFO     | sum of square deviations: 110042386712.27538
[2025-02-21 20:45:14] 2025-02-22 01:44:58,621 | INFO     | sum of deviations: 8986557330.423754
[2025-02-21 20:45:14] 2025-02-22 01:44:58,622 | INFO     | mean x: 1740166731.0974576
[2025-02-21 20:45:14] 2025-02-22 01:44:58,622 | INFO     | mean y: 2672074.790960452
[2025-02-21 20:45:14] 2025-02-22 01:44:58,622 | INFO     | -- intersect: -139437784.51618004
[2025-02-21 20:45:14] 2025-02-22 01:44:58,622 | INFO     | intersect: -139437784.51618004
[2025-02-21 20:45:14] 2025-02-22 01:44:58,623 | INFO     | chi2: 0.029527878067636033
[2025-02-21 20:45:14] 2025-02-22 01:44:58,623 | INFO     | -- intersect: -139437784.51618004
[2025-02-21 20:45:14] 2025-02-22 01:44:58,624 | INFO     | current memory leak: 0.08 B/s (using 708 data points, chi2=0.03)
[2025-02-21 20:45:14] 2025-02-22 01:44:58,625 | INFO     | ..............................
[2025-02-21 20:45:14] 2025-02-22 01:44:58,625 | INFO     | . Timing measurements:
[2025-02-21 20:45:14] 2025-02-22 01:44:58,625 | INFO     | . get job = 0 s
[2025-02-21 20:45:14] 2025-02-22 01:44:58,625 | INFO     | . initial setup = 4 s
[2025-02-21 20:45:14] 2025-02-22 01:44:58,625 | INFO     | . payload setup = 20 s
[2025-02-21 20:45:14] 2025-02-22 01:44:58,625 | INFO     | . stage-in = 0 s
[2025-02-21 20:45:14] 2025-02-22 01:44:58,626 | INFO     | . payload execution = 45984 s
[2025-02-21 20:45:14] 2025-02-22 01:44:58,626 | INFO     | . stage-out = 2 s
[2025-02-21 20:45:14] 2025-02-22 01:44:58,626 | INFO     | . log creation = 0 s
[2025-02-21 20:45:14] 2025-02-22 01:44:58,626 | INFO     | ..............................
[2025-02-21 20:45:14] 2025-02-22 01:44:58,840 | WARNING  | process 19837 can no longer be monitored (due to stat problems) - aborting
[2025-02-21 20:45:14] 2025-02-22 01:44:58,840 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6521998132/memory_monitor_summary.json (trf name=prmon)
[2025-02-21 20:45:14] 2025-02-22 01:44:58,980 | INFO     | number of running child processes to parent process 19837: 1
[2025-02-21 20:45:14] 2025-02-22 01:44:58,981 | INFO     | maximum number of monitored processes: 6
[2025-02-21 20:45:14] 2025-02-22 01:44:58,981 | INFO     | aborting job monitoring since job object (job id=6521998132) has expired
[2025-02-21 20:45:14] 2025-02-22 01:44:59,040 | INFO     | 
[2025-02-21 20:45:14] 2025-02-22 01:44:59,041 | INFO     | job summary report
[2025-02-21 20:45:14] 2025-02-22 01:44:59,041 | INFO     | --------------------------------------------------
[2025-02-21 20:45:14] 2025-02-22 01:44:59,041 | INFO     | PanDA job id: 6521998132
[2025-02-21 20:45:14] 2025-02-22 01:44:59,041 | INFO     | task id: 43205094
[2025-02-21 20:45:14] 2025-02-22 01:44:59,041 | INFO     | errors: (none)
[2025-02-21 20:45:14] 2025-02-22 01:44:59,041 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-21 20:45:14] 2025-02-22 01:44:59,041 | INFO     | pilot state: finished 
[2025-02-21 20:45:14] 2025-02-22 01:44:59,041 | INFO     | transexitcode: 0
[2025-02-21 20:45:14] 2025-02-22 01:44:59,041 | INFO     | exeerrorcode: 0
[2025-02-21 20:45:14] 2025-02-22 01:44:59,041 | INFO     | exeerrordiag: 
[2025-02-21 20:45:14] 2025-02-22 01:44:59,041 | INFO     | exitcode: 0
[2025-02-21 20:45:14] 2025-02-22 01:44:59,042 | INFO     | exitmsg: OK
[2025-02-21 20:45:14] 2025-02-22 01:44:59,042 | INFO     | cpuconsumptiontime: 115850 s
[2025-02-21 20:45:14] 2025-02-22 01:44:59,042 | INFO     | nevents: 400
[2025-02-21 20:45:14] 2025-02-22 01:44:59,042 | INFO     | neventsw: 0
[2025-02-21 20:45:14] 2025-02-22 01:44:59,042 | INFO     | pid: 19837
[2025-02-21 20:45:14] 2025-02-22 01:44:59,042 | INFO     | pgrp: 19837
[2025-02-21 20:45:14] 2025-02-22 01:44:59,042 | INFO     | corecount: 10
[2025-02-21 20:45:14] 2025-02-22 01:44:59,042 | INFO     | event service: False
[2025-02-21 20:45:14] 2025-02-22 01:44:59,042 | INFO     | sizes: {0: 2383188, 1: 2383387, 12: 2383387, 14: 2383621, 23: 2383649, 46009: 2428210, 46013: 2437207, 46023: 2437321}
[2025-02-21 20:45:14] 2025-02-22 01:44:59,042 | INFO     | --------------------------------------------------
[2025-02-21 20:45:14] 2025-02-22 01:44:59,042 | INFO     | 
[2025-02-21 20:45:14] 2025-02-22 01:44:59,043 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-21 20:45:14] 2025-02-22 01:44:59,067 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-21 20:45:14] 2025-02-22 01:44:59,068 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-21 20:45:14] 2025-02-22 01:44:59,068 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-21 20:45:14] 2025-02-22 01:44:59,068 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-21 20:45:14] 2025-02-22 01:44:59,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-21 20:45:14] 2025-02-22 01:44:59,068 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-21 20:45:14] 2025-02-22 01:44:59,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-21 20:45:14] 2025-02-22 01:44:59,068 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-21 20:45:14] 2025-02-22 01:44:59,068 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-21 20:45:14] 2025-02-22 01:44:59,068 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-21 20:45:14] 2025-02-22 01:44:59,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-21 20:45:14] 2025-02-22 01:44:59,069 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-21 20:45:14] 2025-02-22 01:44:59,069 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-21 20:45:14] 2025-02-22 01:44:59,069 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-21 20:45:14] 2025-02-22 01:44:59,069 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-21 20:45:14] 2025-02-22 01:44:59,069 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-21 20:45:14] 2025-02-22 01:44:59,069 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-21 20:45:14] 2025-02-22 01:44:59,069 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-21 20:45:14] 2025-02-22 01:44:59,069 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-21 20:45:14] 2025-02-22 01:44:59,069 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-21 20:45:14] 2025-02-22 01:44:59,069 | INFO     | job 6521998132 has completed (purged errors)
[2025-02-21 20:45:14] 2025-02-22 01:44:59,070 | INFO     | overall cleanup function is called
[2025-02-21 20:45:14] 2025-02-22 01:44:59,730 | INFO     | PID=5910 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-02-21 20:45:14] 2025-02-22 01:44:59,731 | INFO     | .. there are 12 such processes running
[2025-02-21 20:45:14] 2025-02-22 01:45:00,078 | INFO     | --- collectZombieJob: --- 10, [19837]
[2025-02-21 20:45:14] 2025-02-22 01:45:00,078 | INFO     | zombie collector waiting for pid 19837
[2025-02-21 20:45:14] 2025-02-22 01:45:00,078 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-21 20:45:14] 2025-02-22 01:45:00,078 | INFO     | collected zombie processes
[2025-02-21 20:45:14] 2025-02-22 01:45:00,079 | INFO     | will attempt to kill all subprocesses of pid=19837
[2025-02-21 20:45:14] 2025-02-22 01:45:00,225 | INFO     | process IDs to be killed: [19837] (in reverse order)
[2025-02-21 20:45:14] 2025-02-22 01:45:00,302 | WARNING  | found no corresponding commands to process id(s)
[2025-02-21 20:45:14] 2025-02-22 01:45:00,302 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-21 20:45:14] 2025-02-22 01:45:00,312 | INFO     | did not find any defunct processes belonging to 19837
[2025-02-21 20:45:14] 2025-02-22 01:45:00,319 | INFO     | did not find any defunct processes belonging to 19837
[2025-02-21 20:45:14] 2025-02-22 01:45:00,319 | INFO     | ready for new job
[2025-02-21 20:45:14] 2025-02-22 01:45:00,319 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-21 20:45:14] 2025-02-22 01:45:00,322 | INFO     | **************************************
[2025-02-21 20:45:14] 2025-02-22 01:45:00,323 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-21 20:45:14] 2025-02-22 01:45:00,323 | INFO     | **************************************
[2025-02-21 20:45:14] 2025-02-22 01:45:00,323 | INFO     | 
[2025-02-21 20:45:14] 2025-02-22 01:45:00,326 | INFO     | architecture information:
[2025-02-21 20:45:14] 2025-02-22 01:45:00,326 | INFO     | executing command: cat /etc/os-release
[2025-02-21 20:45:14] 2025-02-22 01:45:00,344 | INFO     | cat /etc/os-release:
[2025-02-21 20:45:14] NAME="CentOS Linux"
[2025-02-21 20:45:14] VERSION="7 (Core)"
[2025-02-21 20:45:14] ID="centos"
[2025-02-21 20:45:14] ID_LIKE="rhel fedora"
[2025-02-21 20:45:14] VERSION_ID="7"
[2025-02-21 20:45:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-21 20:45:14] ANSI_COLOR="0;31"
[2025-02-21 20:45:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-21 20:45:14] HOME_URL="https://www.centos.org/"
[2025-02-21 20:45:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-21 20:45:14] 
[2025-02-21 20:45:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-21 20:45:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-21 20:45:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-21 20:45:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-21 20:45:14] 
[2025-02-21 20:45:14] 2025-02-22 01:45:00,345 | INFO     | **************************************
[2025-02-21 20:45:14] 2025-02-22 01:45:00,847 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-21 20:45:14] 2025-02-22 01:45:00,865 | INFO     | sufficient remaining disk space (56569626624 B)
[2025-02-21 20:45:14] 2025-02-22 01:45:00,866 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-21 20:45:14] 2025-02-22 01:45:00,866 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-21 20:45:14] 2025-02-22 01:45:00,866 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-21 20:45:14] 2025-02-22 01:45:00,866 | INFO     | aborting loop
[2025-02-21 20:45:14] 2025-02-22 01:45:01,000 | INFO     | all payload control threads have been joined
[2025-02-21 20:45:14] 2025-02-22 01:45:01,089 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-21 20:45:14] 2025-02-22 01:45:01,707 | INFO     | all job control threads have been joined
[2025-02-21 20:45:14] 2025-02-22 01:45:01,712 | INFO     | all data control threads have been joined
[2025-02-21 20:45:14] 2025-02-22 01:45:01,738 | INFO     | found 0 job(s) in 20 queues
[2025-02-21 20:45:14] 2025-02-22 01:45:01,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-21 20:45:14] 2025-02-22 01:45:01,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-21 20:45:14] 2025-02-22 01:45:01,872 | INFO     | [job] retrieve thread has finished
[2025-02-21 20:45:14] 2025-02-22 01:45:01,881 | INFO     | [job] job monitor thread has finished
[2025-02-21 20:45:14] 2025-02-22 01:45:02,006 | INFO     | [payload] control thread has finished
[2025-02-21 20:45:14] 2025-02-22 01:45:02,036 | INFO     | [payload] execute_payloads thread has finished
[2025-02-21 20:45:14] 2025-02-22 01:45:02,198 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-21 20:45:14] 2025-02-22 01:45:02,533 | INFO     | [job] validate thread has finished
[2025-02-21 20:45:14] 2025-02-22 01:45:02,712 | INFO     | [job] control thread has finished
[2025-02-21 20:45:14] 2025-02-22 01:45:02,717 | INFO     | [data] control thread has finished
[2025-02-21 20:45:14] 2025-02-22 01:45:03,050 | INFO     | [payload] validate_pre thread has finished
[2025-02-21 20:45:14] 2025-02-22 01:45:03,074 | INFO     | [data] copytool_in thread has finished
[2025-02-21 20:45:14] 2025-02-22 01:45:03,095 | INFO     | [data] copytool_out thread has finished
[2025-02-21 20:45:14] 2025-02-22 01:45:03,160 | INFO     | [payload] failed_post thread has finished
[2025-02-21 20:45:14] 2025-02-22 01:45:03,209 | INFO     | [payload] validate_post thread has finished
[2025-02-21 20:45:14] 2025-02-22 01:45:03,235 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-21 20:45:14] 2025-02-22 01:45:03,247 | INFO     | [job] create_data_payload thread has finished
[2025-02-21 20:45:14] 2025-02-22 01:45:03,848 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-21 20:45:14] 2025-02-22 01:45:04,853 | INFO     | [job] queue monitor thread has finished
[2025-02-21 20:45:14] 2025-02-22 01:45:07,246 | INFO     | [data] queue_monitor thread has finished
[2025-02-21 20:45:14] 2025-02-22 01:45:08,713 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139933938886464)>', '<ExcThread(monitor, started 139933507376896)>']
[2025-02-21 20:45:14] 2025-02-22 01:45:08,777 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-21 20:45:14] 2025-02-22 01:45:08,777 | INFO     | [monitor] control thread has ended
[2025-02-21 20:45:14] 2025-02-22 01:45:13,739 | INFO     | all workflow threads have been joined
[2025-02-21 20:45:14] 2025-02-22 01:45:13,741 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-21 20:45:14] 2025-02-22 01:45:13,741 | INFO     | traces error code: 0
[2025-02-21 20:45:14] 2025-02-22 01:45:13,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-21 20:45:14] 2025-02-22 01:45:14,025 [wrapper] ==== pilot stdout END ====
[2025-02-21 20:45:14] 2025-02-22 01:45:14,032 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-21 20:45:14] 2025-02-22 01:45:14,035 [wrapper] pilotpid: 5910
[2025-02-21 20:45:14] 2025-02-22 01:45:14,039 [wrapper] Pilot exit status: 0
[2025-02-21 20:45:14] 2025-02-22 01:45:14,053 [wrapper] pandaids: 6521998132
[2025-02-21 20:45:14] 2025-02-22 01:45:14,118 [wrapper] cleanup supervisor_pilot  5797 5911
[2025-02-21 20:45:14] 2025-02-22 01:45:14,121 [wrapper] Test setup, not cleaning
[2025-02-21 20:45:14] 2025-02-22 01:45:14,128 [wrapper] apfmon messages muted
[2025-02-21 20:45:14] 2025-02-22 01:45:14,145 [wrapper] ==== wrapper stdout END ====
[2025-02-21 20:45:14] 2025-02-22 01:45:14,159 [wrapper] ==== wrapper stderr END ====
[2025-02-21 20:45:14]  *** Error codes and diagnostics ***
[2025-02-21 20:45:14]     "exeErrorCode": 0,
[2025-02-21 20:45:14]     "exeErrorDiag": "",
[2025-02-21 20:45:14]     "pilotErrorCode": 0,
[2025-02-21 20:45:14]     "pilotErrorDiag": "",
[2025-02-21 20:45:14]  *** Listing of results directory ***
[2025-02-21 20:45:14] total 669960
[2025-02-21 20:45:14] -rw-r--r-- 1 boincer umatlas    491065 Feb 21 04:35 pilot3.tar.gz
[2025-02-21 20:45:14] -rw-r--r-- 1 boincer umatlas      5118 Feb 21 04:39 queuedata.json
[2025-02-21 20:45:14] -rwx------ 1 boincer umatlas     35865 Feb 21 04:41 runpilot2-wrapper.sh
[2025-02-21 20:45:14] -rw-r--r-- 1 boincer umatlas       100 Feb 21 07:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-21 20:45:14] -rwxr-xr-x 1 boincer umatlas      7986 Feb 21 07:56 run_atlas
[2025-02-21 20:45:14] -rw-r--r-- 1 boincer umatlas       105 Feb 21 07:56 job.xml
[2025-02-21 20:45:14] -rw-r--r-- 2 boincer umatlas 341226952 Feb 21 07:56 EVNT.43092757._002015.pool.root.1
[2025-02-21 20:45:14] -rw-r--r-- 2 boincer umatlas     17569 Feb 21 07:56 start_atlas.sh
[2025-02-21 20:45:14] drwxrwx--x 2 boincer umatlas      4096 Feb 21 07:56 shared
[2025-02-21 20:45:14] -rw-r--r-- 2 boincer umatlas    503559 Feb 21 07:56 input.tar.gz
[2025-02-21 20:45:14] -rw-r--r-- 1 boincer umatlas         0 Feb 21 07:56 boinc_lockfile
[2025-02-21 20:45:14] -rw-r--r-- 1 boincer umatlas      2547 Feb 21 07:56 pandaJob.out
[2025-02-21 20:45:14] -rw------- 1 boincer umatlas       424 Feb 21 07:56 setup.sh.local
[2025-02-21 20:45:14] -rw------- 1 boincer umatlas    991368 Feb 21 07:57 agis_schedconf.cvmfs.json
[2025-02-21 20:45:14] drwx------ 4 boincer umatlas      4096 Feb 21 07:57 pilot3
[2025-02-21 20:45:14] -rw-r--r-- 1 boincer umatlas      6145 Feb 21 20:38 init_data.xml
[2025-02-21 20:45:14] -rw------- 1 boincer umatlas 326963740 Feb 21 20:43 HITS.43205094._032163.pool.root.1
[2025-02-21 20:45:14] -rw-r--r-- 1 boincer umatlas       533 Feb 21 20:43 boinc_task_state.xml
[2025-02-21 20:45:14] -rw------- 1 boincer umatlas      1058 Feb 21 20:44 memory_monitor_summary.json
[2025-02-21 20:45:14] -rw------- 1 boincer umatlas        95 Feb 21 20:44 pilot_heartbeat.json
[2025-02-21 20:45:14] -rw------- 1 boincer umatlas   1582569 Feb 21 20:44 agis_ddmendpoints.agis.ALL.json
[2025-02-21 20:45:14] -rw------- 1 boincer umatlas    832239 Feb 21 20:44 log.43205094._032163.job.log.tgz.1
[2025-02-21 20:45:14] -rw------- 1 boincer umatlas      7771 Feb 21 20:44 heartbeat.json
[2025-02-21 20:45:14] -rw-r--r-- 1 boincer umatlas        29 Feb 21 20:45 wrapper_checkpoint.txt
[2025-02-21 20:45:14] -rw-r--r-- 1 boincer umatlas      8192 Feb 21 20:45 boinc_mmap_file
[2025-02-21 20:45:14] -rw------- 1 boincer umatlas      4215 Feb 21 20:45 pilotlog.txt
[2025-02-21 20:45:14] -rw------- 1 boincer umatlas   6188293 Feb 21 20:45 log.43205094._032163.job.log.1
[2025-02-21 20:45:14] -rw------- 1 boincer umatlas       357 Feb 21 20:45 output.list
[2025-02-21 20:45:14] -rw-r--r-- 1 boincer umatlas       620 Feb 21 20:45 runtime_log
[2025-02-21 20:45:14] -rw------- 1 boincer umatlas   7034880 Feb 21 20:45 result.tar.gz
[2025-02-21 20:45:14] -rw-r--r-- 1 boincer umatlas     11016 Feb 21 20:45 runtime_log.err
[2025-02-21 20:45:14] -rw------- 1 boincer umatlas       665 Feb 21 20:45 KUaNDmkie56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmABdKDmFHBStm.diag
[2025-02-21 20:45:14] -rw-r--r-- 1 boincer umatlas     21763 Feb 21 20:45 stderr.txt
[2025-02-21 20:45:14] HITS file was successfully produced:
[2025-02-21 20:45:14] -rw------- 1 boincer umatlas 326963740 Feb 21 20:43 shared/HITS.pool.root.1
[2025-02-21 20:45:14]  *** Contents of shared directory: ***
[2025-02-21 20:45:14] total 659924
[2025-02-21 20:45:14] -rw-r--r-- 2 boincer umatlas 341226952 Feb 21 07:56 ATLAS.root_0
[2025-02-21 20:45:14] -rw-r--r-- 2 boincer umatlas     17569 Feb 21 07:56 start_atlas.sh
[2025-02-21 20:45:14] -rw-r--r-- 2 boincer umatlas    503559 Feb 21 07:56 input.tar.gz
[2025-02-21 20:45:14] -rw------- 1 boincer umatlas 326963740 Feb 21 20:43 HITS.pool.root.1
[2025-02-21 20:45:14] -rw------- 1 boincer umatlas   7034880 Feb 21 20:45 result.tar.gz
20:45:16 (36747): run_atlas exited; CPU time 115460.171534
20:45:16 (36747): called boinc_finish(0)

</stderr_txt>
]]>

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