Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:19:08 (1294174): wrapper (7.7.26015): starting
08:19:08 (1294174): wrapper: running run_atlas (--nthreads 4)
[2025-02-23 08:19:08] Arguments: --nthreads 4
[2025-02-23 08:19:08] Threads: 4
[2025-02-23 08:19:08] Checking for CVMFS
[2025-02-23 08:19:08] No cvmfs_config command found, will try listing directly
[2025-02-23 08:19:08] CVMFS is ok
[2025-02-23 08:19:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 08:19:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 08:19:08] Further information can be found at the LHC@home message board.
[2025-02-23 08:19:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 08:19:08] Checking for apptainer binary...
[2025-02-23 08:19:08] which: no apptainer in ((null))
[2025-02-23 08:19:08] apptainer is not installed, using version from CVMFS
[2025-02-23 08:19:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 08:19:08] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-02-23 08:19:08] apptainer works
[2025-02-23 08:19:08] Set ATHENA_PROC_NUMBER=4
[2025-02-23 08:19:08] Set ATHENA_CORE_NUMBER=4
[2025-02-23 08:19:08] Starting ATLAS job with PandaID=6521839850
[2025-02-23 08:19:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-23 15:33:00]  *** The last 200 lines of the pilot log: ***
[2025-02-23 15:33:00] 2025-02-23 14:30:51,312 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-23 15:33:00] 2025-02-23 14:30:51,313 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-23 15:33:00] 2025-02-23 14:30:51,321 | INFO     | fitting pss+swap vs Time
[2025-02-23 15:33:00] 2025-02-23 14:30:51,322 | INFO     | model: linear, x: [1740295188.0, 1740295249.0, 1740295310.0, 1740295371.0, 1740295432.0, 1740295493.0, 1740295554.0, 1740295615.0, 1740295676.0, 1740295737.0, 1740
[2025-02-23 15:33:00] 2025-02-23 14:30:51,322 | INFO     | sum of square deviations: 23635978050.0
[2025-02-23 15:33:00] 2025-02-23 14:30:51,326 | INFO     | sum of deviations: 140598056766.49997
[2025-02-23 15:33:00] 2025-02-23 14:30:51,327 | INFO     | mean x: 1740308089.5
[2025-02-23 15:33:00] 2025-02-23 14:30:51,327 | INFO     | mean y: 2346683.7523584906
[2025-02-23 15:33:00] 2025-02-23 14:30:51,327 | INFO     | -- intersect: -10349834852.425709
[2025-02-23 15:33:00] 2025-02-23 14:30:51,327 | INFO     | intersect: -10349834852.425709
[2025-02-23 15:33:00] 2025-02-23 14:30:51,327 | INFO     | chi2: 4.668997328488448
[2025-02-23 15:33:00] 2025-02-23 14:30:51,328 | INFO     | model: linear, x: [1740295188.0, 1740295249.0, 1740295310.0, 1740295371.0, 1740295432.0, 1740295493.0, 1740295554.0, 1740295615.0, 1740295676.0, 1740295737.0, 1740
[2025-02-23 15:33:00] 2025-02-23 14:30:51,328 | INFO     | sum of square deviations: 22809618370.0
[2025-02-23 15:33:00] 2025-02-23 14:30:51,334 | INFO     | sum of deviations: 166267907887.99997
[2025-02-23 15:33:00] 2025-02-23 14:30:51,334 | INFO     | mean x: 1740307937.0
[2025-02-23 15:33:00] 2025-02-23 14:30:51,334 | INFO     | mean y: 2351372.4988066824
[2025-02-23 15:33:00] 2025-02-23 14:30:51,334 | INFO     | -- intersect: -12683409304.078056
[2025-02-23 15:33:00] 2025-02-23 14:30:51,334 | INFO     | intersect: -12683409304.078056
[2025-02-23 15:33:00] 2025-02-23 14:30:51,335 | INFO     | chi2: 3.867496821897203
[2025-02-23 15:33:00] 2025-02-23 14:30:51,335 | INFO     | current chi2=3.867496821897203 (change=17.166437464009533 %)
[2025-02-23 15:33:00] 2025-02-23 14:30:51,335 | INFO     | right removable region: 418
[2025-02-23 15:33:00] 2025-02-23 14:30:51,335 | INFO     | model: linear, x: [1740295493.0, 1740295554.0, 1740295615.0, 1740295676.0, 1740295737.0, 1740295798.0, 1740295859.0, 1740295920.0, 1740295981.0, 1740296042.0, 1740
[2025-02-23 15:33:00] 2025-02-23 14:30:51,336 | INFO     | sum of square deviations: 22809618370.0
[2025-02-23 15:33:00] 2025-02-23 14:30:51,340 | INFO     | sum of deviations: 44974155213.000015
[2025-02-23 15:33:00] 2025-02-23 14:30:51,341 | INFO     | mean x: 1740308242.0
[2025-02-23 15:33:00] 2025-02-23 14:30:51,341 | INFO     | mean y: 2364306.7422434366
[2025-02-23 15:33:00] 2025-02-23 14:30:51,341 | INFO     | -- intersect: -3429034313.1098604
[2025-02-23 15:33:00] 2025-02-23 14:30:51,341 | INFO     | intersect: -3429034313.1098604
[2025-02-23 15:33:00] 2025-02-23 14:30:51,342 | INFO     | chi2: 2.424987332475588
[2025-02-23 15:33:00] 2025-02-23 14:30:51,342 | INFO     | current chi2=2.424987332475588 (change=48.06192503732575 %)
[2025-02-23 15:33:00] 2025-02-23 14:30:51,342 | INFO     | model: linear, x: [1740295798.0, 1740295859.0, 1740295920.0, 1740295981.0, 1740296042.0, 1740296103.0, 1740296164.0, 1740296225.0, 1740296286.0, 1740296347.0, 1740
[2025-02-23 15:33:00] 2025-02-23 14:30:51,343 | INFO     | sum of square deviations: 22002747427.5
[2025-02-23 15:33:00] 2025-02-23 14:30:51,347 | INFO     | sum of deviations: -34930072784.00001
[2025-02-23 15:33:00] 2025-02-23 14:30:51,347 | INFO     | mean x: 1740308394.5
[2025-02-23 15:33:00] 2025-02-23 14:30:51,347 | INFO     | mean y: 2379408.652173913
[2025-02-23 15:33:00] 2025-02-23 14:30:51,347 | INFO     | -- intersect: 2765175240.7087793
[2025-02-23 15:33:00] 2025-02-23 14:30:51,347 | INFO     | intersect: 2765175240.7087793
[2025-02-23 15:33:00] 2025-02-23 14:30:51,348 | INFO     | chi2: 0.9984463888971937
[2025-02-23 15:33:00] 2025-02-23 14:30:51,348 | INFO     | current chi2=0.9984463888971937 (change=58.82673795751694 %)
[2025-02-23 15:33:00] 2025-02-23 14:30:51,348 | INFO     | model: linear, x: [1740296103.0, 1740296164.0, 1740296225.0, 1740296286.0, 1740296347.0, 1740296408.0, 1740296469.0, 1740296530.0, 1740296591.0, 1740296652.0, 1740
[2025-02-23 15:33:00] 2025-02-23 14:30:51,349 | INFO     | sum of square deviations: 21215132660.0
[2025-02-23 15:33:00] 2025-02-23 14:30:51,353 | INFO     | sum of deviations: -51621157402.000015
[2025-02-23 15:33:00] 2025-02-23 14:30:51,353 | INFO     | mean x: 1740308547.0
[2025-02-23 15:33:00] 2025-02-23 14:30:51,353 | INFO     | mean y: 2382626.1662591686
[2025-02-23 15:33:00] 2025-02-23 14:30:51,353 | INFO     | -- intersect: 4236942120.6781797
[2025-02-23 15:33:00] 2025-02-23 14:30:51,353 | INFO     | intersect: 4236942120.6781797
[2025-02-23 15:33:00] 2025-02-23 14:30:51,354 | INFO     | chi2: 0.9010002971336929
[2025-02-23 15:33:00] 2025-02-23 14:30:51,354 | INFO     | current chi2=0.9010002971336929 (change=9.759772066593602 %)
[2025-02-23 15:33:00] 2025-02-23 14:30:51,354 | INFO     | left removable region: 30
[2025-02-23 15:33:00] 2025-02-23 14:30:51,354 | INFO     | model: linear, x: [1740297018.0, 1740297079.0, 1740297140.0, 1740297201.0, 1740297262.0, 1740297323.0, 1740297384.0, 1740297445.0, 1740297506.0, 1740297567.0, 1740
[2025-02-23 15:33:00] 2025-02-23 14:30:51,356 | INFO     | sum of square deviations: 18112179597.0
[2025-02-23 15:33:00] 2025-02-23 14:30:51,359 | INFO     | sum of deviations: -11009466751.500034
[2025-02-23 15:33:00] 2025-02-23 14:30:51,360 | INFO     | mean x: 1740308821.5
[2025-02-23 15:33:00] 2025-02-23 14:30:51,360 | INFO     | mean y: 2385060.157216495
[2025-02-23 15:33:00] 2025-02-23 14:30:51,360 | INFO     | -- intersect: 1060229700.2810365
[2025-02-23 15:33:00] 2025-02-23 14:30:51,360 | INFO     | intersect: 1060229700.2810365
[2025-02-23 15:33:00] 2025-02-23 14:30:51,361 | INFO     | chi2: 0.05733646900640697
[2025-02-23 15:33:00] 2025-02-23 14:30:51,361 | INFO     | -- intersect: 1060229700.2810365
[2025-02-23 15:33:00] 2025-02-23 14:30:51,361 | INFO     | current memory leak: -0.61 B/s (using 388 data points, chi2=0.06)
[2025-02-23 15:33:00] 2025-02-23 14:30:51,362 | INFO     | ..............................
[2025-02-23 15:33:00] 2025-02-23 14:30:51,362 | INFO     | . Timing measurements:
[2025-02-23 15:33:00] 2025-02-23 14:30:51,362 | INFO     | . get job = 0 s
[2025-02-23 15:33:00] 2025-02-23 14:30:51,362 | INFO     | . initial setup = 1 s
[2025-02-23 15:33:00] 2025-02-23 14:30:51,362 | INFO     | . payload setup = 6 s
[2025-02-23 15:33:00] 2025-02-23 14:30:51,362 | INFO     | . stage-in = 0 s
[2025-02-23 15:33:00] 2025-02-23 14:30:51,362 | INFO     | . payload execution = 25854 s
[2025-02-23 15:33:00] 2025-02-23 14:30:51,362 | INFO     | . stage-out = 1 s
[2025-02-23 15:33:00] 2025-02-23 14:30:51,363 | INFO     | . log creation = 0 s
[2025-02-23 15:33:00] 2025-02-23 14:30:51,363 | INFO     | ..............................
[2025-02-23 15:33:00] 2025-02-23 14:30:51,553 | INFO     | 
[2025-02-23 15:33:00] 2025-02-23 14:30:51,553 | INFO     | job summary report
[2025-02-23 15:33:00] 2025-02-23 14:30:51,553 | INFO     | --------------------------------------------------
[2025-02-23 15:33:00] 2025-02-23 14:30:51,553 | INFO     | PanDA job id: 6521839850
[2025-02-23 15:33:00] 2025-02-23 14:30:51,554 | INFO     | task id: 43205075
[2025-02-23 15:33:00] 2025-02-23 14:30:51,554 | INFO     | errors: (none)
[2025-02-23 15:33:00] 2025-02-23 14:30:51,554 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-23 15:33:00] 2025-02-23 14:30:51,554 | INFO     | pilot state: finished 
[2025-02-23 15:33:00] 2025-02-23 14:30:51,554 | INFO     | transexitcode: 0
[2025-02-23 15:33:00] 2025-02-23 14:30:51,554 | INFO     | exeerrorcode: 0
[2025-02-23 15:33:00] 2025-02-23 14:30:51,554 | INFO     | exeerrordiag: 
[2025-02-23 15:33:00] 2025-02-23 14:30:51,554 | INFO     | exitcode: 0
[2025-02-23 15:33:00] 2025-02-23 14:30:51,554 | INFO     | exitmsg: OK
[2025-02-23 15:33:00] 2025-02-23 14:30:51,554 | INFO     | cpuconsumptiontime: 97832 s
[2025-02-23 15:33:00] 2025-02-23 14:30:51,554 | INFO     | nevents: 400
[2025-02-23 15:33:00] 2025-02-23 14:30:51,554 | INFO     | neventsw: 0
[2025-02-23 15:33:00] 2025-02-23 14:30:51,554 | INFO     | pid: 1307343
[2025-02-23 15:33:00] 2025-02-23 14:30:51,554 | INFO     | pgrp: 1307343
[2025-02-23 15:33:00] 2025-02-23 14:30:51,554 | INFO     | corecount: 4
[2025-02-23 15:33:00] 2025-02-23 14:30:51,554 | INFO     | event service: False
[2025-02-23 15:33:00] 2025-02-23 14:30:51,554 | INFO     | sizes: {0: 2383102, 1: 2383357, 5: 2383563, 12: 2383619, 25864: 2419347, 25866: 2428310, 25868: 2428494, 25875: 2428664}
[2025-02-23 15:33:00] 2025-02-23 14:30:51,554 | INFO     | --------------------------------------------------
[2025-02-23 15:33:00] 2025-02-23 14:30:51,554 | INFO     | 
[2025-02-23 15:33:00] 2025-02-23 14:30:51,554 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2025-02-23 15:33:00] 2025-02-23 14:30:51,576 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-23 15:33:00] 2025-02-23 14:30:51,577 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-23 15:33:00] 2025-02-23 14:30:51,577 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-23 15:33:00] 2025-02-23 14:30:51,577 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-23 15:33:00] 2025-02-23 14:30:51,577 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-23 15:33:00] 2025-02-23 14:30:51,577 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-23 15:33:00] 2025-02-23 14:30:51,577 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-23 15:33:00] 2025-02-23 14:30:51,577 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-23 15:33:00] 2025-02-23 14:30:51,577 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-23 15:33:00] 2025-02-23 14:30:51,577 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-23 15:33:00] 2025-02-23 14:30:51,578 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-23 15:33:00] 2025-02-23 14:30:51,578 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-23 15:33:00] 2025-02-23 14:30:51,578 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-23 15:33:00] 2025-02-23 14:30:51,578 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-23 15:33:00] 2025-02-23 14:30:51,578 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-23 15:33:00] 2025-02-23 14:30:51,578 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-23 15:33:00] 2025-02-23 14:30:51,578 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-23 15:33:00] 2025-02-23 14:30:51,578 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-23 15:33:00] 2025-02-23 14:30:51,578 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-23 15:33:00] 2025-02-23 14:30:51,578 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-23 15:33:00] 2025-02-23 14:30:51,578 | INFO     | job 6521839850 has completed (purged errors)
[2025-02-23 15:33:00] 2025-02-23 14:30:51,579 | INFO     | overall cleanup function is called
[2025-02-23 15:33:00] 2025-02-23 14:30:52,590 | INFO     | --- collectZombieJob: --- 10, [1307343]
[2025-02-23 15:33:00] 2025-02-23 14:30:52,590 | INFO     | zombie collector waiting for pid 1307343
[2025-02-23 15:33:00] 2025-02-23 14:30:52,591 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-23 15:33:00] 2025-02-23 14:30:52,591 | INFO     | collected zombie processes
[2025-02-23 15:33:00] 2025-02-23 14:30:52,591 | INFO     | will attempt to kill all subprocesses of pid=1307343
[2025-02-23 15:33:00] 2025-02-23 14:30:52,768 | INFO     | process IDs to be killed: [1307343] (in reverse order)
[2025-02-23 15:33:00] 2025-02-23 14:30:52,891 | WARNING  | found no corresponding commands to process id(s)
[2025-02-23 15:33:00] 2025-02-23 14:30:52,891 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-23 15:33:00] 2025-02-23 14:30:52,903 | INFO     | did not find any defunct processes belonging to 1307343
[2025-02-23 15:33:00] 2025-02-23 14:30:52,915 | INFO     | did not find any defunct processes belonging to 1307343
[2025-02-23 15:33:00] 2025-02-23 14:30:52,916 | INFO     | ready for new job
[2025-02-23 15:33:00] 2025-02-23 14:30:52,916 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-23 15:33:00] 2025-02-23 14:30:52,919 | INFO     | **************************************
[2025-02-23 15:33:00] 2025-02-23 14:30:52,919 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-23 15:33:00] 2025-02-23 14:30:52,919 | INFO     | **************************************
[2025-02-23 15:33:00] 2025-02-23 14:30:52,919 | INFO     | 
[2025-02-23 15:33:00] 2025-02-23 14:30:52,923 | INFO     | architecture information:
[2025-02-23 15:33:00] 2025-02-23 14:30:52,923 | INFO     | executing command: cat /etc/os-release
[2025-02-23 15:33:00] 2025-02-23 14:30:52,944 | INFO     | cat /etc/os-release:
[2025-02-23 15:33:00] NAME="CentOS Linux"
[2025-02-23 15:33:00] VERSION="7 (Core)"
[2025-02-23 15:33:00] ID="centos"
[2025-02-23 15:33:00] ID_LIKE="rhel fedora"
[2025-02-23 15:33:00] VERSION_ID="7"
[2025-02-23 15:33:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-23 15:33:00] ANSI_COLOR="0;31"
[2025-02-23 15:33:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-23 15:33:00] HOME_URL="https://www.centos.org/"
[2025-02-23 15:33:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-23 15:33:00] 
[2025-02-23 15:33:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-23 15:33:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-23 15:33:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-23 15:33:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-23 15:33:00] 
[2025-02-23 15:33:00] 2025-02-23 14:30:52,945 | INFO     | **************************************
[2025-02-23 15:33:00] 2025-02-23 14:30:53,447 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2025-02-23 15:33:00] 2025-02-23 14:30:53,470 | INFO     | sufficient remaining disk space (614099582976 B)
[2025-02-23 15:33:00] 2025-02-23 14:30:53,470 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-23 15:33:00] 2025-02-23 14:30:53,471 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-23 15:33:00] 2025-02-23 14:30:53,471 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-23 15:33:00] 2025-02-23 14:30:53,471 | INFO     | aborting loop
[2025-02-23 15:33:00] 2025-02-23 14:30:53,471 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-23 15:33:00] 2025-02-23 14:30:53,472 | INFO     | found 0 job(s) in 20 queues
[2025-02-23 15:33:00] 2025-02-23 14:30:53,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-23 15:33:00] 2025-02-23 14:30:53,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-23 15:33:00] 2025-02-23 14:30:53,474 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-23 15:33:00] 2025-02-23 14:30:54,359 | INFO     | all data control threads have been joined
[2025-02-23 15:33:00] 2025-02-23 14:30:54,429 | INFO     | all job control threads have been joined
[2025-02-23 15:33:00] 2025-02-23 14:30:54,475 | INFO     | [job] retrieve thread has finished
[2025-02-23 15:33:00] 2025-02-23 14:30:54,476 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-23 15:33:00] 2025-02-23 14:30:54,476 | INFO     | [job] job monitor thread has finished
[2025-02-23 15:33:00] 2025-02-23 14:30:54,616 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-23 15:33:00] 2025-02-23 14:30:54,751 | INFO     | [job] create_data_payload thread has finished
[2025-02-23 15:33:00] 2025-02-23 14:30:54,754 | INFO     | [job] validate thread has finished
[2025-02-23 15:33:00] 2025-02-23 14:30:54,795 | INFO     | all payload control threads have been joined
[2025-02-23 15:33:00] 2025-02-23 14:30:54,930 | INFO     | [payload] validate_post thread has finished
[2025-02-23 15:33:00] 2025-02-23 14:30:55,364 | INFO     | [data] control thread has finished
[2025-02-23 15:33:00] 2025-02-23 14:30:55,434 | INFO     | [job] control thread has finished
[2025-02-23 15:33:00] 2025-02-23 14:30:55,479 | INFO     | [data] copytool_out thread has finished
[2025-02-23 15:33:00] 2025-02-23 14:30:55,481 | INFO     | [job] queue monitor thread has finished
[2025-02-23 15:33:00] 2025-02-23 14:30:55,489 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-23 15:33:00] 2025-02-23 14:30:55,527 | INFO     | [payload] execute_payloads thread has finished
[2025-02-23 15:33:00] 2025-02-23 14:30:55,675 | INFO     | [payload] validate_pre thread has finished
[2025-02-23 15:33:00] 2025-02-23 14:30:55,681 | INFO     | [data] copytool_in thread has finished
[2025-02-23 15:33:00] 2025-02-23 14:30:55,769 | INFO     | [payload] failed_post thread has finished
[2025-02-23 15:33:00] 2025-02-23 14:30:55,800 | INFO     | [payload] control thread has finished
[2025-02-23 15:33:00] 2025-02-23 14:30:59,494 | INFO     | [data] queue_monitor thread has finished
[2025-02-23 15:33:00] 2025-02-23 14:31:00,514 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22662723995456)>', '<ExcThread(monitor, started 22662489274112)>']
[2025-02-23 15:33:00] 2025-02-23 14:31:01,511 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-23 15:33:00] 2025-02-23 14:31:01,511 | INFO     | [monitor] control thread has ended
[2025-02-23 15:33:00] 2025-02-23 14:31:05,539 | INFO     | all workflow threads have been joined
[2025-02-23 15:33:00] 2025-02-23 14:31:05,539 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-23 15:33:00] 2025-02-23 14:31:05,540 | INFO     | traces error code: 0
[2025-02-23 15:33:00] 2025-02-23 14:31:05,540 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-23 15:33:00] 2025-02-23 14:31:05,727 [wrapper] ==== pilot stdout END ====
[2025-02-23 15:33:00] 2025-02-23 14:31:05,730 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-23 15:33:00] 2025-02-23 14:31:05,732 [wrapper] pilotpid: 1299884
[2025-02-23 15:33:00] 2025-02-23 14:31:05,735 [wrapper] Pilot exit status: 0
[2025-02-23 15:33:00] 2025-02-23 14:31:05,745 [wrapper] pandaids: 6521839850
[2025-02-23 15:33:00] 2025-02-23 14:31:05,816 [wrapper] cleanup supervisor_pilot 2132967 1299885
[2025-02-23 15:33:00] 2025-02-23 14:31:05,819 [wrapper] Test setup, not cleaning
[2025-02-23 15:33:00] 2025-02-23 14:31:05,825 [wrapper] apfmon messages muted
[2025-02-23 15:33:00] 2025-02-23 14:31:05,828 [wrapper] ==== wrapper stdout END ====
[2025-02-23 15:33:00] 2025-02-23 14:31:05,830 [wrapper] ==== wrapper stderr END ====
[2025-02-23 15:33:00]  *** Error codes and diagnostics ***
[2025-02-23 15:33:00]     "exeErrorCode": 0,
[2025-02-23 15:33:00]     "exeErrorDiag": "",
[2025-02-23 15:33:00]     "pilotErrorCode": 0,
[2025-02-23 15:33:00]     "pilotErrorDiag": "",
[2025-02-23 15:33:00]  *** Listing of results directory ***
[2025-02-23 15:33:00] total 664800
[2025-02-23 15:33:00] -rw-r--r-- 1 boinc boinc    491065 Feb 21 07:19 pilot3.tar.gz
[2025-02-23 15:33:00] -rw-r--r-- 1 boinc boinc      5118 Feb 21 07:37 queuedata.json
[2025-02-23 15:33:00] -rwx------ 1 boinc boinc     35865 Feb 21 07:38 runpilot2-wrapper.sh
[2025-02-23 15:33:00] -rw-r--r-- 1 boinc boinc       100 Feb 23 07:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-23 15:33:00] -rwxr-xr-x 1 boinc boinc      7986 Feb 23 07:24 run_atlas
[2025-02-23 15:33:00] -rw-r--r-- 1 boinc boinc       105 Feb 23 07:24 job.xml
[2025-02-23 15:33:00] -rw-r--r-- 2 boinc boinc 346371638 Feb 23 08:19 EVNT.43092757._001109.pool.root.1
[2025-02-23 15:33:00] -rw-r--r-- 1 boinc boinc      6636 Feb 23 08:19 init_data.xml
[2025-02-23 15:33:00] -rw-r--r-- 2 boinc boinc     17569 Feb 23 08:19 start_atlas.sh
[2025-02-23 15:33:00] drwxrwx--x 2 boinc boinc      4096 Feb 23 08:19 shared
[2025-02-23 15:33:00] -rw-r--r-- 2 boinc boinc    503557 Feb 23 08:19 input.tar.gz
[2025-02-23 15:33:00] -rw-r--r-- 1 boinc boinc         0 Feb 23 08:19 boinc_lockfile
[2025-02-23 15:33:00] -rw-r--r-- 1 boinc boinc      2555 Feb 23 08:19 pandaJob.out
[2025-02-23 15:33:00] -rw------- 1 boinc boinc       424 Feb 23 08:19 setup.sh.local
[2025-02-23 15:33:00] -rw------- 1 boinc boinc    987744 Feb 23 08:19 agis_schedconf.cvmfs.json
[2025-02-23 15:33:00] drwx------ 4 boinc boinc      4096 Feb 23 08:19 pilot3
[2025-02-23 15:33:00] -rw------- 1 boinc boinc 323734434 Feb 23 15:29 HITS.43205075._056684.pool.root.1
[2025-02-23 15:33:00] -rw-r--r-- 1 boinc boinc       530 Feb 23 15:30 boinc_task_state.xml
[2025-02-23 15:33:00] -rw------- 1 boinc boinc        95 Feb 23 15:30 pilot_heartbeat.json
[2025-02-23 15:33:00] -rw------- 1 boinc boinc      1036 Feb 23 15:30 memory_monitor_summary.json
[2025-02-23 15:33:00] -rw------- 1 boinc boinc   1582569 Feb 23 15:30 agis_ddmendpoints.agis.ALL.json
[2025-02-23 15:33:00] -rw------- 1 boinc boinc    492858 Feb 23 15:30 log.43205075._056684.job.log.tgz.1
[2025-02-23 15:33:00] -rw------- 1 boinc boinc      7742 Feb 23 15:30 heartbeat.json
[2025-02-23 15:33:00] -rw------- 1 boinc boinc      4348 Feb 23 15:31 pilotlog.txt
[2025-02-23 15:33:00] -rw------- 1 boinc boinc   2928189 Feb 23 15:31 log.43205075._056684.job.log.1
[2025-02-23 15:33:00] -rw------- 1 boinc boinc       357 Feb 23 15:31 output.list
[2025-02-23 15:33:00] -rw-r--r-- 1 boinc boinc       620 Feb 23 15:31 runtime_log
[2025-02-23 15:33:00] -rw------- 1 boinc boinc   3440640 Feb 23 15:31 result.tar.gz
[2025-02-23 15:33:00] -rw-r--r-- 1 boinc boinc     11424 Feb 23 15:31 runtime_log.err
[2025-02-23 15:33:00] -rw------- 1 boinc boinc       666 Feb 23 15:31 1rNNDmtqb56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQ0cKDmpy2FWm.diag
[2025-02-23 15:33:00] -rw-r--r-- 1 boinc boinc      8192 Feb 23 15:33 boinc_mmap_file
[2025-02-23 15:33:00] -rw-r--r-- 1 boinc boinc        27 Feb 23 15:33 wrapper_checkpoint.txt
[2025-02-23 15:33:00] -rw-r--r-- 1 boinc boinc     21356 Feb 23 15:33 stderr.txt
[2025-02-23 15:33:00] HITS file was successfully produced:
[2025-02-23 15:33:00] -rw------- 1 boinc boinc 323734434 Feb 23 15:29 shared/HITS.pool.root.1
[2025-02-23 15:33:00]  *** Contents of shared directory: ***
[2025-02-23 15:33:00] total 658284
[2025-02-23 15:33:00] -rw-r--r-- 2 boinc boinc 346371638 Feb 23 08:19 ATLAS.root_0
[2025-02-23 15:33:00] -rw-r--r-- 2 boinc boinc     17569 Feb 23 08:19 start_atlas.sh
[2025-02-23 15:33:00] -rw-r--r-- 2 boinc boinc    503557 Feb 23 08:19 input.tar.gz
[2025-02-23 15:33:00] -rw------- 1 boinc boinc 323734434 Feb 23 15:29 HITS.pool.root.1
[2025-02-23 15:33:00] -rw------- 1 boinc boinc   3440640 Feb 23 15:31 result.tar.gz
15:33:02 (1294174): run_atlas exited; CPU time 97935.029886
15:33:02 (1294174): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN