Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:44:50 (3203912): wrapper (7.7.26015): starting
06:44:50 (3203912): wrapper: running run_atlas (--nthreads 4)
[2025-02-24 06:44:50] Arguments: --nthreads 4
[2025-02-24 06:44:50] Threads: 4
[2025-02-24 06:44:50] Checking for CVMFS
[2025-02-24 06:44:50] No cvmfs_config command found, will try listing directly
[2025-02-24 06:44:50] CVMFS is ok
[2025-02-24 06:44:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-24 06:44:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-24 06:44:50] Further information can be found at the LHC@home message board.
[2025-02-24 06:44:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-24 06:44:50] Checking for apptainer binary...
[2025-02-24 06:44:50] which: no apptainer in ((null))
[2025-02-24 06:44:50] apptainer is not installed, using version from CVMFS
[2025-02-24 06:44:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-24 06:44:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-02-24 06:44:50] apptainer works
[2025-02-24 06:44:50] Set ATHENA_PROC_NUMBER=4
[2025-02-24 06:44:50] Set ATHENA_CORE_NUMBER=4
[2025-02-24 06:44:50] Starting ATLAS job with PandaID=6521753660
[2025-02-24 06:44:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-24 12:32:53]  *** The last 200 lines of the pilot log: ***
[2025-02-24 12:32:53] 2025-02-24 11:29:05,121 | INFO     | right removable region: 332
[2025-02-24 12:32:53] 2025-02-24 11:29:05,121 | INFO     | model: linear, x: [1740376240.0, 1740376301.0, 1740376362.0, 1740376423.0, 1740376484.0, 1740376545.0, 1740376606.0, 1740376667.0, 1740376728.0, 1740376789.0, 1740
[2025-02-24 12:32:53] 2025-02-24 11:29:05,121 | INFO     | sum of square deviations: 11450045382.0
[2025-02-24 12:32:53] 2025-02-24 11:29:05,124 | INFO     | sum of deviations: 66892369969.0
[2025-02-24 12:32:53] 2025-02-24 11:29:05,124 | INFO     | mean x: 1740386366.0
[2025-02-24 12:32:53] 2025-02-24 11:29:05,124 | INFO     | mean y: 2364565.09009009
[2025-02-24 12:32:53] 2025-02-24 11:29:05,124 | INFO     | -- intersect: -10165155719.719507
[2025-02-24 12:32:53] 2025-02-24 11:29:05,124 | INFO     | intersect: -10165155719.719507
[2025-02-24 12:32:53] 2025-02-24 11:29:05,124 | INFO     | chi2: 1.0383407449549833
[2025-02-24 12:32:53] 2025-02-24 11:29:05,125 | INFO     | current chi2=1.0383407449549833 (change=66.33866500449919 %)
[2025-02-24 12:32:53] 2025-02-24 11:29:05,125 | INFO     | model: linear, x: [1740376545.0, 1740376606.0, 1740376667.0, 1740376728.0, 1740376789.0, 1740376850.0, 1740376911.0, 1740376972.0, 1740377033.0, 1740377094.0, 1740
[2025-02-24 12:32:53] 2025-02-24 11:29:05,125 | INFO     | sum of square deviations: 10941980042.0
[2025-02-24 12:32:53] 2025-02-24 11:29:05,128 | INFO     | sum of deviations: 14100464271.999994
[2025-02-24 12:32:53] 2025-02-24 11:29:05,128 | INFO     | mean x: 1740386518.5
[2025-02-24 12:32:53] 2025-02-24 11:29:05,128 | INFO     | mean y: 2380413.6402439023
[2025-02-24 12:32:53] 2025-02-24 11:29:05,128 | INFO     | -- intersect: -2240381666.8409576
[2025-02-24 12:32:53] 2025-02-24 11:29:05,128 | INFO     | intersect: -2240381666.8409576
[2025-02-24 12:32:53] 2025-02-24 11:29:05,128 | INFO     | chi2: 0.07397512104793913
[2025-02-24 12:32:53] 2025-02-24 11:29:05,129 | INFO     | current chi2=0.07397512104793913 (change=92.87564112191838 %)
[2025-02-24 12:32:53] 2025-02-24 11:29:05,129 | INFO     | model: linear, x: [1740376850.0, 1740376911.0, 1740376972.0, 1740377033.0, 1740377094.0, 1740377155.0, 1740377216.0, 1740377277.0, 1740377338.0, 1740377399.0, 1740
[2025-02-24 12:32:53] 2025-02-24 11:29:05,131 | INFO     | sum of square deviations: 10449170802.0
[2025-02-24 12:32:53] 2025-02-24 11:29:05,133 | INFO     | sum of deviations: 4033113149.000001
[2025-02-24 12:32:53] 2025-02-24 11:29:05,133 | INFO     | mean x: 1740386671.0
[2025-02-24 12:32:53] 2025-02-24 11:29:05,133 | INFO     | mean y: 2383510.321981424
[2025-02-24 12:32:53] 2025-02-24 11:29:05,133 | INFO     | -- intersect: -669361310.4068508
[2025-02-24 12:32:53] 2025-02-24 11:29:05,134 | INFO     | intersect: -669361310.4068508
[2025-02-24 12:32:53] 2025-02-24 11:29:05,134 | INFO     | chi2: 0.015984585311481905
[2025-02-24 12:32:53] 2025-02-24 11:29:05,134 | INFO     | current chi2=0.015984585311481905 (change=78.39194436583186 %)
[2025-02-24 12:32:53] 2025-02-24 11:29:05,135 | INFO     | model: linear, x: [1740377155.0, 1740377216.0, 1740377277.0, 1740377338.0, 1740377399.0, 1740377460.0, 1740377521.0, 1740377582.0, 1740377643.0, 1740377704.0, 1740
[2025-02-24 12:32:53] 2025-02-24 11:29:05,135 | INFO     | sum of square deviations: 9971385099.5
[2025-02-24 12:32:53] 2025-02-24 11:29:05,137 | INFO     | sum of deviations: 5668011145.499998
[2025-02-24 12:32:53] 2025-02-24 11:29:05,137 | INFO     | mean x: 1740386823.5
[2025-02-24 12:32:53] 2025-02-24 11:29:05,138 | INFO     | mean y: 2382986.720125786
[2025-02-24 12:32:53] 2025-02-24 11:29:05,138 | INFO     | -- intersect: -986901030.9610265
[2025-02-24 12:32:53] 2025-02-24 11:29:05,138 | INFO     | intersect: -986901030.9610265
[2025-02-24 12:32:53] 2025-02-24 11:29:05,138 | INFO     | chi2: 0.01458385530306668
[2025-02-24 12:32:53] 2025-02-24 11:29:05,138 | INFO     | current chi2=0.01458385530306668 (change=8.763004989619997 %)
[2025-02-24 12:32:53] 2025-02-24 11:29:05,138 | INFO     | left removable region: 40
[2025-02-24 12:32:53] 2025-02-24 11:29:05,139 | INFO     | model: linear, x: [1740378375.0, 1740378436.0, 1740378497.0, 1740378558.0, 1740378619.0, 1740378680.0, 1740378741.0, 1740378802.0, 1740378863.0, 1740378924.0, 1740
[2025-02-24 12:32:53] 2025-02-24 11:29:05,139 | INFO     | sum of square deviations: 7720081493.0
[2025-02-24 12:32:53] 2025-02-24 11:29:05,141 | INFO     | sum of deviations: 10814694453.0
[2025-02-24 12:32:53] 2025-02-24 11:29:05,141 | INFO     | mean x: 1740387250.5
[2025-02-24 12:32:53] 2025-02-24 11:29:05,141 | INFO     | mean y: 2380917.883561644
[2025-02-24 12:32:53] 2025-02-24 11:29:05,141 | INFO     | -- intersect: -2435644686.0068183
[2025-02-24 12:32:53] 2025-02-24 11:29:05,141 | INFO     | intersect: -2435644686.0068183
[2025-02-24 12:32:53] 2025-02-24 11:29:05,142 | INFO     | chi2: 0.0004792850532544133
[2025-02-24 12:32:53] 2025-02-24 11:29:05,142 | INFO     | -- intersect: -2435644686.0068183
[2025-02-24 12:32:53] 2025-02-24 11:29:05,142 | INFO     | current memory leak: 1.40 B/s (using 292 data points, chi2=0.00)
[2025-02-24 12:32:53] 2025-02-24 11:29:05,143 | INFO     | ..............................
[2025-02-24 12:32:53] 2025-02-24 11:29:05,143 | INFO     | . Timing measurements:
[2025-02-24 12:32:53] 2025-02-24 11:29:05,143 | INFO     | . get job = 0 s
[2025-02-24 12:32:53] 2025-02-24 11:29:05,143 | INFO     | . initial setup = 1 s
[2025-02-24 12:32:53] 2025-02-24 11:29:05,143 | INFO     | . payload setup = 8 s
[2025-02-24 12:32:53] 2025-02-24 11:29:05,143 | INFO     | . stage-in = 0 s
[2025-02-24 12:32:53] 2025-02-24 11:29:05,143 | INFO     | . payload execution = 20604 s
[2025-02-24 12:32:53] 2025-02-24 11:29:05,143 | INFO     | . stage-out = 1 s
[2025-02-24 12:32:53] 2025-02-24 11:29:05,143 | INFO     | . log creation = 0 s
[2025-02-24 12:32:53] 2025-02-24 11:29:05,143 | INFO     | ..............................
[2025-02-24 12:32:53] 2025-02-24 11:29:05,236 | INFO     | 
[2025-02-24 12:32:53] 2025-02-24 11:29:05,237 | INFO     | job summary report
[2025-02-24 12:32:53] 2025-02-24 11:29:05,237 | INFO     | --------------------------------------------------
[2025-02-24 12:32:53] 2025-02-24 11:29:05,237 | INFO     | PanDA job id: 6521753660
[2025-02-24 12:32:53] 2025-02-24 11:29:05,237 | INFO     | task id: 43205094
[2025-02-24 12:32:53] 2025-02-24 11:29:05,237 | INFO     | errors: (none)
[2025-02-24 12:32:53] 2025-02-24 11:29:05,237 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-24 12:32:53] 2025-02-24 11:29:05,237 | INFO     | pilot state: finished 
[2025-02-24 12:32:53] 2025-02-24 11:29:05,237 | INFO     | transexitcode: 0
[2025-02-24 12:32:53] 2025-02-24 11:29:05,237 | INFO     | exeerrorcode: 0
[2025-02-24 12:32:53] 2025-02-24 11:29:05,237 | INFO     | exeerrordiag: 
[2025-02-24 12:32:53] 2025-02-24 11:29:05,237 | INFO     | exitcode: 0
[2025-02-24 12:32:53] 2025-02-24 11:29:05,237 | INFO     | exitmsg: OK
[2025-02-24 12:32:53] 2025-02-24 11:29:05,238 | INFO     | cpuconsumptiontime: 78427 s
[2025-02-24 12:32:53] 2025-02-24 11:29:05,238 | INFO     | nevents: 400
[2025-02-24 12:32:53] 2025-02-24 11:29:05,238 | INFO     | neventsw: 0
[2025-02-24 12:32:53] 2025-02-24 11:29:05,238 | INFO     | pid: 3215975
[2025-02-24 12:32:53] 2025-02-24 11:29:05,238 | INFO     | pgrp: 3215975
[2025-02-24 12:32:53] 2025-02-24 11:29:05,238 | INFO     | corecount: 4
[2025-02-24 12:32:53] 2025-02-24 11:29:05,238 | INFO     | event service: False
[2025-02-24 12:32:53] 2025-02-24 11:29:05,238 | INFO     | sizes: {0: 2383321, 7: 2383527, 11: 2383555, 20616: 2416512, 20618: 2425477, 20619: 2425533, 20625: 2425831}
[2025-02-24 12:32:53] 2025-02-24 11:29:05,238 | INFO     | --------------------------------------------------
[2025-02-24 12:32:53] 2025-02-24 11:29:05,238 | INFO     | 
[2025-02-24 12:32:53] 2025-02-24 11:29:05,238 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-02-24 12:32:53] 2025-02-24 11:29:05,264 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-24 12:32:53] 2025-02-24 11:29:05,264 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-24 12:32:53] 2025-02-24 11:29:05,264 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-24 12:32:53] 2025-02-24 11:29:05,264 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-24 12:32:53] 2025-02-24 11:29:05,264 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-24 12:32:53] 2025-02-24 11:29:05,264 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-24 12:32:53] 2025-02-24 11:29:05,265 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-24 12:32:53] 2025-02-24 11:29:05,265 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-24 12:32:53] 2025-02-24 11:29:05,265 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-24 12:32:53] 2025-02-24 11:29:05,265 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-24 12:32:53] 2025-02-24 11:29:05,265 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-24 12:32:53] 2025-02-24 11:29:05,265 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-24 12:32:53] 2025-02-24 11:29:05,265 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-24 12:32:53] 2025-02-24 11:29:05,265 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-24 12:32:53] 2025-02-24 11:29:05,265 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-24 12:32:53] 2025-02-24 11:29:05,265 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-24 12:32:53] 2025-02-24 11:29:05,265 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-24 12:32:53] 2025-02-24 11:29:05,265 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-24 12:32:53] 2025-02-24 11:29:05,265 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-24 12:32:53] 2025-02-24 11:29:05,266 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-24 12:32:53] 2025-02-24 11:29:05,266 | INFO     | job 6521753660 has completed (purged errors)
[2025-02-24 12:32:53] 2025-02-24 11:29:05,266 | INFO     | overall cleanup function is called
[2025-02-24 12:32:53] 2025-02-24 11:29:05,438 | WARNING  | process 3215975 can no longer be monitored (due to stat problems) - aborting
[2025-02-24 12:32:53] 2025-02-24 11:29:06,020 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-02-24 12:32:53] 2025-02-24 11:29:06,020 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-02-24 12:32:53] 2025-02-24 11:29:06,021 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6521753660/payload.stdout) since it has not been created yet
[2025-02-24 12:32:53] 2025-02-24 11:29:06,021 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-02-24 12:32:53] 2025-02-24 11:29:06,046 | INFO     | sufficient remaining disk space (3200501415936 B)
[2025-02-24 12:32:53] 2025-02-24 11:29:06,046 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-02-24 12:32:53] 2025-02-24 11:29:06,046 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6521753660/HITS.43205094._030519.pool.root.1 since it does not exist
[2025-02-24 12:32:53] 2025-02-24 11:29:06,275 | INFO     | --- collectZombieJob: --- 10, [3215975]
[2025-02-24 12:32:53] 2025-02-24 11:29:06,276 | INFO     | zombie collector waiting for pid 3215975
[2025-02-24 12:32:53] 2025-02-24 11:29:06,276 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-24 12:32:53] 2025-02-24 11:29:06,276 | INFO     | collected zombie processes
[2025-02-24 12:32:53] 2025-02-24 11:29:06,276 | INFO     | will attempt to kill all subprocesses of pid=3215975
[2025-02-24 12:32:53] 2025-02-24 11:29:06,402 | INFO     | number of running child processes to parent process 3215975: 1
[2025-02-24 12:32:53] 2025-02-24 11:29:06,402 | INFO     | maximum number of monitored processes: 6
[2025-02-24 12:32:53] 2025-02-24 11:29:06,402 | INFO     | aborting job monitoring since job object (job id=6521753660) has expired
[2025-02-24 12:32:53] 2025-02-24 11:29:06,626 | INFO     | process IDs to be killed: [3215975] (in reverse order)
[2025-02-24 12:32:53] 2025-02-24 11:29:06,852 | WARNING  | found no corresponding commands to process id(s)
[2025-02-24 12:32:53] 2025-02-24 11:29:06,852 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-24 12:32:53] 2025-02-24 11:29:06,878 | INFO     | did not find any defunct processes belonging to 3215975
[2025-02-24 12:32:53] 2025-02-24 11:29:06,900 | INFO     | did not find any defunct processes belonging to 3215975
[2025-02-24 12:32:53] 2025-02-24 11:29:06,900 | INFO     | ready for new job
[2025-02-24 12:32:53] 2025-02-24 11:29:06,900 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-24 12:32:53] 2025-02-24 11:29:06,903 | INFO     | **************************************
[2025-02-24 12:32:53] 2025-02-24 11:29:06,904 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-24 12:32:53] 2025-02-24 11:29:06,904 | INFO     | **************************************
[2025-02-24 12:32:53] 2025-02-24 11:29:06,904 | INFO     | 
[2025-02-24 12:32:53] 2025-02-24 11:29:06,912 | INFO     | architecture information:
[2025-02-24 12:32:53] 2025-02-24 11:29:06,915 | INFO     | executing command: cat /etc/os-release
[2025-02-24 12:32:53] 2025-02-24 11:29:06,936 | INFO     | cat /etc/os-release:
[2025-02-24 12:32:53] NAME="CentOS Linux"
[2025-02-24 12:32:53] VERSION="7 (Core)"
[2025-02-24 12:32:53] ID="centos"
[2025-02-24 12:32:53] ID_LIKE="rhel fedora"
[2025-02-24 12:32:53] VERSION_ID="7"
[2025-02-24 12:32:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-24 12:32:53] ANSI_COLOR="0;31"
[2025-02-24 12:32:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-24 12:32:53] HOME_URL="https://www.centos.org/"
[2025-02-24 12:32:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-24 12:32:53] 
[2025-02-24 12:32:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-24 12:32:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-24 12:32:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-24 12:32:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-24 12:32:53] 
[2025-02-24 12:32:53] 2025-02-24 11:29:06,936 | INFO     | **************************************
[2025-02-24 12:32:53] 2025-02-24 11:29:07,439 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-02-24 12:32:53] 2025-02-24 11:29:07,463 | INFO     | sufficient remaining disk space (3200503513088 B)
[2025-02-24 12:32:53] 2025-02-24 11:29:07,463 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-24 12:32:53] 2025-02-24 11:29:07,463 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-24 12:32:53] 2025-02-24 11:29:07,464 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-24 12:32:53] 2025-02-24 11:29:07,464 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-24 12:32:53] 2025-02-24 11:29:07,464 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-24 12:32:53] 2025-02-24 11:29:07,465 | INFO     | found 0 job(s) in 20 queues
[2025-02-24 12:32:53] 2025-02-24 11:29:07,465 | INFO     | aborting loop
[2025-02-24 12:32:53] 2025-02-24 11:29:07,465 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-24 12:32:53] 2025-02-24 11:29:07,466 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-24 12:32:53] 2025-02-24 11:29:08,002 | INFO     | all payload control threads have been joined
[2025-02-24 12:32:53] 2025-02-24 11:29:08,100 | INFO     | all job control threads have been joined
[2025-02-24 12:32:53] 2025-02-24 11:29:08,300 | INFO     | all data control threads have been joined
[2025-02-24 12:32:53] 2025-02-24 11:29:08,469 | INFO     | [job] retrieve thread has finished
[2025-02-24 12:32:53] 2025-02-24 11:29:08,469 | INFO     | [job] job monitor thread has finished
[2025-02-24 12:32:53] 2025-02-24 11:29:08,470 | INFO     | [payload] failed_post thread has finished
[2025-02-24 12:32:53] 2025-02-24 11:29:08,489 | INFO     | [payload] validate_post thread has finished
[2025-02-24 12:32:53] 2025-02-24 11:29:09,006 | INFO     | [payload] control thread has finished
[2025-02-24 12:32:53] 2025-02-24 11:29:09,105 | INFO     | [job] control thread has finished
[2025-02-24 12:32:53] 2025-02-24 11:29:09,216 | INFO     | [payload] execute_payloads thread has finished
[2025-02-24 12:32:53] 2025-02-24 11:29:09,217 | INFO     | [job] validate thread has finished
[2025-02-24 12:32:53] 2025-02-24 11:29:09,306 | INFO     | [data] control thread has finished
[2025-02-24 12:32:53] 2025-02-24 11:29:09,463 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-24 12:32:53] 2025-02-24 11:29:09,470 | INFO     | [data] copytool_out thread has finished
[2025-02-24 12:32:53] 2025-02-24 11:29:09,558 | INFO     | [data] copytool_in thread has finished
[2025-02-24 12:32:53] 2025-02-24 11:29:09,583 | INFO     | [job] create_data_payload thread has finished
[2025-02-24 12:32:53] 2025-02-24 11:29:09,670 | INFO     | [payload] validate_pre thread has finished
[2025-02-24 12:32:53] 2025-02-24 11:29:09,803 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-24 12:32:53] 2025-02-24 11:29:10,246 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-24 12:32:53] 2025-02-24 11:29:11,252 | INFO     | [job] queue monitor thread has finished
[2025-02-24 12:32:53] 2025-02-24 11:29:13,470 | INFO     | [data] queue_monitor thread has finished
[2025-02-24 12:32:53] 2025-02-24 11:29:14,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22904849614656)>', '<ExcThread(monitor, started 22904615962368)>']
[2025-02-24 12:32:53] 2025-02-24 11:29:15,499 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-24 12:32:53] 2025-02-24 11:29:15,500 | INFO     | [monitor] control thread has ended
[2025-02-24 12:32:53] 2025-02-24 11:29:19,951 | INFO     | all workflow threads have been joined
[2025-02-24 12:32:53] 2025-02-24 11:29:19,952 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-24 12:32:53] 2025-02-24 11:29:19,952 | INFO     | traces error code: 0
[2025-02-24 12:32:53] 2025-02-24 11:29:19,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-24 12:32:53] 2025-02-24 11:29:20,090 [wrapper] ==== pilot stdout END ====
[2025-02-24 12:32:53] 2025-02-24 11:29:20,094 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-24 12:32:53] 2025-02-24 11:29:20,098 [wrapper] pilotpid: 3207877
[2025-02-24 12:32:53] 2025-02-24 11:29:20,101 [wrapper] Pilot exit status: 0
[2025-02-24 12:32:53] 2025-02-24 11:29:20,115 [wrapper] pandaids: 6521753660
[2025-02-24 12:32:53] 2025-02-24 11:29:20,275 [wrapper] cleanup supervisor_pilot   39861 3207878
[2025-02-24 12:32:53] 2025-02-24 11:29:20,278 [wrapper] Test setup, not cleaning
[2025-02-24 12:32:53] 2025-02-24 11:29:20,285 [wrapper] apfmon messages muted
[2025-02-24 12:32:53] 2025-02-24 11:29:20,289 [wrapper] ==== wrapper stdout END ====
[2025-02-24 12:32:53] 2025-02-24 11:29:20,293 [wrapper] ==== wrapper stderr END ====
[2025-02-24 12:32:53]  *** Error codes and diagnostics ***
[2025-02-24 12:32:53]     "exeErrorCode": 0,
[2025-02-24 12:32:53]     "exeErrorDiag": "",
[2025-02-24 12:32:53]     "pilotErrorCode": 0,
[2025-02-24 12:32:53]     "pilotErrorDiag": "",
[2025-02-24 12:32:53]  *** Listing of results directory ***
[2025-02-24 12:32:53] total 662964
[2025-02-24 12:32:53] -rw-r--r-- 1 boinc boinc    491065 Feb 21 05:34 pilot3.tar.gz
[2025-02-24 12:32:53] -rwx------ 1 boinc boinc     35865 Feb 21 05:51 runpilot2-wrapper.sh
[2025-02-24 12:32:53] -rw-r--r-- 1 boinc boinc      5118 Feb 21 05:51 queuedata.json
[2025-02-24 12:32:53] -rw-r--r-- 1 boinc boinc       100 Feb 24 06:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-24 12:32:53] -rwxr-xr-x 1 boinc boinc      7986 Feb 24 06:44 run_atlas
[2025-02-24 12:32:53] -rw-r--r-- 1 boinc boinc       105 Feb 24 06:44 job.xml
[2025-02-24 12:32:53] -rw-r--r-- 2 boinc boinc 342773043 Feb 24 06:44 EVNT.43092757._001958.pool.root.1
[2025-02-24 12:32:53] -rw-r--r-- 1 boinc boinc      6678 Feb 24 06:44 init_data.xml
[2025-02-24 12:32:53] drwxrwx--x 2 boinc boinc      4096 Feb 24 06:44 shared
[2025-02-24 12:32:53] -rw-r--r-- 2 boinc boinc    503551 Feb 24 06:44 input.tar.gz
[2025-02-24 12:32:53] -rw-r--r-- 2 boinc boinc     17569 Feb 24 06:44 start_atlas.sh
[2025-02-24 12:32:53] -rw-r--r-- 1 boinc boinc         0 Feb 24 06:44 boinc_lockfile
[2025-02-24 12:32:53] -rw-r--r-- 1 boinc boinc      2547 Feb 24 06:44 pandaJob.out
[2025-02-24 12:32:53] -rw------- 1 boinc boinc       424 Feb 24 06:44 setup.sh.local
[2025-02-24 12:32:53] -rw------- 1 boinc boinc    987712 Feb 24 06:45 agis_schedconf.cvmfs.json
[2025-02-24 12:32:53] drwx------ 4 boinc boinc      4096 Feb 24 06:45 pilot3
[2025-02-24 12:32:53] -rw------- 1 boinc boinc 326975303 Feb 24 12:28 HITS.43205094._030519.pool.root.1
[2025-02-24 12:32:53] -rw-r--r-- 1 boinc boinc       530 Feb 24 12:28 boinc_task_state.xml
[2025-02-24 12:32:53] -rw------- 1 boinc boinc      1044 Feb 24 12:28 memory_monitor_summary.json
[2025-02-24 12:32:53] -rw------- 1 boinc boinc   1582569 Feb 24 12:28 agis_ddmendpoints.agis.ALL.json
[2025-02-24 12:32:53] -rw------- 1 boinc boinc    437206 Feb 24 12:28 log.43205094._030519.job.log.tgz.1
[2025-02-24 12:32:53] -rw------- 1 boinc boinc        95 Feb 24 12:29 pilot_heartbeat.json
[2025-02-24 12:32:53] -rw------- 1 boinc boinc      7704 Feb 24 12:29 heartbeat.json
[2025-02-24 12:32:53] -rw------- 1 boinc boinc      4350 Feb 24 12:29 pilotlog.txt
[2025-02-24 12:32:53] -rw------- 1 boinc boinc   2223324 Feb 24 12:29 log.43205094._030519.job.log.1
[2025-02-24 12:32:53] -rw------- 1 boinc boinc       357 Feb 24 12:29 output.list
[2025-02-24 12:32:53] -rw-r--r-- 1 boinc boinc       620 Feb 24 12:29 runtime_log
[2025-02-24 12:32:53] -rw------- 1 boinc boinc   2682880 Feb 24 12:29 result.tar.gz
[2025-02-24 12:32:53] -rw-r--r-- 1 boinc boinc     11443 Feb 24 12:29 runtime_log.err
[2025-02-24 12:32:53] -rw------- 1 boinc boinc       666 Feb 24 12:29 rF1NDm2Ba56n9Rq4apOajLDm4fhM0noT9bVoFjIUDm3scKDm0bjV9m.diag
[2025-02-24 12:32:53] -rw-r--r-- 1 boinc boinc        27 Feb 24 12:32 wrapper_checkpoint.txt
[2025-02-24 12:32:53] -rw-r--r-- 1 boinc boinc      8192 Feb 24 12:32 boinc_mmap_file
[2025-02-24 12:32:53] -rw-r--r-- 1 boinc boinc     21789 Feb 24 12:32 stderr.txt
[2025-02-24 12:32:53] HITS file was successfully produced:
[2025-02-24 12:32:53] -rw------- 1 boinc boinc 326975303 Feb 24 12:28 shared/HITS.pool.root.1
[2025-02-24 12:32:53]  *** Contents of shared directory: ***
[2025-02-24 12:32:53] total 657192
[2025-02-24 12:32:53] -rw-r--r-- 2 boinc boinc 342773043 Feb 24 06:44 ATLAS.root_0
[2025-02-24 12:32:53] -rw-r--r-- 2 boinc boinc    503551 Feb 24 06:44 input.tar.gz
[2025-02-24 12:32:53] -rw-r--r-- 2 boinc boinc     17569 Feb 24 06:44 start_atlas.sh
[2025-02-24 12:32:53] -rw------- 1 boinc boinc 326975303 Feb 24 12:28 HITS.pool.root.1
[2025-02-24 12:32:53] -rw------- 1 boinc boinc   2682880 Feb 24 12:29 result.tar.gz
12:32:54 (3203912): run_atlas exited; CPU time 78098.538599
12:32:54 (3203912): called boinc_finish(0)

</stderr_txt>
]]>

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