Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:19:28 (1434037): wrapper (7.7.26015): starting
05:19:28 (1434037): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 05:19:28] Arguments: --nthreads 4
[2025-02-22 05:19:28] Threads: 4
[2025-02-22 05:19:28] Checking for CVMFS
[2025-02-22 05:19:28] No cvmfs_config command found, will try listing directly
[2025-02-22 05:19:28] CVMFS is ok
[2025-02-22 05:19:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 05:19:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 05:19:28] Further information can be found at the LHC@home message board.
[2025-02-22 05:19:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 05:19:28] Checking for apptainer binary...
[2025-02-22 05:19:28] which: no apptainer in ((null))
[2025-02-22 05:19:28] apptainer is not installed, using version from CVMFS
[2025-02-22 05:19:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 05:19:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment ugluk10.grid.cesnet.cz
[2025-02-22 05:19:28] apptainer works
[2025-02-22 05:19:28] Set ATHENA_PROC_NUMBER=4
[2025-02-22 05:19:28] Set ATHENA_CORE_NUMBER=4
[2025-02-22 05:19:28] Starting ATLAS job with PandaID=6521686825
[2025-02-22 05:19:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
06:18:46 (1506415): wrapper (7.7.26015): starting
06:18:46 (1506415): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 06:18:46] Arguments: --nthreads 4
[2025-02-22 06:18:46] Threads: 4
[2025-02-22 06:18:46] This job has been restarted, cleaning up previous attempt
[2025-02-22 06:18:46] Checking for CVMFS
[2025-02-22 06:18:46] No cvmfs_config command found, will try listing directly
[2025-02-22 06:18:46] CVMFS is ok
[2025-02-22 06:18:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 06:18:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 06:18:46] Further information can be found at the LHC@home message board.
[2025-02-22 06:18:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 06:18:46] Checking for apptainer binary...
[2025-02-22 06:18:46] which: no apptainer in ((null))
[2025-02-22 06:18:46] apptainer is not installed, using version from CVMFS
[2025-02-22 06:18:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 06:18:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment ugluk10.grid.cesnet.cz
[2025-02-22 06:18:46] apptainer works
[2025-02-22 06:18:46] Set ATHENA_PROC_NUMBER=4
[2025-02-22 06:18:46] Set ATHENA_CORE_NUMBER=4
[2025-02-22 06:18:46] Starting ATLAS job with PandaID=6521686825
[2025-02-22 06:18:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 13:50:18]  *** The last 200 lines of the pilot log: ***
[2025-02-22 13:50:18] 2025-02-22 12:49:58,050 | INFO     | fitting pss+swap vs Time
[2025-02-22 13:50:18] 2025-02-22 12:49:58,051 | INFO     | model: linear, x: [1740201558.0, 1740201619.0, 1740201680.0, 1740201741.0, 1740201802.0, 1740201863.0, 1740201924.0, 1740201985.0, 1740202046.0, 1740202107.0, 1740
[2025-02-22 13:50:18] 2025-02-22 12:49:58,051 | INFO     | sum of square deviations: 27140955395.0
[2025-02-22 13:50:18] 2025-02-22 12:49:58,057 | INFO     | sum of deviations: 165896285304.50003
[2025-02-22 13:50:18] 2025-02-22 12:49:58,057 | INFO     | mean x: 1740215069.5
[2025-02-22 13:50:18] 2025-02-22 12:49:58,057 | INFO     | mean y: 2355154.3175675673
[2025-02-22 13:50:18] 2025-02-22 12:49:58,057 | INFO     | -- intersect: -10634529636.928461
[2025-02-22 13:50:18] 2025-02-22 12:49:58,057 | INFO     | intersect: -10634529636.928461
[2025-02-22 13:50:18] 2025-02-22 12:49:58,058 | INFO     | chi2: 4.666832402950895
[2025-02-22 13:50:18] 2025-02-22 12:49:58,059 | INFO     | model: linear, x: [1740201558.0, 1740201619.0, 1740201680.0, 1740201741.0, 1740201802.0, 1740201863.0, 1740201924.0, 1740201985.0, 1740202046.0, 1740202107.0, 1740
[2025-02-22 13:50:18] 2025-02-22 12:49:58,059 | INFO     | sum of square deviations: 26234315140.0
[2025-02-22 13:50:18] 2025-02-22 12:49:58,064 | INFO     | sum of deviations: 190164841498.0
[2025-02-22 13:50:18] 2025-02-22 12:49:58,065 | INFO     | mean x: 1740214917.0
[2025-02-22 13:50:18] 2025-02-22 12:49:58,065 | INFO     | mean y: 2359196.1617312073
[2025-02-22 13:50:18] 2025-02-22 12:49:58,065 | INFO     | -- intersect: -12611947375.126953
[2025-02-22 13:50:18] 2025-02-22 12:49:58,065 | INFO     | intersect: -12611947375.126953
[2025-02-22 13:50:18] 2025-02-22 12:49:58,066 | INFO     | chi2: 4.005942721987459
[2025-02-22 13:50:18] 2025-02-22 12:49:58,066 | INFO     | current chi2=4.005942721987459 (change=14.161418793302868 %)
[2025-02-22 13:50:18] 2025-02-22 12:49:58,066 | INFO     | right removable region: 438
[2025-02-22 13:50:18] 2025-02-22 12:49:58,067 | INFO     | model: linear, x: [1740201863.0, 1740201924.0, 1740201985.0, 1740202046.0, 1740202107.0, 1740202168.0, 1740202229.0, 1740202290.0, 1740202351.0, 1740202412.0, 1740
[2025-02-22 13:50:18] 2025-02-22 12:49:58,067 | INFO     | sum of square deviations: 26234315140.0
[2025-02-22 13:50:18] 2025-02-22 12:49:58,072 | INFO     | sum of deviations: 61087304298.000015
[2025-02-22 13:50:18] 2025-02-22 12:49:58,072 | INFO     | mean x: 1740215222.0
[2025-02-22 13:50:18] 2025-02-22 12:49:58,072 | INFO     | mean y: 2372760.833712984
[2025-02-22 13:50:18] 2025-02-22 12:49:58,073 | INFO     | -- intersect: -4049764916.213558
[2025-02-22 13:50:18] 2025-02-22 12:49:58,073 | INFO     | intersect: -4049764916.213558
[2025-02-22 13:50:18] 2025-02-22 12:49:58,073 | INFO     | chi2: 2.2645487941195475
[2025-02-22 13:50:18] 2025-02-22 12:49:58,074 | INFO     | current chi2=2.2645487941195475 (change=51.47567774905211 %)
[2025-02-22 13:50:18] 2025-02-22 12:49:58,074 | INFO     | model: linear, x: [1740202168.0, 1740202229.0, 1740202290.0, 1740202351.0, 1740202412.0, 1740202473.0, 1740202534.0, 1740202595.0, 1740202656.0, 1740202717.0, 1740
[2025-02-22 13:50:18] 2025-02-22 12:49:58,075 | INFO     | sum of square deviations: 25348093872.5
[2025-02-22 13:50:18] 2025-02-22 12:49:58,080 | INFO     | sum of deviations: -22105806043.000004
[2025-02-22 13:50:18] 2025-02-22 12:49:58,080 | INFO     | mean x: 1740215374.5
[2025-02-22 13:50:18] 2025-02-22 12:49:58,080 | INFO     | mean y: 2387076.3594470047
[2025-02-22 13:50:18] 2025-02-22 12:49:58,080 | INFO     | -- intersect: 1520010600.0547833
[2025-02-22 13:50:18] 2025-02-22 12:49:58,080 | INFO     | intersect: 1520010600.0547833
[2025-02-22 13:50:18] 2025-02-22 12:49:58,081 | INFO     | chi2: 0.8714581484605459
[2025-02-22 13:50:18] 2025-02-22 12:49:58,081 | INFO     | current chi2=0.8714581484605459 (change=61.5173605124562 %)
[2025-02-22 13:50:18] 2025-02-22 12:49:58,082 | INFO     | model: linear, x: [1740202473.0, 1740202534.0, 1740202595.0, 1740202656.0, 1740202717.0, 1740202778.0, 1740202839.0, 1740202900.0, 1740202961.0, 1740203022.0, 1740
[2025-02-22 13:50:18] 2025-02-22 12:49:58,082 | INFO     | sum of square deviations: 24482059030.0
[2025-02-22 13:50:18] 2025-02-22 12:49:58,087 | INFO     | sum of deviations: -42951513065.0
[2025-02-22 13:50:18] 2025-02-22 12:49:58,087 | INFO     | mean x: 1740215527.0
[2025-02-22 13:50:18] 2025-02-22 12:49:58,087 | INFO     | mean y: 2390736.1515151514
[2025-02-22 13:50:18] 2025-02-22 12:49:58,088 | INFO     | -- intersect: 3055438269.950242
[2025-02-22 13:50:18] 2025-02-22 12:49:58,088 | INFO     | intersect: 3055438269.950242
[2025-02-22 13:50:18] 2025-02-22 12:49:58,088 | INFO     | chi2: 0.7586886269076942
[2025-02-22 13:50:18] 2025-02-22 12:49:58,089 | INFO     | current chi2=0.7586886269076942 (change=12.940325562628804 %)
[2025-02-22 13:50:18] 2025-02-22 12:49:58,089 | INFO     | left removable region: 30
[2025-02-22 13:50:18] 2025-02-22 12:49:58,089 | INFO     | model: linear, x: [1740203388.0, 1740203449.0, 1740203510.0, 1740203571.0, 1740203632.0, 1740203693.0, 1740203754.0, 1740203815.0, 1740203876.0, 1740203937.0, 1740
[2025-02-22 13:50:18] 2025-02-22 12:49:58,090 | INFO     | sum of square deviations: 21059899982.0
[2025-02-22 13:50:18] 2025-02-22 12:49:58,094 | INFO     | sum of deviations: -23279257919.0
[2025-02-22 13:50:18] 2025-02-22 12:49:58,094 | INFO     | mean x: 1740215801.5
[2025-02-22 13:50:18] 2025-02-22 12:49:58,095 | INFO     | mean y: 2396479.7352941176
[2025-02-22 13:50:18] 2025-02-22 12:49:58,095 | INFO     | -- intersect: 1926001649.3924482
[2025-02-22 13:50:18] 2025-02-22 12:49:58,095 | INFO     | intersect: 1926001649.3924482
[2025-02-22 13:50:18] 2025-02-22 12:49:58,096 | INFO     | chi2: 0.06777409249527076
[2025-02-22 13:50:18] 2025-02-22 12:49:58,096 | INFO     | -- intersect: 1926001649.3924482
[2025-02-22 13:50:18] 2025-02-22 12:49:58,096 | INFO     | current memory leak: -1.11 B/s (using 408 data points, chi2=0.07)
[2025-02-22 13:50:18] 2025-02-22 12:49:58,097 | INFO     | ..............................
[2025-02-22 13:50:18] 2025-02-22 12:49:58,097 | INFO     | . Timing measurements:
[2025-02-22 13:50:18] 2025-02-22 12:49:58,097 | INFO     | . get job = 0 s
[2025-02-22 13:50:18] 2025-02-22 12:49:58,097 | INFO     | . initial setup = 1 s
[2025-02-22 13:50:18] 2025-02-22 12:49:58,097 | INFO     | . payload setup = 5 s
[2025-02-22 13:50:18] 2025-02-22 12:49:58,097 | INFO     | . stage-in = 0 s
[2025-02-22 13:50:18] 2025-02-22 12:49:58,097 | INFO     | . payload execution = 27030 s
[2025-02-22 13:50:18] 2025-02-22 12:49:58,098 | INFO     | . stage-out = 1 s
[2025-02-22 13:50:18] 2025-02-22 12:49:58,098 | INFO     | . log creation = 0 s
[2025-02-22 13:50:18] 2025-02-22 12:49:58,098 | INFO     | ..............................
[2025-02-22 13:50:18] 2025-02-22 12:49:58,509 | INFO     | 
[2025-02-22 13:50:18] 2025-02-22 12:49:58,509 | INFO     | job summary report
[2025-02-22 13:50:18] 2025-02-22 12:49:58,509 | INFO     | --------------------------------------------------
[2025-02-22 13:50:18] 2025-02-22 12:49:58,509 | INFO     | PanDA job id: 6521686825
[2025-02-22 13:50:18] 2025-02-22 12:49:58,509 | INFO     | task id: 43205094
[2025-02-22 13:50:18] 2025-02-22 12:49:58,510 | INFO     | errors: (none)
[2025-02-22 13:50:18] 2025-02-22 12:49:58,510 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 13:50:18] 2025-02-22 12:49:58,510 | INFO     | pilot state: finished 
[2025-02-22 13:50:18] 2025-02-22 12:49:58,510 | INFO     | transexitcode: 0
[2025-02-22 13:50:18] 2025-02-22 12:49:58,510 | INFO     | exeerrorcode: 0
[2025-02-22 13:50:18] 2025-02-22 12:49:58,510 | INFO     | exeerrordiag: 
[2025-02-22 13:50:18] 2025-02-22 12:49:58,510 | INFO     | exitcode: 0
[2025-02-22 13:50:18] 2025-02-22 12:49:58,510 | INFO     | exitmsg: OK
[2025-02-22 13:50:18] 2025-02-22 12:49:58,511 | INFO     | cpuconsumptiontime: 102656 s
[2025-02-22 13:50:18] 2025-02-22 12:49:58,511 | INFO     | nevents: 400
[2025-02-22 13:50:18] 2025-02-22 12:49:58,511 | INFO     | neventsw: 0
[2025-02-22 13:50:18] 2025-02-22 12:49:58,511 | INFO     | pid: 1516697
[2025-02-22 13:50:18] 2025-02-22 12:49:58,511 | INFO     | pgrp: 1516697
[2025-02-22 13:50:18] 2025-02-22 12:49:58,511 | INFO     | corecount: 4
[2025-02-22 13:50:18] 2025-02-22 12:49:58,511 | INFO     | event service: False
[2025-02-22 13:50:18] 2025-02-22 12:49:58,511 | INFO     | sizes: {0: 2383143, 1: 2383398, 5: 2383604, 12: 2383660, 27038: 2419898, 27041: 2428889, 27043: 2429073, 27049: 2429243}
[2025-02-22 13:50:18] 2025-02-22 12:49:58,511 | INFO     | --------------------------------------------------
[2025-02-22 13:50:18] 2025-02-22 12:49:58,512 | INFO     | 
[2025-02-22 13:50:18] 2025-02-22 12:49:58,512 | INFO     | executing command: ls -lF /scratch/boinc/var/slot12/slots/0
[2025-02-22 13:50:18] 2025-02-22 12:49:58,529 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 13:50:18] 2025-02-22 12:49:58,530 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 13:50:18] 2025-02-22 12:49:58,530 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 13:50:18] 2025-02-22 12:49:58,530 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 13:50:18] 2025-02-22 12:49:58,530 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 13:50:18] 2025-02-22 12:49:58,530 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 13:50:18] 2025-02-22 12:49:58,530 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 13:50:18] 2025-02-22 12:49:58,531 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 13:50:18] 2025-02-22 12:49:58,531 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 13:50:18] 2025-02-22 12:49:58,531 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 13:50:18] 2025-02-22 12:49:58,531 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 13:50:18] 2025-02-22 12:49:58,531 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 13:50:18] 2025-02-22 12:49:58,531 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 13:50:18] 2025-02-22 12:49:58,531 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 13:50:18] 2025-02-22 12:49:58,531 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 13:50:18] 2025-02-22 12:49:58,532 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 13:50:18] 2025-02-22 12:49:58,532 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 13:50:18] 2025-02-22 12:49:58,532 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 13:50:18] 2025-02-22 12:49:58,532 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 13:50:18] 2025-02-22 12:49:58,532 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 13:50:18] 2025-02-22 12:49:58,532 | INFO     | job 6521686825 has completed (purged errors)
[2025-02-22 13:50:18] 2025-02-22 12:49:58,533 | INFO     | overall cleanup function is called
[2025-02-22 13:50:18] 2025-02-22 12:49:59,540 | INFO     | --- collectZombieJob: --- 10, [1516697]
[2025-02-22 13:50:18] 2025-02-22 12:49:59,541 | INFO     | zombie collector waiting for pid 1516697
[2025-02-22 13:50:18] 2025-02-22 12:49:59,541 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 13:50:18] 2025-02-22 12:49:59,541 | INFO     | collected zombie processes
[2025-02-22 13:50:18] 2025-02-22 12:49:59,541 | INFO     | will attempt to kill all subprocesses of pid=1516697
[2025-02-22 13:50:18] 2025-02-22 12:49:59,633 | INFO     | process IDs to be killed: [1516697] (in reverse order)
[2025-02-22 13:50:18] 2025-02-22 12:49:59,702 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 13:50:18] 2025-02-22 12:49:59,702 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 13:50:18] 2025-02-22 12:49:59,708 | INFO     | did not find any defunct processes belonging to 1516697
[2025-02-22 13:50:18] 2025-02-22 12:49:59,713 | INFO     | did not find any defunct processes belonging to 1516697
[2025-02-22 13:50:18] 2025-02-22 12:49:59,713 | INFO     | ready for new job
[2025-02-22 13:50:18] 2025-02-22 12:49:59,713 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 13:50:18] 2025-02-22 12:49:59,715 | INFO     | **************************************
[2025-02-22 13:50:18] 2025-02-22 12:49:59,716 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 13:50:18] 2025-02-22 12:49:59,716 | INFO     | **************************************
[2025-02-22 13:50:18] 2025-02-22 12:49:59,716 | INFO     | 
[2025-02-22 13:50:18] 2025-02-22 12:49:59,718 | INFO     | architecture information:
[2025-02-22 13:50:18] 2025-02-22 12:49:59,718 | INFO     | executing command: cat /etc/os-release
[2025-02-22 13:50:18] 2025-02-22 12:49:59,731 | INFO     | cat /etc/os-release:
[2025-02-22 13:50:18] NAME="CentOS Linux"
[2025-02-22 13:50:18] VERSION="7 (Core)"
[2025-02-22 13:50:18] ID="centos"
[2025-02-22 13:50:18] ID_LIKE="rhel fedora"
[2025-02-22 13:50:18] VERSION_ID="7"
[2025-02-22 13:50:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 13:50:18] ANSI_COLOR="0;31"
[2025-02-22 13:50:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 13:50:18] HOME_URL="https://www.centos.org/"
[2025-02-22 13:50:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 13:50:18] 
[2025-02-22 13:50:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 13:50:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 13:50:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 13:50:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 13:50:18] 
[2025-02-22 13:50:18] 2025-02-22 12:49:59,731 | INFO     | **************************************
[2025-02-22 13:50:18] 2025-02-22 12:50:00,234 | INFO     | executing command: df -mP /scratch/boinc/var/slot12/slots/0
[2025-02-22 13:50:18] 2025-02-22 12:50:00,246 | INFO     | sufficient remaining disk space (3471650586624 B)
[2025-02-22 13:50:18] 2025-02-22 12:50:00,247 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 13:50:18] 2025-02-22 12:50:00,247 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 13:50:18] 2025-02-22 12:50:00,297 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-22 13:50:18] 2025-02-22 12:50:00,297 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-22 13:50:18] 2025-02-22 12:50:00,297 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 13:50:18] 2025-02-22 12:50:00,297 | INFO     | will abort loop
[2025-02-22 13:50:18] 2025-02-22 12:50:00,306 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 13:50:18] 2025-02-22 12:50:00,306 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 13:50:18] 2025-02-22 12:50:00,306 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 13:50:18] 2025-02-22 12:50:00,429 | INFO     | all data control threads have been joined
[2025-02-22 13:50:18] 2025-02-22 12:50:00,438 | INFO     | all job control threads have been joined
[2025-02-22 13:50:18] 2025-02-22 12:50:00,451 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 13:50:18] 2025-02-22 12:50:00,841 | INFO     | all payload control threads have been joined
[2025-02-22 13:50:18] 2025-02-22 12:50:01,252 | INFO     | [job] retrieve thread has finished
[2025-02-22 13:50:18] 2025-02-22 12:50:01,299 | INFO     | [job] job monitor thread has finished
[2025-02-22 13:50:18] 2025-02-22 12:50:01,435 | INFO     | [data] control thread has finished
[2025-02-22 13:50:18] 2025-02-22 12:50:01,442 | INFO     | [job] control thread has finished
[2025-02-22 13:50:18] 2025-02-22 12:50:01,503 | INFO     | [payload] failed_post thread has finished
[2025-02-22 13:50:18] 2025-02-22 12:50:01,504 | INFO     | [payload] validate_post thread has finished
[2025-02-22 13:50:18] 2025-02-22 12:50:01,504 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 13:50:18] 2025-02-22 12:50:01,846 | INFO     | [payload] control thread has finished
[2025-02-22 13:50:18] 2025-02-22 12:50:02,068 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 13:50:18] 2025-02-22 12:50:02,198 | INFO     | [data] copytool_in thread has finished
[2025-02-22 13:50:18] 2025-02-22 12:50:02,310 | INFO     | [job] validate thread has finished
[2025-02-22 13:50:18] 2025-02-22 12:50:02,399 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 13:50:18] 2025-02-22 12:50:02,441 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 13:50:18] 2025-02-22 12:50:02,460 | INFO     | [data] copytool_out thread has finished
[2025-02-22 13:50:18] 2025-02-22 12:50:03,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 13:50:18] 2025-02-22 12:50:04,224 | INFO     | [job] queue monitor thread has finished
[2025-02-22 13:50:18] 2025-02-22 12:50:06,401 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 13:50:18] 2025-02-22 12:50:11,231 | INFO     | job.realtimelogging is not enabled
[2025-02-22 13:50:18] 2025-02-22 12:50:12,237 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 13:50:18] 2025-02-22 12:50:13,523 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22763052308288)>', '<ExcThread(monitor, started 22762819118848)>']
[2025-02-22 13:50:18] 2025-02-22 12:50:14,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 13:50:18] 2025-02-22 12:50:14,358 | INFO     | [monitor] control thread has ended
[2025-02-22 13:50:18] 2025-02-22 12:50:18,548 | INFO     | all workflow threads have been joined
[2025-02-22 13:50:18] 2025-02-22 12:50:18,548 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 13:50:18] 2025-02-22 12:50:18,549 | INFO     | traces error code: 0
[2025-02-22 13:50:18] 2025-02-22 12:50:18,549 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 13:50:18] 2025-02-22 12:50:18,665 [wrapper] ==== pilot stdout END ====
[2025-02-22 13:50:18] 2025-02-22 12:50:18,667 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 13:50:18] 2025-02-22 12:50:18,669 [wrapper] pilotpid: 1509978
[2025-02-22 13:50:18] 2025-02-22 12:50:18,672 [wrapper] Pilot exit status: 0
[2025-02-22 13:50:18] 2025-02-22 12:50:18,681 [wrapper] pandaids: 6521686825 6521686825
[2025-02-22 13:50:18] 2025-02-22 12:50:18,716 [wrapper] cleanup supervisor_pilot 2248575 1509979
[2025-02-22 13:50:18] 2025-02-22 12:50:18,719 [wrapper] Test setup, not cleaning
[2025-02-22 13:50:18] 2025-02-22 12:50:18,723 [wrapper] apfmon messages muted
[2025-02-22 13:50:18] 2025-02-22 12:50:18,726 [wrapper] ==== wrapper stdout END ====
[2025-02-22 13:50:18] 2025-02-22 12:50:18,728 [wrapper] ==== wrapper stderr END ====
[2025-02-22 13:50:18]  *** Error codes and diagnostics ***
[2025-02-22 13:50:18]     "exeErrorCode": 0,
[2025-02-22 13:50:18]     "exeErrorDiag": "",
[2025-02-22 13:50:18]     "pilotErrorCode": 0,
[2025-02-22 13:50:18]     "pilotErrorDiag": "",
[2025-02-22 13:50:18]  *** Listing of results directory ***
[2025-02-22 13:50:18] total 999304
[2025-02-22 13:50:18] drwx------ 4 boinc boinc      4096 Dec 18 12:03 pilot3
[2025-02-22 13:50:18] -rw-r--r-- 1 boinc boinc    491065 Feb 21 03:25 pilot3.tar.gz
[2025-02-22 13:50:18] -rwx------ 1 boinc boinc     35865 Feb 21 03:43 runpilot2-wrapper.sh
[2025-02-22 13:50:18] -rw-r--r-- 1 boinc boinc      5118 Feb 21 03:43 queuedata.json
[2025-02-22 13:50:18] -rw-r--r-- 1 boinc boinc       100 Feb 22 05:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 13:50:18] -rwxr-xr-x 1 boinc boinc      7986 Feb 22 05:19 run_atlas
[2025-02-22 13:50:18] -rw-r--r-- 1 boinc boinc       105 Feb 22 05:19 job.xml
[2025-02-22 13:50:18] -rw-r--r-- 3 boinc boinc 345428389 Feb 22 05:19 EVNT.43092757._001918.pool.root.1
[2025-02-22 13:50:18] -rw-r--r-- 3 boinc boinc 345428389 Feb 22 05:19 ATLAS.root_0
[2025-02-22 13:50:18] drwxrwx--x 2 boinc boinc      4096 Feb 22 05:19 shared
[2025-02-22 13:50:18] -rw-r--r-- 2 boinc boinc    503551 Feb 22 05:19 input.tar.gz
[2025-02-22 13:50:18] -rw-r--r-- 2 boinc boinc     17569 Feb 22 05:19 start_atlas.sh
[2025-02-22 13:50:18] -rw-r--r-- 1 boinc boinc         0 Feb 22 05:19 boinc_lockfile
[2025-02-22 13:50:18] -rw-r--r-- 1 boinc boinc      2547 Feb 22 06:18 pandaJob.out
[2025-02-22 13:50:18] -rw------- 1 boinc boinc       424 Feb 22 06:18 setup.sh.local
[2025-02-22 13:50:18] -rw------- 1 boinc boinc    987689 Feb 22 06:18 agis_schedconf.cvmfs.json
[2025-02-22 13:50:18] -rw-r--r-- 1 boinc boinc      6423 Feb 22 06:19 init_data.xml
[2025-02-22 13:50:18] -rw------- 1 boinc boinc 321460668 Feb 22 13:48 HITS.43205094._029381.pool.root.1
[2025-02-22 13:50:18] -rw-r--r-- 1 boinc boinc       533 Feb 22 13:48 boinc_task_state.xml
[2025-02-22 13:50:18] -rw------- 1 boinc boinc        97 Feb 22 13:49 pilot_heartbeat.json
[2025-02-22 13:50:18] -rw------- 1 boinc boinc      1033 Feb 22 13:49 memory_monitor_summary.json
[2025-02-22 13:50:18] -rw------- 1 boinc boinc   1582569 Feb 22 13:49 agis_ddmendpoints.agis.ALL.json
[2025-02-22 13:50:18] -rw------- 1 boinc boinc    492938 Feb 22 13:49 log.43205094._029381.job.log.tgz.1
[2025-02-22 13:50:18] -rw------- 1 boinc boinc      7757 Feb 22 13:49 heartbeat.json
[2025-02-22 13:50:18] -rw-r--r-- 1 boinc boinc      8192 Feb 22 13:49 boinc_mmap_file
[2025-02-22 13:50:18] -rw-r--r-- 1 boinc boinc        29 Feb 22 13:49 wrapper_checkpoint.txt
[2025-02-22 13:50:18] -rw------- 1 boinc boinc      4484 Feb 22 13:50 pilotlog.txt
[2025-02-22 13:50:18] -rw------- 1 boinc boinc   3080466 Feb 22 13:50 log.43205094._029381.job.log.1
[2025-02-22 13:50:18] -rw------- 1 boinc boinc       357 Feb 22 13:50 output.list
[2025-02-22 13:50:18] -rw-r--r-- 1 boinc boinc       620 Feb 22 13:50 runtime_log
[2025-02-22 13:50:18] -rw------- 1 boinc boinc   3594240 Feb 22 13:50 result.tar.gz
[2025-02-22 13:50:18] -rw------- 1 boinc boinc       791 Feb 22 13:50 vhhLDmjBY56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmMmcKDmdBrfKn.diag
[2025-02-22 13:50:18] -rw-r--r-- 1 boinc boinc     11496 Feb 22 13:50 runtime_log.err
[2025-02-22 13:50:18] -rw-r--r-- 1 boinc boinc     23235 Feb 22 13:50 stderr.txt
[2025-02-22 13:50:18] HITS file was successfully produced:
[2025-02-22 13:50:18] -rw------- 1 boinc boinc 321460668 Feb 22 13:48 shared/HITS.pool.root.1
[2025-02-22 13:50:18]  *** Contents of shared directory: ***
[2025-02-22 13:50:18] total 655296
[2025-02-22 13:50:18] -rw-r--r-- 3 boinc boinc 345428389 Feb 22 05:19 ATLAS.root_0
[2025-02-22 13:50:18] -rw-r--r-- 2 boinc boinc    503551 Feb 22 05:19 input.tar.gz
[2025-02-22 13:50:18] -rw-r--r-- 2 boinc boinc     17569 Feb 22 05:19 start_atlas.sh
[2025-02-22 13:50:18] -rw------- 1 boinc boinc 321460668 Feb 22 13:48 HITS.pool.root.1
[2025-02-22 13:50:18] -rw------- 1 boinc boinc   3594240 Feb 22 13:50 result.tar.gz
13:50:20 (1506415): run_atlas exited; CPU time 102746.806343
13:50:20 (1506415): called boinc_finish(0)

</stderr_txt>
]]>

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