Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:33:21 (1800724): wrapper (7.7.26015): starting
09:33:21 (1800724): wrapper: running run_atlas (--nthreads 4)
[2025-02-23 09:33:21] Arguments: --nthreads 4
[2025-02-23 09:33:21] Threads: 4
[2025-02-23 09:33:21] Checking for CVMFS
[2025-02-23 09:33:21] No cvmfs_config command found, will try listing directly
[2025-02-23 09:33:21] CVMFS is ok
[2025-02-23 09:33:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 09:33:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 09:33:21] Further information can be found at the LHC@home message board.
[2025-02-23 09:33:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 09:33:21] Checking for apptainer binary...
[2025-02-23 09:33:21] which: no apptainer in ((null))
[2025-02-23 09:33:21] apptainer is not installed, using version from CVMFS
[2025-02-23 09:33:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 09:33:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-02-23 09:33:21] apptainer works
[2025-02-23 09:33:21] Set ATHENA_PROC_NUMBER=4
[2025-02-23 09:33:21] Set ATHENA_CORE_NUMBER=4
[2025-02-23 09:33:21] Starting ATLAS job with PandaID=6521466914
[2025-02-23 09:33:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-23 16:32:45]  *** The last 200 lines of the pilot log: ***
[2025-02-23 16:32:45] 2025-02-23 15:28:06,119 | INFO     | mean x: 1740312055.5
[2025-02-23 16:32:45] 2025-02-23 15:28:06,119 | INFO     | mean y: 2364557.9534313725
[2025-02-23 16:32:45] 2025-02-23 15:28:06,119 | INFO     | -- intersect: -6476385953.17684
[2025-02-23 16:32:45] 2025-02-23 15:28:06,119 | INFO     | intersect: -6476385953.17684
[2025-02-23 16:32:45] 2025-02-23 15:28:06,120 | INFO     | chi2: 4.916484583587855
[2025-02-23 16:32:45] 2025-02-23 15:28:06,120 | INFO     | model: linear, x: [1740299642.0, 1740299703.0, 1740299764.0, 1740299825.0, 1740299886.0, 1740299947.0, 1740300008.0, 1740300069.0, 1740300130.0, 1740300191.0, 1740
[2025-02-23 16:32:45] 2025-02-23 15:28:06,121 | INFO     | sum of square deviations: 20295085642.0
[2025-02-23 16:32:45] 2025-02-23 15:28:06,125 | INFO     | sum of deviations: 100936625885.0
[2025-02-23 16:32:45] 2025-02-23 15:28:06,125 | INFO     | mean x: 1740311903.0
[2025-02-23 16:32:45] 2025-02-23 15:28:06,125 | INFO     | mean y: 2369003.7791563277
[2025-02-23 16:32:45] 2025-02-23 15:28:06,125 | INFO     | -- intersect: -8652987991.256056
[2025-02-23 16:32:45] 2025-02-23 15:28:06,125 | INFO     | intersect: -8652987991.256056
[2025-02-23 16:32:45] 2025-02-23 15:28:06,126 | INFO     | chi2: 4.268082966725433
[2025-02-23 16:32:45] 2025-02-23 15:28:06,131 | INFO     | current chi2=4.268082966725433 (change=13.188317909648454 %)
[2025-02-23 16:32:45] 2025-02-23 15:28:06,132 | INFO     | right removable region: 402
[2025-02-23 16:32:45] 2025-02-23 15:28:06,133 | INFO     | model: linear, x: [1740299947.0, 1740300008.0, 1740300069.0, 1740300130.0, 1740300191.0, 1740300252.0, 1740300313.0, 1740300374.0, 1740300435.0, 1740300496.0, 1740
[2025-02-23 16:32:45] 2025-02-23 15:28:06,134 | INFO     | sum of square deviations: 20295085642.0
[2025-02-23 16:32:45] 2025-02-23 15:28:06,139 | INFO     | sum of deviations: -16814509029.000011
[2025-02-23 16:32:45] 2025-02-23 15:28:06,139 | INFO     | mean x: 1740312208.0
[2025-02-23 16:32:45] 2025-02-23 15:28:06,139 | INFO     | mean y: 2383512.1042183624
[2025-02-23 16:32:45] 2025-02-23 15:28:06,139 | INFO     | -- intersect: 1444234798.217404
[2025-02-23 16:32:45] 2025-02-23 15:28:06,139 | INFO     | intersect: 1444234798.217404
[2025-02-23 16:32:45] 2025-02-23 15:28:06,140 | INFO     | chi2: 2.5048858576246786
[2025-02-23 16:32:45] 2025-02-23 15:28:06,140 | INFO     | current chi2=2.5048858576246786 (change=49.051282170466756 %)
[2025-02-23 16:32:45] 2025-02-23 15:28:06,141 | INFO     | model: linear, x: [1740300252.0, 1740300313.0, 1740300374.0, 1740300435.0, 1740300496.0, 1740300557.0, 1740300618.0, 1740300679.0, 1740300740.0, 1740300801.0, 1740
[2025-02-23 16:32:45] 2025-02-23 15:28:06,141 | INFO     | sum of square deviations: 19549015839.5
[2025-02-23 16:32:45] 2025-02-23 15:28:06,145 | INFO     | sum of deviations: -90148349616.99997
[2025-02-23 16:32:45] 2025-02-23 15:28:06,145 | INFO     | mean x: 1740312360.5
[2025-02-23 16:32:45] 2025-02-23 15:28:06,145 | INFO     | mean y: 2398501.9095477387
[2025-02-23 16:32:45] 2025-02-23 15:28:06,146 | INFO     | -- intersect: 8027676521.283905
[2025-02-23 16:32:45] 2025-02-23 15:28:06,146 | INFO     | intersect: 8027676521.283905
[2025-02-23 16:32:45] 2025-02-23 15:28:06,146 | INFO     | chi2: 1.1719124374153198
[2025-02-23 16:32:45] 2025-02-23 15:28:06,146 | INFO     | current chi2=1.1719124374153198 (change=53.21493656694539 %)
[2025-02-23 16:32:45] 2025-02-23 15:28:06,147 | INFO     | model: linear, x: [1740300557.0, 1740300618.0, 1740300679.0, 1740300740.0, 1740300801.0, 1740300862.0, 1740300923.0, 1740300984.0, 1740301045.0, 1740301106.0, 1740
[2025-02-23 16:32:45] 2025-02-23 15:28:06,147 | INFO     | sum of square deviations: 18821458012.0
[2025-02-23 16:32:45] 2025-02-23 15:28:06,151 | INFO     | sum of deviations: -104199794289.0
[2025-02-23 16:32:45] 2025-02-23 15:28:06,151 | INFO     | mean x: 1740312513.0
[2025-02-23 16:32:45] 2025-02-23 15:28:06,151 | INFO     | mean y: 2401432.5216284986
[2025-02-23 16:32:45] 2025-02-23 15:28:06,151 | INFO     | -- intersect: 9637160107.304184
[2025-02-23 16:32:45] 2025-02-23 15:28:06,151 | INFO     | intersect: 9637160107.304184
[2025-02-23 16:32:45] 2025-02-23 15:28:06,152 | INFO     | chi2: 1.0767149818238595
[2025-02-23 16:32:45] 2025-02-23 15:28:06,152 | INFO     | current chi2=1.0767149818238595 (change=8.123256700084225 %)
[2025-02-23 16:32:45] 2025-02-23 15:28:06,152 | INFO     | left removable region: 30
[2025-02-23 16:32:45] 2025-02-23 15:28:06,153 | INFO     | model: linear, x: [1740301472.0, 1740301533.0, 1740301594.0, 1740301655.0, 1740301716.0, 1740301777.0, 1740301838.0, 1740301899.0, 1740301960.0, 1740302021.0, 1740
[2025-02-23 16:32:45] 2025-02-23 15:28:06,153 | INFO     | sum of square deviations: 15962617433.0
[2025-02-23 16:32:45] 2025-02-23 15:28:06,156 | INFO     | sum of deviations: -38164778832.00002
[2025-02-23 16:32:45] 2025-02-23 15:28:06,156 | INFO     | mean x: 1740312787.5
[2025-02-23 16:32:45] 2025-02-23 15:28:06,157 | INFO     | mean y: 2396886.4139784947
[2025-02-23 16:32:45] 2025-02-23 15:28:06,157 | INFO     | -- intersect: 4163284216.5914006
[2025-02-23 16:32:45] 2025-02-23 15:28:06,157 | INFO     | intersect: 4163284216.5914006
[2025-02-23 16:32:45] 2025-02-23 15:28:06,157 | INFO     | chi2: 0.26486878353190185
[2025-02-23 16:32:45] 2025-02-23 15:28:06,158 | INFO     | -- intersect: 4163284216.5914006
[2025-02-23 16:32:45] 2025-02-23 15:28:06,158 | INFO     | current memory leak: -2.39 B/s (using 372 data points, chi2=0.26)
[2025-02-23 16:32:45] 2025-02-23 15:28:06,159 | INFO     | ..............................
[2025-02-23 16:32:45] 2025-02-23 15:28:06,159 | INFO     | . Timing measurements:
[2025-02-23 16:32:45] 2025-02-23 15:28:06,160 | INFO     | . get job = 0 s
[2025-02-23 16:32:45] 2025-02-23 15:28:06,160 | INFO     | . initial setup = 1 s
[2025-02-23 16:32:45] 2025-02-23 15:28:06,160 | INFO     | . payload setup = 6 s
[2025-02-23 16:32:45] 2025-02-23 15:28:06,160 | INFO     | . stage-in = 0 s
[2025-02-23 16:32:45] 2025-02-23 15:28:06,160 | INFO     | . payload execution = 24838 s
[2025-02-23 16:32:45] 2025-02-23 15:28:06,160 | INFO     | . stage-out = 1 s
[2025-02-23 16:32:45] 2025-02-23 15:28:06,160 | INFO     | . log creation = 0 s
[2025-02-23 16:32:45] 2025-02-23 15:28:06,160 | INFO     | ..............................
[2025-02-23 16:32:45] 2025-02-23 15:28:06,279 | INFO     | 
[2025-02-23 16:32:45] 2025-02-23 15:28:06,280 | INFO     | job summary report
[2025-02-23 16:32:45] 2025-02-23 15:28:06,280 | INFO     | --------------------------------------------------
[2025-02-23 16:32:45] 2025-02-23 15:28:06,280 | INFO     | PanDA job id: 6521466914
[2025-02-23 16:32:45] 2025-02-23 15:28:06,280 | INFO     | task id: 43078919
[2025-02-23 16:32:45] 2025-02-23 15:28:06,280 | INFO     | errors: (none)
[2025-02-23 16:32:45] 2025-02-23 15:28:06,280 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-23 16:32:45] 2025-02-23 15:28:06,280 | INFO     | pilot state: finished 
[2025-02-23 16:32:45] 2025-02-23 15:28:06,280 | INFO     | transexitcode: 0
[2025-02-23 16:32:45] 2025-02-23 15:28:06,280 | INFO     | exeerrorcode: 0
[2025-02-23 16:32:45] 2025-02-23 15:28:06,281 | INFO     | exeerrordiag: 
[2025-02-23 16:32:45] 2025-02-23 15:28:06,281 | INFO     | exitcode: 0
[2025-02-23 16:32:45] 2025-02-23 15:28:06,281 | INFO     | exitmsg: OK
[2025-02-23 16:32:45] 2025-02-23 15:28:06,281 | INFO     | cpuconsumptiontime: 95050 s
[2025-02-23 16:32:45] 2025-02-23 15:28:06,281 | INFO     | nevents: 400
[2025-02-23 16:32:45] 2025-02-23 15:28:06,281 | INFO     | neventsw: 0
[2025-02-23 16:32:45] 2025-02-23 15:28:06,281 | INFO     | pid: 1811392
[2025-02-23 16:32:45] 2025-02-23 15:28:06,281 | INFO     | pgrp: 1811392
[2025-02-23 16:32:45] 2025-02-23 15:28:06,281 | INFO     | corecount: 4
[2025-02-23 16:32:45] 2025-02-23 15:28:06,281 | INFO     | event service: False
[2025-02-23 16:32:45] 2025-02-23 15:28:06,281 | INFO     | sizes: {0: 2383257, 1: 2383399, 6: 2383605, 11: 2383633, 24848: 2418599, 24850: 2427562, 24851: 2427746, 24858: 2427916}
[2025-02-23 16:32:45] 2025-02-23 15:28:06,281 | INFO     | --------------------------------------------------
[2025-02-23 16:32:45] 2025-02-23 15:28:06,282 | INFO     | 
[2025-02-23 16:32:45] 2025-02-23 15:28:06,282 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-02-23 16:32:45] 2025-02-23 15:28:06,298 | WARNING  | process 1811392 can no longer be monitored (due to stat problems) - aborting
[2025-02-23 16:32:45] 2025-02-23 15:28:06,299 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6521466914/memory_monitor_summary.json (trf name=prmon)
[2025-02-23 16:32:45] 2025-02-23 15:28:06,307 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-23 16:32:45] 2025-02-23 15:28:06,308 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-23 16:32:45] 2025-02-23 15:28:06,308 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-23 16:32:45] 2025-02-23 15:28:06,308 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-23 16:32:45] 2025-02-23 15:28:06,308 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-23 16:32:45] 2025-02-23 15:28:06,309 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-23 16:32:45] 2025-02-23 15:28:06,309 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-23 16:32:45] 2025-02-23 15:28:06,309 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-23 16:32:45] 2025-02-23 15:28:06,309 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-23 16:32:45] 2025-02-23 15:28:06,309 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-23 16:32:45] 2025-02-23 15:28:06,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-23 16:32:45] 2025-02-23 15:28:06,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-23 16:32:45] 2025-02-23 15:28:06,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-23 16:32:45] 2025-02-23 15:28:06,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-23 16:32:45] 2025-02-23 15:28:06,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-23 16:32:45] 2025-02-23 15:28:06,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-23 16:32:45] 2025-02-23 15:28:06,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-23 16:32:45] 2025-02-23 15:28:06,310 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-23 16:32:45] 2025-02-23 15:28:06,310 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-23 16:32:45] 2025-02-23 15:28:06,310 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-23 16:32:45] 2025-02-23 15:28:06,310 | INFO     | job 6521466914 has completed (purged errors)
[2025-02-23 16:32:45] 2025-02-23 15:28:06,310 | INFO     | overall cleanup function is called
[2025-02-23 16:32:45] 2025-02-23 15:28:06,455 | INFO     | number of running child processes to parent process 1811392: 1
[2025-02-23 16:32:45] 2025-02-23 15:28:06,456 | INFO     | maximum number of monitored processes: 6
[2025-02-23 16:32:45] 2025-02-23 15:28:06,456 | INFO     | aborting job monitoring since job object (job id=6521466914) has expired
[2025-02-23 16:32:45] 2025-02-23 15:28:06,734 | INFO     | PID=1804432 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-23 16:32:45] 2025-02-23 15:28:06,734 | INFO     | .. there are 11 such processes running
[2025-02-23 16:32:45] 2025-02-23 15:28:07,323 | INFO     | --- collectZombieJob: --- 10, [1811392]
[2025-02-23 16:32:45] 2025-02-23 15:28:07,323 | INFO     | zombie collector waiting for pid 1811392
[2025-02-23 16:32:45] 2025-02-23 15:28:07,323 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-23 16:32:45] 2025-02-23 15:28:07,323 | INFO     | collected zombie processes
[2025-02-23 16:32:45] 2025-02-23 15:28:07,323 | INFO     | will attempt to kill all subprocesses of pid=1811392
[2025-02-23 16:32:45] 2025-02-23 15:28:07,482 | INFO     | process IDs to be killed: [1811392] (in reverse order)
[2025-02-23 16:32:45] 2025-02-23 15:28:07,590 | WARNING  | found no corresponding commands to process id(s)
[2025-02-23 16:32:45] 2025-02-23 15:28:07,590 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-23 16:32:45] 2025-02-23 15:28:07,601 | INFO     | did not find any defunct processes belonging to 1811392
[2025-02-23 16:32:45] 2025-02-23 15:28:07,611 | INFO     | did not find any defunct processes belonging to 1811392
[2025-02-23 16:32:45] 2025-02-23 15:28:07,611 | INFO     | ready for new job
[2025-02-23 16:32:45] 2025-02-23 15:28:07,612 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-23 16:32:45] 2025-02-23 15:28:07,614 | INFO     | **************************************
[2025-02-23 16:32:45] 2025-02-23 15:28:07,614 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-23 16:32:45] 2025-02-23 15:28:07,614 | INFO     | **************************************
[2025-02-23 16:32:45] 2025-02-23 15:28:07,614 | INFO     | 
[2025-02-23 16:32:45] 2025-02-23 15:28:07,618 | INFO     | architecture information:
[2025-02-23 16:32:45] 2025-02-23 15:28:07,618 | INFO     | executing command: cat /etc/os-release
[2025-02-23 16:32:45] 2025-02-23 15:28:07,632 | INFO     | cat /etc/os-release:
[2025-02-23 16:32:45] NAME="CentOS Linux"
[2025-02-23 16:32:45] VERSION="7 (Core)"
[2025-02-23 16:32:45] ID="centos"
[2025-02-23 16:32:45] ID_LIKE="rhel fedora"
[2025-02-23 16:32:45] VERSION_ID="7"
[2025-02-23 16:32:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-23 16:32:45] ANSI_COLOR="0;31"
[2025-02-23 16:32:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-23 16:32:45] HOME_URL="https://www.centos.org/"
[2025-02-23 16:32:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-23 16:32:45] 
[2025-02-23 16:32:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-23 16:32:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-23 16:32:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-23 16:32:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-23 16:32:45] 
[2025-02-23 16:32:45] 2025-02-23 15:28:07,633 | INFO     | **************************************
[2025-02-23 16:32:45] 2025-02-23 15:28:08,135 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-02-23 16:32:45] 2025-02-23 15:28:08,149 | INFO     | sufficient remaining disk space (633231900672 B)
[2025-02-23 16:32:45] 2025-02-23 15:28:08,150 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-23 16:32:45] 2025-02-23 15:28:08,150 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-23 16:32:45] 2025-02-23 15:28:08,150 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-23 16:32:45] 2025-02-23 15:28:08,150 | INFO     | aborting loop
[2025-02-23 16:32:45] 2025-02-23 15:28:08,151 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-23 16:32:45] 2025-02-23 15:28:08,258 | INFO     | all job control threads have been joined
[2025-02-23 16:32:45] 2025-02-23 15:28:08,268 | INFO     | all data control threads have been joined
[2025-02-23 16:32:45] 2025-02-23 15:28:08,282 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-23 16:32:45] 2025-02-23 15:28:08,740 | INFO     | found 0 job(s) in 20 queues
[2025-02-23 16:32:45] 2025-02-23 15:28:08,740 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-23 16:32:45] 2025-02-23 15:28:08,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-23 16:32:45] 2025-02-23 15:28:09,039 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-23 16:32:45] 2025-02-23 15:28:09,155 | INFO     | [job] retrieve thread has finished
[2025-02-23 16:32:45] 2025-02-23 15:28:09,156 | INFO     | [job] queue monitor thread has finished
[2025-02-23 16:32:45] 2025-02-23 15:28:09,156 | INFO     | [job] job monitor thread has finished
[2025-02-23 16:32:45] 2025-02-23 15:28:09,239 | INFO     | [job] validate thread has finished
[2025-02-23 16:32:45] 2025-02-23 15:28:09,263 | INFO     | [job] control thread has finished
[2025-02-23 16:32:45] 2025-02-23 15:28:09,273 | INFO     | [data] control thread has finished
[2025-02-23 16:32:45] 2025-02-23 15:28:09,354 | INFO     | [job] create_data_payload thread has finished
[2025-02-23 16:32:45] 2025-02-23 15:28:09,495 | INFO     | [payload] failed_post thread has finished
[2025-02-23 16:32:45] 2025-02-23 15:28:09,576 | INFO     | all payload control threads have been joined
[2025-02-23 16:32:45] 2025-02-23 15:28:09,660 | INFO     | [payload] validate_post thread has finished
[2025-02-23 16:32:45] 2025-02-23 15:28:09,683 | INFO     | [payload] validate_pre thread has finished
[2025-02-23 16:32:45] 2025-02-23 15:28:10,133 | INFO     | [payload] execute_payloads thread has finished
[2025-02-23 16:32:45] 2025-02-23 15:28:10,288 | INFO     | [data] copytool_out thread has finished
[2025-02-23 16:32:45] 2025-02-23 15:28:10,406 | INFO     | [data] copytool_in thread has finished
[2025-02-23 16:32:45] 2025-02-23 15:28:10,451 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-23 16:32:45] 2025-02-23 15:28:10,582 | INFO     | [payload] control thread has finished
[2025-02-23 16:32:45] 2025-02-23 15:28:13,044 | INFO     | [data] queue_monitor thread has finished
[2025-02-23 16:32:45] 2025-02-23 15:28:13,463 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23425293969216)>', '<ExcThread(monitor, started 23425064081152)>']
[2025-02-23 16:32:45] 2025-02-23 15:28:13,765 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-23 16:32:45] 2025-02-23 15:28:13,765 | INFO     | [monitor] control thread has ended
[2025-02-23 16:32:45] 2025-02-23 15:28:18,488 | INFO     | all workflow threads have been joined
[2025-02-23 16:32:45] 2025-02-23 15:28:18,488 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-23 16:32:45] 2025-02-23 15:28:18,488 | INFO     | traces error code: 0
[2025-02-23 16:32:45] 2025-02-23 15:28:18,488 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-23 16:32:45] 2025-02-23 15:28:18,665 [wrapper] ==== pilot stdout END ====
[2025-02-23 16:32:45] 2025-02-23 15:28:18,667 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-23 16:32:45] 2025-02-23 15:28:18,670 [wrapper] pilotpid: 1804432
[2025-02-23 16:32:45] 2025-02-23 15:28:18,672 [wrapper] Pilot exit status: 0
[2025-02-23 16:32:45] 2025-02-23 15:28:18,681 [wrapper] pandaids: 6521466914
[2025-02-23 16:32:45] 2025-02-23 15:28:18,745 [wrapper] cleanup supervisor_pilot 2664805 1804433
[2025-02-23 16:32:45] 2025-02-23 15:28:18,748 [wrapper] Test setup, not cleaning
[2025-02-23 16:32:45] 2025-02-23 15:28:18,753 [wrapper] apfmon messages muted
[2025-02-23 16:32:45] 2025-02-23 15:28:18,755 [wrapper] ==== wrapper stdout END ====
[2025-02-23 16:32:45] 2025-02-23 15:28:18,758 [wrapper] ==== wrapper stderr END ====
[2025-02-23 16:32:45]  *** Error codes and diagnostics ***
[2025-02-23 16:32:45]     "exeErrorCode": 0,
[2025-02-23 16:32:45]     "exeErrorDiag": "",
[2025-02-23 16:32:45]     "pilotErrorCode": 0,
[2025-02-23 16:32:45]     "pilotErrorDiag": "",
[2025-02-23 16:32:45]  *** Listing of results directory ***
[2025-02-23 16:32:45] total 666424
[2025-02-23 16:32:45] -rw-r--r-- 1 boinc boinc    491065 Feb 20 23:47 pilot3.tar.gz
[2025-02-23 16:32:45] -rwx------ 1 boinc boinc     35865 Feb 21 00:01 runpilot2-wrapper.sh
[2025-02-23 16:32:45] -rw-r--r-- 1 boinc boinc      5118 Feb 21 00:01 queuedata.json
[2025-02-23 16:32:45] -rw-r--r-- 1 boinc boinc       100 Feb 23 09:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-23 16:32:45] -rwxr-xr-x 1 boinc boinc      7986 Feb 23 09:33 run_atlas
[2025-02-23 16:32:45] -rw-r--r-- 1 boinc boinc       105 Feb 23 09:33 job.xml
[2025-02-23 16:32:45] -rw-r--r-- 2 boinc boinc 343407329 Feb 23 09:33 EVNT.43078917._001538.pool.root.1
[2025-02-23 16:32:45] -rw-r--r-- 1 boinc boinc      6633 Feb 23 09:33 init_data.xml
[2025-02-23 16:32:45] -rw-r--r-- 2 boinc boinc     17569 Feb 23 09:33 start_atlas.sh
[2025-02-23 16:32:45] drwxrwx--x 2 boinc boinc      4096 Feb 23 09:33 shared
[2025-02-23 16:32:45] -rw-r--r-- 2 boinc boinc    503558 Feb 23 09:33 input.tar.gz
[2025-02-23 16:32:45] -rw-r--r-- 1 boinc boinc         0 Feb 23 09:33 boinc_lockfile
[2025-02-23 16:32:45] -rw-r--r-- 1 boinc boinc      2546 Feb 23 09:33 pandaJob.out
[2025-02-23 16:32:45] -rw------- 1 boinc boinc       424 Feb 23 09:33 setup.sh.local
[2025-02-23 16:32:45] -rw------- 1 boinc boinc    987736 Feb 23 09:33 agis_schedconf.cvmfs.json
[2025-02-23 16:32:45] drwx------ 4 boinc boinc      4096 Feb 23 09:33 pilot3
[2025-02-23 16:32:45] -rw------- 1 boinc boinc 328734143 Feb 23 16:27 HITS.43078919._081256.pool.root.1
[2025-02-23 16:32:45] -rw-r--r-- 1 boinc boinc       531 Feb 23 16:27 boinc_task_state.xml
[2025-02-23 16:32:45] -rw------- 1 boinc boinc        95 Feb 23 16:27 pilot_heartbeat.json
[2025-02-23 16:32:45] -rw------- 1 boinc boinc      1039 Feb 23 16:27 memory_monitor_summary.json
[2025-02-23 16:32:45] -rw------- 1 boinc boinc   1582569 Feb 23 16:27 agis_ddmendpoints.agis.ALL.json
[2025-02-23 16:32:45] -rw------- 1 boinc boinc    487275 Feb 23 16:27 log.43078919._081256.job.log.tgz.1
[2025-02-23 16:32:45] -rw------- 1 boinc boinc      7747 Feb 23 16:28 heartbeat.json
[2025-02-23 16:32:45] -rw------- 1 boinc boinc      4225 Feb 23 16:28 pilotlog.txt
[2025-02-23 16:32:45] -rw------- 1 boinc boinc   2746830 Feb 23 16:28 log.43078919._081256.job.log.1
[2025-02-23 16:32:45] -rw------- 1 boinc boinc       357 Feb 23 16:28 output.list
[2025-02-23 16:32:45] -rw-r--r-- 1 boinc boinc       620 Feb 23 16:28 runtime_log
[2025-02-23 16:32:45] -rw------- 1 boinc boinc   3256320 Feb 23 16:28 result.tar.gz
[2025-02-23 16:32:45] -rw------- 1 boinc boinc       666 Feb 23 16:28 uBNMDm9iU56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmw7qKDmOJPlAo.diag
[2025-02-23 16:32:45] -rw-r--r-- 1 boinc boinc     11424 Feb 23 16:28 runtime_log.err
[2025-02-23 16:32:45] -rw-r--r-- 1 boinc boinc        28 Feb 23 16:32 wrapper_checkpoint.txt
[2025-02-23 16:32:45] -rw-r--r-- 1 boinc boinc      8192 Feb 23 16:32 boinc_mmap_file
[2025-02-23 16:32:45] -rw-r--r-- 1 boinc boinc     21473 Feb 23 16:32 stderr.txt
[2025-02-23 16:32:45] HITS file was successfully produced:
[2025-02-23 16:32:45] -rw------- 1 boinc boinc 328734143 Feb 23 16:27 shared/HITS.pool.root.1
[2025-02-23 16:32:45]  *** Contents of shared directory: ***
[2025-02-23 16:32:45] total 660092
[2025-02-23 16:32:45] -rw-r--r-- 2 boinc boinc 343407329 Feb 23 09:33 ATLAS.root_0
[2025-02-23 16:32:45] -rw-r--r-- 2 boinc boinc     17569 Feb 23 09:33 start_atlas.sh
[2025-02-23 16:32:45] -rw-r--r-- 2 boinc boinc    503558 Feb 23 09:33 input.tar.gz
[2025-02-23 16:32:45] -rw------- 1 boinc boinc 328734143 Feb 23 16:27 HITS.pool.root.1
[2025-02-23 16:32:45] -rw------- 1 boinc boinc   3256320 Feb 23 16:28 result.tar.gz
16:32:47 (1800724): run_atlas exited; CPU time 95146.106670
16:32:47 (1800724): called boinc_finish(0)

</stderr_txt>
]]>

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