Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:34:24 (3980850): wrapper (7.7.26015): starting
13:34:24 (3980850): wrapper: running run_atlas (--nthreads 4)
[2025-02-23 13:34:24] Arguments: --nthreads 4
[2025-02-23 13:34:24] Threads: 4
[2025-02-23 13:34:24] Checking for CVMFS
[2025-02-23 13:34:24] No cvmfs_config command found, will try listing directly
[2025-02-23 13:34:24] CVMFS is ok
[2025-02-23 13:34:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 13:34:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 13:34:24] Further information can be found at the LHC@home message board.
[2025-02-23 13:34:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 13:34:24] Checking for apptainer binary...
[2025-02-23 13:34:24] which: no apptainer in ((null))
[2025-02-23 13:34:24] apptainer is not installed, using version from CVMFS
[2025-02-23 13:34:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 13:34:24] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot72/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-02-23 13:34:24] apptainer works
[2025-02-23 13:34:24] Set ATHENA_PROC_NUMBER=4
[2025-02-23 13:34:24] Set ATHENA_CORE_NUMBER=4
[2025-02-23 13:34:24] Starting ATLAS job with PandaID=6521465830
[2025-02-23 13:34:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot72/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-23 19:27:42]  *** The last 200 lines of the pilot log: ***
[2025-02-23 19:27:42] 2025-02-23 18:27:27,418 | INFO     | chi2: 5.0440819408298845
[2025-02-23 19:27:42] 2025-02-23 18:27:27,418 | INFO     | model: linear, x: [1740314107.0, 1740314168.0, 1740314229.0, 1740314290.0, 1740314351.0, 1740314412.0, 1740314473.0, 1740314534.0, 1740314595.0, 1740314656.0, 1740
[2025-02-23 19:27:42] 2025-02-23 18:27:27,418 | INFO     | sum of square deviations: 12403750705.5
[2025-02-23 19:27:42] 2025-02-23 18:27:27,421 | INFO     | sum of deviations: 176807235073.5
[2025-02-23 19:27:42] 2025-02-23 18:27:27,421 | INFO     | mean x: 1740324507.5
[2025-02-23 19:27:42] 2025-02-23 18:27:27,422 | INFO     | mean y: 2329449.611111111
[2025-02-23 19:27:42] 2025-02-23 18:27:27,422 | INFO     | -- intersect: -24804841510.805416
[2025-02-23 19:27:42] 2025-02-23 18:27:27,422 | INFO     | intersect: -24804841510.805416
[2025-02-23 19:27:42] 2025-02-23 18:27:27,422 | INFO     | chi2: 4.2590507044049755
[2025-02-23 19:27:42] 2025-02-23 18:27:27,422 | INFO     | current chi2=4.2590507044049755 (change=15.563411650203102 %)
[2025-02-23 19:27:42] 2025-02-23 18:27:27,422 | INFO     | right removable region: 341
[2025-02-23 19:27:42] 2025-02-23 18:27:27,423 | INFO     | model: linear, x: [1740314412.0, 1740314473.0, 1740314534.0, 1740314595.0, 1740314656.0, 1740314717.0, 1740314778.0, 1740314839.0, 1740314900.0, 1740314961.0, 1740
[2025-02-23 19:27:42] 2025-02-23 18:27:27,425 | INFO     | sum of square deviations: 12403750705.5
[2025-02-23 19:27:42] 2025-02-23 18:27:27,428 | INFO     | sum of deviations: 72875308590.0
[2025-02-23 19:27:42] 2025-02-23 18:27:27,429 | INFO     | mean x: 1740324812.5
[2025-02-23 19:27:42] 2025-02-23 18:27:27,429 | INFO     | mean y: 2347367.432748538
[2025-02-23 19:27:42] 2025-02-23 18:27:27,429 | INFO     | -- intersect: -10222520156.028088
[2025-02-23 19:27:42] 2025-02-23 18:27:27,429 | INFO     | intersect: -10222520156.028088
[2025-02-23 19:27:42] 2025-02-23 18:27:27,429 | INFO     | chi2: 2.466126471485616
[2025-02-23 19:27:42] 2025-02-23 18:27:27,429 | INFO     | current chi2=2.466126471485616 (change=51.10851686362825 %)
[2025-02-23 19:27:42] 2025-02-23 18:27:27,430 | INFO     | model: linear, x: [1740314717.0, 1740314778.0, 1740314839.0, 1740314900.0, 1740314961.0, 1740315022.0, 1740315083.0, 1740315144.0, 1740315205.0, 1740315266.0, 1740
[2025-02-23 19:27:42] 2025-02-23 18:27:27,430 | INFO     | sum of square deviations: 11867638328.0
[2025-02-23 19:27:42] 2025-02-23 18:27:27,433 | INFO     | sum of deviations: 4675227514.0
[2025-02-23 19:27:42] 2025-02-23 18:27:27,433 | INFO     | mean x: 1740324965.0
[2025-02-23 19:27:42] 2025-02-23 18:27:27,433 | INFO     | mean y: 2366767.943620178
[2025-02-23 19:27:42] 2025-02-23 18:27:27,433 | INFO     | -- intersect: -683230057.2033323
[2025-02-23 19:27:42] 2025-02-23 18:27:27,433 | INFO     | intersect: -683230057.2033323
[2025-02-23 19:27:42] 2025-02-23 18:27:27,433 | INFO     | chi2: 0.9120335089107987
[2025-02-23 19:27:42] 2025-02-23 18:27:27,434 | INFO     | current chi2=0.9120335089107987 (change=63.01756947763584 %)
[2025-02-23 19:27:42] 2025-02-23 18:27:27,434 | INFO     | model: linear, x: [1740315022.0, 1740315083.0, 1740315144.0, 1740315205.0, 1740315266.0, 1740315327.0, 1740315388.0, 1740315449.0, 1740315510.0, 1740315571.0, 1740
[2025-02-23 19:27:42] 2025-02-23 18:27:27,434 | INFO     | sum of square deviations: 11347200663.0
[2025-02-23 19:27:42] 2025-02-23 18:27:27,437 | INFO     | sum of deviations: -9223565969.5
[2025-02-23 19:27:42] 2025-02-23 18:27:27,437 | INFO     | mean x: 1740325117.5
[2025-02-23 19:27:42] 2025-02-23 18:27:27,437 | INFO     | mean y: 2370818.015060241
[2025-02-23 19:27:42] 2025-02-23 18:27:27,437 | INFO     | -- intersect: 1416993155.8380015
[2025-02-23 19:27:42] 2025-02-23 18:27:27,437 | INFO     | intersect: 1416993155.8380015
[2025-02-23 19:27:42] 2025-02-23 18:27:27,438 | INFO     | chi2: 0.816070172611031
[2025-02-23 19:27:42] 2025-02-23 18:27:27,438 | INFO     | current chi2=0.816070172611031 (change=10.52190904853622 %)
[2025-02-23 19:27:42] 2025-02-23 18:27:27,438 | INFO     | left removable region: 30
[2025-02-23 19:27:42] 2025-02-23 18:27:27,438 | INFO     | model: linear, x: [1740315937.0, 1740315998.0, 1740316059.0, 1740316120.0, 1740316181.0, 1740316242.0, 1740316303.0, 1740316364.0, 1740316425.0, 1740316486.0, 1740
[2025-02-23 19:27:42] 2025-02-23 18:27:27,438 | INFO     | sum of square deviations: 9327281860.0
[2025-02-23 19:27:42] 2025-02-23 18:27:27,441 | INFO     | sum of deviations: 10838928167.000002
[2025-02-23 19:27:42] 2025-02-23 18:27:27,441 | INFO     | mean x: 1740325392.0
[2025-02-23 19:27:42] 2025-02-23 18:27:27,441 | INFO     | mean y: 2377384.4469453376
[2025-02-23 19:27:42] 2025-02-23 18:27:27,441 | INFO     | -- intersect: -2019997643.372158
[2025-02-23 19:27:42] 2025-02-23 18:27:27,441 | INFO     | intersect: -2019997643.372158
[2025-02-23 19:27:42] 2025-02-23 18:27:27,441 | INFO     | chi2: 0.001406909495310634
[2025-02-23 19:27:42] 2025-02-23 18:27:27,442 | INFO     | -- intersect: -2019997643.372158
[2025-02-23 19:27:42] 2025-02-23 18:27:27,442 | INFO     | current memory leak: 1.16 B/s (using 311 data points, chi2=0.00)
[2025-02-23 19:27:42] 2025-02-23 18:27:27,442 | INFO     | ..............................
[2025-02-23 19:27:42] 2025-02-23 18:27:27,443 | INFO     | . Timing measurements:
[2025-02-23 19:27:42] 2025-02-23 18:27:27,443 | INFO     | . get job = 0 s
[2025-02-23 19:27:42] 2025-02-23 18:27:27,443 | INFO     | . initial setup = 1 s
[2025-02-23 19:27:42] 2025-02-23 18:27:27,443 | INFO     | . payload setup = 7 s
[2025-02-23 19:27:42] 2025-02-23 18:27:27,443 | INFO     | . stage-in = 0 s
[2025-02-23 19:27:42] 2025-02-23 18:27:27,443 | INFO     | . payload execution = 21135 s
[2025-02-23 19:27:42] 2025-02-23 18:27:27,443 | INFO     | . stage-out = 1 s
[2025-02-23 19:27:42] 2025-02-23 18:27:27,443 | INFO     | . log creation = 0 s
[2025-02-23 19:27:42] 2025-02-23 18:27:27,443 | INFO     | ..............................
[2025-02-23 19:27:42] 2025-02-23 18:27:27,588 | INFO     | 
[2025-02-23 19:27:42] 2025-02-23 18:27:27,589 | INFO     | job summary report
[2025-02-23 19:27:42] 2025-02-23 18:27:27,589 | INFO     | --------------------------------------------------
[2025-02-23 19:27:42] 2025-02-23 18:27:27,589 | INFO     | PanDA job id: 6521465830
[2025-02-23 19:27:42] 2025-02-23 18:27:27,589 | INFO     | task id: 43078919
[2025-02-23 19:27:42] 2025-02-23 18:27:27,589 | INFO     | errors: (none)
[2025-02-23 19:27:42] 2025-02-23 18:27:27,589 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-23 19:27:42] 2025-02-23 18:27:27,589 | INFO     | pilot state: finished 
[2025-02-23 19:27:42] 2025-02-23 18:27:27,590 | INFO     | transexitcode: 0
[2025-02-23 19:27:42] 2025-02-23 18:27:27,590 | INFO     | exeerrorcode: 0
[2025-02-23 19:27:42] 2025-02-23 18:27:27,590 | INFO     | exeerrordiag: 
[2025-02-23 19:27:42] 2025-02-23 18:27:27,590 | INFO     | exitcode: 0
[2025-02-23 19:27:42] 2025-02-23 18:27:27,590 | INFO     | exitmsg: OK
[2025-02-23 19:27:42] 2025-02-23 18:27:27,590 | INFO     | cpuconsumptiontime: 80719 s
[2025-02-23 19:27:42] 2025-02-23 18:27:27,590 | INFO     | nevents: 400
[2025-02-23 19:27:42] 2025-02-23 18:27:27,590 | INFO     | neventsw: 0
[2025-02-23 19:27:42] 2025-02-23 18:27:27,590 | INFO     | pid: 4011679
[2025-02-23 19:27:42] 2025-02-23 18:27:27,590 | INFO     | pgrp: 4011679
[2025-02-23 19:27:42] 2025-02-23 18:27:27,590 | INFO     | corecount: 4
[2025-02-23 19:27:42] 2025-02-23 18:27:27,591 | INFO     | event service: False
[2025-02-23 19:27:42] 2025-02-23 18:27:27,591 | INFO     | sizes: {0: 2383151, 1: 2383350, 7: 2383556, 12: 2383584, 21146: 2416724, 21148: 2425871, 21154: 2425985}
[2025-02-23 19:27:42] 2025-02-23 18:27:27,591 | INFO     | --------------------------------------------------
[2025-02-23 19:27:42] 2025-02-23 18:27:27,591 | INFO     | 
[2025-02-23 19:27:42] 2025-02-23 18:27:27,591 | INFO     | executing command: ls -lF /scratch/boinc/var/slot72/slots/0
[2025-02-23 19:27:42] 2025-02-23 18:27:27,622 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-23 19:27:42] 2025-02-23 18:27:27,622 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-23 19:27:42] 2025-02-23 18:27:27,622 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-23 19:27:42] 2025-02-23 18:27:27,622 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-23 19:27:42] 2025-02-23 18:27:27,622 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-23 19:27:42] 2025-02-23 18:27:27,623 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-23 19:27:42] 2025-02-23 18:27:27,623 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-23 19:27:42] 2025-02-23 18:27:27,623 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-23 19:27:42] 2025-02-23 18:27:27,623 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-23 19:27:42] 2025-02-23 18:27:27,623 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-23 19:27:42] 2025-02-23 18:27:27,623 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-23 19:27:42] 2025-02-23 18:27:27,623 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-23 19:27:42] 2025-02-23 18:27:27,623 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-23 19:27:42] 2025-02-23 18:27:27,623 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-23 19:27:42] 2025-02-23 18:27:27,623 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-23 19:27:42] 2025-02-23 18:27:27,624 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-23 19:27:42] 2025-02-23 18:27:27,624 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-23 19:27:42] 2025-02-23 18:27:27,624 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-23 19:27:42] 2025-02-23 18:27:27,624 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-23 19:27:42] 2025-02-23 18:27:27,624 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-23 19:27:42] 2025-02-23 18:27:27,624 | INFO     | job 6521465830 has completed (purged errors)
[2025-02-23 19:27:42] 2025-02-23 18:27:27,624 | INFO     | overall cleanup function is called
[2025-02-23 19:27:42] 2025-02-23 18:27:27,756 | WARNING  | process 4011679 can no longer be monitored (due to stat problems) - aborting
[2025-02-23 19:27:42] 2025-02-23 18:27:28,229 | INFO     | using path: /scratch/boinc/var/slot72/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-02-23 19:27:42] 2025-02-23 18:27:28,230 | INFO     | using path: /scratch/boinc/var/slot72/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-02-23 19:27:42] 2025-02-23 18:27:28,230 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot72/slots/0/PanDA_Pilot-6521465830/payload.stdout) since it has not been created yet
[2025-02-23 19:27:42] 2025-02-23 18:27:28,231 | INFO     | executing command: df -mP /scratch/boinc/var/slot72/slots/0
[2025-02-23 19:27:42] 2025-02-23 18:27:28,253 | INFO     | sufficient remaining disk space (3225266683904 B)
[2025-02-23 19:27:42] 2025-02-23 18:27:28,253 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-02-23 19:27:42] 2025-02-23 18:27:28,253 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot72/slots/0/PanDA_Pilot-6521465830/HITS.43078919._080991.pool.root.1 since it does not exist
[2025-02-23 19:27:42] 2025-02-23 18:27:28,564 | INFO     | number of running child processes to parent process 4011679: 1
[2025-02-23 19:27:42] 2025-02-23 18:27:28,564 | INFO     | maximum number of monitored processes: 6
[2025-02-23 19:27:42] 2025-02-23 18:27:28,564 | INFO     | aborting job monitoring since job object (job id=6521465830) has expired
[2025-02-23 19:27:42] 2025-02-23 18:27:28,634 | INFO     | --- collectZombieJob: --- 10, [4011679]
[2025-02-23 19:27:42] 2025-02-23 18:27:28,634 | INFO     | zombie collector waiting for pid 4011679
[2025-02-23 19:27:42] 2025-02-23 18:27:28,634 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-23 19:27:42] 2025-02-23 18:27:28,635 | INFO     | collected zombie processes
[2025-02-23 19:27:42] 2025-02-23 18:27:28,635 | INFO     | will attempt to kill all subprocesses of pid=4011679
[2025-02-23 19:27:42] 2025-02-23 18:27:28,957 | INFO     | process IDs to be killed: [4011679] (in reverse order)
[2025-02-23 19:27:42] 2025-02-23 18:27:29,198 | WARNING  | found no corresponding commands to process id(s)
[2025-02-23 19:27:42] 2025-02-23 18:27:29,198 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-23 19:27:42] 2025-02-23 18:27:29,226 | INFO     | did not find any defunct processes belonging to 4011679
[2025-02-23 19:27:42] 2025-02-23 18:27:29,246 | INFO     | did not find any defunct processes belonging to 4011679
[2025-02-23 19:27:42] 2025-02-23 18:27:29,246 | INFO     | ready for new job
[2025-02-23 19:27:42] 2025-02-23 18:27:29,246 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-23 19:27:42] 2025-02-23 18:27:29,250 | INFO     | **************************************
[2025-02-23 19:27:42] 2025-02-23 18:27:29,250 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-23 19:27:42] 2025-02-23 18:27:29,250 | INFO     | **************************************
[2025-02-23 19:27:42] 2025-02-23 18:27:29,250 | INFO     | 
[2025-02-23 19:27:42] 2025-02-23 18:27:29,259 | INFO     | architecture information:
[2025-02-23 19:27:42] 2025-02-23 18:27:29,259 | INFO     | executing command: cat /etc/os-release
[2025-02-23 19:27:42] 2025-02-23 18:27:29,284 | INFO     | cat /etc/os-release:
[2025-02-23 19:27:42] NAME="CentOS Linux"
[2025-02-23 19:27:42] VERSION="7 (Core)"
[2025-02-23 19:27:42] ID="centos"
[2025-02-23 19:27:42] ID_LIKE="rhel fedora"
[2025-02-23 19:27:42] VERSION_ID="7"
[2025-02-23 19:27:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-23 19:27:42] ANSI_COLOR="0;31"
[2025-02-23 19:27:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-23 19:27:42] HOME_URL="https://www.centos.org/"
[2025-02-23 19:27:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-23 19:27:42] 
[2025-02-23 19:27:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-23 19:27:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-23 19:27:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-23 19:27:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-23 19:27:42] 
[2025-02-23 19:27:42] 2025-02-23 18:27:29,284 | INFO     | **************************************
[2025-02-23 19:27:42] 2025-02-23 18:27:29,786 | INFO     | executing command: df -mP /scratch/boinc/var/slot72/slots/0
[2025-02-23 19:27:42] 2025-02-23 18:27:29,813 | INFO     | sufficient remaining disk space (3225268781056 B)
[2025-02-23 19:27:42] 2025-02-23 18:27:29,814 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-23 19:27:42] 2025-02-23 18:27:29,814 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-23 19:27:42] 2025-02-23 18:27:29,814 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-23 19:27:42] 2025-02-23 18:27:29,815 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-23 19:27:42] 2025-02-23 18:27:29,815 | INFO     | aborting loop
[2025-02-23 19:27:42] 2025-02-23 18:27:30,364 | INFO     | found 0 job(s) in 20 queues
[2025-02-23 19:27:42] 2025-02-23 18:27:30,365 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-23 19:27:42] 2025-02-23 18:27:30,365 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-23 19:27:42] 2025-02-23 18:27:30,422 | INFO     | all job control threads have been joined
[2025-02-23 19:27:42] 2025-02-23 18:27:30,725 | INFO     | all data control threads have been joined
[2025-02-23 19:27:42] 2025-02-23 18:27:30,819 | INFO     | [job] retrieve thread has finished
[2025-02-23 19:27:42] 2025-02-23 18:27:30,820 | INFO     | [job] job monitor thread has finished
[2025-02-23 19:27:42] 2025-02-23 18:27:31,027 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-23 19:27:42] 2025-02-23 18:27:31,035 | INFO     | all payload control threads have been joined
[2025-02-23 19:27:42] 2025-02-23 18:27:31,085 | INFO     | [payload] failed_post thread has finished
[2025-02-23 19:27:42] 2025-02-23 18:27:31,091 | INFO     | [payload] execute_payloads thread has finished
[2025-02-23 19:27:42] 2025-02-23 18:27:31,108 | INFO     | [job] validate thread has finished
[2025-02-23 19:27:42] 2025-02-23 18:27:31,125 | INFO     | [payload] validate_pre thread has finished
[2025-02-23 19:27:42] 2025-02-23 18:27:31,427 | INFO     | [job] control thread has finished
[2025-02-23 19:27:42] 2025-02-23 18:27:31,730 | INFO     | [data] control thread has finished
[2025-02-23 19:27:42] 2025-02-23 18:27:31,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-23 19:27:42] 2025-02-23 18:27:31,820 | INFO     | [data] copytool_out thread has finished
[2025-02-23 19:27:42] 2025-02-23 18:27:31,898 | INFO     | [payload] validate_post thread has finished
[2025-02-23 19:27:42] 2025-02-23 18:27:31,988 | INFO     | [data] copytool_in thread has finished
[2025-02-23 19:27:42] 2025-02-23 18:27:31,993 | INFO     | [job] create_data_payload thread has finished
[2025-02-23 19:27:42] 2025-02-23 18:27:32,041 | INFO     | [payload] control thread has finished
[2025-02-23 19:27:42] 2025-02-23 18:27:32,547 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-23 19:27:42] 2025-02-23 18:27:33,552 | INFO     | [job] queue monitor thread has finished
[2025-02-23 19:27:42] 2025-02-23 18:27:35,738 | INFO     | [data] queue_monitor thread has finished
[2025-02-23 19:27:42] 2025-02-23 18:27:36,951 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23437868336960)>', '<ExcThread(monitor, started 23437431002880)>']
[2025-02-23 19:27:42] 2025-02-23 18:27:37,399 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-23 19:27:42] 2025-02-23 18:27:37,399 | INFO     | [monitor] control thread has ended
[2025-02-23 19:27:42] 2025-02-23 18:27:41,976 | INFO     | all workflow threads have been joined
[2025-02-23 19:27:42] 2025-02-23 18:27:41,976 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-23 19:27:42] 2025-02-23 18:27:41,977 | INFO     | traces error code: 0
[2025-02-23 19:27:42] 2025-02-23 18:27:41,977 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-23 19:27:42] 2025-02-23 18:27:42,110 [wrapper] ==== pilot stdout END ====
[2025-02-23 19:27:42] 2025-02-23 18:27:42,113 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-23 19:27:42] 2025-02-23 18:27:42,117 [wrapper] pilotpid: 3988448
[2025-02-23 19:27:42] 2025-02-23 18:27:42,120 [wrapper] Pilot exit status: 0
[2025-02-23 19:27:42] 2025-02-23 18:27:42,133 [wrapper] pandaids: 6521465830
[2025-02-23 19:27:42] 2025-02-23 18:27:42,295 [wrapper] cleanup supervisor_pilot  999633 3988449
[2025-02-23 19:27:42] 2025-02-23 18:27:42,298 [wrapper] Test setup, not cleaning
[2025-02-23 19:27:42] 2025-02-23 18:27:42,304 [wrapper] apfmon messages muted
[2025-02-23 19:27:42] 2025-02-23 18:27:42,306 [wrapper] ==== wrapper stdout END ====
[2025-02-23 19:27:42] 2025-02-23 18:27:42,309 [wrapper] ==== wrapper stderr END ====
[2025-02-23 19:27:42]  *** Error codes and diagnostics ***
[2025-02-23 19:27:42]     "exeErrorCode": 0,
[2025-02-23 19:27:42]     "exeErrorDiag": "",
[2025-02-23 19:27:42]     "pilotErrorCode": 0,
[2025-02-23 19:27:42]     "pilotErrorDiag": "",
[2025-02-23 19:27:42]  *** Listing of results directory ***
[2025-02-23 19:27:42] total 660636
[2025-02-23 19:27:42] -rw-r--r-- 1 boinc boinc    491065 Feb 20 23:03 pilot3.tar.gz
[2025-02-23 19:27:42] -rwx------ 1 boinc boinc     35865 Feb 20 23:17 runpilot2-wrapper.sh
[2025-02-23 19:27:42] -rw-r--r-- 1 boinc boinc      5118 Feb 20 23:17 queuedata.json
[2025-02-23 19:27:42] -rw-r--r-- 1 boinc boinc       100 Feb 23 13:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-23 19:27:42] -rwxr-xr-x 1 boinc boinc      7986 Feb 23 13:34 run_atlas
[2025-02-23 19:27:42] -rw-r--r-- 1 boinc boinc       105 Feb 23 13:34 job.xml
[2025-02-23 19:27:42] -rw-r--r-- 2 boinc boinc 342367766 Feb 23 13:34 EVNT.43078917._001929.pool.root.1
[2025-02-23 19:27:42] -rw-r--r-- 1 boinc boinc      6676 Feb 23 13:34 init_data.xml
[2025-02-23 19:27:42] drwxrwx--x 2 boinc boinc      4096 Feb 23 13:34 shared
[2025-02-23 19:27:42] -rw-r--r-- 2 boinc boinc    503560 Feb 23 13:34 input.tar.gz
[2025-02-23 19:27:42] -rw-r--r-- 2 boinc boinc     17569 Feb 23 13:34 start_atlas.sh
[2025-02-23 19:27:42] -rw-r--r-- 1 boinc boinc         0 Feb 23 13:34 boinc_lockfile
[2025-02-23 19:27:42] -rw-r--r-- 1 boinc boinc      2546 Feb 23 13:34 pandaJob.out
[2025-02-23 19:27:42] -rw------- 1 boinc boinc       424 Feb 23 13:34 setup.sh.local
[2025-02-23 19:27:42] -rw------- 1 boinc boinc    987736 Feb 23 13:34 agis_schedconf.cvmfs.json
[2025-02-23 19:27:42] drwx------ 4 boinc boinc      4096 Feb 23 13:34 pilot3
[2025-02-23 19:27:42] -rw------- 1 boinc boinc 324926767 Feb 23 19:26 HITS.43078919._080991.pool.root.1
[2025-02-23 19:27:42] -rw-r--r-- 1 boinc boinc       530 Feb 23 19:26 boinc_task_state.xml
[2025-02-23 19:27:42] -rw------- 1 boinc boinc        95 Feb 23 19:27 pilot_heartbeat.json
[2025-02-23 19:27:42] -rw------- 1 boinc boinc      1032 Feb 23 19:27 memory_monitor_summary.json
[2025-02-23 19:27:42] -rw------- 1 boinc boinc   1582569 Feb 23 19:27 agis_ddmendpoints.agis.ALL.json
[2025-02-23 19:27:42] -rw------- 1 boinc boinc    431352 Feb 23 19:27 log.43078919._080991.job.log.tgz.1
[2025-02-23 19:27:42] -rw------- 1 boinc boinc      7704 Feb 23 19:27 heartbeat.json
[2025-02-23 19:27:42] -rw-r--r-- 1 boinc boinc      8192 Feb 23 19:27 boinc_mmap_file
[2025-02-23 19:27:42] -rw-r--r-- 1 boinc boinc        27 Feb 23 19:27 wrapper_checkpoint.txt
[2025-02-23 19:27:42] -rw------- 1 boinc boinc      4226 Feb 23 19:27 pilotlog.txt
[2025-02-23 19:27:42] -rw------- 1 boinc boinc   2262380 Feb 23 19:27 log.43078919._080991.job.log.1
[2025-02-23 19:27:42] -rw------- 1 boinc boinc       357 Feb 23 19:27 output.list
[2025-02-23 19:27:42] -rw-r--r-- 1 boinc boinc       620 Feb 23 19:27 runtime_log
[2025-02-23 19:27:42] -rw------- 1 boinc boinc   2713600 Feb 23 19:27 result.tar.gz
[2025-02-23 19:27:42] -rw-r--r-- 1 boinc boinc     11424 Feb 23 19:27 runtime_log.err
[2025-02-23 19:27:42] -rw------- 1 boinc boinc       666 Feb 23 19:27 FnINDmN2T56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmHVcKDmrQ98wm.diag
[2025-02-23 19:27:42] -rw-r--r-- 1 boinc boinc     21694 Feb 23 19:27 stderr.txt
[2025-02-23 19:27:42] HITS file was successfully produced:
[2025-02-23 19:27:42] -rw------- 1 boinc boinc 324926767 Feb 23 19:26 shared/HITS.pool.root.1
[2025-02-23 19:27:42]  *** Contents of shared directory: ***
[2025-02-23 19:27:42] total 654828
[2025-02-23 19:27:42] -rw-r--r-- 2 boinc boinc 342367766 Feb 23 13:34 ATLAS.root_0
[2025-02-23 19:27:42] -rw-r--r-- 2 boinc boinc    503560 Feb 23 13:34 input.tar.gz
[2025-02-23 19:27:42] -rw-r--r-- 2 boinc boinc     17569 Feb 23 13:34 start_atlas.sh
[2025-02-23 19:27:42] -rw------- 1 boinc boinc 324926767 Feb 23 19:26 HITS.pool.root.1
[2025-02-23 19:27:42] -rw------- 1 boinc boinc   2713600 Feb 23 19:27 result.tar.gz
19:27:44 (3980850): run_atlas exited; CPU time 80358.921158
19:27:44 (3980850): called boinc_finish(0)

</stderr_txt>
]]>

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