Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:14:00 (3686): wrapper (7.7.26015): starting
07:14:00 (3686): wrapper: running run_atlas (--nthreads 4)
[2025-02-24 07:14:00] Arguments: --nthreads 4
[2025-02-24 07:14:00] Threads: 4
[2025-02-24 07:14:00] Checking for CVMFS
[2025-02-24 07:14:00] No cvmfs_config command found, will try listing directly
[2025-02-24 07:14:00] CVMFS is ok
[2025-02-24 07:14:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-24 07:14:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-24 07:14:00] Further information can be found at the LHC@home message board.
[2025-02-24 07:14:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-24 07:14:00] Checking for apptainer binary...
[2025-02-24 07:14:00] which: no apptainer in ((null))
[2025-02-24 07:14:00] apptainer is not installed, using version from CVMFS
[2025-02-24 07:14:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-24 07:14:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-02-24 07:14:00] apptainer works
[2025-02-24 07:14:00] Set ATHENA_PROC_NUMBER=4
[2025-02-24 07:14:00] Set ATHENA_CORE_NUMBER=4
[2025-02-24 07:14:00] Starting ATLAS job with PandaID=6521465677
[2025-02-24 07:14:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-24 13:43:17]  *** The last 200 lines of the pilot log: ***
[2025-02-24 13:43:17] 2025-02-24 12:38:47,470 | INFO     | sum of deviations: 15906462632.499998
[2025-02-24 13:43:17] 2025-02-24 12:38:47,470 | INFO     | mean x: 1740389479.5
[2025-02-24 13:43:17] 2025-02-24 12:38:47,470 | INFO     | mean y: 2382400.214673913
[2025-02-24 13:43:17] 2025-02-24 12:38:47,471 | INFO     | -- intersect: -1789053964.7793481
[2025-02-24 13:43:17] 2025-02-24 12:38:47,471 | INFO     | intersect: -1789053964.7793481
[2025-02-24 13:43:17] 2025-02-24 12:38:47,471 | INFO     | chi2: 0.10143350049481578
[2025-02-24 13:43:17] 2025-02-24 12:38:47,471 | INFO     | current chi2=0.10143350049481578 (change=92.77909898209671 %)
[2025-02-24 13:43:17] 2025-02-24 12:38:47,472 | INFO     | model: linear, x: [1740378591.0, 1740378652.0, 1740378713.0, 1740378774.0, 1740378835.0, 1740378896.0, 1740378957.0, 1740379018.0, 1740379079.0, 1740379140.0, 1740
[2025-02-24 13:43:17] 2025-02-24 12:38:47,472 | INFO     | sum of square deviations: 14831839022.0
[2025-02-24 13:43:17] 2025-02-24 12:38:47,476 | INFO     | sum of deviations: 1637270744.0000036
[2025-02-24 13:43:17] 2025-02-24 12:38:47,477 | INFO     | mean x: 1740389632.0
[2025-02-24 13:43:17] 2025-02-24 12:38:47,477 | INFO     | mean y: 2385886.8044077135
[2025-02-24 13:43:17] 2025-02-24 12:38:47,477 | INFO     | -- intersect: -189733851.24074623
[2025-02-24 13:43:17] 2025-02-24 12:38:47,477 | INFO     | intersect: -189733851.24074623
[2025-02-24 13:43:17] 2025-02-24 12:38:47,478 | INFO     | chi2: 0.02163155823556051
[2025-02-24 13:43:17] 2025-02-24 12:38:47,478 | INFO     | current chi2=0.02163155823556051 (change=78.67414795897132 %)
[2025-02-24 13:43:17] 2025-02-24 12:38:47,478 | INFO     | model: linear, x: [1740378896.0, 1740378957.0, 1740379018.0, 1740379079.0, 1740379140.0, 1740379201.0, 1740379262.0, 1740379323.0, 1740379384.0, 1740379445.0, 1740
[2025-02-24 13:43:17] 2025-02-24 12:38:47,479 | INFO     | sum of square deviations: 14227353269.5
[2025-02-24 13:43:17] 2025-02-24 12:38:47,483 | INFO     | sum of deviations: -2629470971.5
[2025-02-24 13:43:17] 2025-02-24 12:38:47,483 | INFO     | mean x: 1740389784.5
[2025-02-24 13:43:17] 2025-02-24 12:38:47,483 | INFO     | mean y: 2386956.9748603352
[2025-02-24 13:43:17] 2025-02-24 12:38:47,483 | INFO     | -- intersect: 324042315.5473067
[2025-02-24 13:43:17] 2025-02-24 12:38:47,483 | INFO     | intersect: 324042315.5473067
[2025-02-24 13:43:17] 2025-02-24 12:38:47,484 | INFO     | chi2: 0.012585772726105194
[2025-02-24 13:43:17] 2025-02-24 12:38:47,484 | INFO     | current chi2=0.012585772726105194 (change=41.817539961521526 %)
[2025-02-24 13:43:17] 2025-02-24 12:38:47,484 | INFO     | model: linear, x: [1740379201.0, 1740379262.0, 1740379323.0, 1740379384.0, 1740379445.0, 1740379506.0, 1740379567.0, 1740379628.0, 1740379689.0, 1740379750.0, 1740
[2025-02-24 13:43:17] 2025-02-24 12:38:47,485 | INFO     | sum of square deviations: 13639518992.0
[2025-02-24 13:43:17] 2025-02-24 12:38:47,489 | INFO     | sum of deviations: -2102444971.0000007
[2025-02-24 13:43:17] 2025-02-24 12:38:47,489 | INFO     | mean x: 1740389937.0
[2025-02-24 13:43:17] 2025-02-24 12:38:47,489 | INFO     | mean y: 2386819.6742209634
[2025-02-24 13:43:17] 2025-02-24 12:38:47,489 | INFO     | -- intersect: 270656842.44927764
[2025-02-24 13:43:17] 2025-02-24 12:38:47,490 | INFO     | intersect: 270656842.44927764
[2025-02-24 13:43:17] 2025-02-24 12:38:47,490 | INFO     | chi2: 0.012510164830680806
[2025-02-24 13:43:17] 2025-02-24 12:38:47,491 | INFO     | current chi2=0.012510164830680806 (change=0.600740988017072 %)
[2025-02-24 13:43:17] 2025-02-24 12:38:47,491 | INFO     | left removable region: 50
[2025-02-24 13:43:17] 2025-02-24 12:38:47,491 | INFO     | model: linear, x: [1740380726.0, 1740380787.0, 1740380848.0, 1740380909.0, 1740380970.0, 1740381031.0, 1740381092.0, 1740381153.0, 1740381214.0, 1740381275.0, 1740
[2025-02-24 13:43:17] 2025-02-24 12:38:47,492 | INFO     | sum of square deviations: 10352419220.5
[2025-02-24 13:43:17] 2025-02-24 12:38:47,495 | INFO     | sum of deviations: 7772113151.0
[2025-02-24 13:43:17] 2025-02-24 12:38:47,495 | INFO     | mean x: 1740390516.5
[2025-02-24 13:43:17] 2025-02-24 12:38:47,495 | INFO     | mean y: 2383572.3416149067
[2025-02-24 13:43:17] 2025-02-24 12:38:47,496 | INFO     | -- intersect: -1304220394.621001
[2025-02-24 13:43:17] 2025-02-24 12:38:47,496 | INFO     | intersect: -1304220394.621001
[2025-02-24 13:43:17] 2025-02-24 12:38:47,496 | INFO     | chi2: 0.0033026951068621524
[2025-02-24 13:43:17] 2025-02-24 12:38:47,496 | INFO     | -- intersect: -1304220394.621001
[2025-02-24 13:43:17] 2025-02-24 12:38:47,496 | INFO     | current memory leak: 0.75 B/s (using 322 data points, chi2=0.00)
[2025-02-24 13:43:17] 2025-02-24 12:38:47,498 | INFO     | ..............................
[2025-02-24 13:43:17] 2025-02-24 12:38:47,498 | INFO     | . Timing measurements:
[2025-02-24 13:43:17] 2025-02-24 12:38:47,498 | INFO     | . get job = 0 s
[2025-02-24 13:43:17] 2025-02-24 12:38:47,498 | INFO     | . initial setup = 1 s
[2025-02-24 13:43:17] 2025-02-24 12:38:47,498 | INFO     | . payload setup = 5 s
[2025-02-24 13:43:17] 2025-02-24 12:38:47,498 | INFO     | . stage-in = 0 s
[2025-02-24 13:43:17] 2025-02-24 12:38:47,498 | INFO     | . payload execution = 23045 s
[2025-02-24 13:43:17] 2025-02-24 12:38:47,498 | INFO     | . stage-out = 1 s
[2025-02-24 13:43:17] 2025-02-24 12:38:47,498 | INFO     | . log creation = 0 s
[2025-02-24 13:43:17] 2025-02-24 12:38:47,498 | INFO     | ..............................
[2025-02-24 13:43:17] 2025-02-24 12:38:47,599 | WARNING  | process 17195 can no longer be monitored (due to stat problems) - aborting
[2025-02-24 13:43:17] 2025-02-24 12:38:47,620 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6521465677/memory_monitor_summary.json (trf name=prmon)
[2025-02-24 13:43:17] 2025-02-24 12:38:47,632 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6521465677/memory_monitor_summary.json (trf name=prmon)
[2025-02-24 13:43:17] 2025-02-24 12:38:47,641 | INFO     | 
[2025-02-24 13:43:17] 2025-02-24 12:38:47,641 | INFO     | job summary report
[2025-02-24 13:43:17] 2025-02-24 12:38:47,641 | INFO     | --------------------------------------------------
[2025-02-24 13:43:17] 2025-02-24 12:38:47,642 | INFO     | PanDA job id: 6521465677
[2025-02-24 13:43:17] 2025-02-24 12:38:47,642 | INFO     | task id: 43078919
[2025-02-24 13:43:17] 2025-02-24 12:38:47,642 | INFO     | errors: (none)
[2025-02-24 13:43:17] 2025-02-24 12:38:47,642 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-24 13:43:17] 2025-02-24 12:38:47,642 | INFO     | pilot state: finished 
[2025-02-24 13:43:17] 2025-02-24 12:38:47,642 | INFO     | transexitcode: 0
[2025-02-24 13:43:17] 2025-02-24 12:38:47,642 | INFO     | exeerrorcode: 0
[2025-02-24 13:43:17] 2025-02-24 12:38:47,642 | INFO     | exeerrordiag: 
[2025-02-24 13:43:17] 2025-02-24 12:38:47,642 | INFO     | exitcode: 0
[2025-02-24 13:43:17] 2025-02-24 12:38:47,642 | INFO     | exitmsg: OK
[2025-02-24 13:43:17] 2025-02-24 12:38:47,642 | INFO     | cpuconsumptiontime: 88020 s
[2025-02-24 13:43:17] 2025-02-24 12:38:47,642 | INFO     | nevents: 400
[2025-02-24 13:43:17] 2025-02-24 12:38:47,643 | INFO     | neventsw: 0
[2025-02-24 13:43:17] 2025-02-24 12:38:47,643 | INFO     | pid: 17195
[2025-02-24 13:43:17] 2025-02-24 12:38:47,644 | INFO     | pgrp: 17195
[2025-02-24 13:43:17] 2025-02-24 12:38:47,644 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 1962359 B
[2025-02-24 13:43:17] 2025-02-24 12:38:47,644 | INFO     | corecount: 4
[2025-02-24 13:43:17] 2025-02-24 12:38:47,645 | INFO     | event service: False
[2025-02-24 13:43:17] 2025-02-24 12:38:47,645 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16522 B
[2025-02-24 13:43:17] 2025-02-24 12:38:47,645 | INFO     | sizes: {0: 2383320, 5: 2383526, 11: 2383582, 23054: 2418074, 23056: 2427093, 23062: 2427207}
[2025-02-24 13:43:17] 2025-02-24 12:38:47,645 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-02-24 13:43:17] 2025-02-24 12:38:47,645 | INFO     | --------------------------------------------------
[2025-02-24 13:43:17] 2025-02-24 12:38:47,645 | INFO     | 
[2025-02-24 13:43:17] 2025-02-24 12:38:47,646 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-02-24 13:43:17] 2025-02-24 12:38:47,663 | INFO     | sufficient remaining disk space (621896794112 B)
[2025-02-24 13:43:17] 2025-02-24 12:38:47,664 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-02-24 13:43:17] 2025-02-24 12:38:47,665 | INFO     | size of work directory /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6521465677: 2379025 B (within 2537553920 B limit)
[2025-02-24 13:43:17] 2025-02-24 12:38:47,665 | INFO     | pfn file=/scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6521465677/HITS.43078919._080886.pool.root.1 does not exist (skip from workdir size calculation)
[2025-02-24 13:43:17] 2025-02-24 12:38:47,665 | INFO     | total size of present files: 0 B (workdir size: 2379025 B)
[2025-02-24 13:43:17] 2025-02-24 12:38:47,665 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6521465677/HITS.43078919._080886.pool.root.1 since it does not exist
[2025-02-24 13:43:17] 2025-02-24 12:38:47,675 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-24 13:43:17] 2025-02-24 12:38:47,676 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-24 13:43:17] 2025-02-24 12:38:47,676 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-24 13:43:17] 2025-02-24 12:38:47,676 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-24 13:43:17] 2025-02-24 12:38:47,676 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-24 13:43:17] 2025-02-24 12:38:47,676 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-24 13:43:17] 2025-02-24 12:38:47,677 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-24 13:43:17] 2025-02-24 12:38:47,677 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-24 13:43:17] 2025-02-24 12:38:47,677 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-24 13:43:17] 2025-02-24 12:38:47,677 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-24 13:43:17] 2025-02-24 12:38:47,677 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-24 13:43:17] 2025-02-24 12:38:47,677 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-24 13:43:17] 2025-02-24 12:38:47,677 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-24 13:43:17] 2025-02-24 12:38:47,677 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-24 13:43:17] 2025-02-24 12:38:47,677 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-24 13:43:17] 2025-02-24 12:38:47,677 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-24 13:43:17] 2025-02-24 12:38:47,678 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-24 13:43:17] 2025-02-24 12:38:47,678 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-24 13:43:17] 2025-02-24 12:38:47,678 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-24 13:43:17] 2025-02-24 12:38:47,678 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-24 13:43:17] 2025-02-24 12:38:47,678 | INFO     | job 6521465677 has completed (purged errors)
[2025-02-24 13:43:17] 2025-02-24 12:38:47,678 | INFO     | overall cleanup function is called
[2025-02-24 13:43:17] 2025-02-24 12:38:47,818 | INFO     | number of running child processes to parent process 17195: 1
[2025-02-24 13:43:17] 2025-02-24 12:38:47,818 | INFO     | maximum number of monitored processes: 6
[2025-02-24 13:43:17] 2025-02-24 12:38:47,818 | INFO     | aborting job monitoring since job object (job id=6521465677) has expired
[2025-02-24 13:43:17] 2025-02-24 12:38:48,686 | INFO     | --- collectZombieJob: --- 10, [17195]
[2025-02-24 13:43:17] 2025-02-24 12:38:48,686 | INFO     | zombie collector waiting for pid 17195
[2025-02-24 13:43:17] 2025-02-24 12:38:48,686 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-24 13:43:17] 2025-02-24 12:38:48,687 | INFO     | collected zombie processes
[2025-02-24 13:43:17] 2025-02-24 12:38:48,687 | INFO     | will attempt to kill all subprocesses of pid=17195
[2025-02-24 13:43:17] 2025-02-24 12:38:48,836 | INFO     | process IDs to be killed: [17195] (in reverse order)
[2025-02-24 13:43:17] 2025-02-24 12:38:48,950 | WARNING  | found no corresponding commands to process id(s)
[2025-02-24 13:43:17] 2025-02-24 12:38:48,951 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-24 13:43:17] 2025-02-24 12:38:48,961 | INFO     | did not find any defunct processes belonging to 17195
[2025-02-24 13:43:17] 2025-02-24 12:38:48,972 | INFO     | did not find any defunct processes belonging to 17195
[2025-02-24 13:43:17] 2025-02-24 12:38:48,972 | INFO     | ready for new job
[2025-02-24 13:43:17] 2025-02-24 12:38:48,972 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-24 13:43:17] 2025-02-24 12:38:48,975 | INFO     | **************************************
[2025-02-24 13:43:17] 2025-02-24 12:38:48,975 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-24 13:43:17] 2025-02-24 12:38:48,975 | INFO     | **************************************
[2025-02-24 13:43:17] 2025-02-24 12:38:48,975 | INFO     | 
[2025-02-24 13:43:17] 2025-02-24 12:38:48,979 | INFO     | architecture information:
[2025-02-24 13:43:17] 2025-02-24 12:38:48,979 | INFO     | executing command: cat /etc/os-release
[2025-02-24 13:43:17] 2025-02-24 12:38:48,994 | INFO     | cat /etc/os-release:
[2025-02-24 13:43:17] NAME="CentOS Linux"
[2025-02-24 13:43:17] VERSION="7 (Core)"
[2025-02-24 13:43:17] ID="centos"
[2025-02-24 13:43:17] ID_LIKE="rhel fedora"
[2025-02-24 13:43:17] VERSION_ID="7"
[2025-02-24 13:43:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-24 13:43:17] ANSI_COLOR="0;31"
[2025-02-24 13:43:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-24 13:43:17] HOME_URL="https://www.centos.org/"
[2025-02-24 13:43:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-24 13:43:17] 
[2025-02-24 13:43:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-24 13:43:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-24 13:43:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-24 13:43:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-24 13:43:17] 
[2025-02-24 13:43:17] 2025-02-24 12:38:48,994 | INFO     | **************************************
[2025-02-24 13:43:17] 2025-02-24 12:38:49,497 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-02-24 13:43:17] 2025-02-24 12:38:49,513 | INFO     | sufficient remaining disk space (621902036992 B)
[2025-02-24 13:43:17] 2025-02-24 12:38:49,513 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-24 13:43:17] 2025-02-24 12:38:49,513 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-24 13:43:17] 2025-02-24 12:38:49,514 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-24 13:43:17] 2025-02-24 12:38:49,514 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-24 13:43:17] 2025-02-24 12:38:49,514 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-24 13:43:17] 2025-02-24 12:38:49,514 | INFO     | aborting loop
[2025-02-24 13:43:17] 2025-02-24 12:38:50,032 | INFO     | found 0 job(s) in 20 queues
[2025-02-24 13:43:17] 2025-02-24 12:38:50,032 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-24 13:43:17] 2025-02-24 12:38:50,032 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-24 13:43:17] 2025-02-24 12:38:50,070 | INFO     | all data control threads have been joined
[2025-02-24 13:43:17] 2025-02-24 12:38:50,519 | INFO     | [job] retrieve thread has finished
[2025-02-24 13:43:17] 2025-02-24 12:38:50,520 | INFO     | [job] queue monitor thread has finished
[2025-02-24 13:43:17] 2025-02-24 12:38:50,520 | INFO     | [job] job monitor thread has finished
[2025-02-24 13:43:17] 2025-02-24 12:38:50,554 | INFO     | [payload] validate_post thread has finished
[2025-02-24 13:43:17] 2025-02-24 12:38:50,842 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-24 13:43:17] 2025-02-24 12:38:50,980 | INFO     | all payload control threads have been joined
[2025-02-24 13:43:17] 2025-02-24 12:38:51,075 | INFO     | [data] control thread has finished
[2025-02-24 13:43:17] 2025-02-24 12:38:51,177 | INFO     | all job control threads have been joined
[2025-02-24 13:43:17] 2025-02-24 12:38:51,192 | INFO     | [job] validate thread has finished
[2025-02-24 13:43:17] 2025-02-24 12:38:51,266 | INFO     | [payload] failed_post thread has finished
[2025-02-24 13:43:17] 2025-02-24 12:38:51,312 | INFO     | [payload] validate_pre thread has finished
[2025-02-24 13:43:17] 2025-02-24 12:38:51,378 | INFO     | [payload] execute_payloads thread has finished
[2025-02-24 13:43:17] 2025-02-24 12:38:51,382 | INFO     | [data] copytool_in thread has finished
[2025-02-24 13:43:17] 2025-02-24 12:38:51,519 | INFO     | [data] copytool_out thread has finished
[2025-02-24 13:43:17] 2025-02-24 12:38:51,626 | INFO     | [job] create_data_payload thread has finished
[2025-02-24 13:43:17] 2025-02-24 12:38:51,974 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-24 13:43:17] 2025-02-24 12:38:51,985 | INFO     | [payload] control thread has finished
[2025-02-24 13:43:17] 2025-02-24 12:38:52,182 | INFO     | [job] control thread has finished
[2025-02-24 13:43:17] 2025-02-24 12:38:55,979 | INFO     | [data] queue_monitor thread has finished
[2025-02-24 13:43:17] 2025-02-24 12:38:56,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23119022868288)>', '<ExcThread(monitor, started 23118789707520)>']
[2025-02-24 13:43:17] 2025-02-24 12:38:57,067 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-24 13:43:17] 2025-02-24 12:38:57,067 | INFO     | [monitor] control thread has ended
[2025-02-24 13:43:17] 2025-02-24 12:39:01,680 | INFO     | all workflow threads have been joined
[2025-02-24 13:43:17] 2025-02-24 12:39:01,680 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-24 13:43:17] 2025-02-24 12:39:01,680 | INFO     | traces error code: 0
[2025-02-24 13:43:17] 2025-02-24 12:39:01,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-24 13:43:17] 2025-02-24 12:39:01,877 [wrapper] ==== pilot stdout END ====
[2025-02-24 13:43:17] 2025-02-24 12:39:01,880 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-24 13:43:17] 2025-02-24 12:39:01,882 [wrapper] pilotpid: 8892
[2025-02-24 13:43:17] 2025-02-24 12:39:01,885 [wrapper] Pilot exit status: 0
[2025-02-24 13:43:17] 2025-02-24 12:39:01,894 [wrapper] pandaids: 6521465677
[2025-02-24 13:43:17] 2025-02-24 12:39:01,955 [wrapper] cleanup supervisor_pilot  548291 8893
[2025-02-24 13:43:17] 2025-02-24 12:39:01,958 [wrapper] Test setup, not cleaning
[2025-02-24 13:43:17] 2025-02-24 12:39:01,964 [wrapper] apfmon messages muted
[2025-02-24 13:43:17] 2025-02-24 12:39:01,967 [wrapper] ==== wrapper stdout END ====
[2025-02-24 13:43:17] 2025-02-24 12:39:01,970 [wrapper] ==== wrapper stderr END ====
[2025-02-24 13:43:17]  *** Error codes and diagnostics ***
[2025-02-24 13:43:17]     "exeErrorCode": 0,
[2025-02-24 13:43:17]     "exeErrorDiag": "",
[2025-02-24 13:43:17]     "pilotErrorCode": 0,
[2025-02-24 13:43:17]     "pilotErrorDiag": "",
[2025-02-24 13:43:17]  *** Listing of results directory ***
[2025-02-24 13:43:17] total 670408
[2025-02-24 13:43:17] -rw-r--r-- 1 boinc boinc    491065 Feb 20 23:03 pilot3.tar.gz
[2025-02-24 13:43:17] -rwx------ 1 boinc boinc     35865 Feb 20 23:04 runpilot2-wrapper.sh
[2025-02-24 13:43:17] -rw-r--r-- 1 boinc boinc      5118 Feb 20 23:04 queuedata.json
[2025-02-24 13:43:17] -rw-r--r-- 1 boinc boinc       100 Feb 24 07:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-24 13:43:17] -rwxr-xr-x 1 boinc boinc      7986 Feb 24 07:13 run_atlas
[2025-02-24 13:43:17] -rw-r--r-- 1 boinc boinc       105 Feb 24 07:13 job.xml
[2025-02-24 13:43:17] -rw-r--r-- 2 boinc boinc 341355306 Feb 24 07:14 EVNT.43078917._001876.pool.root.1
[2025-02-24 13:43:17] -rw-r--r-- 1 boinc boinc      6633 Feb 24 07:14 init_data.xml
[2025-02-24 13:43:17] -rw-r--r-- 2 boinc boinc     17569 Feb 24 07:14 start_atlas.sh
[2025-02-24 13:43:17] drwxrwx--x 2 boinc boinc      4096 Feb 24 07:14 shared
[2025-02-24 13:43:17] -rw-r--r-- 2 boinc boinc    503557 Feb 24 07:14 input.tar.gz
[2025-02-24 13:43:17] -rw-r--r-- 1 boinc boinc         0 Feb 24 07:14 boinc_lockfile
[2025-02-24 13:43:17] -rw-r--r-- 1 boinc boinc      2545 Feb 24 07:14 pandaJob.out
[2025-02-24 13:43:17] -rw------- 1 boinc boinc       424 Feb 24 07:14 setup.sh.local
[2025-02-24 13:43:17] -rw------- 1 boinc boinc    987712 Feb 24 07:14 agis_schedconf.cvmfs.json
[2025-02-24 13:43:17] drwx------ 4 boinc boinc      4096 Feb 24 07:14 pilot3
[2025-02-24 13:43:17] -rw------- 1 boinc boinc 335230042 Feb 24 13:37 HITS.43078919._080886.pool.root.1
[2025-02-24 13:43:17] -rw-r--r-- 1 boinc boinc       530 Feb 24 13:38 boinc_task_state.xml
[2025-02-24 13:43:17] -rw------- 1 boinc boinc      1038 Feb 24 13:38 memory_monitor_summary.json
[2025-02-24 13:43:17] -rw------- 1 boinc boinc   1582569 Feb 24 13:38 agis_ddmendpoints.agis.ALL.json
[2025-02-24 13:43:17] -rw------- 1 boinc boinc    441426 Feb 24 13:38 log.43078919._080886.job.log.tgz.1
[2025-02-24 13:43:17] -rw------- 1 boinc boinc        95 Feb 24 13:38 pilot_heartbeat.json
[2025-02-24 13:43:17] -rw------- 1 boinc boinc      7742 Feb 24 13:38 heartbeat.json
[2025-02-24 13:43:17] -rw------- 1 boinc boinc      4225 Feb 24 13:39 pilotlog.txt
[2025-02-24 13:43:17] -rw------- 1 boinc boinc   2612428 Feb 24 13:39 log.43078919._080886.job.log.1
[2025-02-24 13:43:17] -rw------- 1 boinc boinc       357 Feb 24 13:39 output.list
[2025-02-24 13:43:17] -rw-r--r-- 1 boinc boinc       620 Feb 24 13:39 runtime_log
[2025-02-24 13:43:17] -rw------- 1 boinc boinc   3072000 Feb 24 13:39 result.tar.gz
[2025-02-24 13:43:17] -rw-r--r-- 1 boinc boinc     11424 Feb 24 13:39 runtime_log.err
[2025-02-24 13:43:17] -rw------- 1 boinc boinc       665 Feb 24 13:39 JqaNDmapT56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmNUcKDmAESBQn.diag
[2025-02-24 13:43:17] -rw-r--r-- 1 boinc boinc        27 Feb 24 13:42 wrapper_checkpoint.txt
[2025-02-24 13:43:17] -rw-r--r-- 1 boinc boinc      8192 Feb 24 13:43 boinc_mmap_file
[2025-02-24 13:43:17] -rw-r--r-- 1 boinc boinc     21822 Feb 24 13:43 stderr.txt
[2025-02-24 13:43:17] HITS file was successfully produced:
[2025-02-24 13:43:17] -rw------- 1 boinc boinc 335230042 Feb 24 13:37 shared/HITS.pool.root.1
[2025-02-24 13:43:17]  *** Contents of shared directory: ***
[2025-02-24 13:43:17] total 664252
[2025-02-24 13:43:17] -rw-r--r-- 2 boinc boinc 341355306 Feb 24 07:14 ATLAS.root_0
[2025-02-24 13:43:17] -rw-r--r-- 2 boinc boinc     17569 Feb 24 07:14 start_atlas.sh
[2025-02-24 13:43:17] -rw-r--r-- 2 boinc boinc    503557 Feb 24 07:14 input.tar.gz
[2025-02-24 13:43:17] -rw------- 1 boinc boinc 335230042 Feb 24 13:37 HITS.pool.root.1
[2025-02-24 13:43:17] -rw------- 1 boinc boinc   3072000 Feb 24 13:39 result.tar.gz
13:43:19 (3686): run_atlas exited; CPU time 88078.692389
13:43:19 (3686): called boinc_finish(0)

</stderr_txt>
]]>

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