Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:18:07 (1294314): wrapper (7.7.26015): starting
07:18:07 (1294314): wrapper: running run_atlas (--nthreads 4)
[2025-02-23 07:18:07] Arguments: --nthreads 4
[2025-02-23 07:18:07] Threads: 4
[2025-02-23 07:18:07] Checking for CVMFS
[2025-02-23 07:18:07] No cvmfs_config command found, will try listing directly
[2025-02-23 07:18:07] CVMFS is ok
[2025-02-23 07:18:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 07:18:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 07:18:07] Further information can be found at the LHC@home message board.
[2025-02-23 07:18:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 07:18:07] Checking for apptainer binary...
[2025-02-23 07:18:07] which: no apptainer in ((null))
[2025-02-23 07:18:07] apptainer is not installed, using version from CVMFS
[2025-02-23 07:18:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 07:18:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-02-23 07:18:07] apptainer works
[2025-02-23 07:18:07] Set ATHENA_PROC_NUMBER=4
[2025-02-23 07:18:07] Set ATHENA_CORE_NUMBER=4
[2025-02-23 07:18:07] Starting ATLAS job with PandaID=6521332356
[2025-02-23 07:18:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-23 14:10:26]  *** The last 200 lines of the pilot log: ***
[2025-02-23 14:10:27] 2025-02-23 13:10:08,104 | INFO     | sum of deviations: -14763664568.000048
[2025-02-23 14:10:27] 2025-02-23 13:10:08,104 | INFO     | mean x: 1740303846.0
[2025-02-23 14:10:27] 2025-02-23 13:10:08,104 | INFO     | mean y: 2378550.950617284
[2025-02-23 14:10:27] 2025-02-23 13:10:08,105 | INFO     | -- intersect: 1249700037.1375308
[2025-02-23 14:10:27] 2025-02-23 13:10:08,105 | INFO     | intersect: 1249700037.1375308
[2025-02-23 14:10:27] 2025-02-23 13:10:08,105 | INFO     | chi2: 4.438981991296288
[2025-02-23 14:10:27] 2025-02-23 13:10:08,106 | INFO     | model: linear, x: [1740291524.0, 1740291585.0, 1740291646.0, 1740291707.0, 1740291768.0, 1740291829.0, 1740291890.0, 1740291951.0, 1740292012.0, 1740292073.0, 1740
[2025-02-23 14:10:27] 2025-02-23 13:10:08,106 | INFO     | sum of square deviations: 19845209300.0
[2025-02-23 14:10:27] 2025-02-23 13:10:08,110 | INFO     | sum of deviations: 9546311571.000032
[2025-02-23 14:10:27] 2025-02-23 13:10:08,111 | INFO     | mean x: 1740303693.5
[2025-02-23 14:10:27] 2025-02-23 13:10:08,111 | INFO     | mean y: 2383421.465
[2025-02-23 14:10:27] 2025-02-23 13:10:08,111 | INFO     | -- intersect: -834769819.6607131
[2025-02-23 14:10:27] 2025-02-23 13:10:08,111 | INFO     | intersect: -834769819.6607131
[2025-02-23 14:10:27] 2025-02-23 13:10:08,112 | INFO     | chi2: 3.7580725604511787
[2025-02-23 14:10:27] 2025-02-23 13:10:08,112 | INFO     | current chi2=3.7580725604511787 (change=15.339315009166492 %)
[2025-02-23 14:10:27] 2025-02-23 13:10:08,112 | INFO     | right removable region: 399
[2025-02-23 14:10:27] 2025-02-23 13:10:08,112 | INFO     | model: linear, x: [1740291829.0, 1740291890.0, 1740291951.0, 1740292012.0, 1740292073.0, 1740292134.0, 1740292195.0, 1740292256.0, 1740292317.0, 1740292378.0, 1740
[2025-02-23 14:10:27] 2025-02-23 13:10:08,113 | INFO     | sum of square deviations: 19845209300.0
[2025-02-23 14:10:27] 2025-02-23 13:10:08,117 | INFO     | sum of deviations: -100419415913.0
[2025-02-23 14:10:27] 2025-02-23 13:10:08,117 | INFO     | mean x: 1740303998.5
[2025-02-23 14:10:27] 2025-02-23 13:10:08,117 | INFO     | mean y: 2395848.18
[2025-02-23 14:10:27] 2025-02-23 13:10:08,118 | INFO     | -- intersect: 8808567070.593283
[2025-02-23 14:10:27] 2025-02-23 13:10:08,118 | INFO     | intersect: 8808567070.593283
[2025-02-23 14:10:27] 2025-02-23 13:10:08,118 | INFO     | chi2: 2.349122032520299
[2025-02-23 14:10:27] 2025-02-23 13:10:08,119 | INFO     | current chi2=2.349122032520299 (change=47.07971248528766 %)
[2025-02-23 14:10:27] 2025-02-23 13:10:08,119 | INFO     | model: linear, x: [1740292134.0, 1740292195.0, 1740292256.0, 1740292317.0, 1740292378.0, 1740292439.0, 1740292500.0, 1740292561.0, 1740292622.0, 1740292683.0, 1740
[2025-02-23 14:10:27] 2025-02-23 13:10:08,119 | INFO     | sum of square deviations: 19110274590.0
[2025-02-23 14:10:27] 2025-02-23 13:10:08,123 | INFO     | sum of deviations: -161197281607.0
[2025-02-23 14:10:27] 2025-02-23 13:10:08,123 | INFO     | mean x: 1740304151.0
[2025-02-23 14:10:27] 2025-02-23 13:10:08,124 | INFO     | mean y: 2408459.498734177
[2025-02-23 14:10:27] 2025-02-23 13:10:08,124 | INFO     | -- intersect: 14682066618.747507
[2025-02-23 14:10:27] 2025-02-23 13:10:08,124 | INFO     | intersect: 14682066618.747507
[2025-02-23 14:10:27] 2025-02-23 13:10:08,124 | INFO     | chi2: 1.3719870477509746
[2025-02-23 14:10:27] 2025-02-23 13:10:08,125 | INFO     | current chi2=1.3719870477509746 (change=41.595752423342056 %)
[2025-02-23 14:10:27] 2025-02-23 13:10:08,125 | INFO     | model: linear, x: [1740292439.0, 1740292500.0, 1740292561.0, 1740292622.0, 1740292683.0, 1740292744.0, 1740292805.0, 1740292866.0, 1740292927.0, 1740292988.0, 1740
[2025-02-23 14:10:27] 2025-02-23 13:10:08,125 | INFO     | sum of square deviations: 18393712317.5
[2025-02-23 14:10:27] 2025-02-23 13:10:08,130 | INFO     | sum of deviations: -161533080659.5
[2025-02-23 14:10:27] 2025-02-23 13:10:08,130 | INFO     | mean x: 1740304303.5
[2025-02-23 14:10:27] 2025-02-23 13:10:08,130 | INFO     | mean y: 2408515.976923077
[2025-02-23 14:10:27] 2025-02-23 13:10:08,131 | INFO     | -- intersect: 15285713515.90794
[2025-02-23 14:10:27] 2025-02-23 13:10:08,131 | INFO     | intersect: 15285713515.90794
[2025-02-23 14:10:27] 2025-02-23 13:10:08,132 | INFO     | chi2: 1.3366660956651817
[2025-02-23 14:10:27] 2025-02-23 13:10:08,132 | INFO     | current chi2=1.3366660956651817 (change=2.5744377210916567 %)
[2025-02-23 14:10:27] 2025-02-23 13:10:08,132 | INFO     | left removable region: 30
[2025-02-23 14:10:27] 2025-02-23 13:10:08,133 | INFO     | model: linear, x: [1740293354.0, 1740293415.0, 1740293476.0, 1740293537.0, 1740293598.0, 1740293659.0, 1740293720.0, 1740293781.0, 1740293842.0, 1740293903.0, 1740
[2025-02-23 14:10:27] 2025-02-23 13:10:08,133 | INFO     | sum of square deviations: 15579529320.0
[2025-02-23 14:10:27] 2025-02-23 13:10:08,136 | INFO     | sum of deviations: -84134974923.99997
[2025-02-23 14:10:27] 2025-02-23 13:10:08,137 | INFO     | mean x: 1740304578.0
[2025-02-23 14:10:27] 2025-02-23 13:10:08,137 | INFO     | mean y: 2401986.2520325202
[2025-02-23 14:10:27] 2025-02-23 13:10:08,137 | INFO     | -- intersect: 9400662936.419964
[2025-02-23 14:10:27] 2025-02-23 13:10:08,137 | INFO     | intersect: 9400662936.419964
[2025-02-23 14:10:27] 2025-02-23 13:10:08,137 | INFO     | chi2: 0.5107615972965048
[2025-02-23 14:10:27] 2025-02-23 13:10:08,138 | INFO     | -- intersect: 9400662936.419964
[2025-02-23 14:10:27] 2025-02-23 13:10:08,138 | INFO     | current memory leak: -5.40 B/s (using 369 data points, chi2=0.51)
[2025-02-23 14:10:27] 2025-02-23 13:10:08,139 | INFO     | ..............................
[2025-02-23 14:10:27] 2025-02-23 13:10:08,139 | INFO     | . Timing measurements:
[2025-02-23 14:10:27] 2025-02-23 13:10:08,139 | INFO     | . get job = 0 s
[2025-02-23 14:10:27] 2025-02-23 13:10:08,139 | INFO     | . initial setup = 1 s
[2025-02-23 14:10:27] 2025-02-23 13:10:08,139 | INFO     | . payload setup = 6 s
[2025-02-23 14:10:27] 2025-02-23 13:10:08,139 | INFO     | . stage-in = 0 s
[2025-02-23 14:10:27] 2025-02-23 13:10:08,139 | INFO     | . payload execution = 24677 s
[2025-02-23 14:10:27] 2025-02-23 13:10:08,140 | INFO     | . stage-out = 1 s
[2025-02-23 14:10:27] 2025-02-23 13:10:08,140 | INFO     | . log creation = 0 s
[2025-02-23 14:10:27] 2025-02-23 13:10:08,140 | INFO     | ..............................
[2025-02-23 14:10:27] 2025-02-23 13:10:08,244 | INFO     | 
[2025-02-23 14:10:27] 2025-02-23 13:10:08,255 | INFO     | job summary report
[2025-02-23 14:10:27] 2025-02-23 13:10:08,255 | WARNING  | process 1305006 can no longer be monitored (due to stat problems) - aborting
[2025-02-23 14:10:27] 2025-02-23 13:10:08,255 | INFO     | --------------------------------------------------
[2025-02-23 14:10:27] 2025-02-23 13:10:08,256 | INFO     | PanDA job id: 6521332356
[2025-02-23 14:10:27] 2025-02-23 13:10:08,256 | INFO     | task id: 43078919
[2025-02-23 14:10:27] 2025-02-23 13:10:08,256 | INFO     | errors: (none)
[2025-02-23 14:10:27] 2025-02-23 13:10:08,256 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-23 14:10:27] 2025-02-23 13:10:08,256 | INFO     | pilot state: finished 
[2025-02-23 14:10:27] 2025-02-23 13:10:08,256 | INFO     | transexitcode: 0
[2025-02-23 14:10:27] 2025-02-23 13:10:08,256 | INFO     | exeerrorcode: 0
[2025-02-23 14:10:27] 2025-02-23 13:10:08,256 | INFO     | exeerrordiag: 
[2025-02-23 14:10:27] 2025-02-23 13:10:08,257 | INFO     | exitcode: 0
[2025-02-23 14:10:27] 2025-02-23 13:10:08,257 | INFO     | exitmsg: OK
[2025-02-23 14:10:27] 2025-02-23 13:10:08,257 | INFO     | cpuconsumptiontime: 94636 s
[2025-02-23 14:10:27] 2025-02-23 13:10:08,257 | INFO     | nevents: 400
[2025-02-23 14:10:27] 2025-02-23 13:10:08,257 | INFO     | neventsw: 0
[2025-02-23 14:10:27] 2025-02-23 13:10:08,257 | INFO     | pid: 1305006
[2025-02-23 14:10:27] 2025-02-23 13:10:08,257 | INFO     | pgrp: 1305006
[2025-02-23 14:10:27] 2025-02-23 13:10:08,257 | INFO     | corecount: 4
[2025-02-23 14:10:27] 2025-02-23 13:10:08,257 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6521332356/memory_monitor_summary.json (trf name=prmon)
[2025-02-23 14:10:27] 2025-02-23 13:10:08,257 | INFO     | event service: False
[2025-02-23 14:10:27] 2025-02-23 13:10:08,258 | INFO     | sizes: {0: 2382534, 1: 2383401, 6: 2383607, 12: 2383635, 24686: 2418719, 24687: 2418718, 24689: 2427865, 24690: 2427921, 24695: 2428091}
[2025-02-23 14:10:27] 2025-02-23 13:10:08,258 | INFO     | --------------------------------------------------
[2025-02-23 14:10:27] 2025-02-23 13:10:08,258 | INFO     | 
[2025-02-23 14:10:27] 2025-02-23 13:10:08,258 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-02-23 14:10:27] 2025-02-23 13:10:08,279 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-23 14:10:27] 2025-02-23 13:10:08,279 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-23 14:10:27] 2025-02-23 13:10:08,280 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-23 14:10:27] 2025-02-23 13:10:08,280 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-23 14:10:27] 2025-02-23 13:10:08,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-23 14:10:27] 2025-02-23 13:10:08,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-23 14:10:27] 2025-02-23 13:10:08,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-23 14:10:27] 2025-02-23 13:10:08,280 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-23 14:10:27] 2025-02-23 13:10:08,280 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-23 14:10:27] 2025-02-23 13:10:08,280 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-23 14:10:27] 2025-02-23 13:10:08,281 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-23 14:10:27] 2025-02-23 13:10:08,281 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-23 14:10:27] 2025-02-23 13:10:08,281 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-23 14:10:27] 2025-02-23 13:10:08,281 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-23 14:10:27] 2025-02-23 13:10:08,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-23 14:10:27] 2025-02-23 13:10:08,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-23 14:10:27] 2025-02-23 13:10:08,281 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-23 14:10:27] 2025-02-23 13:10:08,281 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-23 14:10:27] 2025-02-23 13:10:08,281 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-23 14:10:27] 2025-02-23 13:10:08,282 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-23 14:10:27] 2025-02-23 13:10:08,282 | INFO     | job 6521332356 has completed (purged errors)
[2025-02-23 14:10:27] 2025-02-23 13:10:08,282 | INFO     | overall cleanup function is called
[2025-02-23 14:10:27] 2025-02-23 13:10:08,422 | INFO     | number of running child processes to parent process 1305006: 1
[2025-02-23 14:10:27] 2025-02-23 13:10:08,422 | INFO     | maximum number of monitored processes: 6
[2025-02-23 14:10:27] 2025-02-23 13:10:08,422 | INFO     | aborting job monitoring since job object (job id=6521332356) has expired
[2025-02-23 14:10:27] 2025-02-23 13:10:09,290 | INFO     | --- collectZombieJob: --- 10, [1305006]
[2025-02-23 14:10:27] 2025-02-23 13:10:09,290 | INFO     | zombie collector waiting for pid 1305006
[2025-02-23 14:10:27] 2025-02-23 13:10:09,290 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-23 14:10:27] 2025-02-23 13:10:09,290 | INFO     | collected zombie processes
[2025-02-23 14:10:27] 2025-02-23 13:10:09,291 | INFO     | will attempt to kill all subprocesses of pid=1305006
[2025-02-23 14:10:27] 2025-02-23 13:10:09,442 | INFO     | process IDs to be killed: [1305006] (in reverse order)
[2025-02-23 14:10:27] 2025-02-23 13:10:09,552 | WARNING  | found no corresponding commands to process id(s)
[2025-02-23 14:10:27] 2025-02-23 13:10:09,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-23 14:10:27] 2025-02-23 13:10:09,563 | INFO     | did not find any defunct processes belonging to 1305006
[2025-02-23 14:10:27] 2025-02-23 13:10:09,572 | INFO     | did not find any defunct processes belonging to 1305006
[2025-02-23 14:10:27] 2025-02-23 13:10:09,573 | INFO     | ready for new job
[2025-02-23 14:10:27] 2025-02-23 13:10:09,573 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-23 14:10:27] 2025-02-23 13:10:09,576 | INFO     | **************************************
[2025-02-23 14:10:27] 2025-02-23 13:10:09,576 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-23 14:10:27] 2025-02-23 13:10:09,576 | INFO     | **************************************
[2025-02-23 14:10:27] 2025-02-23 13:10:09,576 | INFO     | 
[2025-02-23 14:10:27] 2025-02-23 13:10:09,580 | INFO     | architecture information:
[2025-02-23 14:10:27] 2025-02-23 13:10:09,580 | INFO     | executing command: cat /etc/os-release
[2025-02-23 14:10:27] 2025-02-23 13:10:09,594 | INFO     | cat /etc/os-release:
[2025-02-23 14:10:27] NAME="CentOS Linux"
[2025-02-23 14:10:27] VERSION="7 (Core)"
[2025-02-23 14:10:27] ID="centos"
[2025-02-23 14:10:27] ID_LIKE="rhel fedora"
[2025-02-23 14:10:27] VERSION_ID="7"
[2025-02-23 14:10:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-23 14:10:27] ANSI_COLOR="0;31"
[2025-02-23 14:10:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-23 14:10:27] HOME_URL="https://www.centos.org/"
[2025-02-23 14:10:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-23 14:10:27] 
[2025-02-23 14:10:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-23 14:10:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-23 14:10:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-23 14:10:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-23 14:10:27] 
[2025-02-23 14:10:27] 2025-02-23 13:10:09,594 | INFO     | **************************************
[2025-02-23 14:10:27] 2025-02-23 13:10:10,097 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-02-23 14:10:27] 2025-02-23 13:10:10,116 | INFO     | sufficient remaining disk space (637510090752 B)
[2025-02-23 14:10:27] 2025-02-23 13:10:10,116 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-23 14:10:27] 2025-02-23 13:10:10,116 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-23 14:10:27] 2025-02-23 13:10:10,117 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-23 14:10:27] 2025-02-23 13:10:10,117 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-23 14:10:27] 2025-02-23 13:10:10,117 | INFO     | aborting loop
[2025-02-23 14:10:27] 2025-02-23 13:10:10,263 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-23 14:10:27] 2025-02-23 13:10:10,902 | INFO     | found 0 job(s) in 20 queues
[2025-02-23 14:10:27] 2025-02-23 13:10:10,902 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-23 14:10:27] 2025-02-23 13:10:10,902 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-23 14:10:27] 2025-02-23 13:10:11,021 | INFO     | all data control threads have been joined
[2025-02-23 14:10:27] 2025-02-23 13:10:11,038 | INFO     | all job control threads have been joined
[2025-02-23 14:10:27] 2025-02-23 13:10:11,119 | INFO     | [job] queue monitor thread has finished
[2025-02-23 14:10:27] 2025-02-23 13:10:11,122 | INFO     | [job] retrieve thread has finished
[2025-02-23 14:10:27] 2025-02-23 13:10:11,123 | INFO     | [job] job monitor thread has finished
[2025-02-23 14:10:27] 2025-02-23 13:10:11,473 | INFO     | [job] create_data_payload thread has finished
[2025-02-23 14:10:27] 2025-02-23 13:10:11,512 | INFO     | all payload control threads have been joined
[2025-02-23 14:10:27] 2025-02-23 13:10:11,709 | INFO     | [payload] validate_pre thread has finished
[2025-02-23 14:10:27] 2025-02-23 13:10:11,901 | INFO     | [data] copytool_in thread has finished
[2025-02-23 14:10:27] 2025-02-23 13:10:11,951 | INFO     | [payload] validate_post thread has finished
[2025-02-23 14:10:27] 2025-02-23 13:10:12,026 | INFO     | [data] control thread has finished
[2025-02-23 14:10:27] 2025-02-23 13:10:12,042 | INFO     | [job] control thread has finished
[2025-02-23 14:10:27] 2025-02-23 13:10:12,080 | INFO     | [payload] failed_post thread has finished
[2025-02-23 14:10:27] 2025-02-23 13:10:12,269 | INFO     | [data] copytool_out thread has finished
[2025-02-23 14:10:27] 2025-02-23 13:10:12,288 | INFO     | [payload] execute_payloads thread has finished
[2025-02-23 14:10:27] 2025-02-23 13:10:12,517 | INFO     | [payload] control thread has finished
[2025-02-23 14:10:27] 2025-02-23 13:10:12,582 | INFO     | [job] validate thread has finished
[2025-02-23 14:10:27] 2025-02-23 13:10:13,294 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-23 14:10:27] 2025-02-23 13:10:17,299 | INFO     | [data] queue_monitor thread has finished
[2025-02-23 14:10:27] 2025-02-23 13:10:20,417 | INFO     | job.realtimelogging is not enabled
[2025-02-23 14:10:27] 2025-02-23 13:10:21,423 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-23 14:10:27] 2025-02-23 13:10:21,680 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22446574667584)>', '<ExcThread(monitor, started 22446344214272)>']
[2025-02-23 14:10:27] 2025-02-23 13:10:21,957 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-23 14:10:27] 2025-02-23 13:10:21,957 | INFO     | [monitor] control thread has ended
[2025-02-23 14:10:27] 2025-02-23 13:10:26,705 | INFO     | all workflow threads have been joined
[2025-02-23 14:10:27] 2025-02-23 13:10:26,706 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-23 14:10:27] 2025-02-23 13:10:26,706 | INFO     | traces error code: 0
[2025-02-23 14:10:27] 2025-02-23 13:10:26,706 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-23 14:10:27] 2025-02-23 13:10:26,847 [wrapper] ==== pilot stdout END ====
[2025-02-23 14:10:27] 2025-02-23 13:10:26,850 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-23 14:10:27] 2025-02-23 13:10:26,853 [wrapper] pilotpid: 1298044
[2025-02-23 14:10:27] 2025-02-23 13:10:26,856 [wrapper] Pilot exit status: 0
[2025-02-23 14:10:27] 2025-02-23 13:10:26,868 [wrapper] pandaids: 6521332356
[2025-02-23 14:10:27] 2025-02-23 13:10:26,930 [wrapper] cleanup supervisor_pilot 2125714 1298045
[2025-02-23 14:10:27] 2025-02-23 13:10:26,932 [wrapper] Test setup, not cleaning
[2025-02-23 14:10:27] 2025-02-23 13:10:26,938 [wrapper] apfmon messages muted
[2025-02-23 14:10:27] 2025-02-23 13:10:26,940 [wrapper] ==== wrapper stdout END ====
[2025-02-23 14:10:27] 2025-02-23 13:10:26,943 [wrapper] ==== wrapper stderr END ====
[2025-02-23 14:10:27]  *** Error codes and diagnostics ***
[2025-02-23 14:10:27]     "exeErrorCode": 0,
[2025-02-23 14:10:27]     "exeErrorDiag": "",
[2025-02-23 14:10:27]     "pilotErrorCode": 0,
[2025-02-23 14:10:27]     "pilotErrorDiag": "",
[2025-02-23 14:10:27]  *** Listing of results directory ***
[2025-02-23 14:10:27] total 670784
[2025-02-23 14:10:27] -rw-r--r-- 1 boinc boinc    491065 Feb 20 21:34 pilot3.tar.gz
[2025-02-23 14:10:27] -rwx------ 1 boinc boinc     35865 Feb 20 21:36 runpilot2-wrapper.sh
[2025-02-23 14:10:27] -rw-r--r-- 1 boinc boinc      5118 Feb 20 21:37 queuedata.json
[2025-02-23 14:10:27] -rw-r--r-- 1 boinc boinc       100 Feb 23 07:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-23 14:10:27] -rwxr-xr-x 1 boinc boinc      7986 Feb 23 07:18 run_atlas
[2025-02-23 14:10:27] -rw-r--r-- 1 boinc boinc       105 Feb 23 07:18 job.xml
[2025-02-23 14:10:27] -rw-r--r-- 1 boinc boinc      6634 Feb 23 07:18 init_data.xml
[2025-02-23 14:10:27] -rw-r--r-- 2 boinc boinc 345308765 Feb 23 07:18 EVNT.43078917._001657.pool.root.1
[2025-02-23 14:10:27] -rw-r--r-- 2 boinc boinc    503561 Feb 23 07:18 input.tar.gz
[2025-02-23 14:10:27] -rw-r--r-- 2 boinc boinc     17569 Feb 23 07:18 start_atlas.sh
[2025-02-23 14:10:27] drwxrwx--x 2 boinc boinc      4096 Feb 23 07:18 shared
[2025-02-23 14:10:27] -rw-r--r-- 1 boinc boinc         0 Feb 23 07:18 boinc_lockfile
[2025-02-23 14:10:27] -rw-r--r-- 1 boinc boinc      2547 Feb 23 07:18 pandaJob.out
[2025-02-23 14:10:27] -rw------- 1 boinc boinc       424 Feb 23 07:18 setup.sh.local
[2025-02-23 14:10:27] -rw------- 1 boinc boinc    987744 Feb 23 07:18 agis_schedconf.cvmfs.json
[2025-02-23 14:10:27] drwx------ 4 boinc boinc      4096 Feb 23 07:18 pilot3
[2025-02-23 14:10:27] -rw------- 1 boinc boinc 331397352 Feb 23 14:09 HITS.43078919._080298.pool.root.1
[2025-02-23 14:10:27] -rw-r--r-- 1 boinc boinc       531 Feb 23 14:09 boinc_task_state.xml
[2025-02-23 14:10:27] -rw------- 1 boinc boinc        95 Feb 23 14:09 pilot_heartbeat.json
[2025-02-23 14:10:27] -rw------- 1 boinc boinc      1037 Feb 23 14:09 memory_monitor_summary.json
[2025-02-23 14:10:27] -rw------- 1 boinc boinc   1582569 Feb 23 14:10 agis_ddmendpoints.agis.ALL.json
[2025-02-23 14:10:27] -rw-r--r-- 1 boinc boinc      8192 Feb 23 14:10 boinc_mmap_file
[2025-02-23 14:10:27] -rw-r--r-- 1 boinc boinc        28 Feb 23 14:10 wrapper_checkpoint.txt
[2025-02-23 14:10:27] -rw------- 1 boinc boinc    468925 Feb 23 14:10 log.43078919._080298.job.log.tgz.1
[2025-02-23 14:10:27] -rw------- 1 boinc boinc      7742 Feb 23 14:10 heartbeat.json
[2025-02-23 14:10:27] -rw------- 1 boinc boinc      4297 Feb 23 14:10 pilotlog.txt
[2025-02-23 14:10:27] -rw------- 1 boinc boinc   2713637 Feb 23 14:10 log.43078919._080298.job.log.1
[2025-02-23 14:10:27] -rw------- 1 boinc boinc       357 Feb 23 14:10 output.list
[2025-02-23 14:10:27] -rw-r--r-- 1 boinc boinc       620 Feb 23 14:10 runtime_log
[2025-02-23 14:10:27] -rw------- 1 boinc boinc   3205120 Feb 23 14:10 result.tar.gz
[2025-02-23 14:10:27] -rw-r--r-- 1 boinc boinc     11424 Feb 23 14:10 runtime_log.err
[2025-02-23 14:10:27] -rw------- 1 boinc boinc       666 Feb 23 14:10 elLODm7SS56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmnOcKDmGpZ68m.diag
[2025-02-23 14:10:27] -rw-r--r-- 1 boinc boinc     21339 Feb 23 14:10 stderr.txt
[2025-02-23 14:10:27] HITS file was successfully produced:
[2025-02-23 14:10:27] -rw------- 1 boinc boinc 331397352 Feb 23 14:09 shared/HITS.pool.root.1
[2025-02-23 14:10:27]  *** Contents of shared directory: ***
[2025-02-23 14:10:27] total 664500
[2025-02-23 14:10:27] -rw-r--r-- 2 boinc boinc 345308765 Feb 23 07:18 ATLAS.root_0
[2025-02-23 14:10:27] -rw-r--r-- 2 boinc boinc    503561 Feb 23 07:18 input.tar.gz
[2025-02-23 14:10:27] -rw-r--r-- 2 boinc boinc     17569 Feb 23 07:18 start_atlas.sh
[2025-02-23 14:10:27] -rw------- 1 boinc boinc 331397352 Feb 23 14:09 HITS.pool.root.1
[2025-02-23 14:10:27] -rw------- 1 boinc boinc   3205120 Feb 23 14:10 result.tar.gz
14:10:28 (1294314): run_atlas exited; CPU time 94732.171032
14:10:28 (1294314): called boinc_finish(0)

</stderr_txt>
]]>

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