Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-20 18:34:18 (18700): Detected: vboxwrapper 26206
2025-02-20 18:34:18 (18700): Detected: BOINC client v8.0.2
2025-02-20 18:34:19 (18700): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-02-20 18:34:20 (18700): Successfully copied 'init_data.xml' to the shared directory.
2025-02-20 18:34:20 (18700): Create VM. (boinc_b9937c5e4fdcf8f1, slot#3)
2025-02-20 18:34:21 (18700): Setting Memory Size for VM. (4800MB)
2025-02-20 18:34:21 (18700): Setting CPU Count for VM. (8)
2025-02-20 18:34:21 (18700): Setting Chipset Options for VM.
2025-02-20 18:34:22 (18700): Setting Graphics Controller Options for VM.
2025-02-20 18:34:22 (18700): Setting Boot Options for VM.
2025-02-20 18:34:22 (18700): Setting Network Configuration for NAT.
2025-02-20 18:34:22 (18700): Enabling VM Network Access.
2025-02-20 18:34:23 (18700): Disabling USB Support for VM.
2025-02-20 18:34:23 (18700): Disabling COM Port Support for VM.
2025-02-20 18:34:23 (18700): Disabling LPT Port Support for VM.
2025-02-20 18:34:23 (18700): Disabling Audio Support for VM.
2025-02-20 18:34:24 (18700): Disabling Clipboard Support for VM.
2025-02-20 18:34:24 (18700): Disabling Drag and Drop Support for VM.
2025-02-20 18:34:24 (18700): Adding storage controller(s) to VM.
2025-02-20 18:34:24 (18700): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-20 18:34:27 (18700): Adding VirtualBox Guest Additions to VM.
2025-02-20 18:34:28 (18700): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-20 18:34:28 (18700): forwarding host port 55487 to guest port 80
2025-02-20 18:34:28 (18700): Enabling remote desktop for VM.
2025-02-20 18:34:28 (18700): Required extension pack not installed, remote desktop not enabled.
2025-02-20 18:34:28 (18700): Enabling shared directory for VM.
2025-02-20 18:34:29 (18700): Starting VM using VBoxManage interface. (boinc_b9937c5e4fdcf8f1, slot#3)
2025-02-20 18:34:34 (18700): Successfully started VM. (PID = '7364')
2025-02-20 18:34:34 (18700): Reporting VM Process ID to BOINC.
2025-02-20 18:34:34 (18700): Guest Log: BIOS: VirtualBox 7.1.6
2025-02-20 18:34:34 (18700): Guest Log: CPUID EDX: 0x178bfbff
2025-02-20 18:34:34 (18700): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-20 18:34:34 (18700): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-20 18:34:34 (18700): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-20 18:34:34 (18700): Detected: Web Application Enabled (http://localhost:55487)
2025-02-20 18:34:34 (18700): Preference change detected
2025-02-20 18:34:34 (18700): Setting CPU throttle for VM. (60%)
2025-02-20 18:34:35 (18700): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-20 18:34:36 (18700): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-20 18:34:36 (18700): Guest Log: BIOS: Booting from Hard Disk...
2025-02-20 18:34:39 (18700): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-20 18:34:39 (18700): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-20 18:34:39 (18700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-20 18:34:45 (18700): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-20 18:34:45 (18700): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-20 18:34:50 (18700): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-20 18:34:50 (18700): Guest Log: 00:00:00.000120 main     Log opened 2025-02-20T18:34:48.093158000Z
2025-02-20 18:34:50 (18700): Guest Log: 00:00:00.000213 main     OS Product: Linux
2025-02-20 18:34:50 (18700): Guest Log: 00:00:00.000231 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-20 18:34:50 (18700): Guest Log: 00:00:00.000246 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-20 18:34:50 (18700): Guest Log: 00:00:00.000262 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-20 18:34:50 (18700): Guest Log: 00:00:00.000263 main     Process ID: 1373
2025-02-20 18:34:50 (18700): Guest Log: 00:00:00.000263 main     Package type: LINUX_64BITS_GENERIC
2025-02-20 18:34:50 (18700): Guest Log: 00:00:00.000733 main     5.2.32 r132073 started. Verbose level = 0
2025-02-20 18:34:50 (18700): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-20 18:34:50 (18700): Guest Log: [INFO] Mounting shared directory
2025-02-20 18:34:50 (18700): Guest Log: [INFO] Checking for init_data.xml
2025-02-20 18:34:55 (18700): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-20 18:34:55 (18700): Guest Log: [INFO] Detected branch: prod
2025-02-20 18:34:55 (18700): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-20 18:34:55 (18700): Guest Log: Copying input files
2025-02-20 18:34:57 (18700): Guest Log: Copied input files into RunAtlas.
2025-02-20 18:34:57 (18700): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-20 18:34:57 (18700): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-20 18:34:57 (18700): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-20 18:34:57 (18700): Guest Log: Further information can be found at the LHC@home message board.
2025-02-20 18:35:00 (18700): Guest Log: 00:00:10.006351 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 012 193 574 000ns (GuestNow=1 740 094 500 288 454 000 ns GuestLast=1 740 076 488 094 880 000 ns fSetTimeLastLoop=true )
2025-02-20 18:35:07 (18700): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-20 18:35:08 (18700): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-20 18:35:08 (18700): Guest Log: 2.6.3.0 1656 0 32040 142883 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-20 18:35:08 (18700): Guest Log: copied the webapp to /var/www
2025-02-20 18:35:08 (18700): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-20 18:35:08 (18700): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-20 18:35:09 (18700): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-20 18:35:09 (18700): Guest Log:  *** Starting ATLAS job. (PandaID=6521331917 taskID=43205075) ***
2025-02-20 20:14:37 (18700): Status Report: Elapsed Time: '6000.000000'
2025-02-20 20:14:37 (18700): Status Report: CPU Time: '22617.125000'
2025-02-20 20:25:15 (18700): VM state change detected. (old = 'running', new = 'paused')
2025-02-20 20:28:17 (18700): VM state change detected. (old = 'paused', new = 'running')
2025-02-20 20:51:28 (18700): VM state change detected. (old = 'running', new = 'paused')
2025-02-20 20:54:29 (18700): VM state change detected. (old = 'paused', new = 'running')
2025-02-20 20:57:38 (18700): VM state change detected. (old = 'running', new = 'paused')
2025-02-20 21:00:38 (18700): VM state change detected. (old = 'paused', new = 'running')
2025-02-20 22:03:46 (18700): Status Report: Elapsed Time: '12000.000000'
2025-02-20 22:03:46 (18700): Status Report: CPU Time: '51324.109375'
2025-02-20 23:14:29 (18700): Guest Log:  *** Job finished ***
2025-02-20 23:14:29 (18700): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-20 23:14:29 (18700): Guest Log: 2025-02-21 04:05:22,221 | INFO     | [payload] validate_post thread has finished
2025-02-20 23:14:29 (18700): Guest Log: 2025-02-21 04:05:23,127 | INFO     | [data] copytool_out thread has finished
2025-02-20 23:14:29 (18700): Guest Log: 2025-02-21 04:05:24,591 | INFO     | [data] queue_monitor thread has finished
2025-02-20 23:14:29 (18700): Guest Log: 2025-02-21 04:05:25,790 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140459506370368)>', '<ExcThread(monitor, started 140458718131968)>']
2025-02-20 23:14:29 (18700): Guest Log: 2025-02-21 04:05:26,265 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-20 23:14:29 (18700): Guest Log: 2025-02-21 04:05:26,265 | INFO     | [monitor] control thread has ended
2025-02-20 23:14:29 (18700): Guest Log: 2025-02-21 04:05:30,830 | INFO     | all workflow threads have been joined
2025-02-20 23:14:29 (18700): Guest Log: 2025-02-21 04:05:30,831 | INFO     | end of generic workflow (traces error code: 0)
2025-02-20 23:14:29 (18700): Guest Log: 2025-02-21 04:05:30,831 | INFO     | traces error code: 0
2025-02-20 23:14:29 (18700): Guest Log: 2025-02-21 04:05:30,831 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-20 23:14:29 (18700): Guest Log: 2025-02-21 04:05:31,089 [wrapper] ==== pilot stdout END ====
2025-02-20 23:14:29 (18700): Guest Log: 2025-02-21 04:05:31,092 [wrapper] ==== wrapper stdout RESUME ====
2025-02-20 23:14:29 (18700): Guest Log: 2025-02-21 04:05:31,096 [wrapper] pilotpid: 6023
2025-02-20 23:14:29 (18700): Guest Log: 2025-02-21 04:05:31,099 [wrapper] Pilot exit status: 0
2025-02-20 23:14:29 (18700): Guest Log: 2025-02-21 04:05:31,205 [wrapper] pandaids: 6521331917
2025-02-20 23:14:29 (18700): Guest Log: 2025-02-21 04:05:31,226 [wrapper] cleanup supervisor_pilot 15940 6024
2025-02-20 23:14:29 (18700): Guest Log: 2025-02-21 04:05:31,229 [wrapper] Test setup, not cleaning
2025-02-20 23:14:29 (18700): Guest Log: 2025-02-21 04:05:31,235 [wrapper] apfmon messages muted
2025-02-20 23:14:29 (18700): Guest Log: 2025-02-21 04:05:31,238 [wrapper] ==== wrapper stdout END ====
2025-02-20 23:14:29 (18700): Guest Log: 2025-02-21 04:05:31,241 [wrapper] ==== wrapper stderr END ====
2025-02-20 23:14:29 (18700): Guest Log:  *** Error codes and diagnostics ***
2025-02-20 23:14:29 (18700): Guest Log:     "exeErrorCode": 0,
2025-02-20 23:14:29 (18700): Guest Log:     "exeErrorDiag": "",
2025-02-20 23:14:29 (18700): Guest Log:     "pilotErrorCode": 0,
2025-02-20 23:14:29 (18700): Guest Log:     "pilotErrorDiag": "",
2025-02-20 23:14:29 (18700): Guest Log:  *** Listing of results directory ***
2025-02-20 23:14:29 (18700): Guest Log: total 322716
2025-02-20 23:14:29 (18700): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 20 19:48 pilot3.tar.gz
2025-02-20 23:14:29 (18700): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 20 19:53 queuedata.json
2025-02-20 23:14:29 (18700): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 20 19:53 runpilot2-wrapper.sh
2025-02-20 23:14:29 (18700): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 20 23:34 start_atlas.sh
2025-02-20 23:14:29 (18700): Guest Log: -rwxr-xr-x. 1 atlas atlas    503562 Feb 20 23:34 input.tar.gz
2025-02-20 23:14:29 (18700): Guest Log: -rwxr-xr-x. 1 atlas atlas     11891 Feb 20 23:34 init_data.xml
2025-02-20 23:14:29 (18700): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 20 23:34 EVNT.43092757._000491.pool.root.1 -> /data/./ATLAS.root_0
2025-02-20 23:14:29 (18700): Guest Log: -rw-r--r--. 1 atlas atlas      2555 Feb 20 23:35 pandaJob.out
2025-02-20 23:14:29 (18700): Guest Log: -rw-------. 1 atlas atlas       424 Feb 20 23:35 setup.sh.local
2025-02-20 23:14:29 (18700): Guest Log: -rw-------. 1 atlas atlas    994752 Feb 20 23:36 agis_schedconf.cvmfs.json
2025-02-20 23:14:29 (18700): Guest Log: drwx------. 4 atlas atlas      4096 Feb 20 23:36 pilot3
2025-02-20 23:14:29 (18700): Guest Log: -rw-------. 1 atlas atlas 323514715 Feb 21 04:04 HITS.43205075._055670.pool.root.1
2025-02-20 23:14:29 (18700): Guest Log: -rw-------. 1 atlas atlas        95 Feb 21 04:04 pilot_heartbeat.json
2025-02-20 23:14:29 (18700): Guest Log: -rw-------. 1 atlas atlas      1028 Feb 21 04:05 memory_monitor_summary.json
2025-02-20 23:14:29 (18700): Guest Log: -rw-------. 1 atlas atlas   1586690 Feb 21 04:05 agis_ddmendpoints.agis.ALL.json
2025-02-20 23:14:29 (18700): Guest Log: -rw-------. 1 atlas atlas    390211 Feb 21 04:05 log.43205075._055670.job.log.tgz.1
2025-02-20 23:14:29 (18700): Guest Log: -rw-------. 1 atlas atlas      7685 Feb 21 04:05 heartbeat.json
2025-02-20 23:14:29 (18700): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 21 04:05 pilotlog.txt
2025-02-20 23:14:29 (18700): Guest Log: -rw-------. 1 atlas atlas   1212228 Feb 21 04:05 log.43205075._055670.job.log.1
2025-02-20 23:14:29 (18700): Guest Log: -rw-------. 1 atlas atlas       357 Feb 21 04:05 output.list
2025-02-20 23:14:29 (18700): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 21 04:05 runtime_log
2025-02-20 23:14:29 (18700): Guest Log: -rw-------. 1 atlas atlas   1617920 Feb 21 04:05 result.tar.gz
2025-02-20 23:14:29 (18700): Guest Log: -rw-------. 1 atlas atlas       669 Feb 21 04:05 tyyMDmzmR56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm5rqKDmh2TKan.diag
2025-02-20 23:14:29 (18700): Guest Log: -rw-r--r--. 1 atlas atlas     10959 Feb 21 04:05 runtime_log.err
2025-02-20 23:14:29 (18700): Guest Log: Looking for outputfile HITS.43205075._055670.pool.root.1
2025-02-20 23:14:29 (18700): Guest Log: HITS file was successfully produced
2025-02-20 23:14:29 (18700): Guest Log: -rw-------. 1 atlas atlas 323514715 Feb 21 04:04 /home/atlas/RunAtlas/HITS.43205075._055670.pool.root.1
2025-02-20 23:14:31 (18700): Guest Log: Successfully finished the ATLAS job!
2025-02-20 23:14:31 (18700): Guest Log: Copying the results back to the shared directory!
2025-02-20 23:14:31 (18700): Guest Log:  *** Contents of shared directory: ***
2025-02-20 23:14:31 (18700): Guest Log: total 653624
2025-02-20 23:14:31 (18700): Guest Log: -rwxrwxrwx. 1 root root 343634465 Feb 20 23:34 ATLAS.root_0
2025-02-20 23:14:31 (18700): Guest Log: -rwxrwxrwx. 1 root root 323514715 Feb 21  2025 HITS.pool.root.1
2025-02-20 23:14:31 (18700): Guest Log: -rwxrwxrwx. 1 root root     11891 Feb 20 23:34 init_data.xml
2025-02-20 23:14:31 (18700): Guest Log: -rwxrwxrwx. 1 root root    503562 Feb 20 23:09 input.tar.gz
2025-02-20 23:14:31 (18700): Guest Log: -rwxrwxrwx. 1 root root   1617920 Feb 21  2025 result.tar.gz
2025-02-20 23:14:31 (18700): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 20 23:09 start_atlas.sh
2025-02-20 23:14:31 (18700): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-20 23:14:31 (18700): VM Completion File Detected.
2025-02-20 23:14:31 (18700): Powering off VM.
2025-02-20 23:14:32 (18700): Successfully stopped VM.
2025-02-20 23:14:32 (18700): Deregistering VM. (boinc_b9937c5e4fdcf8f1, slot#3)
2025-02-20 23:14:32 (18700): Removing network bandwidth throttle group from VM.
2025-02-20 23:14:32 (18700): Removing VM from VirtualBox.
23:14:37 (18700): called boinc_finish(0)

</stderr_txt>
]]>

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