Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:05:56 (2943753): wrapper (7.7.26015): starting
09:05:56 (2943753): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 09:05:56] Arguments: --nthreads 4
[2025-02-22 09:05:56] Threads: 4
[2025-02-22 09:05:56] Checking for CVMFS
[2025-02-22 09:05:56] No cvmfs_config command found, will try listing directly
[2025-02-22 09:05:56] CVMFS is ok
[2025-02-22 09:05:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 09:05:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 09:05:56] Further information can be found at the LHC@home message board.
[2025-02-22 09:05:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 09:05:56] Checking for apptainer binary...
[2025-02-22 09:05:56] which: no apptainer in ((null))
[2025-02-22 09:05:56] apptainer is not installed, using version from CVMFS
[2025-02-22 09:05:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 09:05:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-02-22 09:05:56] apptainer works
[2025-02-22 09:05:56] Set ATHENA_PROC_NUMBER=4
[2025-02-22 09:05:56] Set ATHENA_CORE_NUMBER=4
[2025-02-22 09:05:57] Starting ATLAS job with PandaID=6521124696
[2025-02-22 09:05:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 15:27:19]  *** The last 200 lines of the pilot log: ***
[2025-02-22 15:27:19] 2025-02-22 14:26:59,754 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-22 15:27:19] 2025-02-22 14:26:59,754 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-22 15:27:19] 2025-02-22 14:26:59,761 | INFO     | fitting pss+swap vs Time
[2025-02-22 15:27:19] 2025-02-22 14:26:59,762 | INFO     | model: linear, x: [1740211586.0, 1740211647.0, 1740211708.0, 1740211769.0, 1740211830.0, 1740211891.0, 1740211952.0, 1740212013.0, 1740212074.0, 1740212135.0, 1740
[2025-02-22 15:27:19] 2025-02-22 14:26:59,763 | INFO     | sum of square deviations: 16351934500.0
[2025-02-22 15:27:19] 2025-02-22 14:26:59,766 | INFO     | sum of deviations: 180188054085.99997
[2025-02-22 15:27:19] 2025-02-22 14:26:59,766 | INFO     | mean x: 1740222993.0
[2025-02-22 15:27:19] 2025-02-22 14:26:59,766 | INFO     | mean y: 2335594.1466666665
[2025-02-22 15:27:19] 2025-02-22 14:26:59,766 | INFO     | -- intersect: -19173829451.30314
[2025-02-22 15:27:19] 2025-02-22 14:26:59,766 | INFO     | intersect: -19173829451.30314
[2025-02-22 15:27:19] 2025-02-22 14:26:59,767 | INFO     | chi2: 5.095524083983806
[2025-02-22 15:27:19] 2025-02-22 14:26:59,767 | INFO     | model: linear, x: [1740211586.0, 1740211647.0, 1740211708.0, 1740211769.0, 1740211830.0, 1740211891.0, 1740211952.0, 1740212013.0, 1740212074.0, 1740212135.0, 1740
[2025-02-22 15:27:19] 2025-02-22 14:26:59,768 | INFO     | sum of square deviations: 15706536352.5
[2025-02-22 15:27:19] 2025-02-22 14:26:59,771 | INFO     | sum of deviations: 201386375664.5
[2025-02-22 15:27:19] 2025-02-22 14:26:59,771 | INFO     | mean x: 1740222840.5
[2025-02-22 15:27:19] 2025-02-22 14:26:59,771 | INFO     | mean y: 2340542.1972972974
[2025-02-22 15:27:19] 2025-02-22 14:26:59,771 | INFO     | -- intersect: -22310482783.81208
[2025-02-22 15:27:19] 2025-02-22 14:26:59,771 | INFO     | intersect: -22310482783.81208
[2025-02-22 15:27:19] 2025-02-22 14:26:59,772 | INFO     | chi2: 4.327325761920104
[2025-02-22 15:27:19] 2025-02-22 14:26:59,772 | INFO     | current chi2=4.327325761920104 (change=15.07594330636753 %)
[2025-02-22 15:27:19] 2025-02-22 14:26:59,772 | INFO     | right removable region: 369
[2025-02-22 15:27:19] 2025-02-22 14:26:59,772 | INFO     | model: linear, x: [1740211891.0, 1740211952.0, 1740212013.0, 1740212074.0, 1740212135.0, 1740212196.0, 1740212257.0, 1740212318.0, 1740212379.0, 1740212440.0, 1740
[2025-02-22 15:27:19] 2025-02-22 14:26:59,773 | INFO     | sum of square deviations: 15706536352.5
[2025-02-22 15:27:19] 2025-02-22 14:26:59,776 | INFO     | sum of deviations: 89063794474.5
[2025-02-22 15:27:19] 2025-02-22 14:26:59,776 | INFO     | mean x: 1740223145.5
[2025-02-22 15:27:19] 2025-02-22 14:26:59,776 | INFO     | mean y: 2357094.8027027026
[2025-02-22 15:27:19] 2025-02-22 14:26:59,776 | INFO     | -- intersect: -9865564965.932865
[2025-02-22 15:27:19] 2025-02-22 14:26:59,776 | INFO     | intersect: -9865564965.932865
[2025-02-22 15:27:19] 2025-02-22 14:26:59,777 | INFO     | chi2: 2.5500466667831327
[2025-02-22 15:27:19] 2025-02-22 14:26:59,777 | INFO     | current chi2=2.5500466667831327 (change=49.955164086096445 %)
[2025-02-22 15:27:19] 2025-02-22 14:26:59,777 | INFO     | model: linear, x: [1740212196.0, 1740212257.0, 1740212318.0, 1740212379.0, 1740212440.0, 1740212501.0, 1740212562.0, 1740212623.0, 1740212684.0, 1740212745.0, 1740
[2025-02-22 15:27:19] 2025-02-22 14:26:59,778 | INFO     | sum of square deviations: 15078347830.0
[2025-02-22 15:27:19] 2025-02-22 14:26:59,781 | INFO     | sum of deviations: 13198660402.0
[2025-02-22 15:27:19] 2025-02-22 14:26:59,781 | INFO     | mean x: 1740223298.0
[2025-02-22 15:27:19] 2025-02-22 14:26:59,781 | INFO     | mean y: 2375514.01369863
[2025-02-22 15:27:19] 2025-02-22 14:26:59,781 | INFO     | -- intersect: -1520909171.6102731
[2025-02-22 15:27:19] 2025-02-22 14:26:59,782 | INFO     | intersect: -1520909171.6102731
[2025-02-22 15:27:19] 2025-02-22 14:26:59,782 | INFO     | chi2: 0.9224304551274695
[2025-02-22 15:27:19] 2025-02-22 14:26:59,782 | INFO     | current chi2=0.9224304551274695 (change=63.82691865435116 %)
[2025-02-22 15:27:19] 2025-02-22 14:26:59,783 | INFO     | model: linear, x: [1740212501.0, 1740212562.0, 1740212623.0, 1740212684.0, 1740212745.0, 1740212806.0, 1740212867.0, 1740212928.0, 1740212989.0, 1740213050.0, 1740
[2025-02-22 15:27:19] 2025-02-22 14:26:59,783 | INFO     | sum of square deviations: 14467136370.0
[2025-02-22 15:27:19] 2025-02-22 14:26:59,786 | INFO     | sum of deviations: -4714445969.5
[2025-02-22 15:27:19] 2025-02-22 14:26:59,786 | INFO     | mean x: 1740223450.5
[2025-02-22 15:27:19] 2025-02-22 14:26:59,786 | INFO     | mean y: 2379962.6416666666
[2025-02-22 15:27:19] 2025-02-22 14:26:59,786 | INFO     | -- intersect: 569471418.919901
[2025-02-22 15:27:19] 2025-02-22 14:26:59,786 | INFO     | intersect: 569471418.919901
[2025-02-22 15:27:19] 2025-02-22 14:26:59,787 | INFO     | chi2: 0.7998470939183254
[2025-02-22 15:27:19] 2025-02-22 14:26:59,787 | INFO     | current chi2=0.7998470939183254 (change=13.289171072761729 %)
[2025-02-22 15:27:19] 2025-02-22 14:26:59,787 | INFO     | left removable region: 30
[2025-02-22 15:27:19] 2025-02-22 14:26:59,787 | INFO     | model: linear, x: [1740213416.0, 1740213477.0, 1740213538.0, 1740213599.0, 1740213660.0, 1740213721.0, 1740213782.0, 1740213843.0, 1740213904.0, 1740213965.0, 1740
[2025-02-22 15:27:19] 2025-02-22 14:26:59,788 | INFO     | sum of square deviations: 12080189290.0
[2025-02-22 15:27:19] 2025-02-22 14:26:59,791 | INFO     | sum of deviations: 9952787144.999998
[2025-02-22 15:27:19] 2025-02-22 14:26:59,791 | INFO     | mean x: 1740223725.0
[2025-02-22 15:27:19] 2025-02-22 14:26:59,791 | INFO     | mean y: 2387904.03539823
[2025-02-22 15:27:19] 2025-02-22 14:26:59,791 | INFO     | -- intersect: -1431370781.678376
[2025-02-22 15:27:19] 2025-02-22 14:26:59,791 | INFO     | intersect: -1431370781.678376
[2025-02-22 15:27:19] 2025-02-22 14:26:59,791 | INFO     | chi2: 0.0012174873879000068
[2025-02-22 15:27:19] 2025-02-22 14:26:59,792 | INFO     | -- intersect: -1431370781.678376
[2025-02-22 15:27:19] 2025-02-22 14:26:59,792 | INFO     | current memory leak: 0.82 B/s (using 339 data points, chi2=0.00)
[2025-02-22 15:27:19] 2025-02-22 14:26:59,792 | INFO     | ..............................
[2025-02-22 15:27:19] 2025-02-22 14:26:59,793 | INFO     | . Timing measurements:
[2025-02-22 15:27:19] 2025-02-22 14:26:59,793 | INFO     | . get job = 0 s
[2025-02-22 15:27:19] 2025-02-22 14:26:59,793 | INFO     | . initial setup = 1 s
[2025-02-22 15:27:19] 2025-02-22 14:26:59,793 | INFO     | . payload setup = 4 s
[2025-02-22 15:27:19] 2025-02-22 14:26:59,793 | INFO     | . stage-in = 0 s
[2025-02-22 15:27:19] 2025-02-22 14:26:59,793 | INFO     | . payload execution = 22824 s
[2025-02-22 15:27:19] 2025-02-22 14:26:59,793 | INFO     | . stage-out = 1 s
[2025-02-22 15:27:19] 2025-02-22 14:26:59,793 | INFO     | . log creation = 0 s
[2025-02-22 15:27:19] 2025-02-22 14:26:59,793 | INFO     | ..............................
[2025-02-22 15:27:19] 2025-02-22 14:27:00,264 | INFO     | 
[2025-02-22 15:27:19] 2025-02-22 14:27:00,264 | INFO     | job summary report
[2025-02-22 15:27:19] 2025-02-22 14:27:00,264 | INFO     | --------------------------------------------------
[2025-02-22 15:27:19] 2025-02-22 14:27:00,264 | INFO     | PanDA job id: 6521124696
[2025-02-22 15:27:19] 2025-02-22 14:27:00,264 | INFO     | task id: 43205075
[2025-02-22 15:27:19] 2025-02-22 14:27:00,265 | INFO     | errors: (none)
[2025-02-22 15:27:19] 2025-02-22 14:27:00,265 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 15:27:19] 2025-02-22 14:27:00,265 | INFO     | pilot state: finished 
[2025-02-22 15:27:19] 2025-02-22 14:27:00,265 | INFO     | transexitcode: 0
[2025-02-22 15:27:19] 2025-02-22 14:27:00,265 | INFO     | exeerrorcode: 0
[2025-02-22 15:27:19] 2025-02-22 14:27:00,265 | INFO     | exeerrordiag: 
[2025-02-22 15:27:19] 2025-02-22 14:27:00,265 | INFO     | exitcode: 0
[2025-02-22 15:27:19] 2025-02-22 14:27:00,265 | INFO     | exitmsg: OK
[2025-02-22 15:27:19] 2025-02-22 14:27:00,265 | INFO     | cpuconsumptiontime: 88075 s
[2025-02-22 15:27:19] 2025-02-22 14:27:00,265 | INFO     | nevents: 400
[2025-02-22 15:27:19] 2025-02-22 14:27:00,265 | INFO     | neventsw: 0
[2025-02-22 15:27:19] 2025-02-22 14:27:00,265 | INFO     | pid: 2956980
[2025-02-22 15:27:19] 2025-02-22 14:27:00,265 | INFO     | pgrp: 2956980
[2025-02-22 15:27:19] 2025-02-22 14:27:00,266 | INFO     | corecount: 4
[2025-02-22 15:27:19] 2025-02-22 14:27:00,266 | INFO     | event service: False
[2025-02-22 15:27:19] 2025-02-22 14:27:00,266 | INFO     | sizes: {0: 2382534, 1: 2383401, 4: 2383607, 12: 2383635, 22832: 2418062, 22835: 2427025, 22837: 2427209, 22842: 2427379}
[2025-02-22 15:27:19] 2025-02-22 14:27:00,266 | INFO     | --------------------------------------------------
[2025-02-22 15:27:19] 2025-02-22 14:27:00,266 | INFO     | 
[2025-02-22 15:27:19] 2025-02-22 14:27:00,266 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2025-02-22 15:27:19] 2025-02-22 14:27:00,285 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 15:27:19] 2025-02-22 14:27:00,285 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 15:27:19] 2025-02-22 14:27:00,285 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 15:27:19] 2025-02-22 14:27:00,285 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 15:27:19] 2025-02-22 14:27:00,286 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 15:27:19] 2025-02-22 14:27:00,286 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 15:27:19] 2025-02-22 14:27:00,286 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 15:27:19] 2025-02-22 14:27:00,286 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 15:27:19] 2025-02-22 14:27:00,286 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 15:27:19] 2025-02-22 14:27:00,286 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 15:27:19] 2025-02-22 14:27:00,286 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 15:27:19] 2025-02-22 14:27:00,286 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 15:27:19] 2025-02-22 14:27:00,286 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 15:27:19] 2025-02-22 14:27:00,286 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 15:27:19] 2025-02-22 14:27:00,286 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 15:27:19] 2025-02-22 14:27:00,286 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 15:27:19] 2025-02-22 14:27:00,287 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 15:27:19] 2025-02-22 14:27:00,287 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 15:27:19] 2025-02-22 14:27:00,287 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 15:27:19] 2025-02-22 14:27:00,287 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 15:27:19] 2025-02-22 14:27:00,287 | INFO     | job 6521124696 has completed (purged errors)
[2025-02-22 15:27:19] 2025-02-22 14:27:00,287 | INFO     | overall cleanup function is called
[2025-02-22 15:27:19] 2025-02-22 14:27:01,295 | INFO     | --- collectZombieJob: --- 10, [2956980]
[2025-02-22 15:27:19] 2025-02-22 14:27:01,295 | INFO     | zombie collector waiting for pid 2956980
[2025-02-22 15:27:19] 2025-02-22 14:27:01,295 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 15:27:19] 2025-02-22 14:27:01,295 | INFO     | collected zombie processes
[2025-02-22 15:27:19] 2025-02-22 14:27:01,295 | INFO     | will attempt to kill all subprocesses of pid=2956980
[2025-02-22 15:27:19] 2025-02-22 14:27:01,396 | INFO     | process IDs to be killed: [2956980] (in reverse order)
[2025-02-22 15:27:19] 2025-02-22 14:27:01,481 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 15:27:19] 2025-02-22 14:27:01,482 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 15:27:19] 2025-02-22 14:27:01,492 | INFO     | did not find any defunct processes belonging to 2956980
[2025-02-22 15:27:19] 2025-02-22 14:27:01,500 | INFO     | did not find any defunct processes belonging to 2956980
[2025-02-22 15:27:19] 2025-02-22 14:27:01,501 | INFO     | ready for new job
[2025-02-22 15:27:19] 2025-02-22 14:27:01,501 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 15:27:19] 2025-02-22 14:27:01,503 | INFO     | **************************************
[2025-02-22 15:27:19] 2025-02-22 14:27:01,504 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 15:27:19] 2025-02-22 14:27:01,504 | INFO     | **************************************
[2025-02-22 15:27:19] 2025-02-22 14:27:01,504 | INFO     | 
[2025-02-22 15:27:19] 2025-02-22 14:27:01,508 | INFO     | architecture information:
[2025-02-22 15:27:19] 2025-02-22 14:27:01,508 | INFO     | executing command: cat /etc/os-release
[2025-02-22 15:27:19] 2025-02-22 14:27:01,522 | INFO     | cat /etc/os-release:
[2025-02-22 15:27:19] NAME="CentOS Linux"
[2025-02-22 15:27:19] VERSION="7 (Core)"
[2025-02-22 15:27:19] ID="centos"
[2025-02-22 15:27:19] ID_LIKE="rhel fedora"
[2025-02-22 15:27:19] VERSION_ID="7"
[2025-02-22 15:27:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 15:27:19] ANSI_COLOR="0;31"
[2025-02-22 15:27:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 15:27:19] HOME_URL="https://www.centos.org/"
[2025-02-22 15:27:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 15:27:19] 
[2025-02-22 15:27:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 15:27:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 15:27:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 15:27:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 15:27:19] 
[2025-02-22 15:27:19] 2025-02-22 14:27:01,523 | INFO     | **************************************
[2025-02-22 15:27:19] 2025-02-22 14:27:02,025 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2025-02-22 15:27:19] 2025-02-22 14:27:02,037 | INFO     | sufficient remaining disk space (658840223744 B)
[2025-02-22 15:27:19] 2025-02-22 14:27:02,037 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 15:27:19] 2025-02-22 14:27:02,038 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 15:27:19] 2025-02-22 14:27:02,038 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 15:27:19] 2025-02-22 14:27:02,406 | INFO     | all data control threads have been joined
[2025-02-22 15:27:19] 2025-02-22 14:27:02,487 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 15:27:19] 2025-02-22 14:27:02,487 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 15:27:19] 2025-02-22 14:27:02,487 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 15:27:19] 2025-02-22 14:27:02,972 | INFO     | all payload control threads have been joined
[2025-02-22 15:27:19] 2025-02-22 14:27:03,035 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 15:27:19] 2025-02-22 14:27:03,036 | INFO     | aborting loop
[2025-02-22 15:27:19] 2025-02-22 14:27:03,040 | INFO     | [job] retrieve thread has finished
[2025-02-22 15:27:19] 2025-02-22 14:27:03,091 | INFO     | all job control threads have been joined
[2025-02-22 15:27:19] 2025-02-22 14:27:03,104 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 15:27:19] 2025-02-22 14:27:03,376 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 15:27:19] 2025-02-22 14:27:03,411 | INFO     | [data] control thread has finished
[2025-02-22 15:27:19] 2025-02-22 14:27:03,437 | INFO     | [data] copytool_in thread has finished
[2025-02-22 15:27:19] 2025-02-22 14:27:03,967 | INFO     | [payload] validate_post thread has finished
[2025-02-22 15:27:19] 2025-02-22 14:27:03,977 | INFO     | [payload] control thread has finished
[2025-02-22 15:27:19] 2025-02-22 14:27:04,041 | INFO     | [job] job monitor thread has finished
[2025-02-22 15:27:19] 2025-02-22 14:27:04,096 | INFO     | [job] control thread has finished
[2025-02-22 15:27:19] 2025-02-22 14:27:04,181 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 15:27:19] 2025-02-22 14:27:04,311 | INFO     | [job] validate thread has finished
[2025-02-22 15:27:19] 2025-02-22 14:27:04,472 | INFO     | [payload] failed_post thread has finished
[2025-02-22 15:27:19] 2025-02-22 14:27:04,520 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 15:27:19] 2025-02-22 14:27:04,866 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 15:27:19] 2025-02-22 14:27:05,382 | INFO     | [data] copytool_out thread has finished
[2025-02-22 15:27:19] 2025-02-22 14:27:05,871 | INFO     | [job] queue monitor thread has finished
[2025-02-22 15:27:19] 2025-02-22 14:27:06,043 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 15:27:19] 2025-02-22 14:27:12,836 | INFO     | job.realtimelogging is not enabled
[2025-02-22 15:27:19] 2025-02-22 14:27:13,841 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 15:27:19] 2025-02-22 14:27:14,121 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22661541459776)>', '<ExcThread(monitor, started 22661308581632)>']
[2025-02-22 15:27:19] 2025-02-22 14:27:14,546 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 15:27:19] 2025-02-22 14:27:14,546 | INFO     | [monitor] control thread has ended
[2025-02-22 15:27:19] 2025-02-22 14:27:19,146 | INFO     | all workflow threads have been joined
[2025-02-22 15:27:19] 2025-02-22 14:27:19,147 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 15:27:19] 2025-02-22 14:27:19,147 | INFO     | traces error code: 0
[2025-02-22 15:27:19] 2025-02-22 14:27:19,148 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 15:27:19] 2025-02-22 14:27:19,300 [wrapper] ==== pilot stdout END ====
[2025-02-22 15:27:19] 2025-02-22 14:27:19,303 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 15:27:19] 2025-02-22 14:27:19,305 [wrapper] pilotpid: 2947558
[2025-02-22 15:27:19] 2025-02-22 14:27:19,307 [wrapper] Pilot exit status: 0
[2025-02-22 15:27:19] 2025-02-22 14:27:19,316 [wrapper] pandaids: 6521124696
[2025-02-22 15:27:19] 2025-02-22 14:27:19,378 [wrapper] cleanup supervisor_pilot 3771627 2947559
[2025-02-22 15:27:19] 2025-02-22 14:27:19,381 [wrapper] Test setup, not cleaning
[2025-02-22 15:27:19] 2025-02-22 14:27:19,386 [wrapper] apfmon messages muted
[2025-02-22 15:27:19] 2025-02-22 14:27:19,389 [wrapper] ==== wrapper stdout END ====
[2025-02-22 15:27:19] 2025-02-22 14:27:19,391 [wrapper] ==== wrapper stderr END ====
[2025-02-22 15:27:19]  *** Error codes and diagnostics ***
[2025-02-22 15:27:19]     "exeErrorCode": 0,
[2025-02-22 15:27:19]     "exeErrorDiag": "",
[2025-02-22 15:27:19]     "pilotErrorCode": 0,
[2025-02-22 15:27:19]     "pilotErrorDiag": "",
[2025-02-22 15:27:19]  *** Listing of results directory ***
[2025-02-22 15:27:19] total 664556
[2025-02-22 15:27:19] -rwx------ 1 boinc boinc     35865 Feb 20 19:43 runpilot2-wrapper.sh
[2025-02-22 15:27:19] -rw-r--r-- 1 boinc boinc      5118 Feb 20 19:43 queuedata.json
[2025-02-22 15:27:19] -rw-r--r-- 1 boinc boinc    491065 Feb 20 19:43 pilot3.tar.gz
[2025-02-22 15:27:19] -rw-r--r-- 1 boinc boinc       100 Feb 22 09:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 15:27:19] -rwxr-xr-x 1 boinc boinc      7986 Feb 22 09:05 run_atlas
[2025-02-22 15:27:19] -rw-r--r-- 1 boinc boinc       105 Feb 22 09:05 job.xml
[2025-02-22 15:27:19] -rw-r--r-- 2 boinc boinc 343413934 Feb 22 09:05 EVNT.43092757._000332.pool.root.1
[2025-02-22 15:27:19] -rw-r--r-- 1 boinc boinc      6633 Feb 22 09:05 init_data.xml
[2025-02-22 15:27:19] -rw-r--r-- 2 boinc boinc     17569 Feb 22 09:05 start_atlas.sh
[2025-02-22 15:27:19] drwxrwx--x 2 boinc boinc      4096 Feb 22 09:05 shared
[2025-02-22 15:27:19] -rw-r--r-- 2 boinc boinc    503554 Feb 22 09:05 input.tar.gz
[2025-02-22 15:27:19] -rw-r--r-- 1 boinc boinc         0 Feb 22 09:05 boinc_lockfile
[2025-02-22 15:27:19] -rw-r--r-- 1 boinc boinc      2552 Feb 22 09:05 pandaJob.out
[2025-02-22 15:27:19] -rw------- 1 boinc boinc       424 Feb 22 09:05 setup.sh.local
[2025-02-22 15:27:19] -rw------- 1 boinc boinc    988009 Feb 22 09:06 agis_schedconf.cvmfs.json
[2025-02-22 15:27:19] drwx------ 4 boinc boinc      4096 Feb 22 09:06 pilot3
[2025-02-22 15:27:19] -rw------- 1 boinc boinc 326953322 Feb 22 15:25 HITS.43205075._055597.pool.root.1
[2025-02-22 15:27:19] -rw-r--r-- 1 boinc boinc       532 Feb 22 15:26 boinc_task_state.xml
[2025-02-22 15:27:19] -rw------- 1 boinc boinc        95 Feb 22 15:26 pilot_heartbeat.json
[2025-02-22 15:27:19] -rw------- 1 boinc boinc      1036 Feb 22 15:26 memory_monitor_summary.json
[2025-02-22 15:27:19] -rw------- 1 boinc boinc   1582569 Feb 22 15:26 agis_ddmendpoints.agis.ALL.json
[2025-02-22 15:27:19] -rw------- 1 boinc boinc    467274 Feb 22 15:26 log.43205075._055597.job.log.tgz.1
[2025-02-22 15:27:19] -rw------- 1 boinc boinc      7741 Feb 22 15:26 heartbeat.json
[2025-02-22 15:27:19] -rw-r--r-- 1 boinc boinc      8192 Feb 22 15:27 boinc_mmap_file
[2025-02-22 15:27:19] -rw-r--r-- 1 boinc boinc        28 Feb 22 15:27 wrapper_checkpoint.txt
[2025-02-22 15:27:19] -rw------- 1 boinc boinc      4297 Feb 22 15:27 pilotlog.txt
[2025-02-22 15:27:19] -rw------- 1 boinc boinc   2694216 Feb 22 15:27 log.43205075._055597.job.log.1
[2025-02-22 15:27:19] -rw------- 1 boinc boinc       357 Feb 22 15:27 output.list
[2025-02-22 15:27:19] -rw-r--r-- 1 boinc boinc       620 Feb 22 15:27 runtime_log
[2025-02-22 15:27:19] -rw------- 1 boinc boinc   3184640 Feb 22 15:27 result.tar.gz
[2025-02-22 15:27:19] -rw-r--r-- 1 boinc boinc     11424 Feb 22 15:27 runtime_log.err
[2025-02-22 15:27:19] -rw------- 1 boinc boinc       665 Feb 22 15:27 PHBMDmVhQ56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmDGcKDm6oY6Km.diag
[2025-02-22 15:27:19] -rw-r--r-- 1 boinc boinc     21277 Feb 22 15:27 stderr.txt
[2025-02-22 15:27:19] HITS file was successfully produced:
[2025-02-22 15:27:19] -rw------- 1 boinc boinc 326953322 Feb 22 15:25 shared/HITS.pool.root.1
[2025-02-22 15:27:19]  *** Contents of shared directory: ***
[2025-02-22 15:27:19] total 658292
[2025-02-22 15:27:19] -rw-r--r-- 2 boinc boinc 343413934 Feb 22 09:05 ATLAS.root_0
[2025-02-22 15:27:19] -rw-r--r-- 2 boinc boinc     17569 Feb 22 09:05 start_atlas.sh
[2025-02-22 15:27:19] -rw-r--r-- 2 boinc boinc    503554 Feb 22 09:05 input.tar.gz
[2025-02-22 15:27:19] -rw------- 1 boinc boinc 326953322 Feb 22 15:25 HITS.pool.root.1
[2025-02-22 15:27:19] -rw------- 1 boinc boinc   3184640 Feb 22 15:27 result.tar.gz
15:27:20 (2943753): run_atlas exited; CPU time 88114.208251
15:27:20 (2943753): called boinc_finish(0)

</stderr_txt>
]]>

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