Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:37:57 (1996): wrapper (7.7.26015): starting
16:37:57 (1996): wrapper: running run_atlas (--nthreads 10)
[2025-02-20 16:37:57] Arguments: --nthreads 10
[2025-02-20 16:37:57] Threads: 10
[2025-02-20 16:37:57] Checking for CVMFS
[2025-02-20 16:37:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-20 16:37:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-20 16:37:58] Running cvmfs_config stat atlas.cern.ch
[2025-02-20 16:37:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-20 16:37:59] 2.11.2.0 26780 8674 228504 142878 2 38 14801111 18432000 12272 130560 0 30383632 98.852 83369142 38239 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-20 16:37:59] CVMFS is ok
[2025-02-20 16:37:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-20 16:37:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-20 16:37:59] Further information can be found at the LHC@home message board.
[2025-02-20 16:37:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-20 16:37:59] Checking for apptainer binary...
[2025-02-20 16:37:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-20 16:37:59] Running /usr/bin/apptainer --version
[2025-02-20 16:37:59] apptainer version 1.3.2-1.el7
[2025-02-20 16:38:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-20 16:38:03] c-211-22.aglt2.org
[2025-02-20 16:38:03] apptainer works
[2025-02-20 16:38:03] Set ATHENA_PROC_NUMBER=10
[2025-02-20 16:38:03] Set ATHENA_CORE_NUMBER=10
[2025-02-20 16:38:03] Starting ATLAS job with PandaID=6521124378
[2025-02-20 16:38:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-21 18:29:37]  *** The last 200 lines of the pilot log: ***
[2025-02-21 18:29:37] 2025-02-21 23:29:19,481 | INFO     | chi2: 6.999939113157716
[2025-02-21 18:29:37] 2025-02-21 23:29:19,485 | INFO     | model: linear, x: [1740087600.0, 1740087661.0, 1740087722.0, 1740087783.0, 1740087844.0, 1740087905.0, 1740087966.0, 1740088027.0, 1740088088.0, 1740088149.0, 1740
[2025-02-21 18:29:37] 2025-02-21 23:29:19,486 | INFO     | sum of square deviations: 1086803609002.1973
[2025-02-21 18:29:37] 2025-02-21 23:29:19,545 | INFO     | sum of deviations: 1910048855216.3982
[2025-02-21 18:29:37] 2025-02-21 23:29:19,545 | INFO     | mean x: 1740133899.6912441
[2025-02-21 18:29:37] 2025-02-21 23:29:19,545 | INFO     | mean y: 2642883.5339038842
[2025-02-21 18:29:37] 2025-02-21 23:29:19,545 | INFO     | -- intersect: -3055628855.2580376
[2025-02-21 18:29:37] 2025-02-21 23:29:19,546 | INFO     | intersect: -3055628855.2580376
[2025-02-21 18:29:37] 2025-02-21 23:29:19,548 | INFO     | chi2: 6.223768524259918
[2025-02-21 18:29:37] 2025-02-21 23:29:19,548 | INFO     | current chi2=6.223768524259918 (change=11.0882477168814 %)
[2025-02-21 18:29:37] 2025-02-21 23:29:19,548 | INFO     | right removable region: 1518
[2025-02-21 18:29:37] 2025-02-21 23:29:19,550 | INFO     | model: linear, x: [1740087905.0, 1740087966.0, 1740088027.0, 1740088088.0, 1740088149.0, 1740088210.0, 1740088271.0, 1740088332.0, 1740088393.0, 1740088454.0, 1740
[2025-02-21 18:29:37] 2025-02-21 23:29:19,550 | INFO     | sum of square deviations: 1086802968502.1952
[2025-02-21 18:29:37] 2025-02-21 23:29:19,610 | INFO     | sum of deviations: 1356155181435.4697
[2025-02-21 18:29:37] 2025-02-21 23:29:19,610 | INFO     | mean x: 1740134204.6912441
[2025-02-21 18:29:37] 2025-02-21 23:29:19,610 | INFO     | mean y: 2647903.389071758
[2025-02-21 18:29:37] 2025-02-21 23:29:19,610 | INFO     | -- intersect: -2168759505.7547083
[2025-02-21 18:29:37] 2025-02-21 23:29:19,611 | INFO     | intersect: -2168759505.7547083
[2025-02-21 18:29:37] 2025-02-21 23:29:19,613 | INFO     | chi2: 4.116911658944661
[2025-02-21 18:29:37] 2025-02-21 23:29:19,613 | INFO     | current chi2=4.116911658944661 (change=41.186464733584 %)
[2025-02-21 18:29:37] 2025-02-21 23:29:19,614 | INFO     | model: linear, x: [1740088210.0, 1740088271.0, 1740088332.0, 1740088393.0, 1740088454.0, 1740088515.0, 1740088576.0, 1740088637.0, 1740088698.0, 1740088759.0, 1740
[2025-02-21 18:29:37] 2025-02-21 23:29:19,615 | INFO     | sum of square deviations: 1076105824432.2966
[2025-02-21 18:29:37] 2025-02-21 23:29:19,673 | INFO     | sum of deviations: 1021547886153.8176
[2025-02-21 18:29:37] 2025-02-21 23:29:19,674 | INFO     | mean x: 1740134357.193527
[2025-02-21 18:29:37] 2025-02-21 23:29:19,674 | INFO     | mean y: 2652673.4101717304
[2025-02-21 18:29:37] 2025-02-21 23:29:19,674 | INFO     | -- intersect: -1649257885.8068783
[2025-02-21 18:29:37] 2025-02-21 23:29:19,674 | INFO     | intersect: -1649257885.8068783
[2025-02-21 18:29:37] 2025-02-21 23:29:19,676 | INFO     | chi2: 2.644903746290286
[2025-02-21 18:29:37] 2025-02-21 23:29:19,677 | INFO     | current chi2=2.644903746290286 (change=35.755149359501026 %)
[2025-02-21 18:29:37] 2025-02-21 23:29:19,678 | INFO     | model: linear, x: [1740088515.0, 1740088576.0, 1740088637.0, 1740088698.0, 1740088759.0, 1740088820.0, 1740088881.0, 1740088942.0, 1740089003.0, 1740089064.0, 1740
[2025-02-21 18:29:37] 2025-02-21 23:29:19,679 | INFO     | sum of square deviations: 1065479100287.383
[2025-02-21 18:29:37] 2025-02-21 23:29:19,738 | INFO     | sum of deviations: 703684478479.1627
[2025-02-21 18:29:37] 2025-02-21 23:29:19,738 | INFO     | mean x: 1740134509.695825
[2025-02-21 18:29:37] 2025-02-21 23:29:19,739 | INFO     | mean y: 2657234.7084161695
[2025-02-21 18:29:37] 2025-02-21 23:29:19,739 | INFO     | -- intersect: -1146596321.376001
[2025-02-21 18:29:37] 2025-02-21 23:29:19,739 | INFO     | intersect: -1146596321.376001
[2025-02-21 18:29:37] 2025-02-21 23:29:19,741 | INFO     | chi2: 1.3188052085712192
[2025-02-21 18:29:37] 2025-02-21 23:29:19,741 | INFO     | current chi2=1.3188052085712192 (change=50.13787513360509 %)
[2025-02-21 18:29:37] 2025-02-21 23:29:19,743 | INFO     | model: linear, x: [1740088820.0, 1740088881.0, 1740088942.0, 1740089003.0, 1740089064.0, 1740089125.0, 1740089187.0, 1740089247.0, 1740089308.0, 1740089370.0, 1740
[2025-02-21 18:29:37] 2025-02-21 23:29:19,744 | INFO     | sum of square deviations: 1054922563504.9531
[2025-02-21 18:29:37] 2025-02-21 23:29:19,802 | INFO     | sum of deviations: 589489630251.8226
[2025-02-21 18:29:37] 2025-02-21 23:29:19,802 | INFO     | mean x: 1740134662.1981382
[2025-02-21 18:29:37] 2025-02-21 23:29:19,803 | INFO     | mean y: 2658883.4368351065
[2025-02-21 18:29:37] 2025-02-21 23:29:19,803 | INFO     | -- intersect: -969726554.2197407
[2025-02-21 18:29:37] 2025-02-21 23:29:19,803 | INFO     | intersect: -969726554.2197407
[2025-02-21 18:29:37] 2025-02-21 23:29:19,805 | INFO     | chi2: 1.1427365761225539
[2025-02-21 18:29:37] 2025-02-21 23:29:19,805 | INFO     | current chi2=1.1427365761225539 (change=13.350617005783317 %)
[2025-02-21 18:29:37] 2025-02-21 23:29:19,805 | INFO     | left removable region: 40
[2025-02-21 18:29:37] 2025-02-21 23:29:19,807 | INFO     | model: linear, x: [1740090040.0, 1740090102.0, 1740090163.0, 1740090224.0, 1740090286.0, 1740090346.0, 1740090406.0, 1740090467.0, 1740090529.0, 1740090589.0, 1740
[2025-02-21 18:29:37] 2025-02-21 23:29:19,808 | INFO     | sum of square deviations: 1001152674349.6996
[2025-02-21 18:29:37] 2025-02-21 23:29:19,864 | INFO     | sum of deviations: 394147380077.5521
[2025-02-21 18:29:37] 2025-02-21 23:29:19,864 | INFO     | mean x: 1740135089.2036536
[2025-02-21 18:29:37] 2025-02-21 23:29:19,864 | INFO     | mean y: 2664758.712449256
[2025-02-21 18:29:37] 2025-02-21 23:29:19,865 | INFO     | -- intersect: -682415253.5205953
[2025-02-21 18:29:37] 2025-02-21 23:29:19,865 | INFO     | intersect: -682415253.5205953
[2025-02-21 18:29:37] 2025-02-21 23:29:19,867 | INFO     | chi2: 0.0661536407828731
[2025-02-21 18:29:37] 2025-02-21 23:29:19,867 | INFO     | -- intersect: -682415253.5205953
[2025-02-21 18:29:37] 2025-02-21 23:29:19,867 | INFO     | current memory leak: 0.39 B/s (using 1478 data points, chi2=0.07)
[2025-02-21 18:29:37] 2025-02-21 23:29:19,869 | INFO     | ..............................
[2025-02-21 18:29:37] 2025-02-21 23:29:19,869 | INFO     | . Timing measurements:
[2025-02-21 18:29:37] 2025-02-21 23:29:19,869 | INFO     | . get job = 0 s
[2025-02-21 18:29:37] 2025-02-21 23:29:19,869 | INFO     | . initial setup = 3 s
[2025-02-21 18:29:37] 2025-02-21 23:29:19,869 | INFO     | . payload setup = 17 s
[2025-02-21 18:29:37] 2025-02-21 23:29:19,869 | INFO     | . stage-in = 0 s
[2025-02-21 18:29:37] 2025-02-21 23:29:19,869 | INFO     | . payload execution = 92932 s
[2025-02-21 18:29:37] 2025-02-21 23:29:19,870 | INFO     | . stage-out = 3 s
[2025-02-21 18:29:37] 2025-02-21 23:29:19,870 | INFO     | . log creation = 0 s
[2025-02-21 18:29:37] 2025-02-21 23:29:19,870 | INFO     | ..............................
[2025-02-21 18:29:37] 2025-02-21 23:29:20,478 | INFO     | 
[2025-02-21 18:29:37] 2025-02-21 23:29:20,478 | INFO     | job summary report
[2025-02-21 18:29:37] 2025-02-21 23:29:20,478 | INFO     | --------------------------------------------------
[2025-02-21 18:29:37] 2025-02-21 23:29:20,478 | INFO     | PanDA job id: 6521124378
[2025-02-21 18:29:37] 2025-02-21 23:29:20,478 | INFO     | task id: 43078919
[2025-02-21 18:29:37] 2025-02-21 23:29:20,478 | INFO     | errors: (none)
[2025-02-21 18:29:37] 2025-02-21 23:29:20,479 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-21 18:29:37] 2025-02-21 23:29:20,479 | INFO     | pilot state: finished 
[2025-02-21 18:29:37] 2025-02-21 23:29:20,479 | INFO     | transexitcode: 0
[2025-02-21 18:29:37] 2025-02-21 23:29:20,479 | INFO     | exeerrorcode: 0
[2025-02-21 18:29:37] 2025-02-21 23:29:20,479 | INFO     | exeerrordiag: 
[2025-02-21 18:29:37] 2025-02-21 23:29:20,479 | INFO     | exitcode: 0
[2025-02-21 18:29:37] 2025-02-21 23:29:20,479 | INFO     | exitmsg: OK
[2025-02-21 18:29:37] 2025-02-21 23:29:20,480 | INFO     | cpuconsumptiontime: 197179 s
[2025-02-21 18:29:37] 2025-02-21 23:29:20,480 | INFO     | nevents: 400
[2025-02-21 18:29:37] 2025-02-21 23:29:20,480 | INFO     | neventsw: 0
[2025-02-21 18:29:37] 2025-02-21 23:29:20,480 | INFO     | pid: 31564
[2025-02-21 18:29:37] 2025-02-21 23:29:20,480 | INFO     | pgrp: 31564
[2025-02-21 18:29:37] 2025-02-21 23:29:20,480 | INFO     | corecount: 10
[2025-02-21 18:29:37] 2025-02-21 23:29:20,480 | INFO     | event service: False
[2025-02-21 18:29:37] 2025-02-21 23:29:20,481 | INFO     | sizes: {0: 2389197, 1: 2389396, 2: 2389424, 13: 2389424, 20: 2389686, 24: 2389714, 92954: 2452138, 92960: 2461921, 92963: 2461977, 92992: 2462147}
[2025-02-21 18:29:37] 2025-02-21 23:29:20,481 | INFO     | --------------------------------------------------
[2025-02-21 18:29:37] 2025-02-21 23:29:20,481 | INFO     | 
[2025-02-21 18:29:37] 2025-02-21 23:29:20,481 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-21 18:29:37] 2025-02-21 23:29:20,516 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-21 18:29:37] 2025-02-21 23:29:20,517 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-21 18:29:37] 2025-02-21 23:29:20,517 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-21 18:29:37] 2025-02-21 23:29:20,518 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-21 18:29:37] 2025-02-21 23:29:20,518 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-21 18:29:37] 2025-02-21 23:29:20,518 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-21 18:29:37] 2025-02-21 23:29:20,518 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-21 18:29:37] 2025-02-21 23:29:20,518 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-21 18:29:37] 2025-02-21 23:29:20,518 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-21 18:29:37] 2025-02-21 23:29:20,519 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-21 18:29:37] 2025-02-21 23:29:20,519 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-21 18:29:37] 2025-02-21 23:29:20,519 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-21 18:29:37] 2025-02-21 23:29:20,519 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-21 18:29:37] 2025-02-21 23:29:20,519 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-21 18:29:37] 2025-02-21 23:29:20,519 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-21 18:29:37] 2025-02-21 23:29:20,520 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-21 18:29:37] 2025-02-21 23:29:20,520 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-21 18:29:37] 2025-02-21 23:29:20,520 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-21 18:29:37] 2025-02-21 23:29:20,520 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-21 18:29:37] 2025-02-21 23:29:20,520 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-21 18:29:37] 2025-02-21 23:29:20,521 | INFO     | job 6521124378 has completed (purged errors)
[2025-02-21 18:29:37] 2025-02-21 23:29:20,521 | INFO     | overall cleanup function is called
[2025-02-21 18:29:37] 2025-02-21 23:29:21,531 | INFO     | --- collectZombieJob: --- 10, [31564]
[2025-02-21 18:29:37] 2025-02-21 23:29:21,531 | INFO     | zombie collector waiting for pid 31564
[2025-02-21 18:29:37] 2025-02-21 23:29:21,531 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-21 18:29:37] 2025-02-21 23:29:21,531 | INFO     | collected zombie processes
[2025-02-21 18:29:37] 2025-02-21 23:29:21,532 | INFO     | will attempt to kill all subprocesses of pid=31564
[2025-02-21 18:29:37] 2025-02-21 23:29:22,850 | INFO     | process IDs to be killed: [31564] (in reverse order)
[2025-02-21 18:29:37] 2025-02-21 23:29:23,021 | WARNING  | found no corresponding commands to process id(s)
[2025-02-21 18:29:37] 2025-02-21 23:29:23,021 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-21 18:29:37] 2025-02-21 23:29:23,040 | INFO     | did not find any defunct processes belonging to 31564
[2025-02-21 18:29:37] 2025-02-21 23:29:23,057 | INFO     | did not find any defunct processes belonging to 31564
[2025-02-21 18:29:37] 2025-02-21 23:29:23,058 | INFO     | ready for new job
[2025-02-21 18:29:37] 2025-02-21 23:29:23,058 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-21 18:29:37] 2025-02-21 23:29:23,066 | INFO     | **************************************
[2025-02-21 18:29:37] 2025-02-21 23:29:23,066 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-21 18:29:37] 2025-02-21 23:29:23,066 | INFO     | **************************************
[2025-02-21 18:29:37] 2025-02-21 23:29:23,067 | INFO     | 
[2025-02-21 18:29:37] 2025-02-21 23:29:23,069 | INFO     | architecture information:
[2025-02-21 18:29:37] 2025-02-21 23:29:23,070 | INFO     | executing command: cat /etc/os-release
[2025-02-21 18:29:37] 2025-02-21 23:29:23,153 | INFO     | cat /etc/os-release:
[2025-02-21 18:29:37] NAME="CentOS Linux"
[2025-02-21 18:29:37] VERSION="7 (Core)"
[2025-02-21 18:29:37] ID="centos"
[2025-02-21 18:29:37] ID_LIKE="rhel fedora"
[2025-02-21 18:29:37] VERSION_ID="7"
[2025-02-21 18:29:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-21 18:29:37] ANSI_COLOR="0;31"
[2025-02-21 18:29:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-21 18:29:37] HOME_URL="https://www.centos.org/"
[2025-02-21 18:29:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-21 18:29:37] 
[2025-02-21 18:29:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-21 18:29:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-21 18:29:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-21 18:29:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-21 18:29:37] 
[2025-02-21 18:29:37] 2025-02-21 23:29:23,154 | INFO     | **************************************
[2025-02-21 18:29:37] 2025-02-21 23:29:23,657 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-21 18:29:37] 2025-02-21 23:29:23,864 | INFO     | sufficient remaining disk space (56326356992 B)
[2025-02-21 18:29:37] 2025-02-21 23:29:23,864 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-21 18:29:37] 2025-02-21 23:29:23,864 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-21 18:29:37] 2025-02-21 23:29:23,865 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-21 18:29:37] 2025-02-21 23:29:23,865 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-21 18:29:37] 2025-02-21 23:29:23,986 | INFO     | all job control threads have been joined
[2025-02-21 18:29:37] 2025-02-21 23:29:24,428 | INFO     | all data control threads have been joined
[2025-02-21 18:29:37] 2025-02-21 23:29:24,461 | INFO     | all payload control threads have been joined
[2025-02-21 18:29:37] 2025-02-21 23:29:24,650 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-21 18:29:37] 2025-02-21 23:29:24,650 | INFO     | aborting loop
[2025-02-21 18:29:37] 2025-02-21 23:29:24,871 | INFO     | [job] retrieve thread has finished
[2025-02-21 18:29:37] 2025-02-21 23:29:24,907 | INFO     | [job] create_data_payload thread has finished
[2025-02-21 18:29:37] 2025-02-21 23:29:24,973 | INFO     | [payload] validate_post thread has finished
[2025-02-21 18:29:37] 2025-02-21 23:29:24,991 | INFO     | [job] control thread has finished
[2025-02-21 18:29:37] 2025-02-21 23:29:25,025 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-21 18:29:37] 2025-02-21 23:29:25,086 | INFO     | [job] validate thread has finished
[2025-02-21 18:29:37] 2025-02-21 23:29:25,100 | INFO     | [payload] failed_post thread has finished
[2025-02-21 18:29:37] 2025-02-21 23:29:25,116 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-21 18:29:37] 2025-02-21 23:29:25,436 | INFO     | [data] control thread has finished
[2025-02-21 18:29:37] 2025-02-21 23:29:25,468 | INFO     | [payload] control thread has finished
[2025-02-21 18:29:37] 2025-02-21 23:29:25,586 | INFO     | [payload] validate_pre thread has finished
[2025-02-21 18:29:37] 2025-02-21 23:29:25,586 | INFO     | [data] copytool_in thread has finished
[2025-02-21 18:29:37] 2025-02-21 23:29:25,670 | INFO     | [job] job monitor thread has finished
[2025-02-21 18:29:37] 2025-02-21 23:29:25,716 | INFO     | PID=14169 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-21 18:29:37] 2025-02-21 23:29:25,717 | INFO     | .. there are 29 such processes running
[2025-02-21 18:29:37] 2025-02-21 23:29:25,718 | INFO     | found 0 job(s) in 20 queues
[2025-02-21 18:29:37] 2025-02-21 23:29:25,718 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-21 18:29:37] 2025-02-21 23:29:25,718 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-21 18:29:37] 2025-02-21 23:29:25,873 | INFO     | [data] copytool_out thread has finished
[2025-02-21 18:29:37] 2025-02-21 23:29:26,031 | INFO     | [job] queue monitor thread has finished
[2025-02-21 18:29:37] 2025-02-21 23:29:26,276 | INFO     | [payload] execute_payloads thread has finished
[2025-02-21 18:29:37] 2025-02-21 23:29:27,875 | INFO     | [data] queue_monitor thread has finished
[2025-02-21 18:29:37] 2025-02-21 23:29:28,952 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140251728324416)>', '<ExcThread(monitor, started 140251074914048)>']
[2025-02-21 18:29:37] 2025-02-21 23:29:29,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-21 18:29:37] 2025-02-21 23:29:29,740 | INFO     | [monitor] control thread has ended
[2025-02-21 18:29:37] 2025-02-21 23:29:34,604 | INFO     | all workflow threads have been joined
[2025-02-21 18:29:37] 2025-02-21 23:29:34,604 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-21 18:29:37] 2025-02-21 23:29:34,604 | INFO     | traces error code: 0
[2025-02-21 18:29:37] 2025-02-21 23:29:34,605 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-21 18:29:37] 2025-02-21 23:29:34,943 [wrapper] ==== pilot stdout END ====
[2025-02-21 18:29:37] 2025-02-21 23:29:34,974 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-21 18:29:37] 2025-02-21 23:29:35,002 [wrapper] pilotpid: 14169
[2025-02-21 18:29:37] 2025-02-21 23:29:35,046 [wrapper] Pilot exit status: 0
[2025-02-21 18:29:37] 2025-02-21 23:29:35,216 [wrapper] pandaids: 6521124378
[2025-02-21 18:29:37] 2025-02-21 23:29:35,718 [wrapper] cleanup supervisor_pilot 45876 14170
[2025-02-21 18:29:37] 2025-02-21 23:29:35,758 [wrapper] Test setup, not cleaning
[2025-02-21 18:29:37] 2025-02-21 23:29:35,857 [wrapper] apfmon messages muted
[2025-02-21 18:29:37] 2025-02-21 23:29:35,901 [wrapper] ==== wrapper stdout END ====
[2025-02-21 18:29:37] 2025-02-21 23:29:35,942 [wrapper] ==== wrapper stderr END ====
[2025-02-21 18:29:37]  *** Error codes and diagnostics ***
[2025-02-21 18:29:37]     "exeErrorCode": 0,
[2025-02-21 18:29:37]     "exeErrorDiag": "",
[2025-02-21 18:29:37]     "pilotErrorCode": 0,
[2025-02-21 18:29:37]     "pilotErrorDiag": "",
[2025-02-21 18:29:37]  *** Listing of results directory ***
[2025-02-21 18:29:37] total 694752
[2025-02-21 18:29:37] -rw-r--r-- 1 boincer umatlas    491065 Feb 20 12:59 pilot3.tar.gz
[2025-02-21 18:29:37] -rw-r--r-- 1 boincer umatlas      5118 Feb 20 13:13 queuedata.json
[2025-02-21 18:29:37] -rwx------ 1 boincer umatlas     35865 Feb 20 13:14 runpilot2-wrapper.sh
[2025-02-21 18:29:37] -rw-r--r-- 1 boincer umatlas       100 Feb 20 16:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-21 18:29:37] -rwxr-xr-x 1 boincer umatlas      7986 Feb 20 16:37 run_atlas
[2025-02-21 18:29:37] -rw-r--r-- 1 boincer umatlas       105 Feb 20 16:37 job.xml
[2025-02-21 18:29:37] -rw-r--r-- 2 boincer umatlas 347380333 Feb 20 16:37 EVNT.43078917._001303.pool.root.1
[2025-02-21 18:29:37] -rw-r--r-- 2 boincer umatlas     17569 Feb 20 16:37 start_atlas.sh
[2025-02-21 18:29:37] drwxrwx--x 2 boincer umatlas      4096 Feb 20 16:37 shared
[2025-02-21 18:29:37] -rw-r--r-- 2 boincer umatlas    503564 Feb 20 16:37 input.tar.gz
[2025-02-21 18:29:37] -rw-r--r-- 1 boincer umatlas         0 Feb 20 16:37 boinc_lockfile
[2025-02-21 18:29:37] -rw-r--r-- 1 boincer umatlas      2546 Feb 20 16:38 pandaJob.out
[2025-02-21 18:29:37] -rw------- 1 boincer umatlas       467 Feb 20 16:38 setup.sh.local
[2025-02-21 18:29:37] -rw------- 1 boincer umatlas    994728 Feb 20 16:38 agis_schedconf.cvmfs.json
[2025-02-21 18:29:37] drwx------ 4 boincer umatlas      4096 Feb 20 16:38 pilot3
[2025-02-21 18:29:37] -rw------- 1 boincer umatlas 328307190 Feb 21 18:27 HITS.43078919._079246.pool.root.1
[2025-02-21 18:29:37] -rw-r--r-- 1 boincer umatlas       533 Feb 21 18:27 boinc_task_state.xml
[2025-02-21 18:29:37] -rw-r--r-- 1 boincer umatlas      6037 Feb 21 18:27 init_data.xml
[2025-02-21 18:29:37] -rw------- 1 boincer umatlas      1062 Feb 21 18:28 memory_monitor_summary.json
[2025-02-21 18:29:37] -rw------- 1 boincer umatlas   1582569 Feb 21 18:28 agis_ddmendpoints.agis.ALL.json
[2025-02-21 18:29:37] -rw------- 1 boincer umatlas   1843560 Feb 21 18:28 log.43078919._079246.job.log.tgz.1
[2025-02-21 18:29:37] -rw------- 1 boincer umatlas      7770 Feb 21 18:29 heartbeat.json
[2025-02-21 18:29:37] -rw-r--r-- 1 boincer umatlas      8192 Feb 21 18:29 boinc_mmap_file
[2025-02-21 18:29:37] -rw-r--r-- 1 boincer umatlas        29 Feb 21 18:29 wrapper_checkpoint.txt
[2025-02-21 18:29:37] -rw------- 1 boincer umatlas        95 Feb 21 18:29 pilot_heartbeat.json
[2025-02-21 18:29:37] -rw------- 1 boincer umatlas      4608 Feb 21 18:29 pilotlog.txt
[2025-02-21 18:29:37] -rw------- 1 boincer umatlas  14118383 Feb 21 18:29 log.43078919._079246.job.log.1
[2025-02-21 18:29:37] -rw------- 1 boincer umatlas       357 Feb 21 18:29 output.list
[2025-02-21 18:29:37] -rw-r--r-- 1 boincer umatlas       620 Feb 21 18:29 runtime_log
[2025-02-21 18:29:37] -rw------- 1 boincer umatlas  15984640 Feb 21 18:29 result.tar.gz
[2025-02-21 18:29:37] -rw------- 1 boincer umatlas       666 Feb 21 18:29 xKeLDmwEQ56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmZjqKDmzRNkmm.diag
[2025-02-21 18:29:37] -rw-r--r-- 1 boincer umatlas     11421 Feb 21 18:29 runtime_log.err
[2025-02-21 18:29:37] -rw-r--r-- 1 boincer umatlas     21734 Feb 21 18:29 stderr.txt
[2025-02-21 18:29:37] HITS file was successfully produced:
[2025-02-21 18:29:37] -rw------- 1 boincer umatlas 328307190 Feb 21 18:27 shared/HITS.pool.root.1
[2025-02-21 18:29:37]  *** Contents of shared directory: ***
[2025-02-21 18:29:37] total 675984
[2025-02-21 18:29:37] -rw-r--r-- 2 boincer umatlas 347380333 Feb 20 16:37 ATLAS.root_0
[2025-02-21 18:29:37] -rw-r--r-- 2 boincer umatlas     17569 Feb 20 16:37 start_atlas.sh
[2025-02-21 18:29:37] -rw-r--r-- 2 boincer umatlas    503564 Feb 20 16:37 input.tar.gz
[2025-02-21 18:29:37] -rw------- 1 boincer umatlas 328307190 Feb 21 18:27 HITS.pool.root.1
[2025-02-21 18:29:37] -rw------- 1 boincer umatlas  15984640 Feb 21 18:29 result.tar.gz
18:29:39 (1996): run_atlas exited; CPU time 197044.466852
18:29:39 (1996): called boinc_finish(0)

</stderr_txt>
]]>

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