Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:42:40 (3685299): wrapper (7.7.26015): starting
12:42:40 (3685299): wrapper: running run_atlas (--nthreads 4)
[2025-02-23 12:42:40] Arguments: --nthreads 4
[2025-02-23 12:42:40] Threads: 4
[2025-02-23 12:42:40] Checking for CVMFS
[2025-02-23 12:42:40] No cvmfs_config command found, will try listing directly
[2025-02-23 12:42:40] CVMFS is ok
[2025-02-23 12:42:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 12:42:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 12:42:40] Further information can be found at the LHC@home message board.
[2025-02-23 12:42:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 12:42:40] Checking for apptainer binary...
[2025-02-23 12:42:40] which: no apptainer in ((null))
[2025-02-23 12:42:40] apptainer is not installed, using version from CVMFS
[2025-02-23 12:42:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 12:42:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-02-23 12:42:40] apptainer works
[2025-02-23 12:42:40] Set ATHENA_PROC_NUMBER=4
[2025-02-23 12:42:40] Set ATHENA_CORE_NUMBER=4
[2025-02-23 12:42:40] Starting ATLAS job with PandaID=6520973424
[2025-02-23 12:42:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-23 18:34:13]  *** The last 200 lines of the pilot log: ***
[2025-02-23 18:34:13] 2025-02-23 17:27:16,194 | INFO     | sum of square deviations: 10449170802.0
[2025-02-23 18:34:13] 2025-02-23 17:27:16,197 | INFO     | sum of deviations: 16239968085.000004
[2025-02-23 18:34:13] 2025-02-23 17:27:16,197 | INFO     | mean x: 1740321743.0
[2025-02-23 18:34:13] 2025-02-23 17:27:16,197 | INFO     | mean y: 2376104.724458204
[2025-02-23 18:34:13] 2025-02-23 17:27:16,197 | INFO     | -- intersect: -2702409767.7145305
[2025-02-23 18:34:13] 2025-02-23 17:27:16,197 | INFO     | intersect: -2702409767.7145305
[2025-02-23 18:34:13] 2025-02-23 17:27:16,197 | INFO     | chi2: 0.006105068316673849
[2025-02-23 18:34:13] 2025-02-23 17:27:16,198 | INFO     | current chi2=0.006105068316673849 (change=91.82537414843928 %)
[2025-02-23 18:34:13] 2025-02-23 17:27:16,198 | INFO     | model: linear, x: [1740312227.0, 1740312288.0, 1740312349.0, 1740312410.0, 1740312471.0, 1740312532.0, 1740312593.0, 1740312654.0, 1740312715.0, 1740312776.0, 1740
[2025-02-23 18:34:13] 2025-02-23 17:27:16,203 | INFO     | sum of square deviations: 9971385099.5
[2025-02-23 18:34:13] 2025-02-23 17:27:16,205 | INFO     | sum of deviations: 18404888280.0
[2025-02-23 18:34:13] 2025-02-23 17:27:16,206 | INFO     | mean x: 1740321895.5
[2025-02-23 18:34:13] 2025-02-23 17:27:16,206 | INFO     | mean y: 2375413.7232704405
[2025-02-23 18:34:13] 2025-02-23 17:27:16,206 | INFO     | -- intersect: -3209859369.9399796
[2025-02-23 18:34:13] 2025-02-23 17:27:16,206 | INFO     | intersect: -3209859369.9399796
[2025-02-23 18:34:13] 2025-02-23 17:27:16,206 | INFO     | chi2: 0.0027512383383502584
[2025-02-23 18:34:13] 2025-02-23 17:27:16,206 | INFO     | current chi2=0.0027512383383502584 (change=54.93517524060759 %)
[2025-02-23 18:34:13] 2025-02-23 17:27:16,207 | INFO     | model: linear, x: [1740312532.0, 1740312593.0, 1740312654.0, 1740312715.0, 1740312776.0, 1740312837.0, 1740312898.0, 1740312959.0, 1740313020.0, 1740313081.0, 1740
[2025-02-23 18:34:13] 2025-02-23 17:27:16,207 | INFO     | sum of square deviations: 9508390372.0
[2025-02-23 18:34:13] 2025-02-23 17:27:16,210 | INFO     | sum of deviations: 15645034719.0
[2025-02-23 18:34:13] 2025-02-23 17:27:16,210 | INFO     | mean x: 1740322048.0
[2025-02-23 18:34:13] 2025-02-23 17:27:16,210 | INFO     | mean y: 2376321.8051118213
[2025-02-23 18:34:13] 2025-02-23 17:27:16,210 | INFO     | -- intersect: -2861136617.606752
[2025-02-23 18:34:13] 2025-02-23 17:27:16,211 | INFO     | intersect: -2861136617.606752
[2025-02-23 18:34:13] 2025-02-23 17:27:16,211 | INFO     | chi2: 0.0012277134974648758
[2025-02-23 18:34:13] 2025-02-23 17:27:16,211 | INFO     | current chi2=0.0012277134974648758 (change=55.37596723804536 %)
[2025-02-23 18:34:13] 2025-02-23 17:27:16,212 | INFO     | model: linear, x: [1740312837.0, 1740312898.0, 1740312959.0, 1740313020.0, 1740313081.0, 1740313142.0, 1740313203.0, 1740313264.0, 1740313325.0, 1740313386.0, 1740
[2025-02-23 18:34:13] 2025-02-23 17:27:16,212 | INFO     | sum of square deviations: 9059954057.0
[2025-02-23 18:34:13] 2025-02-23 17:27:16,214 | INFO     | sum of deviations: 14119437345.999996
[2025-02-23 18:34:13] 2025-02-23 17:27:16,215 | INFO     | mean x: 1740322200.5
[2025-02-23 18:34:13] 2025-02-23 17:27:16,215 | INFO     | mean y: 2376840.0974025973
[2025-02-23 18:34:13] 2025-02-23 17:27:16,215 | INFO     | -- intersect: -2709819062.5768743
[2025-02-23 18:34:13] 2025-02-23 17:27:16,215 | INFO     | intersect: -2709819062.5768743
[2025-02-23 18:34:13] 2025-02-23 17:27:16,215 | INFO     | chi2: 0.0009420615441420838
[2025-02-23 18:34:13] 2025-02-23 17:27:16,216 | INFO     | current chi2=0.0009420615441420838 (change=23.266988097193604 %)
[2025-02-23 18:34:13] 2025-02-23 17:27:16,216 | INFO     | left removable region: 60
[2025-02-23 18:34:13] 2025-02-23 17:27:16,216 | INFO     | model: linear, x: [1740314667.0, 1740314728.0, 1740314789.0, 1740314850.0, 1740314911.0, 1740314972.0, 1740315033.0, 1740315094.0, 1740315155.0, 1740315216.0, 1740
[2025-02-23 18:34:13] 2025-02-23 17:27:16,217 | INFO     | sum of square deviations: 6239923508.0
[2025-02-23 18:34:13] 2025-02-23 17:27:16,219 | INFO     | sum of deviations: 7907302540.499998
[2025-02-23 18:34:13] 2025-02-23 17:27:16,219 | INFO     | mean x: 1740322932.5
[2025-02-23 18:34:13] 2025-02-23 17:27:16,219 | INFO     | mean y: 2378904.1139705884
[2025-02-23 18:34:13] 2025-02-23 17:27:16,219 | INFO     | -- intersect: -2202978249.3519006
[2025-02-23 18:34:13] 2025-02-23 17:27:16,219 | INFO     | intersect: -2202978249.3519006
[2025-02-23 18:34:13] 2025-02-23 17:27:16,220 | INFO     | chi2: 0.00038999587231692314
[2025-02-23 18:34:13] 2025-02-23 17:27:16,220 | INFO     | -- intersect: -2202978249.3519006
[2025-02-23 18:34:13] 2025-02-23 17:27:16,220 | INFO     | current memory leak: 1.27 B/s (using 272 data points, chi2=0.00)
[2025-02-23 18:34:13] 2025-02-23 17:27:16,221 | INFO     | ..............................
[2025-02-23 18:34:13] 2025-02-23 17:27:16,221 | INFO     | . Timing measurements:
[2025-02-23 18:34:13] 2025-02-23 17:27:16,221 | INFO     | . get job = 0 s
[2025-02-23 18:34:13] 2025-02-23 17:27:16,221 | INFO     | . initial setup = 1 s
[2025-02-23 18:34:13] 2025-02-23 17:27:16,222 | INFO     | . payload setup = 8 s
[2025-02-23 18:34:13] 2025-02-23 17:27:16,222 | INFO     | . stage-in = 0 s
[2025-02-23 18:34:13] 2025-02-23 17:27:16,222 | INFO     | . payload execution = 20624 s
[2025-02-23 18:34:13] 2025-02-23 17:27:16,222 | INFO     | . stage-out = 1 s
[2025-02-23 18:34:13] 2025-02-23 17:27:16,222 | INFO     | . log creation = 0 s
[2025-02-23 18:34:13] 2025-02-23 17:27:16,222 | INFO     | ..............................
[2025-02-23 18:34:13] 2025-02-23 17:27:16,329 | INFO     | 
[2025-02-23 18:34:13] 2025-02-23 17:27:16,329 | INFO     | job summary report
[2025-02-23 18:34:13] 2025-02-23 17:27:16,330 | INFO     | --------------------------------------------------
[2025-02-23 18:34:13] 2025-02-23 17:27:16,330 | INFO     | PanDA job id: 6520973424
[2025-02-23 18:34:13] 2025-02-23 17:27:16,330 | INFO     | task id: 43078919
[2025-02-23 18:34:13] 2025-02-23 17:27:16,330 | INFO     | errors: (none)
[2025-02-23 18:34:13] 2025-02-23 17:27:16,330 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-23 18:34:13] 2025-02-23 17:27:16,330 | INFO     | pilot state: finished 
[2025-02-23 18:34:13] 2025-02-23 17:27:16,330 | INFO     | transexitcode: 0
[2025-02-23 18:34:13] 2025-02-23 17:27:16,330 | INFO     | exeerrorcode: 0
[2025-02-23 18:34:13] 2025-02-23 17:27:16,331 | INFO     | exeerrordiag: 
[2025-02-23 18:34:13] 2025-02-23 17:27:16,331 | INFO     | exitcode: 0
[2025-02-23 18:34:13] 2025-02-23 17:27:16,331 | INFO     | exitmsg: OK
[2025-02-23 18:34:13] 2025-02-23 17:27:16,331 | INFO     | cpuconsumptiontime: 78691 s
[2025-02-23 18:34:13] 2025-02-23 17:27:16,331 | INFO     | nevents: 400
[2025-02-23 18:34:13] 2025-02-23 17:27:16,331 | INFO     | neventsw: 0
[2025-02-23 18:34:13] 2025-02-23 17:27:16,331 | INFO     | pid: 3697058
[2025-02-23 18:34:13] 2025-02-23 17:27:16,331 | INFO     | pgrp: 3697058
[2025-02-23 18:34:13] 2025-02-23 17:27:16,332 | INFO     | corecount: 4
[2025-02-23 18:34:13] 2025-02-23 17:27:16,332 | INFO     | event service: False
[2025-02-23 18:34:13] 2025-02-23 17:27:16,332 | INFO     | sizes: {0: 2383199, 1: 2383398, 7: 2383604, 12: 2383632, 20636: 2416604, 20637: 2416603, 20638: 2425806, 20645: 2425920}
[2025-02-23 18:34:13] 2025-02-23 17:27:16,332 | INFO     | --------------------------------------------------
[2025-02-23 18:34:13] 2025-02-23 17:27:16,332 | INFO     | 
[2025-02-23 18:34:13] 2025-02-23 17:27:16,332 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2025-02-23 18:34:13] 2025-02-23 17:27:16,367 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-23 18:34:13] 2025-02-23 17:27:16,367 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-23 18:34:13] 2025-02-23 17:27:16,367 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-23 18:34:13] 2025-02-23 17:27:16,368 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-23 18:34:13] 2025-02-23 17:27:16,368 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-23 18:34:13] 2025-02-23 17:27:16,368 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-23 18:34:13] 2025-02-23 17:27:16,368 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-23 18:34:13] 2025-02-23 17:27:16,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-23 18:34:13] 2025-02-23 17:27:16,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-23 18:34:13] 2025-02-23 17:27:16,368 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-23 18:34:13] 2025-02-23 17:27:16,368 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-23 18:34:13] 2025-02-23 17:27:16,368 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-23 18:34:13] 2025-02-23 17:27:16,368 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-23 18:34:13] 2025-02-23 17:27:16,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-23 18:34:13] 2025-02-23 17:27:16,369 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-23 18:34:13] 2025-02-23 17:27:16,369 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-23 18:34:13] 2025-02-23 17:27:16,369 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-23 18:34:13] 2025-02-23 17:27:16,369 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-23 18:34:13] 2025-02-23 17:27:16,369 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-23 18:34:13] 2025-02-23 17:27:16,369 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-23 18:34:13] 2025-02-23 17:27:16,369 | INFO     | job 6520973424 has completed (purged errors)
[2025-02-23 18:34:13] 2025-02-23 17:27:16,369 | INFO     | overall cleanup function is called
[2025-02-23 18:34:13] 2025-02-23 17:27:16,381 | INFO     | PID=3689255 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-02-23 18:34:13] 2025-02-23 17:27:16,382 | INFO     | .. there are 20 such processes running
[2025-02-23 18:34:13] 2025-02-23 17:27:16,512 | WARNING  | process 3697058 can no longer be monitored (due to stat problems) - aborting
[2025-02-23 18:34:13] 2025-02-23 17:27:17,037 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-02-23 18:34:13] 2025-02-23 17:27:17,038 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-02-23 18:34:13] 2025-02-23 17:27:17,039 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6520973424/payload.stdout) since it has not been created yet
[2025-02-23 18:34:13] 2025-02-23 17:27:17,039 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2025-02-23 18:34:13] 2025-02-23 17:27:17,063 | INFO     | sufficient remaining disk space (3214277607424 B)
[2025-02-23 18:34:13] 2025-02-23 17:27:17,063 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-02-23 18:34:13] 2025-02-23 17:27:17,064 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6520973424/HITS.43078919._078364.pool.root.1 since it does not exist
[2025-02-23 18:34:13] 2025-02-23 17:27:17,381 | INFO     | --- collectZombieJob: --- 10, [3697058]
[2025-02-23 18:34:13] 2025-02-23 17:27:17,381 | INFO     | zombie collector waiting for pid 3697058
[2025-02-23 18:34:13] 2025-02-23 17:27:17,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-23 18:34:13] 2025-02-23 17:27:17,381 | INFO     | collected zombie processes
[2025-02-23 18:34:13] 2025-02-23 17:27:17,381 | INFO     | will attempt to kill all subprocesses of pid=3697058
[2025-02-23 18:34:13] 2025-02-23 17:27:17,423 | INFO     | number of running child processes to parent process 3697058: 1
[2025-02-23 18:34:13] 2025-02-23 17:27:17,423 | INFO     | maximum number of monitored processes: 6
[2025-02-23 18:34:13] 2025-02-23 17:27:17,424 | INFO     | aborting job monitoring since job object (job id=6520973424) has expired
[2025-02-23 18:34:13] 2025-02-23 17:27:17,734 | INFO     | process IDs to be killed: [3697058] (in reverse order)
[2025-02-23 18:34:13] 2025-02-23 17:27:18,004 | WARNING  | found no corresponding commands to process id(s)
[2025-02-23 18:34:13] 2025-02-23 17:27:18,005 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-23 18:34:13] 2025-02-23 17:27:18,031 | INFO     | did not find any defunct processes belonging to 3697058
[2025-02-23 18:34:13] 2025-02-23 17:27:18,053 | INFO     | did not find any defunct processes belonging to 3697058
[2025-02-23 18:34:13] 2025-02-23 17:27:18,053 | INFO     | ready for new job
[2025-02-23 18:34:13] 2025-02-23 17:27:18,053 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-23 18:34:13] 2025-02-23 17:27:18,056 | INFO     | **************************************
[2025-02-23 18:34:13] 2025-02-23 17:27:18,056 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-23 18:34:13] 2025-02-23 17:27:18,056 | INFO     | **************************************
[2025-02-23 18:34:13] 2025-02-23 17:27:18,056 | INFO     | 
[2025-02-23 18:34:13] 2025-02-23 17:27:18,065 | INFO     | architecture information:
[2025-02-23 18:34:13] 2025-02-23 17:27:18,065 | INFO     | executing command: cat /etc/os-release
[2025-02-23 18:34:13] 2025-02-23 17:27:18,088 | INFO     | cat /etc/os-release:
[2025-02-23 18:34:13] NAME="CentOS Linux"
[2025-02-23 18:34:13] VERSION="7 (Core)"
[2025-02-23 18:34:13] ID="centos"
[2025-02-23 18:34:13] ID_LIKE="rhel fedora"
[2025-02-23 18:34:13] VERSION_ID="7"
[2025-02-23 18:34:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-23 18:34:13] ANSI_COLOR="0;31"
[2025-02-23 18:34:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-23 18:34:13] HOME_URL="https://www.centos.org/"
[2025-02-23 18:34:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-23 18:34:13] 
[2025-02-23 18:34:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-23 18:34:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-23 18:34:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-23 18:34:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-23 18:34:13] 
[2025-02-23 18:34:13] 2025-02-23 17:27:18,088 | INFO     | **************************************
[2025-02-23 18:34:13] 2025-02-23 17:27:18,590 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2025-02-23 18:34:13] 2025-02-23 17:27:18,616 | INFO     | sufficient remaining disk space (3214194769920 B)
[2025-02-23 18:34:13] 2025-02-23 17:27:18,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-23 18:34:13] 2025-02-23 17:27:18,617 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-23 18:34:13] 2025-02-23 17:27:18,617 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-23 18:34:13] 2025-02-23 17:27:18,617 | INFO     | aborting loop
[2025-02-23 18:34:13] 2025-02-23 17:27:18,617 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-23 18:34:13] 2025-02-23 17:27:18,618 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-23 18:34:13] 2025-02-23 17:27:18,619 | INFO     | found 0 job(s) in 20 queues
[2025-02-23 18:34:13] 2025-02-23 17:27:18,619 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-23 18:34:13] 2025-02-23 17:27:18,619 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-23 18:34:13] 2025-02-23 17:27:19,509 | INFO     | all data control threads have been joined
[2025-02-23 18:34:13] 2025-02-23 17:27:19,621 | INFO     | [job] retrieve thread has finished
[2025-02-23 18:34:13] 2025-02-23 17:27:19,622 | INFO     | [job] job monitor thread has finished
[2025-02-23 18:34:13] 2025-02-23 17:27:19,703 | INFO     | [payload] failed_post thread has finished
[2025-02-23 18:34:13] 2025-02-23 17:27:19,710 | INFO     | all job control threads have been joined
[2025-02-23 18:34:13] 2025-02-23 17:27:19,756 | INFO     | [data] copytool_in thread has finished
[2025-02-23 18:34:13] 2025-02-23 17:27:19,924 | INFO     | [job] validate thread has finished
[2025-02-23 18:34:13] 2025-02-23 17:27:20,002 | INFO     | all payload control threads have been joined
[2025-02-23 18:34:13] 2025-02-23 17:27:20,270 | INFO     | [job] create_data_payload thread has finished
[2025-02-23 18:34:13] 2025-02-23 17:27:20,277 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-23 18:34:13] 2025-02-23 17:27:20,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-23 18:34:13] 2025-02-23 17:27:20,352 | INFO     | [payload] validate_post thread has finished
[2025-02-23 18:34:13] 2025-02-23 17:27:20,431 | INFO     | [payload] validate_pre thread has finished
[2025-02-23 18:34:13] 2025-02-23 17:27:20,515 | INFO     | [data] control thread has finished
[2025-02-23 18:34:13] 2025-02-23 17:27:20,623 | INFO     | [data] copytool_out thread has finished
[2025-02-23 18:34:13] 2025-02-23 17:27:20,715 | INFO     | [job] control thread has finished
[2025-02-23 18:34:13] 2025-02-23 17:27:20,738 | INFO     | [payload] execute_payloads thread has finished
[2025-02-23 18:34:13] 2025-02-23 17:27:21,007 | INFO     | [payload] control thread has finished
[2025-02-23 18:34:13] 2025-02-23 17:27:21,339 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-23 18:34:13] 2025-02-23 17:27:22,344 | INFO     | [job] queue monitor thread has finished
[2025-02-23 18:34:13] 2025-02-23 17:27:24,292 | INFO     | [data] queue_monitor thread has finished
[2025-02-23 18:34:13] 2025-02-23 17:27:24,511 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23009651631936)>', '<ExcThread(monitor, started 23009419036416)>']
[2025-02-23 18:34:13] 2025-02-23 17:27:24,648 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-23 18:34:13] 2025-02-23 17:27:24,648 | INFO     | [monitor] control thread has ended
[2025-02-23 18:34:13] 2025-02-23 17:27:29,517 | INFO     | all workflow threads have been joined
[2025-02-23 18:34:13] 2025-02-23 17:27:29,517 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-23 18:34:13] 2025-02-23 17:27:29,518 | INFO     | traces error code: 0
[2025-02-23 18:34:13] 2025-02-23 17:27:29,518 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-23 18:34:13] 2025-02-23 17:27:29,695 [wrapper] ==== pilot stdout END ====
[2025-02-23 18:34:13] 2025-02-23 17:27:29,699 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-23 18:34:13] 2025-02-23 17:27:29,704 [wrapper] pilotpid: 3689255
[2025-02-23 18:34:13] 2025-02-23 17:27:29,709 [wrapper] Pilot exit status: 0
[2025-02-23 18:34:13] 2025-02-23 17:27:29,725 [wrapper] pandaids: 6520973424
[2025-02-23 18:34:13] 2025-02-23 17:27:29,875 [wrapper] cleanup supervisor_pilot  643144 3689256
[2025-02-23 18:34:13] 2025-02-23 17:27:29,880 [wrapper] Test setup, not cleaning
[2025-02-23 18:34:13] 2025-02-23 17:27:29,888 [wrapper] apfmon messages muted
[2025-02-23 18:34:13] 2025-02-23 17:27:29,892 [wrapper] ==== wrapper stdout END ====
[2025-02-23 18:34:13] 2025-02-23 17:27:29,896 [wrapper] ==== wrapper stderr END ====
[2025-02-23 18:34:13]  *** Error codes and diagnostics ***
[2025-02-23 18:34:13]     "exeErrorCode": 0,
[2025-02-23 18:34:13]     "exeErrorDiag": "",
[2025-02-23 18:34:13]     "pilotErrorCode": 0,
[2025-02-23 18:34:13]     "pilotErrorDiag": "",
[2025-02-23 18:34:13]  *** Listing of results directory ***
[2025-02-23 18:34:13] total 660284
[2025-02-23 18:34:13] -rw-r--r-- 1 boinc boinc    491065 Feb 20 16:24 pilot3.tar.gz
[2025-02-23 18:34:13] -rw-r--r-- 1 boinc boinc      5118 Feb 20 17:07 queuedata.json
[2025-02-23 18:34:13] -rwx------ 1 boinc boinc     35865 Feb 20 17:08 runpilot2-wrapper.sh
[2025-02-23 18:34:13] -rw-r--r-- 1 boinc boinc       100 Feb 23 12:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-23 18:34:13] -rwxr-xr-x 1 boinc boinc      7986 Feb 23 12:42 run_atlas
[2025-02-23 18:34:13] -rw-r--r-- 1 boinc boinc       105 Feb 23 12:42 job.xml
[2025-02-23 18:34:13] -rw-r--r-- 1 boinc boinc      6676 Feb 23 12:42 init_data.xml
[2025-02-23 18:34:13] -rw-r--r-- 2 boinc boinc 340990084 Feb 23 12:42 EVNT.43078917._001955.pool.root.1
[2025-02-23 18:34:13] drwxrwx--x 2 boinc boinc      4096 Feb 23 12:42 shared
[2025-02-23 18:34:13] -rw-r--r-- 2 boinc boinc    503566 Feb 23 12:42 input.tar.gz
[2025-02-23 18:34:13] -rw-r--r-- 2 boinc boinc     17569 Feb 23 12:42 start_atlas.sh
[2025-02-23 18:34:13] -rw-r--r-- 1 boinc boinc         0 Feb 23 12:42 boinc_lockfile
[2025-02-23 18:34:13] -rw-r--r-- 1 boinc boinc      2545 Feb 23 12:42 pandaJob.out
[2025-02-23 18:34:13] -rw------- 1 boinc boinc       424 Feb 23 12:42 setup.sh.local
[2025-02-23 18:34:13] -rw------- 1 boinc boinc    987728 Feb 23 12:42 agis_schedconf.cvmfs.json
[2025-02-23 18:34:13] drwx------ 4 boinc boinc      4096 Feb 23 12:42 pilot3
[2025-02-23 18:34:13] -rw-r--r-- 1 boinc boinc       530 Feb 23 18:26 boinc_task_state.xml
[2025-02-23 18:34:13] -rw------- 1 boinc boinc 325737144 Feb 23 18:26 HITS.43078919._078364.pool.root.1
[2025-02-23 18:34:13] -rw------- 1 boinc boinc      1032 Feb 23 18:27 memory_monitor_summary.json
[2025-02-23 18:34:13] -rw------- 1 boinc boinc   1582569 Feb 23 18:27 agis_ddmendpoints.agis.ALL.json
[2025-02-23 18:34:13] -rw------- 1 boinc boinc        95 Feb 23 18:27 pilot_heartbeat.json
[2025-02-23 18:34:13] -rw------- 1 boinc boinc    430584 Feb 23 18:27 log.43078919._078364.job.log.tgz.1
[2025-02-23 18:34:13] -rw------- 1 boinc boinc      7698 Feb 23 18:27 heartbeat.json
[2025-02-23 18:34:13] -rw------- 1 boinc boinc      4349 Feb 23 18:27 pilotlog.txt
[2025-02-23 18:34:13] -rw------- 1 boinc boinc   2366282 Feb 23 18:27 log.43078919._078364.job.log.1
[2025-02-23 18:34:13] -rw------- 1 boinc boinc       357 Feb 23 18:27 output.list
[2025-02-23 18:34:13] -rw-r--r-- 1 boinc boinc       620 Feb 23 18:27 runtime_log
[2025-02-23 18:34:13] -rw------- 1 boinc boinc   2816000 Feb 23 18:27 result.tar.gz
[2025-02-23 18:34:13] -rw------- 1 boinc boinc       666 Feb 23 18:27 uaYLDm0GO56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmIYqKDmG6Qs0m.diag
[2025-02-23 18:34:13] -rw-r--r-- 1 boinc boinc     11424 Feb 23 18:27 runtime_log.err
[2025-02-23 18:34:13] -rw-r--r-- 1 boinc boinc        27 Feb 23 18:33 wrapper_checkpoint.txt
[2025-02-23 18:34:13] -rw-r--r-- 1 boinc boinc      8192 Feb 23 18:34 boinc_mmap_file
[2025-02-23 18:34:13] -rw-r--r-- 1 boinc boinc     21824 Feb 23 18:34 stderr.txt
[2025-02-23 18:34:13] HITS file was successfully produced:
[2025-02-23 18:34:13] -rw------- 1 boinc boinc 325737144 Feb 23 18:26 shared/HITS.pool.root.1
[2025-02-23 18:34:13]  *** Contents of shared directory: ***
[2025-02-23 18:34:13] total 654376
[2025-02-23 18:34:13] -rw-r--r-- 2 boinc boinc 340990084 Feb 23 12:42 ATLAS.root_0
[2025-02-23 18:34:13] -rw-r--r-- 2 boinc boinc    503566 Feb 23 12:42 input.tar.gz
[2025-02-23 18:34:13] -rw-r--r-- 2 boinc boinc     17569 Feb 23 12:42 start_atlas.sh
[2025-02-23 18:34:13] -rw------- 1 boinc boinc 325737144 Feb 23 18:26 HITS.pool.root.1
[2025-02-23 18:34:13] -rw------- 1 boinc boinc   2816000 Feb 23 18:27 result.tar.gz
18:34:14 (3685299): run_atlas exited; CPU time 78430.320815
18:34:14 (3685299): called boinc_finish(0)

</stderr_txt>
]]>

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