Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-20 10:29:51 (7228): Detected: vboxwrapper 26206
2025-02-20 10:29:51 (7228): Detected: BOINC client v8.0.2
2025-02-20 10:29:51 (7228): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-02-20 10:29:51 (7228): Successfully copied 'init_data.xml' to the shared directory.
2025-02-20 10:29:52 (7228): Create VM. (boinc_8e6b1261268af96f, slot#13)
2025-02-20 10:29:52 (7228): Setting Memory Size for VM. (4800MB)
2025-02-20 10:29:53 (7228): Setting CPU Count for VM. (8)
2025-02-20 10:29:53 (7228): Setting Chipset Options for VM.
2025-02-20 10:29:53 (7228): Setting Graphics Controller Options for VM.
2025-02-20 10:29:53 (7228): Setting Boot Options for VM.
2025-02-20 10:29:54 (7228): Setting Network Configuration for NAT.
2025-02-20 10:29:54 (7228): Enabling VM Network Access.
2025-02-20 10:29:54 (7228): Disabling USB Support for VM.
2025-02-20 10:29:55 (7228): Disabling COM Port Support for VM.
2025-02-20 10:29:55 (7228): Disabling LPT Port Support for VM.
2025-02-20 10:29:55 (7228): Disabling Audio Support for VM.
2025-02-20 10:29:55 (7228): Disabling Clipboard Support for VM.
2025-02-20 10:29:56 (7228): Disabling Drag and Drop Support for VM.
2025-02-20 10:29:56 (7228): Adding storage controller(s) to VM.
2025-02-20 10:29:56 (7228): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-20 10:29:57 (7228): Adding VirtualBox Guest Additions to VM.
2025-02-20 10:29:57 (7228): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-20 10:29:57 (7228): forwarding host port 54698 to guest port 80
2025-02-20 10:29:57 (7228): Enabling remote desktop for VM.
2025-02-20 10:29:58 (7228): Required extension pack not installed, remote desktop not enabled.
2025-02-20 10:29:58 (7228): Enabling shared directory for VM.
2025-02-20 10:29:58 (7228): Starting VM using VBoxManage interface. (boinc_8e6b1261268af96f, slot#13)
2025-02-20 10:30:07 (7228): Successfully started VM. (PID = '12136')
2025-02-20 10:30:07 (7228): Reporting VM Process ID to BOINC.
2025-02-20 10:30:07 (7228): Guest Log: BIOS: VirtualBox 7.1.4
2025-02-20 10:30:07 (7228): Guest Log: CPUID EDX: 0x178bfbff
2025-02-20 10:30:07 (7228): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-20 10:30:07 (7228): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-20 10:30:07 (7228): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-20 10:30:07 (7228): Detected: Web Application Enabled (http://localhost:54698)
2025-02-20 10:30:07 (7228): Preference change detected
2025-02-20 10:30:07 (7228): Setting CPU throttle for VM. (100%)
2025-02-20 10:30:07 (7228): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 240 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-20 10:30:09 (7228): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-20 10:30:09 (7228): Guest Log: BIOS: Booting from Hard Disk...
2025-02-20 10:30:12 (7228): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-20 10:30:12 (7228): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-20 10:30:12 (7228): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-20 10:30:22 (7228): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-20 10:30:22 (7228): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-20 10:30:37 (7228): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-20 10:30:37 (7228): Guest Log: 00:00:00.000249 main     Log opened 2025-02-20T10:30:34.397976000Z
2025-02-20 10:30:37 (7228): Guest Log: 00:00:00.000468 main     OS Product: Linux
2025-02-20 10:30:37 (7228): Guest Log: 00:00:00.000543 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-20 10:30:37 (7228): Guest Log: 00:00:00.000610 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-20 10:30:37 (7228): Guest Log: 00:00:00.000677 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-20 10:30:37 (7228): Guest Log: 00:00:00.000680 main     Process ID: 1376
2025-02-20 10:30:37 (7228): Guest Log: 00:00:00.000681 main     Package type: LINUX_64BITS_GENERIC
2025-02-20 10:30:37 (7228): Guest Log: 00:00:00.003296 main     5.2.32 r132073 started. Verbose level = 0
2025-02-20 10:30:37 (7228): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-20 10:30:37 (7228): Guest Log: [INFO] Mounting shared directory
2025-02-20 10:30:37 (7228): Guest Log: [INFO] Checking for init_data.xml
2025-02-20 10:30:45 (7228): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-20 10:30:45 (7228): Guest Log: [INFO] Detected branch: prod
2025-02-20 10:30:45 (7228): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-20 10:30:45 (7228): Guest Log: Copying input files
2025-02-20 10:30:47 (7228): Guest Log: 00:00:10.006559 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 938 571 000ns (GuestNow=1 740 076 246 342 387 000 ns GuestLast=1 740 047 434 403 816 000 ns fSetTimeLastLoop=true )
2025-02-20 10:30:49 (7228): Guest Log: Copied input files into RunAtlas.
2025-02-20 10:30:49 (7228): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-20 10:30:49 (7228): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-20 10:30:49 (7228): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-20 10:30:49 (7228): Guest Log: Further information can be found at the LHC@home message board.
2025-02-20 10:31:00 (7228): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-20 10:31:00 (7228): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-20 10:31:00 (7228): Guest Log: 2.6.3.0 1657 0 30176 142873 3 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-20 10:31:03 (7228): Guest Log: copied the webapp to /var/www
2025-02-20 10:31:03 (7228): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-20 10:31:03 (7228): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-20 10:31:03 (7228): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-20 10:31:04 (7228): Guest Log:  *** Starting ATLAS job. (PandaID=6520972742 taskID=43205075) ***
2025-02-20 12:10:13 (7228): Status Report: Elapsed Time: '6000.000000'
2025-02-20 12:10:13 (7228): Status Report: CPU Time: '21849.515625'
2025-02-20 13:50:20 (7228): Status Report: Elapsed Time: '12000.000000'
2025-02-20 13:50:20 (7228): Status Report: CPU Time: '66024.328125'
2025-02-20 15:30:27 (7228): Status Report: Elapsed Time: '18000.000000'
2025-02-20 15:30:27 (7228): Status Report: CPU Time: '110533.765625'
2025-02-20 17:10:33 (7228): Status Report: Elapsed Time: '24000.000000'
2025-02-20 17:10:33 (7228): Status Report: CPU Time: '155121.609375'
2025-02-20 18:50:40 (7228): Status Report: Elapsed Time: '30000.000000'
2025-02-20 18:50:40 (7228): Status Report: CPU Time: '199535.984375'
2025-02-20 20:30:47 (7228): Status Report: Elapsed Time: '36000.000000'
2025-02-20 20:30:47 (7228): Status Report: CPU Time: '243795.296875'
2025-02-20 22:10:53 (7228): Status Report: Elapsed Time: '42000.000000'
2025-02-20 22:10:53 (7228): Status Report: CPU Time: '288411.796875'
2025-02-20 23:51:00 (7228): Status Report: Elapsed Time: '48000.736446'
2025-02-20 23:51:00 (7228): Status Report: CPU Time: '332906.953125'
2025-02-21 01:31:07 (7228): Status Report: Elapsed Time: '54001.110956'
2025-02-21 01:31:07 (7228): Status Report: CPU Time: '377179.421875'
2025-02-21 02:33:29 (7228): Guest Log:  *** Job finished ***
2025-02-21 02:33:29 (7228): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-21 02:33:29 (7228): Guest Log: 2025-02-21 10:33:04,652 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-02-21 02:33:29 (7228): Guest Log: 2025-02-21 10:33:05,388 | INFO     | [data] copytool_out thread has finished
2025-02-21 02:33:29 (7228): Guest Log: 2025-02-21 10:33:08,771 | INFO     | [data] queue_monitor thread has finished
2025-02-21 02:33:29 (7228): Guest Log: 2025-02-21 10:33:10,168 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140454686328640)>', '<ExcThread(monitor, started 140453869508352)>']
2025-02-21 02:33:29 (7228): Guest Log: 2025-02-21 10:33:10,684 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-21 02:33:29 (7228): Guest Log: 2025-02-21 10:33:10,685 | INFO     | [monitor] control thread has ended
2025-02-21 02:33:29 (7228): Guest Log: 2025-02-21 10:33:15,174 | INFO     | all workflow threads have been joined
2025-02-21 02:33:29 (7228): Guest Log: 2025-02-21 10:33:15,175 | INFO     | end of generic workflow (traces error code: 0)
2025-02-21 02:33:29 (7228): Guest Log: 2025-02-21 10:33:15,175 | INFO     | traces error code: 0
2025-02-21 02:33:29 (7228): Guest Log: 2025-02-21 10:33:15,175 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-21 02:33:29 (7228): Guest Log: 2025-02-21 10:33:15,383 [wrapper] ==== pilot stdout END ====
2025-02-21 02:33:29 (7228): Guest Log: 2025-02-21 10:33:15,397 [wrapper] ==== wrapper stdout RESUME ====
2025-02-21 02:33:29 (7228): Guest Log: 2025-02-21 10:33:15,410 [wrapper] pilotpid: 6052
2025-02-21 02:33:29 (7228): Guest Log: 2025-02-21 10:33:15,421 [wrapper] Pilot exit status: 0
2025-02-21 02:33:29 (7228): Guest Log: 2025-02-21 10:33:26,169 [wrapper] pandaids: 6520972742
2025-02-21 02:33:29 (7228): Guest Log: 2025-02-21 10:33:26,262 [wrapper] cleanup supervisor_pilot 18790 6053
2025-02-21 02:33:29 (7228): Guest Log: 2025-02-21 10:33:26,283 [wrapper] Test setup, not cleaning
2025-02-21 02:33:29 (7228): Guest Log: 2025-02-21 10:33:26,306 [wrapper] apfmon messages muted
2025-02-21 02:33:29 (7228): Guest Log: 2025-02-21 10:33:26,319 [wrapper] ==== wrapper stdout END ====
2025-02-21 02:33:29 (7228): Guest Log: 2025-02-21 10:33:26,331 [wrapper] ==== wrapper stderr END ====
2025-02-21 02:33:29 (7228): Guest Log:  *** Error codes and diagnostics ***
2025-02-21 02:33:29 (7228): Guest Log:     "exeErrorCode": 0,
2025-02-21 02:33:29 (7228): Guest Log:     "exeErrorDiag": "",
2025-02-21 02:33:29 (7228): Guest Log:     "pilotErrorCode": 0,
2025-02-21 02:33:29 (7228): Guest Log:     "pilotErrorDiag": "",
2025-02-21 02:33:29 (7228): Guest Log:  *** Listing of results directory ***
2025-02-21 02:33:29 (7228): Guest Log: total 335028
2025-02-21 02:33:29 (7228): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 20 15:02 pilot3.tar.gz
2025-02-21 02:33:29 (7228): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 20 15:19 queuedata.json
2025-02-21 02:33:29 (7228): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 20 15:19 runpilot2-wrapper.sh
2025-02-21 02:33:29 (7228): Guest Log: -rwxr-xr-x. 1 atlas atlas      6226 Feb 20 18:30 init_data.xml
2025-02-21 02:33:29 (7228): Guest Log: -rwxr-xr-x. 1 atlas atlas    503558 Feb 20 18:30 input.tar.gz
2025-02-21 02:33:29 (7228): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 20 18:30 start_atlas.sh
2025-02-21 02:33:29 (7228): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 20 18:30 EVNT.43092757._000538.pool.root.1 -> /data/./ATLAS.root_0
2025-02-21 02:33:29 (7228): Guest Log: -rw-r--r--. 1 atlas atlas      2555 Feb 20 18:31 pandaJob.out
2025-02-21 02:33:29 (7228): Guest Log: -rw-------. 1 atlas atlas       424 Feb 20 18:31 setup.sh.local
2025-02-21 02:33:29 (7228): Guest Log: -rw-------. 1 atlas atlas    994379 Feb 20 18:34 agis_schedconf.cvmfs.json
2025-02-21 02:33:29 (7228): Guest Log: drwx------. 4 atlas atlas      4096 Feb 20 18:34 pilot3
2025-02-21 02:33:29 (7228): Guest Log: -rw-------. 1 atlas atlas 326870683 Feb 21 10:30 HITS.43205075._055031.pool.root.1
2025-02-21 02:33:29 (7228): Guest Log: -rw-------. 1 atlas atlas      1032 Feb 21 10:32 memory_monitor_summary.json
2025-02-21 02:33:29 (7228): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 21 10:32 agis_ddmendpoints.agis.ALL.json
2025-02-21 02:33:29 (7228): Guest Log: -rw-------. 1 atlas atlas    823793 Feb 21 10:32 log.43205075._055031.job.log.tgz.1
2025-02-21 02:33:29 (7228): Guest Log: -rw-------. 1 atlas atlas        95 Feb 21 10:32 pilot_heartbeat.json
2025-02-21 02:33:29 (7228): Guest Log: -rw-------. 1 atlas atlas      7713 Feb 21 10:32 heartbeat.json
2025-02-21 02:33:29 (7228): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 21 10:33 pilotlog.txt
2025-02-21 02:33:29 (7228): Guest Log: -rw-------. 1 atlas atlas   5406236 Feb 21 10:33 log.43205075._055031.job.log.1
2025-02-21 02:33:29 (7228): Guest Log: -rw-------. 1 atlas atlas       357 Feb 21 10:33 output.list
2025-02-21 02:33:29 (7228): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 21 10:33 runtime_log
2025-02-21 02:33:29 (7228): Guest Log: -rw-------. 1 atlas atlas   6246400 Feb 21 10:33 result.tar.gz
2025-02-21 02:33:29 (7228): Guest Log: -rw-r--r--. 1 atlas atlas     10908 Feb 21 10:33 runtime_log.err
2025-02-21 02:33:29 (7228): Guest Log: -rw-------. 1 atlas atlas       655 Feb 21 10:33 q3dKDm3VN56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmeTqKDmU8cZpn.diag
2025-02-21 02:33:29 (7228): Guest Log: Looking for outputfile HITS.43205075._055031.pool.root.1
2025-02-21 02:33:29 (7228): Guest Log: HITS file was successfully produced
2025-02-21 02:33:29 (7228): Guest Log: -rw-------. 1 atlas atlas 326870683 Feb 21 10:30 /home/atlas/RunAtlas/HITS.43205075._055031.pool.root.1
2025-02-21 02:33:33 (7228): Guest Log: Successfully finished the ATLAS job!
2025-02-21 02:33:33 (7228): Guest Log: Copying the results back to the shared directory!
2025-02-21 02:33:33 (7228): Guest Log:  *** Contents of shared directory: ***
2025-02-21 02:33:33 (7228): Guest Log: total 660304
2025-02-21 02:33:33 (7228): Guest Log: -rwxrwxrwx. 1 root root 342498686 Feb 20 18:29 ATLAS.root_0
2025-02-21 02:33:33 (7228): Guest Log: -rwxrwxrwx. 1 root root 326870683 Feb 21 10:33 HITS.pool.root.1
2025-02-21 02:33:33 (7228): Guest Log: -rwxrwxrwx. 1 root root      6226 Feb 20 18:29 init_data.xml
2025-02-21 02:33:33 (7228): Guest Log: -rwxrwxrwx. 1 root root    503558 Feb 20 18:28 input.tar.gz
2025-02-21 02:33:33 (7228): Guest Log: -rwxrwxrwx. 1 root root   6246400 Feb 21 10:33 result.tar.gz
2025-02-21 02:33:33 (7228): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 20 18:28 start_atlas.sh
2025-02-21 02:33:33 (7228): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-21 02:33:33 (7228): VM Completion File Detected.
2025-02-21 02:33:33 (7228): Powering off VM.
2025-02-21 02:33:36 (7228): Successfully stopped VM.
2025-02-21 02:33:36 (7228): Deregistering VM. (boinc_8e6b1261268af96f, slot#13)
2025-02-21 02:33:36 (7228): Removing network bandwidth throttle group from VM.
2025-02-21 02:33:37 (7228): Removing VM from VirtualBox.
02:33:42 (7228): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN