Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:32:52 (4046497): wrapper (7.7.26015): starting
16:32:52 (4046497): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 16:32:52] Arguments: --nthreads 4
[2025-02-22 16:32:52] Threads: 4
[2025-02-22 16:32:52] Checking for CVMFS
[2025-02-22 16:32:52] No cvmfs_config command found, will try listing directly
[2025-02-22 16:32:52] CVMFS is ok
[2025-02-22 16:32:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 16:32:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 16:32:52] Further information can be found at the LHC@home message board.
[2025-02-22 16:32:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 16:32:52] Checking for apptainer binary...
[2025-02-22 16:32:52] which: no apptainer in ((null))
[2025-02-22 16:32:52] apptainer is not installed, using version from CVMFS
[2025-02-22 16:32:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 16:32:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2025-02-22 16:32:52] apptainer works
[2025-02-22 16:32:52] Set ATHENA_PROC_NUMBER=4
[2025-02-22 16:32:52] Set ATHENA_CORE_NUMBER=4
[2025-02-22 16:32:52] Starting ATLAS job with PandaID=6520902367
[2025-02-22 16:32:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 23:32:45]  *** The last 200 lines of the pilot log: ***
[2025-02-22 23:32:45] 2025-02-22 22:27:14,207 | INFO     | intersect: -12988475223.371473
[2025-02-22 23:32:45] 2025-02-22 22:27:14,208 | INFO     | chi2: 3.004128193784744
[2025-02-22 23:32:45] 2025-02-22 22:27:14,209 | INFO     | model: linear, x: [1740238407.0, 1740238468.0, 1740238529.0, 1740238590.0, 1740238651.0, 1740238712.0, 1740238773.0, 1740238834.0, 1740238895.0, 1740238956.0, 1740
[2025-02-22 23:32:45] 2025-02-22 22:27:14,209 | INFO     | sum of square deviations: 20144379560.5
[2025-02-22 23:32:45] 2025-02-22 22:27:14,214 | INFO     | sum of deviations: 153914537722.9999
[2025-02-22 23:32:45] 2025-02-22 22:27:14,215 | INFO     | mean x: 1740250637.5
[2025-02-22 23:32:45] 2025-02-22 22:27:14,215 | INFO     | mean y: 2358618.8656716417
[2025-02-22 23:32:45] 2025-02-22 22:27:14,215 | INFO     | -- intersect: -13294147813.041538
[2025-02-22 23:32:45] 2025-02-22 22:27:14,215 | INFO     | intersect: -13294147813.041538
[2025-02-22 23:32:45] 2025-02-22 22:27:14,216 | INFO     | chi2: 3.0043433869975904
[2025-02-22 23:32:45] 2025-02-22 22:27:14,216 | INFO     | current chi2=3.0043433869975904 (change=-0.00716325000017241 %)
[2025-02-22 23:32:45] 2025-02-22 22:27:14,216 | INFO     | right removable region: 401
[2025-02-22 23:32:45] 2025-02-22 22:27:14,217 | INFO     | model: linear, x: [1740238712.0, 1740238773.0, 1740238834.0, 1740238895.0, 1740238956.0, 1740239017.0, 1740239078.0, 1740239139.0, 1740239200.0, 1740239261.0, 1740
[2025-02-22 23:32:45] 2025-02-22 22:27:14,218 | INFO     | sum of square deviations: 20144379560.5
[2025-02-22 23:32:45] 2025-02-22 22:27:14,225 | INFO     | sum of deviations: 69658845049.49998
[2025-02-22 23:32:45] 2025-02-22 22:27:14,225 | INFO     | mean x: 1740250942.5
[2025-02-22 23:32:45] 2025-02-22 22:27:14,225 | INFO     | mean y: 2376324.435323383
[2025-02-22 23:32:45] 2025-02-22 22:27:14,225 | INFO     | -- intersect: -6015375197.113397
[2025-02-22 23:32:45] 2025-02-22 22:27:14,226 | INFO     | intersect: -6015375197.113397
[2025-02-22 23:32:45] 2025-02-22 22:27:14,227 | INFO     | chi2: 0.9896136544166189
[2025-02-22 23:32:45] 2025-02-22 22:27:14,227 | INFO     | current chi2=0.9896136544166189 (change=67.05820821947493 %)
[2025-02-22 23:32:45] 2025-02-22 22:27:14,227 | INFO     | model: linear, x: [1740239017.0, 1740239078.0, 1740239139.0, 1740239200.0, 1740239261.0, 1740239322.0, 1740239383.0, 1740239444.0, 1740239505.0, 1740239566.0, 1740
[2025-02-22 23:32:45] 2025-02-22 22:27:14,228 | INFO     | sum of square deviations: 19402030758.0
[2025-02-22 23:32:45] 2025-02-22 22:27:14,234 | INFO     | sum of deviations: 7896812278.999999
[2025-02-22 23:32:45] 2025-02-22 22:27:14,235 | INFO     | mean x: 1740251095.0
[2025-02-22 23:32:45] 2025-02-22 22:27:14,235 | INFO     | mean y: 2389011.911838791
[2025-02-22 23:32:45] 2025-02-22 22:27:14,235 | INFO     | -- intersect: -705909845.406115
[2025-02-22 23:32:45] 2025-02-22 22:27:14,235 | INFO     | intersect: -705909845.406115
[2025-02-22 23:32:45] 2025-02-22 22:27:14,236 | INFO     | chi2: 0.08736322967316751
[2025-02-22 23:32:45] 2025-02-22 22:27:14,236 | INFO     | current chi2=0.08736322967316751 (change=91.17198623086213 %)
[2025-02-22 23:32:45] 2025-02-22 22:27:14,237 | INFO     | model: linear, x: [1740239322.0, 1740239383.0, 1740239444.0, 1740239505.0, 1740239566.0, 1740239627.0, 1740239688.0, 1740239749.0, 1740239810.0, 1740239871.0, 1740
[2025-02-22 23:32:45] 2025-02-22 22:27:14,237 | INFO     | sum of square deviations: 18678147418.0
[2025-02-22 23:32:45] 2025-02-22 22:27:14,244 | INFO     | sum of deviations: -3128610029.0
[2025-02-22 23:32:45] 2025-02-22 22:27:14,244 | INFO     | mean x: 1740251247.5
[2025-02-22 23:32:45] 2025-02-22 22:27:14,244 | INFO     | mean y: 2391321.0
[2025-02-22 23:32:45] 2025-02-22 22:27:14,244 | INFO     | -- intersect: 293885299.7155427
[2025-02-22 23:32:45] 2025-02-22 22:27:14,245 | INFO     | intersect: 293885299.7155427
[2025-02-22 23:32:45] 2025-02-22 22:27:14,245 | INFO     | chi2: 0.03342530578273781
[2025-02-22 23:32:45] 2025-02-22 22:27:14,246 | INFO     | current chi2=0.03342530578273781 (change=61.73984649172836 %)
[2025-02-22 23:32:45] 2025-02-22 22:27:14,246 | INFO     | model: linear, x: [1740239627.0, 1740239688.0, 1740239749.0, 1740239810.0, 1740239871.0, 1740239932.0, 1740239993.0, 1740240054.0, 1740240115.0, 1740240176.0, 1740
[2025-02-22 23:32:45] 2025-02-22 22:27:14,247 | INFO     | sum of square deviations: 17972496978.0
[2025-02-22 23:32:45] 2025-02-22 22:27:14,252 | INFO     | sum of deviations: 813452262.9999925
[2025-02-22 23:32:45] 2025-02-22 22:27:14,252 | INFO     | mean x: 1740251400.0
[2025-02-22 23:32:45] 2025-02-22 22:27:14,252 | INFO     | mean y: 2390464.4444444445
[2025-02-22 23:32:45] 2025-02-22 22:27:14,252 | INFO     | -- intersect: -76374964.82516369
[2025-02-22 23:32:45] 2025-02-22 22:27:14,253 | INFO     | intersect: -76374964.82516369
[2025-02-22 23:32:45] 2025-02-22 22:27:14,254 | INFO     | chi2: 0.026586214220339653
[2025-02-22 23:32:45] 2025-02-22 22:27:14,254 | INFO     | current chi2=0.026586214220339653 (change=20.460819735956285 %)
[2025-02-22 23:32:45] 2025-02-22 22:27:14,254 | INFO     | left removable region: 40
[2025-02-22 23:32:45] 2025-02-22 22:27:14,255 | INFO     | model: linear, x: [1740240847.0, 1740240908.0, 1740240969.0, 1740241030.0, 1740241091.0, 1740241152.0, 1740241213.0, 1740241274.0, 1740241335.0, 1740241396.0, 1740
[2025-02-22 23:32:45] 2025-02-22 22:27:14,255 | INFO     | sum of square deviations: 14588031660.0
[2025-02-22 23:32:45] 2025-02-22 22:27:14,261 | INFO     | sum of deviations: 13300066131.000002
[2025-02-22 23:32:45] 2025-02-22 22:27:14,261 | INFO     | mean x: 1740251827.0
[2025-02-22 23:32:45] 2025-02-22 22:27:14,261 | INFO     | mean y: 2387390.7506925208
[2025-02-22 23:32:45] 2025-02-22 22:27:14,261 | INFO     | -- intersect: -1584219008.4633858
[2025-02-22 23:32:45] 2025-02-22 22:27:14,261 | INFO     | intersect: -1584219008.4633858
[2025-02-22 23:32:45] 2025-02-22 22:27:14,262 | INFO     | chi2: 0.012637918102333072
[2025-02-22 23:32:45] 2025-02-22 22:27:14,262 | INFO     | -- intersect: -1584219008.4633858
[2025-02-22 23:32:45] 2025-02-22 22:27:14,263 | INFO     | current memory leak: 0.91 B/s (using 361 data points, chi2=0.01)
[2025-02-22 23:32:45] 2025-02-22 22:27:14,264 | INFO     | ..............................
[2025-02-22 23:32:45] 2025-02-22 22:27:14,264 | INFO     | . Timing measurements:
[2025-02-22 23:32:45] 2025-02-22 22:27:14,264 | INFO     | . get job = 0 s
[2025-02-22 23:32:45] 2025-02-22 22:27:14,264 | INFO     | . initial setup = 1 s
[2025-02-22 23:32:45] 2025-02-22 22:27:14,264 | INFO     | . payload setup = 4 s
[2025-02-22 23:32:45] 2025-02-22 22:27:14,264 | INFO     | . stage-in = 0 s
[2025-02-22 23:32:45] 2025-02-22 22:27:14,265 | INFO     | . payload execution = 24817 s
[2025-02-22 23:32:45] 2025-02-22 22:27:14,265 | INFO     | . stage-out = 1 s
[2025-02-22 23:32:45] 2025-02-22 22:27:14,265 | INFO     | . log creation = 0 s
[2025-02-22 23:32:45] 2025-02-22 22:27:14,265 | INFO     | ..............................
[2025-02-22 23:32:45] 2025-02-22 22:27:14,660 | INFO     | 
[2025-02-22 23:32:45] 2025-02-22 22:27:14,660 | INFO     | job summary report
[2025-02-22 23:32:45] 2025-02-22 22:27:14,660 | INFO     | --------------------------------------------------
[2025-02-22 23:32:45] 2025-02-22 22:27:14,660 | INFO     | PanDA job id: 6520902367
[2025-02-22 23:32:45] 2025-02-22 22:27:14,660 | INFO     | task id: 43078919
[2025-02-22 23:32:45] 2025-02-22 22:27:14,660 | INFO     | errors: (none)
[2025-02-22 23:32:45] 2025-02-22 22:27:14,660 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 23:32:45] 2025-02-22 22:27:14,660 | INFO     | pilot state: finished 
[2025-02-22 23:32:45] 2025-02-22 22:27:14,660 | INFO     | transexitcode: 0
[2025-02-22 23:32:45] 2025-02-22 22:27:14,661 | INFO     | exeerrorcode: 0
[2025-02-22 23:32:45] 2025-02-22 22:27:14,661 | INFO     | exeerrordiag: 
[2025-02-22 23:32:45] 2025-02-22 22:27:14,661 | INFO     | exitcode: 0
[2025-02-22 23:32:45] 2025-02-22 22:27:14,661 | INFO     | exitmsg: OK
[2025-02-22 23:32:45] 2025-02-22 22:27:14,661 | INFO     | cpuconsumptiontime: 94955 s
[2025-02-22 23:32:45] 2025-02-22 22:27:14,661 | INFO     | nevents: 400
[2025-02-22 23:32:45] 2025-02-22 22:27:14,661 | INFO     | neventsw: 0
[2025-02-22 23:32:45] 2025-02-22 22:27:14,661 | INFO     | pid: 4059399
[2025-02-22 23:32:45] 2025-02-22 22:27:14,661 | INFO     | pgrp: 4059399
[2025-02-22 23:32:45] 2025-02-22 22:27:14,661 | INFO     | corecount: 4
[2025-02-22 23:32:45] 2025-02-22 22:27:14,661 | INFO     | event service: False
[2025-02-22 23:32:45] 2025-02-22 22:27:14,661 | INFO     | sizes: {0: 2383196, 1: 2383395, 5: 2383601, 12: 2383657, 24825: 2418766, 24826: 2418765, 24828: 2427912, 24829: 2427968, 24837: 2428138}
[2025-02-22 23:32:45] 2025-02-22 22:27:14,662 | INFO     | --------------------------------------------------
[2025-02-22 23:32:45] 2025-02-22 22:27:14,662 | INFO     | 
[2025-02-22 23:32:45] 2025-02-22 22:27:14,662 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-02-22 23:32:45] 2025-02-22 22:27:14,682 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 23:32:45] 2025-02-22 22:27:14,682 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 23:32:45] 2025-02-22 22:27:14,683 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 23:32:45] 2025-02-22 22:27:14,683 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 23:32:45] 2025-02-22 22:27:14,683 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 23:32:45] 2025-02-22 22:27:14,683 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 23:32:45] 2025-02-22 22:27:14,683 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 23:32:45] 2025-02-22 22:27:14,683 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 23:32:45] 2025-02-22 22:27:14,683 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 23:32:45] 2025-02-22 22:27:14,684 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 23:32:45] 2025-02-22 22:27:14,684 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 23:32:45] 2025-02-22 22:27:14,684 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 23:32:45] 2025-02-22 22:27:14,684 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 23:32:45] 2025-02-22 22:27:14,684 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 23:32:45] 2025-02-22 22:27:14,684 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 23:32:45] 2025-02-22 22:27:14,684 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 23:32:45] 2025-02-22 22:27:14,684 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 23:32:45] 2025-02-22 22:27:14,684 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 23:32:45] 2025-02-22 22:27:14,684 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 23:32:45] 2025-02-22 22:27:14,684 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 23:32:45] 2025-02-22 22:27:14,685 | INFO     | job 6520902367 has completed (purged errors)
[2025-02-22 23:32:45] 2025-02-22 22:27:14,685 | INFO     | overall cleanup function is called
[2025-02-22 23:32:45] 2025-02-22 22:27:15,693 | INFO     | --- collectZombieJob: --- 10, [4059399]
[2025-02-22 23:32:45] 2025-02-22 22:27:15,693 | INFO     | zombie collector waiting for pid 4059399
[2025-02-22 23:32:45] 2025-02-22 22:27:15,693 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 23:32:45] 2025-02-22 22:27:15,693 | INFO     | collected zombie processes
[2025-02-22 23:32:45] 2025-02-22 22:27:15,693 | INFO     | will attempt to kill all subprocesses of pid=4059399
[2025-02-22 23:32:45] 2025-02-22 22:27:15,855 | INFO     | process IDs to be killed: [4059399] (in reverse order)
[2025-02-22 23:32:45] 2025-02-22 22:27:15,967 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 23:32:45] 2025-02-22 22:27:15,967 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 23:32:45] 2025-02-22 22:27:15,979 | INFO     | did not find any defunct processes belonging to 4059399
[2025-02-22 23:32:45] 2025-02-22 22:27:15,991 | INFO     | did not find any defunct processes belonging to 4059399
[2025-02-22 23:32:45] 2025-02-22 22:27:15,991 | INFO     | ready for new job
[2025-02-22 23:32:45] 2025-02-22 22:27:15,991 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 23:32:45] 2025-02-22 22:27:15,994 | INFO     | **************************************
[2025-02-22 23:32:45] 2025-02-22 22:27:15,995 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 23:32:45] 2025-02-22 22:27:15,995 | INFO     | **************************************
[2025-02-22 23:32:45] 2025-02-22 22:27:15,995 | INFO     | 
[2025-02-22 23:32:45] 2025-02-22 22:27:15,999 | INFO     | architecture information:
[2025-02-22 23:32:45] 2025-02-22 22:27:15,999 | INFO     | executing command: cat /etc/os-release
[2025-02-22 23:32:45] 2025-02-22 22:27:16,015 | INFO     | cat /etc/os-release:
[2025-02-22 23:32:45] NAME="CentOS Linux"
[2025-02-22 23:32:45] VERSION="7 (Core)"
[2025-02-22 23:32:45] ID="centos"
[2025-02-22 23:32:45] ID_LIKE="rhel fedora"
[2025-02-22 23:32:45] VERSION_ID="7"
[2025-02-22 23:32:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 23:32:45] ANSI_COLOR="0;31"
[2025-02-22 23:32:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 23:32:45] HOME_URL="https://www.centos.org/"
[2025-02-22 23:32:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 23:32:45] 
[2025-02-22 23:32:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 23:32:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 23:32:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 23:32:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 23:32:45] 
[2025-02-22 23:32:45] 2025-02-22 22:27:16,015 | INFO     | **************************************
[2025-02-22 23:32:45] 2025-02-22 22:27:16,518 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-02-22 23:32:45] 2025-02-22 22:27:16,535 | INFO     | sufficient remaining disk space (638307008512 B)
[2025-02-22 23:32:45] 2025-02-22 22:27:16,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 23:32:45] 2025-02-22 22:27:16,536 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 23:32:45] 2025-02-22 22:27:16,536 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-22 23:32:45] 2025-02-22 22:27:16,537 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 23:32:45] 2025-02-22 22:27:16,537 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 23:32:45] 2025-02-22 22:27:16,537 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 23:32:45] 2025-02-22 22:27:16,537 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 23:32:45] 2025-02-22 22:27:16,865 | INFO     | all data control threads have been joined
[2025-02-22 23:32:45] 2025-02-22 22:27:17,046 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 23:32:45] 2025-02-22 22:27:17,046 | INFO     | aborting loop
[2025-02-22 23:32:45] 2025-02-22 22:27:17,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 23:32:45] 2025-02-22 22:27:17,540 | INFO     | [job] retrieve thread has finished
[2025-02-22 23:32:45] 2025-02-22 22:27:17,567 | INFO     | all payload control threads have been joined
[2025-02-22 23:32:45] 2025-02-22 22:27:17,681 | INFO     | all job control threads have been joined
[2025-02-22 23:32:45] 2025-02-22 22:27:17,870 | INFO     | [data] control thread has finished
[2025-02-22 23:32:45] 2025-02-22 22:27:17,932 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 23:32:45] 2025-02-22 22:27:18,051 | INFO     | [job] job monitor thread has finished
[2025-02-22 23:32:45] 2025-02-22 22:27:18,092 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 23:32:45] 2025-02-22 22:27:18,117 | INFO     | [job] validate thread has finished
[2025-02-22 23:32:45] 2025-02-22 22:27:18,247 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 23:32:45] 2025-02-22 22:27:18,334 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 23:32:45] 2025-02-22 22:27:18,515 | INFO     | [payload] failed_post thread has finished
[2025-02-22 23:32:45] 2025-02-22 22:27:18,542 | INFO     | [data] copytool_out thread has finished
[2025-02-22 23:32:45] 2025-02-22 22:27:18,572 | INFO     | [payload] control thread has finished
[2025-02-22 23:32:45] 2025-02-22 22:27:18,686 | INFO     | [job] control thread has finished
[2025-02-22 23:32:45] 2025-02-22 22:27:18,740 | INFO     | [data] copytool_in thread has finished
[2025-02-22 23:32:45] 2025-02-22 22:27:18,987 | INFO     | [payload] validate_post thread has finished
[2025-02-22 23:32:45] 2025-02-22 22:27:19,389 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 23:32:45] 2025-02-22 22:27:20,394 | INFO     | [job] queue monitor thread has finished
[2025-02-22 23:32:45] 2025-02-22 22:27:21,161 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 23:32:45] 2025-02-22 22:27:21,387 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23124731733824)>', '<ExcThread(monitor, started 23124418451200)>']
[2025-02-22 23:32:45] 2025-02-22 22:27:21,563 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 23:32:45] 2025-02-22 22:27:21,563 | INFO     | [monitor] control thread has ended
[2025-02-22 23:32:45] 2025-02-22 22:27:26,413 | INFO     | all workflow threads have been joined
[2025-02-22 23:32:45] 2025-02-22 22:27:26,413 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 23:32:45] 2025-02-22 22:27:26,413 | INFO     | traces error code: 0
[2025-02-22 23:32:45] 2025-02-22 22:27:26,414 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 23:32:45] 2025-02-22 22:27:26,628 [wrapper] ==== pilot stdout END ====
[2025-02-22 23:32:45] 2025-02-22 22:27:26,630 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 23:32:45] 2025-02-22 22:27:26,633 [wrapper] pilotpid: 4051809
[2025-02-22 23:32:45] 2025-02-22 22:27:26,636 [wrapper] Pilot exit status: 0
[2025-02-22 23:32:45] 2025-02-22 22:27:26,647 [wrapper] pandaids: 6520902367
[2025-02-22 23:32:45] 2025-02-22 22:27:26,728 [wrapper] cleanup supervisor_pilot  789308 4051810
[2025-02-22 23:32:45] 2025-02-22 22:27:26,731 [wrapper] Test setup, not cleaning
[2025-02-22 23:32:45] 2025-02-22 22:27:26,736 [wrapper] apfmon messages muted
[2025-02-22 23:32:45] 2025-02-22 22:27:26,739 [wrapper] ==== wrapper stdout END ====
[2025-02-22 23:32:45] 2025-02-22 22:27:26,741 [wrapper] ==== wrapper stderr END ====
[2025-02-22 23:32:45]  *** Error codes and diagnostics ***
[2025-02-22 23:32:45]     "exeErrorCode": 0,
[2025-02-22 23:32:45]     "exeErrorDiag": "",
[2025-02-22 23:32:45]     "pilotErrorCode": 0,
[2025-02-22 23:32:45]     "pilotErrorDiag": "",
[2025-02-22 23:32:45]  *** Listing of results directory ***
[2025-02-22 23:32:45] total 662256
[2025-02-22 23:32:45] -rwx------ 1 boinc boinc     35865 Feb 20 15:18 runpilot2-wrapper.sh
[2025-02-22 23:32:45] -rw-r--r-- 1 boinc boinc      5118 Feb 20 15:18 queuedata.json
[2025-02-22 23:32:45] -rw-r--r-- 1 boinc boinc    491065 Feb 20 15:18 pilot3.tar.gz
[2025-02-22 23:32:45] -rw-r--r-- 1 boinc boinc       100 Feb 22 16:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 23:32:45] -rwxr-xr-x 1 boinc boinc      7986 Feb 22 16:32 run_atlas
[2025-02-22 23:32:45] -rw-r--r-- 1 boinc boinc       105 Feb 22 16:32 job.xml
[2025-02-22 23:32:45] -rw-r--r-- 1 boinc boinc      6634 Feb 22 16:32 init_data.xml
[2025-02-22 23:32:45] -rw-r--r-- 2 boinc boinc 341118427 Feb 22 16:32 EVNT.43078917._000202.pool.root.1
[2025-02-22 23:32:45] -rw-r--r-- 2 boinc boinc     17569 Feb 22 16:32 start_atlas.sh
[2025-02-22 23:32:45] drwxrwx--x 2 boinc boinc      4096 Feb 22 16:32 shared
[2025-02-22 23:32:45] -rw-r--r-- 2 boinc boinc    503555 Feb 22 16:32 input.tar.gz
[2025-02-22 23:32:45] -rw-r--r-- 1 boinc boinc         0 Feb 22 16:32 boinc_lockfile
[2025-02-22 23:32:45] -rw-r--r-- 1 boinc boinc      2544 Feb 22 16:32 pandaJob.out
[2025-02-22 23:32:45] -rw------- 1 boinc boinc       424 Feb 22 16:32 setup.sh.local
[2025-02-22 23:32:45] -rw------- 1 boinc boinc    987736 Feb 22 16:33 agis_schedconf.cvmfs.json
[2025-02-22 23:32:45] drwx------ 4 boinc boinc      4096 Feb 22 16:33 pilot3
[2025-02-22 23:32:45] -rw------- 1 boinc boinc 326680855 Feb 22 23:26 HITS.43078919._077911.pool.root.1
[2025-02-22 23:32:45] -rw-r--r-- 1 boinc boinc       532 Feb 22 23:26 boinc_task_state.xml
[2025-02-22 23:32:45] -rw------- 1 boinc boinc      1038 Feb 22 23:27 memory_monitor_summary.json
[2025-02-22 23:32:45] -rw------- 1 boinc boinc   1582569 Feb 22 23:27 agis_ddmendpoints.agis.ALL.json
[2025-02-22 23:32:45] -rw------- 1 boinc boinc    481890 Feb 22 23:27 log.43078919._077911.job.log.tgz.1
[2025-02-22 23:32:45] -rw------- 1 boinc boinc      7744 Feb 22 23:27 heartbeat.json
[2025-02-22 23:32:45] -rw------- 1 boinc boinc        95 Feb 22 23:27 pilot_heartbeat.json
[2025-02-22 23:32:45] -rw------- 1 boinc boinc      4348 Feb 22 23:27 pilotlog.txt
[2025-02-22 23:32:45] -rw------- 1 boinc boinc   2790816 Feb 22 23:27 log.43078919._077911.job.log.1
[2025-02-22 23:32:45] -rw------- 1 boinc boinc       357 Feb 22 23:27 output.list
[2025-02-22 23:32:45] -rw-r--r-- 1 boinc boinc       620 Feb 22 23:27 runtime_log
[2025-02-22 23:32:45] -rw------- 1 boinc boinc   3287040 Feb 22 23:27 result.tar.gz
[2025-02-22 23:32:45] -rw-r--r-- 1 boinc boinc     11424 Feb 22 23:27 runtime_log.err
[2025-02-22 23:32:45] -rw------- 1 boinc boinc       665 Feb 22 23:27 TBLKDmDZM56n9Rq4apOajLDm4fhM0noT9bVoFjIUDm9xbKDmsHFZen.diag
[2025-02-22 23:32:45] -rw-r--r-- 1 boinc boinc        28 Feb 22 23:32 wrapper_checkpoint.txt
[2025-02-22 23:32:45] -rw-r--r-- 1 boinc boinc      8192 Feb 22 23:32 boinc_mmap_file
[2025-02-22 23:32:45] -rw-r--r-- 1 boinc boinc     21370 Feb 22 23:32 stderr.txt
[2025-02-22 23:32:45] HITS file was successfully produced:
[2025-02-22 23:32:45] -rw------- 1 boinc boinc 326680855 Feb 22 23:26 shared/HITS.pool.root.1
[2025-02-22 23:32:45]  *** Contents of shared directory: ***
[2025-02-22 23:32:45] total 655884
[2025-02-22 23:32:45] -rw-r--r-- 2 boinc boinc 341118427 Feb 22 16:32 ATLAS.root_0
[2025-02-22 23:32:45] -rw-r--r-- 2 boinc boinc     17569 Feb 22 16:32 start_atlas.sh
[2025-02-22 23:32:45] -rw-r--r-- 2 boinc boinc    503555 Feb 22 16:32 input.tar.gz
[2025-02-22 23:32:45] -rw------- 1 boinc boinc 326680855 Feb 22 23:26 HITS.pool.root.1
[2025-02-22 23:32:45] -rw------- 1 boinc boinc   3287040 Feb 22 23:27 result.tar.gz
23:32:47 (4046497): run_atlas exited; CPU time 95045.812225
23:32:47 (4046497): called boinc_finish(0)

</stderr_txt>
]]>

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