Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:20:10 (3918610): wrapper (7.7.26015): starting
01:20:10 (3918610): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 01:20:10] Arguments: --nthreads 4
[2025-02-22 01:20:10] Threads: 4
[2025-02-22 01:20:10] Checking for CVMFS
[2025-02-22 01:20:10] No cvmfs_config command found, will try listing directly
[2025-02-22 01:20:10] CVMFS is ok
[2025-02-22 01:20:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 01:20:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 01:20:10] Further information can be found at the LHC@home message board.
[2025-02-22 01:20:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 01:20:10] Checking for apptainer binary...
[2025-02-22 01:20:10] which: no apptainer in ((null))
[2025-02-22 01:20:10] apptainer is not installed, using version from CVMFS
[2025-02-22 01:20:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 01:20:11] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-02-22 01:20:11] apptainer works
[2025-02-22 01:20:11] Set ATHENA_PROC_NUMBER=4
[2025-02-22 01:20:11] Set ATHENA_CORE_NUMBER=4
[2025-02-22 01:20:11] Starting ATLAS job with PandaID=6520837940
[2025-02-22 01:20:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
06:33:11 (807822): wrapper (7.7.26015): starting
06:33:11 (807822): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 06:33:11] Arguments: --nthreads 4
[2025-02-22 06:33:11] Threads: 4
[2025-02-22 06:33:11] This job has been restarted, cleaning up previous attempt
[2025-02-22 06:33:11] Checking for CVMFS
[2025-02-22 06:33:11] No cvmfs_config command found, will try listing directly
[2025-02-22 06:33:11] CVMFS is ok
[2025-02-22 06:33:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 06:33:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 06:33:11] Further information can be found at the LHC@home message board.
[2025-02-22 06:33:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 06:33:11] Checking for apptainer binary...
[2025-02-22 06:33:11] which: no apptainer in ((null))
[2025-02-22 06:33:11] apptainer is not installed, using version from CVMFS
[2025-02-22 06:33:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 06:33:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-02-22 06:33:12] apptainer works
[2025-02-22 06:33:12] Set ATHENA_PROC_NUMBER=4
[2025-02-22 06:33:12] Set ATHENA_CORE_NUMBER=4
[2025-02-22 06:33:12] Starting ATLAS job with PandaID=6520837940
[2025-02-22 06:33:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 12:18:06]  *** The last 200 lines of the pilot log: ***
[2025-02-22 12:18:06] 2025-02-22 11:17:46,472 | INFO     | intersect: -19561269695.592716
[2025-02-22 12:18:06] 2025-02-22 11:17:46,473 | INFO     | chi2: 3.7113051496013845
[2025-02-22 12:18:06] 2025-02-22 11:17:46,473 | INFO     | model: linear, x: [1740202438.0, 1740202499.0, 1740202560.0, 1740202621.0, 1740202682.0, 1740202743.0, 1740202804.0, 1740202865.0, 1740202926.0, 1740202987.0, 1740
[2025-02-22 12:18:06] 2025-02-22 11:17:46,475 | INFO     | sum of square deviations: 11450045382.0
[2025-02-22 12:18:06] 2025-02-22 11:17:46,478 | INFO     | sum of deviations: 132416552455.00003
[2025-02-22 12:18:06] 2025-02-22 11:17:46,478 | INFO     | mean x: 1740212564.0
[2025-02-22 12:18:06] 2025-02-22 11:17:46,478 | INFO     | mean y: 2334651.4234234234
[2025-02-22 12:18:06] 2025-02-22 11:17:46,479 | INFO     | -- intersect: -20122733902.977882
[2025-02-22 12:18:06] 2025-02-22 11:17:46,479 | INFO     | intersect: -20122733902.977882
[2025-02-22 12:18:06] 2025-02-22 11:17:46,479 | INFO     | chi2: 3.7123923816486215
[2025-02-22 12:18:06] 2025-02-22 11:17:46,479 | INFO     | current chi2=3.7123923816486215 (change=-0.029295140211087627 %)
[2025-02-22 12:18:06] 2025-02-22 11:17:46,479 | INFO     | right removable region: 332
[2025-02-22 12:18:06] 2025-02-22 11:17:46,480 | INFO     | model: linear, x: [1740202743.0, 1740202804.0, 1740202865.0, 1740202926.0, 1740202987.0, 1740203048.0, 1740203109.0, 1740203170.0, 1740203231.0, 1740203292.0, 1740
[2025-02-22 12:18:06] 2025-02-22 11:17:46,480 | INFO     | sum of square deviations: 11450045382.0
[2025-02-22 12:18:06] 2025-02-22 11:17:46,483 | INFO     | sum of deviations: 57033203366.99998
[2025-02-22 12:18:06] 2025-02-22 11:17:46,483 | INFO     | mean x: 1740212869.0
[2025-02-22 12:18:06] 2025-02-22 11:17:46,483 | INFO     | mean y: 2357840.282282282
[2025-02-22 12:18:06] 2025-02-22 11:17:46,483 | INFO     | -- intersect: -8665722603.798136
[2025-02-22 12:18:06] 2025-02-22 11:17:46,483 | INFO     | intersect: -8665722603.798136
[2025-02-22 12:18:06] 2025-02-22 11:17:46,483 | INFO     | chi2: 1.361332083068705
[2025-02-22 12:18:06] 2025-02-22 11:17:46,483 | INFO     | current chi2=1.361332083068705 (change=63.31931683885061 %)
[2025-02-22 12:18:06] 2025-02-22 11:17:46,484 | INFO     | model: linear, x: [1740203048.0, 1740203109.0, 1740203170.0, 1740203231.0, 1740203292.0, 1740203353.0, 1740203414.0, 1740203475.0, 1740203536.0, 1740203597.0, 1740
[2025-02-22 12:18:06] 2025-02-22 11:17:46,484 | INFO     | sum of square deviations: 10941980042.0
[2025-02-22 12:18:06] 2025-02-22 11:17:46,487 | INFO     | sum of deviations: -2575239317.9999986
[2025-02-22 12:18:06] 2025-02-22 11:17:46,487 | INFO     | mean x: 1740213021.5
[2025-02-22 12:18:06] 2025-02-22 11:17:46,487 | INFO     | mean y: 2375732.4939024393
[2025-02-22 12:18:06] 2025-02-22 11:17:46,487 | INFO     | -- intersect: 411941914.9819528
[2025-02-22 12:18:06] 2025-02-22 11:17:46,487 | INFO     | intersect: 411941914.9819528
[2025-02-22 12:18:06] 2025-02-22 11:17:46,488 | INFO     | chi2: 0.0971961649517457
[2025-02-22 12:18:06] 2025-02-22 11:17:46,488 | INFO     | current chi2=0.0971961649517457 (change=92.86021638947591 %)
[2025-02-22 12:18:06] 2025-02-22 11:17:46,488 | INFO     | model: linear, x: [1740203353.0, 1740203414.0, 1740203475.0, 1740203536.0, 1740203597.0, 1740203658.0, 1740203719.0, 1740203780.0, 1740203841.0, 1740203902.0, 1740
[2025-02-22 12:18:06] 2025-02-22 11:17:46,488 | INFO     | sum of square deviations: 10449170802.0
[2025-02-22 12:18:06] 2025-02-22 11:17:46,491 | INFO     | sum of deviations: -11713788459.000008
[2025-02-22 12:18:06] 2025-02-22 11:17:46,491 | INFO     | mean x: 1740213174.0
[2025-02-22 12:18:06] 2025-02-22 11:17:46,491 | INFO     | mean y: 2378540.2383900927
[2025-02-22 12:18:06] 2025-02-22 11:17:46,491 | INFO     | -- intersect: 1953202139.5520627
[2025-02-22 12:18:06] 2025-02-22 11:17:46,491 | INFO     | intersect: 1953202139.5520627
[2025-02-22 12:18:06] 2025-02-22 11:17:46,492 | INFO     | chi2: 0.038619757489586765
[2025-02-22 12:18:06] 2025-02-22 11:17:46,492 | INFO     | current chi2=0.038619757489586765 (change=60.266171500943436 %)
[2025-02-22 12:18:06] 2025-02-22 11:17:46,492 | INFO     | model: linear, x: [1740203658.0, 1740203719.0, 1740203780.0, 1740203841.0, 1740203902.0, 1740203963.0, 1740204024.0, 1740204085.0, 1740204146.0, 1740204207.0, 1740
[2025-02-22 12:18:06] 2025-02-22 11:17:46,494 | INFO     | sum of square deviations: 9971385099.5
[2025-02-22 12:18:06] 2025-02-22 11:17:46,497 | INFO     | sum of deviations: -7450866746.500006
[2025-02-22 12:18:06] 2025-02-22 11:17:46,497 | INFO     | mean x: 1740213326.5
[2025-02-22 12:18:06] 2025-02-22 11:17:46,497 | INFO     | mean y: 2377178.349056604
[2025-02-22 12:18:06] 2025-02-22 11:17:46,497 | INFO     | -- intersect: 1302707822.1715655
[2025-02-22 12:18:06] 2025-02-22 11:17:46,497 | INFO     | intersect: 1302707822.1715655
[2025-02-22 12:18:06] 2025-02-22 11:17:46,497 | INFO     | chi2: 0.03331491951481876
[2025-02-22 12:18:06] 2025-02-22 11:17:46,498 | INFO     | current chi2=0.03331491951481876 (change=13.736072724429643 %)
[2025-02-22 12:18:06] 2025-02-22 11:17:46,498 | INFO     | left removable region: 40
[2025-02-22 12:18:06] 2025-02-22 11:17:46,498 | INFO     | model: linear, x: [1740204878.0, 1740204939.0, 1740205000.0, 1740205061.0, 1740205122.0, 1740205183.0, 1740205244.0, 1740205305.0, 1740205366.0, 1740205427.0, 1740
[2025-02-22 12:18:06] 2025-02-22 11:17:46,498 | INFO     | sum of square deviations: 7720081493.0
[2025-02-22 12:18:06] 2025-02-22 11:17:46,500 | INFO     | sum of deviations: 9519295555.5
[2025-02-22 12:18:06] 2025-02-22 11:17:46,500 | INFO     | mean x: 1740213753.5
[2025-02-22 12:18:06] 2025-02-22 11:17:46,500 | INFO     | mean y: 2371079.640410959
[2025-02-22 12:18:06] 2025-02-22 11:17:46,501 | INFO     | -- intersect: -2143410550.2987282
[2025-02-22 12:18:06] 2025-02-22 11:17:46,501 | INFO     | intersect: -2143410550.2987282
[2025-02-22 12:18:06] 2025-02-22 11:17:46,501 | INFO     | chi2: 0.0006170069953010567
[2025-02-22 12:18:06] 2025-02-22 11:17:46,501 | INFO     | -- intersect: -2143410550.2987282
[2025-02-22 12:18:06] 2025-02-22 11:17:46,501 | INFO     | current memory leak: 1.23 B/s (using 292 data points, chi2=0.00)
[2025-02-22 12:18:06] 2025-02-22 11:17:46,502 | INFO     | ..............................
[2025-02-22 12:18:06] 2025-02-22 11:17:46,502 | INFO     | . Timing measurements:
[2025-02-22 12:18:06] 2025-02-22 11:17:46,502 | INFO     | . get job = 0 s
[2025-02-22 12:18:06] 2025-02-22 11:17:46,502 | INFO     | . initial setup = 1 s
[2025-02-22 12:18:06] 2025-02-22 11:17:46,502 | INFO     | . payload setup = 8 s
[2025-02-22 12:18:06] 2025-02-22 11:17:46,503 | INFO     | . stage-in = 0 s
[2025-02-22 12:18:06] 2025-02-22 11:17:46,503 | INFO     | . payload execution = 20620 s
[2025-02-22 12:18:06] 2025-02-22 11:17:46,503 | INFO     | . stage-out = 1 s
[2025-02-22 12:18:06] 2025-02-22 11:17:46,503 | INFO     | . log creation = 0 s
[2025-02-22 12:18:06] 2025-02-22 11:17:46,503 | INFO     | ..............................
[2025-02-22 12:18:06] 2025-02-22 11:17:46,601 | INFO     | 
[2025-02-22 12:18:06] 2025-02-22 11:17:46,601 | INFO     | job summary report
[2025-02-22 12:18:06] 2025-02-22 11:17:46,601 | INFO     | --------------------------------------------------
[2025-02-22 12:18:06] 2025-02-22 11:17:46,601 | INFO     | PanDA job id: 6520837940
[2025-02-22 12:18:06] 2025-02-22 11:17:46,602 | INFO     | task id: 43205094
[2025-02-22 12:18:06] 2025-02-22 11:17:46,602 | INFO     | errors: (none)
[2025-02-22 12:18:06] 2025-02-22 11:17:46,602 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 12:18:06] 2025-02-22 11:17:46,602 | INFO     | pilot state: finished 
[2025-02-22 12:18:06] 2025-02-22 11:17:46,602 | INFO     | transexitcode: 0
[2025-02-22 12:18:06] 2025-02-22 11:17:46,602 | INFO     | exeerrorcode: 0
[2025-02-22 12:18:06] 2025-02-22 11:17:46,602 | INFO     | exeerrordiag: 
[2025-02-22 12:18:06] 2025-02-22 11:17:46,602 | INFO     | exitcode: 0
[2025-02-22 12:18:06] 2025-02-22 11:17:46,602 | INFO     | exitmsg: OK
[2025-02-22 12:18:06] 2025-02-22 11:17:46,602 | INFO     | cpuconsumptiontime: 78399 s
[2025-02-22 12:18:06] 2025-02-22 11:17:46,602 | INFO     | nevents: 400
[2025-02-22 12:18:06] 2025-02-22 11:17:46,602 | INFO     | neventsw: 0
[2025-02-22 12:18:06] 2025-02-22 11:17:46,603 | INFO     | pid: 819214
[2025-02-22 12:18:06] 2025-02-22 11:17:46,603 | INFO     | pgrp: 819214
[2025-02-22 12:18:06] 2025-02-22 11:17:46,603 | INFO     | corecount: 4
[2025-02-22 12:18:06] 2025-02-22 11:17:46,603 | INFO     | event service: False
[2025-02-22 12:18:06] 2025-02-22 11:17:46,603 | INFO     | sizes: {0: 2382531, 1: 2383398, 8: 2383604, 12: 2383632, 20633: 2416615, 20634: 2425578, 20636: 2425762, 20644: 2425932}
[2025-02-22 12:18:06] 2025-02-22 11:17:46,603 | INFO     | --------------------------------------------------
[2025-02-22 12:18:06] 2025-02-22 11:17:46,603 | INFO     | 
[2025-02-22 12:18:06] 2025-02-22 11:17:46,603 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-02-22 12:18:06] 2025-02-22 11:17:46,630 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 12:18:06] 2025-02-22 11:17:46,631 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 12:18:06] 2025-02-22 11:17:46,631 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 12:18:06] 2025-02-22 11:17:46,631 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 12:18:06] 2025-02-22 11:17:46,631 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 12:18:06] 2025-02-22 11:17:46,631 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 12:18:06] 2025-02-22 11:17:46,631 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 12:18:06] 2025-02-22 11:17:46,631 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 12:18:06] 2025-02-22 11:17:46,632 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 12:18:06] 2025-02-22 11:17:46,632 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 12:18:06] 2025-02-22 11:17:46,632 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 12:18:06] 2025-02-22 11:17:46,632 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 12:18:06] 2025-02-22 11:17:46,632 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 12:18:06] 2025-02-22 11:17:46,632 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 12:18:06] 2025-02-22 11:17:46,632 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 12:18:06] 2025-02-22 11:17:46,632 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 12:18:06] 2025-02-22 11:17:46,632 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 12:18:06] 2025-02-22 11:17:46,632 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 12:18:06] 2025-02-22 11:17:46,632 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 12:18:06] 2025-02-22 11:17:46,633 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 12:18:06] 2025-02-22 11:17:46,633 | INFO     | job 6520837940 has completed (purged errors)
[2025-02-22 12:18:06] 2025-02-22 11:17:46,633 | INFO     | overall cleanup function is called
[2025-02-22 12:18:06] 2025-02-22 11:17:47,642 | INFO     | --- collectZombieJob: --- 10, [819214]
[2025-02-22 12:18:06] 2025-02-22 11:17:47,643 | INFO     | zombie collector waiting for pid 819214
[2025-02-22 12:18:06] 2025-02-22 11:17:47,643 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 12:18:06] 2025-02-22 11:17:47,643 | INFO     | collected zombie processes
[2025-02-22 12:18:06] 2025-02-22 11:17:47,643 | INFO     | will attempt to kill all subprocesses of pid=819214
[2025-02-22 12:18:06] 2025-02-22 11:17:47,994 | INFO     | process IDs to be killed: [819214] (in reverse order)
[2025-02-22 12:18:06] 2025-02-22 11:17:48,253 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 12:18:06] 2025-02-22 11:17:48,253 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 12:18:06] 2025-02-22 11:17:48,277 | INFO     | did not find any defunct processes belonging to 819214
[2025-02-22 12:18:06] 2025-02-22 11:17:48,296 | INFO     | did not find any defunct processes belonging to 819214
[2025-02-22 12:18:06] 2025-02-22 11:17:48,296 | INFO     | ready for new job
[2025-02-22 12:18:06] 2025-02-22 11:17:48,296 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 12:18:06] 2025-02-22 11:17:48,300 | INFO     | **************************************
[2025-02-22 12:18:06] 2025-02-22 11:17:48,300 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 12:18:06] 2025-02-22 11:17:48,300 | INFO     | **************************************
[2025-02-22 12:18:06] 2025-02-22 11:17:48,300 | INFO     | 
[2025-02-22 12:18:06] 2025-02-22 11:17:48,308 | INFO     | architecture information:
[2025-02-22 12:18:06] 2025-02-22 11:17:48,309 | INFO     | executing command: cat /etc/os-release
[2025-02-22 12:18:06] 2025-02-22 11:17:48,329 | INFO     | cat /etc/os-release:
[2025-02-22 12:18:06] NAME="CentOS Linux"
[2025-02-22 12:18:06] VERSION="7 (Core)"
[2025-02-22 12:18:06] ID="centos"
[2025-02-22 12:18:06] ID_LIKE="rhel fedora"
[2025-02-22 12:18:06] VERSION_ID="7"
[2025-02-22 12:18:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 12:18:06] ANSI_COLOR="0;31"
[2025-02-22 12:18:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 12:18:06] HOME_URL="https://www.centos.org/"
[2025-02-22 12:18:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 12:18:06] 
[2025-02-22 12:18:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 12:18:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 12:18:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 12:18:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 12:18:06] 
[2025-02-22 12:18:06] 2025-02-22 11:17:48,329 | INFO     | **************************************
[2025-02-22 12:18:06] 2025-02-22 11:17:48,832 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-02-22 12:18:06] 2025-02-22 11:17:48,856 | INFO     | sufficient remaining disk space (3237834915840 B)
[2025-02-22 12:18:06] 2025-02-22 11:17:48,856 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 12:18:06] 2025-02-22 11:17:48,856 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 12:18:06] 2025-02-22 11:17:48,857 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 12:18:06] 2025-02-22 11:17:48,857 | INFO     | aborting loop
[2025-02-22 12:18:06] 2025-02-22 11:17:49,203 | INFO     | all data control threads have been joined
[2025-02-22 12:18:06] 2025-02-22 11:17:49,217 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 12:18:06] 2025-02-22 11:17:49,607 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 12:18:06] 2025-02-22 11:17:49,722 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 12:18:06] 2025-02-22 11:17:49,722 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 12:18:06] 2025-02-22 11:17:49,723 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 12:18:06] 2025-02-22 11:17:49,862 | INFO     | [job] retrieve thread has finished
[2025-02-22 12:18:06] 2025-02-22 11:17:49,862 | INFO     | [job] job monitor thread has finished
[2025-02-22 12:18:06] 2025-02-22 11:17:49,933 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 12:18:06] 2025-02-22 11:17:49,997 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 12:18:06] 2025-02-22 11:17:50,209 | INFO     | [data] control thread has finished
[2025-02-22 12:18:06] 2025-02-22 11:17:50,275 | INFO     | all payload control threads have been joined
[2025-02-22 12:18:06] 2025-02-22 11:17:50,460 | INFO     | [data] copytool_in thread has finished
[2025-02-22 12:18:06] 2025-02-22 11:17:50,519 | INFO     | all job control threads have been joined
[2025-02-22 12:18:06] 2025-02-22 11:17:50,701 | INFO     | [payload] validate_post thread has finished
[2025-02-22 12:18:06] 2025-02-22 11:17:51,126 | INFO     | [job] validate thread has finished
[2025-02-22 12:18:06] 2025-02-22 11:17:51,147 | INFO     | [payload] failed_post thread has finished
[2025-02-22 12:18:06] 2025-02-22 11:17:51,198 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 12:18:06] 2025-02-22 11:17:51,282 | INFO     | [payload] control thread has finished
[2025-02-22 12:18:06] 2025-02-22 11:17:51,526 | INFO     | [job] control thread has finished
[2025-02-22 12:18:06] 2025-02-22 11:17:51,611 | INFO     | [data] copytool_out thread has finished
[2025-02-22 12:18:06] 2025-02-22 11:17:51,611 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 12:18:06] 2025-02-22 11:17:52,617 | INFO     | [job] queue monitor thread has finished
[2025-02-22 12:18:06] 2025-02-22 11:17:53,223 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 12:18:06] 2025-02-22 11:17:59,046 | INFO     | job.realtimelogging is not enabled
[2025-02-22 12:18:06] 2025-02-22 11:18:00,052 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 12:18:06] 2025-02-22 11:18:01,451 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23360696579904)>', '<ExcThread(monitor, started 23360119490304)>']
[2025-02-22 12:18:06] 2025-02-22 11:18:01,784 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 12:18:06] 2025-02-22 11:18:01,785 | INFO     | [monitor] control thread has ended
[2025-02-22 12:18:06] 2025-02-22 11:18:06,477 | INFO     | all workflow threads have been joined
[2025-02-22 12:18:06] 2025-02-22 11:18:06,477 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 12:18:06] 2025-02-22 11:18:06,477 | INFO     | traces error code: 0
[2025-02-22 12:18:06] 2025-02-22 11:18:06,478 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 12:18:06] 2025-02-22 11:18:06,617 [wrapper] ==== pilot stdout END ====
[2025-02-22 12:18:06] 2025-02-22 11:18:06,621 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 12:18:06] 2025-02-22 11:18:06,625 [wrapper] pilotpid: 811803
[2025-02-22 12:18:06] 2025-02-22 11:18:06,630 [wrapper] Pilot exit status: 0
[2025-02-22 12:18:06] 2025-02-22 11:18:06,649 [wrapper] pandaids: 6520837940 6520837940
[2025-02-22 12:18:06] 2025-02-22 11:18:06,803 [wrapper] cleanup supervisor_pilot 2169655 811804
[2025-02-22 12:18:06] 2025-02-22 11:18:06,806 [wrapper] Test setup, not cleaning
[2025-02-22 12:18:06] 2025-02-22 11:18:06,814 [wrapper] apfmon messages muted
[2025-02-22 12:18:06] 2025-02-22 11:18:06,818 [wrapper] ==== wrapper stdout END ====
[2025-02-22 12:18:06] 2025-02-22 11:18:06,821 [wrapper] ==== wrapper stderr END ====
[2025-02-22 12:18:06]  *** Error codes and diagnostics ***
[2025-02-22 12:18:06]     "exeErrorCode": 0,
[2025-02-22 12:18:06]     "exeErrorDiag": "",
[2025-02-22 12:18:06]     "pilotErrorCode": 0,
[2025-02-22 12:18:06]     "pilotErrorDiag": "",
[2025-02-22 12:18:06]  *** Listing of results directory ***
[2025-02-22 12:18:06] total 982112
[2025-02-22 12:18:06] drwx------ 4 boinc boinc      4096 Dec 18 12:03 pilot3
[2025-02-22 12:18:06] -rw-r--r-- 1 boinc boinc    491065 Feb 20 14:47 pilot3.tar.gz
[2025-02-22 12:18:06] -rw-r--r-- 1 boinc boinc      5118 Feb 20 14:57 queuedata.json
[2025-02-22 12:18:06] -rwx------ 1 boinc boinc     35865 Feb 20 14:58 runpilot2-wrapper.sh
[2025-02-22 12:18:06] -rw-r--r-- 1 boinc boinc       100 Feb 22 01:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 12:18:06] -rwxr-xr-x 1 boinc boinc      7986 Feb 22 01:20 run_atlas
[2025-02-22 12:18:06] -rw-r--r-- 1 boinc boinc       105 Feb 22 01:20 job.xml
[2025-02-22 12:18:06] -rw-r--r-- 3 boinc boinc 341028278 Feb 22 01:20 EVNT.43092757._001865.pool.root.1
[2025-02-22 12:18:06] -rw-r--r-- 3 boinc boinc 341028278 Feb 22 01:20 ATLAS.root_0
[2025-02-22 12:18:06] drwxrwx--x 2 boinc boinc      4096 Feb 22 01:20 shared
[2025-02-22 12:18:06] -rw-r--r-- 2 boinc boinc    503561 Feb 22 01:20 input.tar.gz
[2025-02-22 12:18:06] -rw-r--r-- 2 boinc boinc     17569 Feb 22 01:20 start_atlas.sh
[2025-02-22 12:18:06] -rw-r--r-- 1 boinc boinc         0 Feb 22 01:20 boinc_lockfile
[2025-02-22 12:18:06] -rw-r--r-- 1 boinc boinc      2547 Feb 22 06:33 pandaJob.out
[2025-02-22 12:18:06] -rw------- 1 boinc boinc       424 Feb 22 06:33 setup.sh.local
[2025-02-22 12:18:06] -rw------- 1 boinc boinc    988041 Feb 22 06:33 agis_schedconf.cvmfs.json
[2025-02-22 12:18:06] -rw-r--r-- 1 boinc boinc      6684 Feb 22 07:21 init_data.xml
[2025-02-22 12:18:06] -rw------- 1 boinc boinc 314493008 Feb 22 12:16 HITS.43205094._027650.pool.root.1
[2025-02-22 12:18:06] -rw-r--r-- 1 boinc boinc       533 Feb 22 12:17 boinc_task_state.xml
[2025-02-22 12:18:06] -rw------- 1 boinc boinc        97 Feb 22 12:17 pilot_heartbeat.json
[2025-02-22 12:18:06] -rw------- 1 boinc boinc      1030 Feb 22 12:17 memory_monitor_summary.json
[2025-02-22 12:18:06] -rw------- 1 boinc boinc   1582569 Feb 22 12:17 agis_ddmendpoints.agis.ALL.json
[2025-02-22 12:18:06] -rw------- 1 boinc boinc    436791 Feb 22 12:17 log.43205094._027650.job.log.tgz.1
[2025-02-22 12:18:06] -rw------- 1 boinc boinc      7701 Feb 22 12:17 heartbeat.json
[2025-02-22 12:18:06] -rw------- 1 boinc boinc      4298 Feb 22 12:18 pilotlog.txt
[2025-02-22 12:18:06] -rw-r--r-- 1 boinc boinc      8192 Feb 22 12:18 boinc_mmap_file
[2025-02-22 12:18:06] -rw------- 1 boinc boinc   2221663 Feb 22 12:18 log.43205094._027650.job.log.1
[2025-02-22 12:18:06] -rw-r--r-- 1 boinc boinc        29 Feb 22 12:18 wrapper_checkpoint.txt
[2025-02-22 12:18:06] -rw------- 1 boinc boinc       357 Feb 22 12:18 output.list
[2025-02-22 12:18:06] -rw-r--r-- 1 boinc boinc       620 Feb 22 12:18 runtime_log
[2025-02-22 12:18:06] -rw------- 1 boinc boinc   2682880 Feb 22 12:18 result.tar.gz
[2025-02-22 12:18:06] -rw------- 1 boinc boinc       792 Feb 22 12:18 tNFKDmiFM56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmwLqKDmKQMUzm.diag
[2025-02-22 12:18:06] -rw-r--r-- 1 boinc boinc     11501 Feb 22 12:18 runtime_log.err
[2025-02-22 12:18:06] -rw-r--r-- 1 boinc boinc     23220 Feb 22 12:18 stderr.txt
[2025-02-22 12:18:06] HITS file was successfully produced:
[2025-02-22 12:18:06] -rw------- 1 boinc boinc 314493008 Feb 22 12:16 shared/HITS.pool.root.1
[2025-02-22 12:18:06]  *** Contents of shared directory: ***
[2025-02-22 12:18:06] total 643300
[2025-02-22 12:18:06] -rw-r--r-- 3 boinc boinc 341028278 Feb 22 01:20 ATLAS.root_0
[2025-02-22 12:18:06] -rw-r--r-- 2 boinc boinc    503561 Feb 22 01:20 input.tar.gz
[2025-02-22 12:18:06] -rw-r--r-- 2 boinc boinc     17569 Feb 22 01:20 start_atlas.sh
[2025-02-22 12:18:06] -rw------- 1 boinc boinc 314493008 Feb 22 12:16 HITS.pool.root.1
[2025-02-22 12:18:06] -rw------- 1 boinc boinc   2682880 Feb 22 12:18 result.tar.gz
12:18:08 (807822): run_atlas exited; CPU time 78046.675747
12:18:08 (807822): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN