Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:26:39 (1178907): wrapper (7.7.26015): starting
07:26:39 (1178907): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 07:26:39] Arguments: --nthreads 4
[2025-02-22 07:26:39] Threads: 4
[2025-02-22 07:26:39] Checking for CVMFS
[2025-02-22 07:26:39] No cvmfs_config command found, will try listing directly
[2025-02-22 07:26:39] CVMFS is ok
[2025-02-22 07:26:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 07:26:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 07:26:39] Further information can be found at the LHC@home message board.
[2025-02-22 07:26:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 07:26:39] Checking for apptainer binary...
[2025-02-22 07:26:39] which: no apptainer in ((null))
[2025-02-22 07:26:39] apptainer is not installed, using version from CVMFS
[2025-02-22 07:26:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 07:26:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-02-22 07:26:39] apptainer works
[2025-02-22 07:26:39] Set ATHENA_PROC_NUMBER=4
[2025-02-22 07:26:39] Set ATHENA_CORE_NUMBER=4
[2025-02-22 07:26:40] Starting ATLAS job with PandaID=6520835605
[2025-02-22 07:26:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 13:21:51]  *** The last 200 lines of the pilot log: ***
[2025-02-22 13:21:51] 2025-02-22 12:21:31,463 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-22 13:21:51] 2025-02-22 12:21:31,470 | INFO     | fitting pss+swap vs Time
[2025-02-22 13:21:51] 2025-02-22 12:21:31,471 | INFO     | model: linear, x: [1740205643.0, 1740205704.0, 1740205765.0, 1740205826.0, 1740205887.0, 1740205948.0, 1740206009.0, 1740206070.0, 1740206131.0, 1740206192.0, 1740
[2025-02-22 13:21:51] 2025-02-22 12:21:31,471 | INFO     | sum of square deviations: 13181084350.0
[2025-02-22 13:21:51] 2025-02-22 12:21:31,474 | INFO     | sum of deviations: 162730699972.99997
[2025-02-22 13:21:51] 2025-02-22 12:21:31,474 | INFO     | mean x: 1740216257.0
[2025-02-22 13:21:51] 2025-02-22 12:21:31,475 | INFO     | mean y: 2316540.676217765
[2025-02-22 13:21:51] 2025-02-22 12:21:31,475 | INFO     | -- intersect: -21482001599.356323
[2025-02-22 13:21:51] 2025-02-22 12:21:31,475 | INFO     | intersect: -21482001599.356323
[2025-02-22 13:21:51] 2025-02-22 12:21:31,475 | INFO     | chi2: 5.1159638434358685
[2025-02-22 13:21:51] 2025-02-22 12:21:31,476 | INFO     | model: linear, x: [1740205643.0, 1740205704.0, 1740205765.0, 1740205826.0, 1740205887.0, 1740205948.0, 1740206009.0, 1740206070.0, 1740206131.0, 1740206192.0, 1740
[2025-02-22 13:21:51] 2025-02-22 12:21:31,476 | INFO     | sum of square deviations: 12622636670.0
[2025-02-22 13:21:51] 2025-02-22 12:21:31,479 | INFO     | sum of deviations: 182381150729.99997
[2025-02-22 13:21:51] 2025-02-22 12:21:31,479 | INFO     | mean x: 1740216104.5
[2025-02-22 13:21:51] 2025-02-22 12:21:31,479 | INFO     | mean y: 2321835.9244186045
[2025-02-22 13:21:51] 2025-02-22 12:21:31,479 | INFO     | -- intersect: -25141602049.004124
[2025-02-22 13:21:51] 2025-02-22 12:21:31,479 | INFO     | intersect: -25141602049.004124
[2025-02-22 13:21:51] 2025-02-22 12:21:31,480 | INFO     | chi2: 4.329953847915199
[2025-02-22 13:21:51] 2025-02-22 12:21:31,480 | INFO     | current chi2=4.329953847915199 (change=15.363869244876973 %)
[2025-02-22 13:21:51] 2025-02-22 12:21:31,480 | INFO     | right removable region: 343
[2025-02-22 13:21:51] 2025-02-22 12:21:31,480 | INFO     | model: linear, x: [1740205948.0, 1740206009.0, 1740206070.0, 1740206131.0, 1740206192.0, 1740206253.0, 1740206314.0, 1740206375.0, 1740206436.0, 1740206497.0, 1740
[2025-02-22 13:21:51] 2025-02-22 12:21:31,483 | INFO     | sum of square deviations: 12622636670.0
[2025-02-22 13:21:51] 2025-02-22 12:21:31,486 | INFO     | sum of deviations: 77597897571.5
[2025-02-22 13:21:51] 2025-02-22 12:21:31,486 | INFO     | mean x: 1740216409.5
[2025-02-22 13:21:51] 2025-02-22 12:21:31,486 | INFO     | mean y: 2339752.386627907
[2025-02-22 13:21:51] 2025-02-22 12:21:31,486 | INFO     | -- intersect: -10695673525.422825
[2025-02-22 13:21:51] 2025-02-22 12:21:31,486 | INFO     | intersect: -10695673525.422825
[2025-02-22 13:21:51] 2025-02-22 12:21:31,487 | INFO     | chi2: 2.5086786790224864
[2025-02-22 13:21:51] 2025-02-22 12:21:31,487 | INFO     | current chi2=2.5086786790224864 (change=50.9637136657779 %)
[2025-02-22 13:21:51] 2025-02-22 12:21:31,487 | INFO     | model: linear, x: [1740206253.0, 1740206314.0, 1740206375.0, 1740206436.0, 1740206497.0, 1740206558.0, 1740206619.0, 1740206680.0, 1740206741.0, 1740206802.0, 1740
[2025-02-22 13:21:51] 2025-02-22 12:21:31,487 | INFO     | sum of square deviations: 12080189290.0
[2025-02-22 13:21:51] 2025-02-22 12:21:31,490 | INFO     | sum of deviations: 8607241153.999977
[2025-02-22 13:21:51] 2025-02-22 12:21:31,491 | INFO     | mean x: 1740216562.0
[2025-02-22 13:21:51] 2025-02-22 12:21:31,491 | INFO     | mean y: 2359148.4542772863
[2025-02-22 13:21:51] 2025-02-22 12:21:31,491 | INFO     | -- intersect: -1237560462.8814447
[2025-02-22 13:21:51] 2025-02-22 12:21:31,491 | INFO     | intersect: -1237560462.8814447
[2025-02-22 13:21:51] 2025-02-22 12:21:31,491 | INFO     | chi2: 0.928769294043497
[2025-02-22 13:21:51] 2025-02-22 12:21:31,491 | INFO     | current chi2=0.928769294043497 (change=62.97774992828518 %)
[2025-02-22 13:21:51] 2025-02-22 12:21:31,492 | INFO     | model: linear, x: [1740206558.0, 1740206619.0, 1740206680.0, 1740206741.0, 1740206802.0, 1740206863.0, 1740206924.0, 1740206985.0, 1740207046.0, 1740207107.0, 1740
[2025-02-22 13:21:51] 2025-02-22 12:21:31,492 | INFO     | sum of square deviations: 11553509647.5
[2025-02-22 13:21:51] 2025-02-22 12:21:31,495 | INFO     | sum of deviations: -7193372051.999973
[2025-02-22 13:21:51] 2025-02-22 12:21:31,495 | INFO     | mean x: 1740216714.5
[2025-02-22 13:21:51] 2025-02-22 12:21:31,495 | INFO     | mean y: 2363701.48502994
[2025-02-22 13:21:51] 2025-02-22 12:21:31,495 | INFO     | -- intersect: 1085846267.4269056
[2025-02-22 13:21:51] 2025-02-22 12:21:31,495 | INFO     | intersect: 1085846267.4269056
[2025-02-22 13:21:51] 2025-02-22 12:21:31,496 | INFO     | chi2: 0.8174928114429558
[2025-02-22 13:21:51] 2025-02-22 12:21:31,496 | INFO     | current chi2=0.8174928114429558 (change=11.981068206517358 %)
[2025-02-22 13:21:51] 2025-02-22 12:21:31,496 | INFO     | left removable region: 30
[2025-02-22 13:21:51] 2025-02-22 12:21:31,496 | INFO     | model: linear, x: [1740207473.0, 1740207534.0, 1740207595.0, 1740207656.0, 1740207717.0, 1740207778.0, 1740207839.0, 1740207900.0, 1740207961.0, 1740208022.0, 1740
[2025-02-22 13:21:51] 2025-02-22 12:21:31,497 | INFO     | sum of square deviations: 9508390372.0
[2025-02-22 13:21:51] 2025-02-22 12:21:31,500 | INFO     | sum of deviations: 10040346240.0
[2025-02-22 13:21:51] 2025-02-22 12:21:31,500 | INFO     | mean x: 1740216989.0
[2025-02-22 13:21:51] 2025-02-22 12:21:31,500 | INFO     | mean y: 2371146.463258786
[2025-02-22 13:21:51] 2025-02-22 12:21:31,500 | INFO     | -- intersect: -1835203923.4184294
[2025-02-22 13:21:51] 2025-02-22 12:21:31,500 | INFO     | intersect: -1835203923.4184294
[2025-02-22 13:21:51] 2025-02-22 12:21:31,501 | INFO     | chi2: 0.0012319316019679376
[2025-02-22 13:21:51] 2025-02-22 12:21:31,501 | INFO     | -- intersect: -1835203923.4184294
[2025-02-22 13:21:51] 2025-02-22 12:21:31,501 | INFO     | current memory leak: 1.06 B/s (using 313 data points, chi2=0.00)
[2025-02-22 13:21:51] 2025-02-22 12:21:31,502 | INFO     | ..............................
[2025-02-22 13:21:51] 2025-02-22 12:21:31,502 | INFO     | . Timing measurements:
[2025-02-22 13:21:51] 2025-02-22 12:21:31,502 | INFO     | . get job = 0 s
[2025-02-22 13:21:51] 2025-02-22 12:21:31,502 | INFO     | . initial setup = 1 s
[2025-02-22 13:21:51] 2025-02-22 12:21:31,502 | INFO     | . payload setup = 7 s
[2025-02-22 13:21:51] 2025-02-22 12:21:31,502 | INFO     | . stage-in = 0 s
[2025-02-22 13:21:51] 2025-02-22 12:21:31,502 | INFO     | . payload execution = 21243 s
[2025-02-22 13:21:51] 2025-02-22 12:21:31,502 | INFO     | . stage-out = 1 s
[2025-02-22 13:21:51] 2025-02-22 12:21:31,502 | INFO     | . log creation = 0 s
[2025-02-22 13:21:51] 2025-02-22 12:21:31,503 | INFO     | ..............................
[2025-02-22 13:21:51] 2025-02-22 12:21:31,601 | INFO     | 
[2025-02-22 13:21:51] 2025-02-22 12:21:31,601 | INFO     | job summary report
[2025-02-22 13:21:51] 2025-02-22 12:21:31,601 | INFO     | --------------------------------------------------
[2025-02-22 13:21:51] 2025-02-22 12:21:31,601 | INFO     | PanDA job id: 6520835605
[2025-02-22 13:21:51] 2025-02-22 12:21:31,601 | INFO     | task id: 43205094
[2025-02-22 13:21:51] 2025-02-22 12:21:31,601 | INFO     | errors: (none)
[2025-02-22 13:21:51] 2025-02-22 12:21:31,601 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 13:21:51] 2025-02-22 12:21:31,601 | INFO     | pilot state: finished 
[2025-02-22 13:21:51] 2025-02-22 12:21:31,601 | INFO     | transexitcode: 0
[2025-02-22 13:21:51] 2025-02-22 12:21:31,602 | INFO     | exeerrorcode: 0
[2025-02-22 13:21:51] 2025-02-22 12:21:31,602 | INFO     | exeerrordiag: 
[2025-02-22 13:21:51] 2025-02-22 12:21:31,602 | INFO     | exitcode: 0
[2025-02-22 13:21:51] 2025-02-22 12:21:31,602 | INFO     | exitmsg: OK
[2025-02-22 13:21:51] 2025-02-22 12:21:31,602 | INFO     | cpuconsumptiontime: 81057 s
[2025-02-22 13:21:51] 2025-02-22 12:21:31,602 | INFO     | nevents: 400
[2025-02-22 13:21:51] 2025-02-22 12:21:31,602 | INFO     | neventsw: 0
[2025-02-22 13:21:51] 2025-02-22 12:21:31,602 | INFO     | pid: 1195135
[2025-02-22 13:21:51] 2025-02-22 12:21:31,602 | INFO     | pgrp: 1195135
[2025-02-22 13:21:51] 2025-02-22 12:21:31,602 | INFO     | corecount: 4
[2025-02-22 13:21:51] 2025-02-22 12:21:31,602 | INFO     | event service: False
[2025-02-22 13:21:51] 2025-02-22 12:21:31,602 | INFO     | sizes: {0: 2383320, 6: 2383526, 11: 2383554, 21254: 2416906, 21255: 2425925, 21262: 2426039}
[2025-02-22 13:21:51] 2025-02-22 12:21:31,602 | INFO     | --------------------------------------------------
[2025-02-22 13:21:51] 2025-02-22 12:21:31,602 | INFO     | 
[2025-02-22 13:21:51] 2025-02-22 12:21:31,602 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-02-22 13:21:51] 2025-02-22 12:21:31,620 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 13:21:51] 2025-02-22 12:21:31,620 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 13:21:51] 2025-02-22 12:21:31,620 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 13:21:51] 2025-02-22 12:21:31,620 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 13:21:51] 2025-02-22 12:21:31,620 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 13:21:51] 2025-02-22 12:21:31,620 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 13:21:51] 2025-02-22 12:21:31,620 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 13:21:51] 2025-02-22 12:21:31,620 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 13:21:51] 2025-02-22 12:21:31,620 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 13:21:51] 2025-02-22 12:21:31,621 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 13:21:51] 2025-02-22 12:21:31,621 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 13:21:51] 2025-02-22 12:21:31,621 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 13:21:51] 2025-02-22 12:21:31,621 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 13:21:51] 2025-02-22 12:21:31,621 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 13:21:51] 2025-02-22 12:21:31,621 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 13:21:51] 2025-02-22 12:21:31,621 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 13:21:51] 2025-02-22 12:21:31,621 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 13:21:51] 2025-02-22 12:21:31,621 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 13:21:51] 2025-02-22 12:21:31,621 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 13:21:51] 2025-02-22 12:21:31,621 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 13:21:51] 2025-02-22 12:21:31,621 | INFO     | job 6520835605 has completed (purged errors)
[2025-02-22 13:21:51] 2025-02-22 12:21:31,621 | INFO     | overall cleanup function is called
[2025-02-22 13:21:51] 2025-02-22 12:21:32,629 | INFO     | --- collectZombieJob: --- 10, [1195135]
[2025-02-22 13:21:51] 2025-02-22 12:21:32,629 | INFO     | zombie collector waiting for pid 1195135
[2025-02-22 13:21:51] 2025-02-22 12:21:32,629 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 13:21:51] 2025-02-22 12:21:32,629 | INFO     | collected zombie processes
[2025-02-22 13:21:51] 2025-02-22 12:21:32,630 | INFO     | will attempt to kill all subprocesses of pid=1195135
[2025-02-22 13:21:51] 2025-02-22 12:21:32,916 | INFO     | process IDs to be killed: [1195135] (in reverse order)
[2025-02-22 13:21:51] 2025-02-22 12:21:33,198 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 13:21:51] 2025-02-22 12:21:33,198 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 13:21:51] 2025-02-22 12:21:33,223 | INFO     | did not find any defunct processes belonging to 1195135
[2025-02-22 13:21:51] 2025-02-22 12:21:33,245 | INFO     | did not find any defunct processes belonging to 1195135
[2025-02-22 13:21:51] 2025-02-22 12:21:33,245 | INFO     | ready for new job
[2025-02-22 13:21:51] 2025-02-22 12:21:33,245 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 13:21:51] 2025-02-22 12:21:33,249 | INFO     | **************************************
[2025-02-22 13:21:51] 2025-02-22 12:21:33,249 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 13:21:51] 2025-02-22 12:21:33,249 | INFO     | **************************************
[2025-02-22 13:21:51] 2025-02-22 12:21:33,249 | INFO     | 
[2025-02-22 13:21:51] 2025-02-22 12:21:33,257 | INFO     | architecture information:
[2025-02-22 13:21:51] 2025-02-22 12:21:33,257 | INFO     | executing command: cat /etc/os-release
[2025-02-22 13:21:51] 2025-02-22 12:21:33,279 | INFO     | cat /etc/os-release:
[2025-02-22 13:21:51] NAME="CentOS Linux"
[2025-02-22 13:21:51] VERSION="7 (Core)"
[2025-02-22 13:21:51] ID="centos"
[2025-02-22 13:21:51] ID_LIKE="rhel fedora"
[2025-02-22 13:21:51] VERSION_ID="7"
[2025-02-22 13:21:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 13:21:51] ANSI_COLOR="0;31"
[2025-02-22 13:21:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 13:21:51] HOME_URL="https://www.centos.org/"
[2025-02-22 13:21:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 13:21:51] 
[2025-02-22 13:21:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 13:21:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 13:21:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 13:21:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 13:21:51] 
[2025-02-22 13:21:51] 2025-02-22 12:21:33,279 | INFO     | **************************************
[2025-02-22 13:21:51] 2025-02-22 12:21:33,782 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-02-22 13:21:51] 2025-02-22 12:21:33,810 | INFO     | sufficient remaining disk space (3253821505536 B)
[2025-02-22 13:21:51] 2025-02-22 12:21:33,811 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 13:21:51] 2025-02-22 12:21:33,811 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 13:21:51] 2025-02-22 12:21:33,811 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-22 13:21:51] 2025-02-22 12:21:33,812 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 13:21:51] 2025-02-22 12:21:33,812 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 13:21:51] 2025-02-22 12:21:33,812 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 13:21:51] 2025-02-22 12:21:33,815 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 13:21:51] 2025-02-22 12:21:33,816 | INFO     | aborting loop
[2025-02-22 13:21:51] 2025-02-22 12:21:33,858 | INFO     | all data control threads have been joined
[2025-02-22 13:21:51] 2025-02-22 12:21:34,273 | INFO     | all payload control threads have been joined
[2025-02-22 13:21:51] 2025-02-22 12:21:34,675 | INFO     | all job control threads have been joined
[2025-02-22 13:21:51] 2025-02-22 12:21:34,816 | INFO     | [job] retrieve thread has finished
[2025-02-22 13:21:51] 2025-02-22 12:21:34,817 | INFO     | [job] job monitor thread has finished
[2025-02-22 13:21:51] 2025-02-22 12:21:34,819 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 13:21:51] 2025-02-22 12:21:34,820 | INFO     | [job] validate thread has finished
[2025-02-22 13:21:51] 2025-02-22 12:21:34,863 | INFO     | [data] control thread has finished
[2025-02-22 13:21:51] 2025-02-22 12:21:35,061 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 13:21:51] 2025-02-22 12:21:35,062 | INFO     | [data] copytool_in thread has finished
[2025-02-22 13:21:51] 2025-02-22 12:21:35,096 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 13:21:51] 2025-02-22 12:21:35,173 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 13:21:51] 2025-02-22 12:21:35,278 | INFO     | [payload] control thread has finished
[2025-02-22 13:21:51] 2025-02-22 12:21:35,382 | INFO     | [payload] validate_post thread has finished
[2025-02-22 13:21:51] 2025-02-22 12:21:35,680 | INFO     | [job] control thread has finished
[2025-02-22 13:21:51] 2025-02-22 12:21:36,088 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 13:21:51] 2025-02-22 12:21:36,394 | INFO     | [payload] failed_post thread has finished
[2025-02-22 13:21:51] 2025-02-22 12:21:36,611 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 13:21:51] 2025-02-22 12:21:37,102 | INFO     | [data] copytool_out thread has finished
[2025-02-22 13:21:51] 2025-02-22 12:21:37,616 | INFO     | [job] queue monitor thread has finished
[2025-02-22 13:21:51] 2025-02-22 12:21:39,179 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 13:21:51] 2025-02-22 12:21:43,849 | INFO     | job.realtimelogging is not enabled
[2025-02-22 13:21:51] 2025-02-22 12:21:44,850 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 13:21:51] 2025-02-22 12:21:45,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22592652085056)>', '<ExcThread(monitor, started 22592417134336)>']
[2025-02-22 13:21:51] 2025-02-22 12:21:45,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 13:21:51] 2025-02-22 12:21:45,872 | INFO     | [monitor] control thread has ended
[2025-02-22 13:21:51] 2025-02-22 12:21:50,848 | INFO     | all workflow threads have been joined
[2025-02-22 13:21:51] 2025-02-22 12:21:50,849 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 13:21:51] 2025-02-22 12:21:50,849 | INFO     | traces error code: 0
[2025-02-22 13:21:51] 2025-02-22 12:21:50,849 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 13:21:51] 2025-02-22 12:21:51,003 [wrapper] ==== pilot stdout END ====
[2025-02-22 13:21:51] 2025-02-22 12:21:51,005 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 13:21:51] 2025-02-22 12:21:51,008 [wrapper] pilotpid: 1185210
[2025-02-22 13:21:51] 2025-02-22 12:21:51,010 [wrapper] Pilot exit status: 0
[2025-02-22 13:21:51] 2025-02-22 12:21:51,021 [wrapper] pandaids: 6520835605
[2025-02-22 13:21:51] 2025-02-22 12:21:51,161 [wrapper] cleanup supervisor_pilot 2577685 1185211
[2025-02-22 13:21:51] 2025-02-22 12:21:51,164 [wrapper] Test setup, not cleaning
[2025-02-22 13:21:51] 2025-02-22 12:21:51,168 [wrapper] apfmon messages muted
[2025-02-22 13:21:51] 2025-02-22 12:21:51,170 [wrapper] ==== wrapper stdout END ====
[2025-02-22 13:21:51] 2025-02-22 12:21:51,172 [wrapper] ==== wrapper stderr END ====
[2025-02-22 13:21:51]  *** Error codes and diagnostics ***
[2025-02-22 13:21:51]     "exeErrorCode": 0,
[2025-02-22 13:21:51]     "exeErrorDiag": "",
[2025-02-22 13:21:51]     "pilotErrorCode": 0,
[2025-02-22 13:21:51]     "pilotErrorDiag": "",
[2025-02-22 13:21:51]  *** Listing of results directory ***
[2025-02-22 13:21:51] total 669432
[2025-02-22 13:21:51] -rw-r--r-- 1 boinc boinc    491065 Feb 20 13:21 pilot3.tar.gz
[2025-02-22 13:21:51] -rw-r--r-- 1 boinc boinc      5118 Feb 20 13:52 queuedata.json
[2025-02-22 13:21:51] -rwx------ 1 boinc boinc     35865 Feb 20 13:53 runpilot2-wrapper.sh
[2025-02-22 13:21:51] -rw-r--r-- 1 boinc boinc       100 Feb 22 07:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 13:21:51] -rwxr-xr-x 1 boinc boinc      7986 Feb 22 07:26 run_atlas
[2025-02-22 13:21:51] -rw-r--r-- 1 boinc boinc       105 Feb 22 07:26 job.xml
[2025-02-22 13:21:51] -rw-r--r-- 2 boinc boinc 345433967 Feb 22 07:26 EVNT.43092757._001838.pool.root.1
[2025-02-22 13:21:51] -rw-r--r-- 1 boinc boinc      6675 Feb 22 07:26 init_data.xml
[2025-02-22 13:21:51] -rw-r--r-- 2 boinc boinc     17569 Feb 22 07:26 start_atlas.sh
[2025-02-22 13:21:51] drwxrwx--x 2 boinc boinc      4096 Feb 22 07:26 shared
[2025-02-22 13:21:51] -rw-r--r-- 2 boinc boinc    503557 Feb 22 07:26 input.tar.gz
[2025-02-22 13:21:51] -rw-r--r-- 1 boinc boinc         0 Feb 22 07:26 boinc_lockfile
[2025-02-22 13:21:51] -rw-r--r-- 1 boinc boinc      2547 Feb 22 07:26 pandaJob.out
[2025-02-22 13:21:51] -rw------- 1 boinc boinc       424 Feb 22 07:26 setup.sh.local
[2025-02-22 13:21:51] -rw------- 1 boinc boinc    988025 Feb 22 07:26 agis_schedconf.cvmfs.json
[2025-02-22 13:21:51] drwx------ 4 boinc boinc      4096 Feb 22 07:26 pilot3
[2025-02-22 13:21:51] -rw------- 1 boinc boinc 330739730 Feb 22 13:20 HITS.43205094._026972.pool.root.1
[2025-02-22 13:21:51] -rw------- 1 boinc boinc        95 Feb 22 13:20 pilot_heartbeat.json
[2025-02-22 13:21:51] -rw-r--r-- 1 boinc boinc       531 Feb 22 13:20 boinc_task_state.xml
[2025-02-22 13:21:51] -rw------- 1 boinc boinc      1032 Feb 22 13:21 memory_monitor_summary.json
[2025-02-22 13:21:51] -rw------- 1 boinc boinc   1582569 Feb 22 13:21 agis_ddmendpoints.agis.ALL.json
[2025-02-22 13:21:51] -rw------- 1 boinc boinc    441788 Feb 22 13:21 log.43205094._026972.job.log.tgz.1
[2025-02-22 13:21:51] -rw-r--r-- 1 boinc boinc      8192 Feb 22 13:21 boinc_mmap_file
[2025-02-22 13:21:51] -rw-r--r-- 1 boinc boinc        28 Feb 22 13:21 wrapper_checkpoint.txt
[2025-02-22 13:21:51] -rw------- 1 boinc boinc      7703 Feb 22 13:21 heartbeat.json
[2025-02-22 13:21:51] -rw------- 1 boinc boinc      4421 Feb 22 13:21 pilotlog.txt
[2025-02-22 13:21:51] -rw------- 1 boinc boinc   2316971 Feb 22 13:21 log.43205094._026972.job.log.1
[2025-02-22 13:21:51] -rw------- 1 boinc boinc       357 Feb 22 13:21 output.list
[2025-02-22 13:21:51] -rw-r--r-- 1 boinc boinc       620 Feb 22 13:21 runtime_log
[2025-02-22 13:21:51] -rw------- 1 boinc boinc   2775040 Feb 22 13:21 result.tar.gz
[2025-02-22 13:21:51] -rw-r--r-- 1 boinc boinc     11424 Feb 22 13:21 runtime_log.err
[2025-02-22 13:21:51] -rw------- 1 boinc boinc       667 Feb 22 13:21 CgUKDmNEL56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmprbKDmsmF7qn.diag
[2025-02-22 13:21:51] -rw-r--r-- 1 boinc boinc     21312 Feb 22 13:21 stderr.txt
[2025-02-22 13:21:51] HITS file was successfully produced:
[2025-02-22 13:21:51] -rw------- 1 boinc boinc 330739730 Feb 22 13:20 shared/HITS.pool.root.1
[2025-02-22 13:21:51]  *** Contents of shared directory: ***
[2025-02-22 13:21:51] total 663564
[2025-02-22 13:21:51] -rw-r--r-- 2 boinc boinc 345433967 Feb 22 07:26 ATLAS.root_0
[2025-02-22 13:21:51] -rw-r--r-- 2 boinc boinc     17569 Feb 22 07:26 start_atlas.sh
[2025-02-22 13:21:51] -rw-r--r-- 2 boinc boinc    503557 Feb 22 07:26 input.tar.gz
[2025-02-22 13:21:51] -rw------- 1 boinc boinc 330739730 Feb 22 13:20 HITS.pool.root.1
[2025-02-22 13:21:51] -rw------- 1 boinc boinc   2775040 Feb 22 13:21 result.tar.gz
13:21:52 (1178907): run_atlas exited; CPU time 80719.360240
13:21:52 (1178907): called boinc_finish(0)

</stderr_txt>
]]>

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