Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:43:14 (3383645): wrapper (7.7.26015): starting
12:43:14 (3383645): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 12:43:14] Arguments: --nthreads 4
[2025-02-22 12:43:14] Threads: 4
[2025-02-22 12:43:14] Checking for CVMFS
[2025-02-22 12:43:14] No cvmfs_config command found, will try listing directly
[2025-02-22 12:43:14] CVMFS is ok
[2025-02-22 12:43:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 12:43:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 12:43:14] Further information can be found at the LHC@home message board.
[2025-02-22 12:43:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 12:43:14] Checking for apptainer binary...
[2025-02-22 12:43:14] which: no apptainer in ((null))
[2025-02-22 12:43:14] apptainer is not installed, using version from CVMFS
[2025-02-22 12:43:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 12:43:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-02-22 12:43:15] apptainer works
[2025-02-22 12:43:15] Set ATHENA_PROC_NUMBER=4
[2025-02-22 12:43:15] Set ATHENA_CORE_NUMBER=4
[2025-02-22 12:43:15] Starting ATLAS job with PandaID=6520789890
[2025-02-22 12:43:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 19:17:29]  *** The last 200 lines of the pilot log: ***
[2025-02-22 19:17:29] 2025-02-22 18:17:17,581 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-22 19:17:29] 2025-02-22 18:17:17,581 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-22 19:17:29] 2025-02-22 18:17:17,589 | INFO     | fitting pss+swap vs Time
[2025-02-22 19:17:29] 2025-02-22 18:17:17,589 | INFO     | model: linear, x: [1740224629.0, 1740224690.0, 1740224751.0, 1740224812.0, 1740224873.0, 1740224934.0, 1740224995.0, 1740225056.0, 1740225117.0, 1740225178.0, 1740
[2025-02-22 19:17:29] 2025-02-22 18:17:17,590 | INFO     | sum of square deviations: 17972496978.0
[2025-02-22 19:17:29] 2025-02-22 18:17:17,594 | INFO     | sum of deviations: 115517831157.00003
[2025-02-22 19:17:29] 2025-02-22 18:17:17,594 | INFO     | mean x: 1740236402.0
[2025-02-22 19:17:29] 2025-02-22 18:17:17,594 | INFO     | mean y: 2355661.6330749355
[2025-02-22 19:17:29] 2025-02-22 18:17:17,595 | INFO     | -- intersect: -11182975742.544012
[2025-02-22 19:17:29] 2025-02-22 18:17:17,595 | INFO     | intersect: -11182975742.544012
[2025-02-22 19:17:29] 2025-02-22 18:17:17,595 | INFO     | chi2: 3.3748664905254393
[2025-02-22 19:17:29] 2025-02-22 18:17:17,596 | INFO     | model: linear, x: [1740224629.0, 1740224690.0, 1740224751.0, 1740224812.0, 1740224873.0, 1740224934.0, 1740224995.0, 1740225056.0, 1740225117.0, 1740225178.0, 1740
[2025-02-22 19:17:29] 2025-02-22 18:17:17,596 | INFO     | sum of square deviations: 17284846875.5
[2025-02-22 19:17:29] 2025-02-22 18:17:17,600 | INFO     | sum of deviations: 113849437267.49995
[2025-02-22 19:17:29] 2025-02-22 18:17:17,600 | INFO     | mean x: 1740236249.5
[2025-02-22 19:17:29] 2025-02-22 18:17:17,600 | INFO     | mean y: 2355291.59947644
[2025-02-22 19:17:29] 2025-02-22 18:17:17,600 | INFO     | -- intersect: -11459991997.048315
[2025-02-22 19:17:29] 2025-02-22 18:17:17,600 | INFO     | intersect: -11459991997.048315
[2025-02-22 19:17:29] 2025-02-22 18:17:17,601 | INFO     | chi2: 3.376048408405171
[2025-02-22 19:17:29] 2025-02-22 18:17:17,601 | INFO     | current chi2=3.376048408405171 (change=-0.03502117440941014 %)
[2025-02-22 19:17:29] 2025-02-22 18:17:17,601 | INFO     | right removable region: 381
[2025-02-22 19:17:29] 2025-02-22 18:17:17,602 | INFO     | model: linear, x: [1740224934.0, 1740224995.0, 1740225056.0, 1740225117.0, 1740225178.0, 1740225239.0, 1740225300.0, 1740225361.0, 1740225422.0, 1740225483.0, 1740
[2025-02-22 19:17:29] 2025-02-22 18:17:17,602 | INFO     | sum of square deviations: 17284846875.5
[2025-02-22 19:17:29] 2025-02-22 18:17:17,606 | INFO     | sum of deviations: 35642745330.49999
[2025-02-22 19:17:29] 2025-02-22 18:17:17,606 | INFO     | mean x: 1740236554.5
[2025-02-22 19:17:29] 2025-02-22 18:17:17,606 | INFO     | mean y: 2373334.7931937175
[2025-02-22 19:17:29] 2025-02-22 18:17:17,606 | INFO     | -- intersect: -3586134493.690304
[2025-02-22 19:17:29] 2025-02-22 18:17:17,606 | INFO     | intersect: -3586134493.690304
[2025-02-22 19:17:29] 2025-02-22 18:17:17,607 | INFO     | chi2: 1.4044210264859311
[2025-02-22 19:17:29] 2025-02-22 18:17:17,607 | INFO     | current chi2=1.4044210264859311 (change=58.385878954658324 %)
[2025-02-22 19:17:29] 2025-02-22 18:17:17,607 | INFO     | model: linear, x: [1740225239.0, 1740225300.0, 1740225361.0, 1740225422.0, 1740225483.0, 1740225544.0, 1740225605.0, 1740225666.0, 1740225727.0, 1740225788.0, 1740
[2025-02-22 19:17:29] 2025-02-22 18:17:17,607 | INFO     | sum of square deviations: 16614964548.0
[2025-02-22 19:17:29] 2025-02-22 18:17:17,611 | INFO     | sum of deviations: -26598029104.000015
[2025-02-22 19:17:29] 2025-02-22 18:17:17,611 | INFO     | mean x: 1740236707.0
[2025-02-22 19:17:29] 2025-02-22 18:17:17,611 | INFO     | mean y: 2387512.0901856762
[2025-02-22 19:17:29] 2025-02-22 18:17:17,611 | INFO     | -- intersect: 2788241580.3859167
[2025-02-22 19:17:29] 2025-02-22 18:17:17,611 | INFO     | intersect: 2788241580.3859167
[2025-02-22 19:17:29] 2025-02-22 18:17:17,612 | INFO     | chi2: 0.33979316230602863
[2025-02-22 19:17:29] 2025-02-22 18:17:17,613 | INFO     | current chi2=0.33979316230602863 (change=75.80546318391136 %)
[2025-02-22 19:17:29] 2025-02-22 18:17:17,613 | INFO     | model: linear, x: [1740225544.0, 1740225605.0, 1740225666.0, 1740225727.0, 1740225788.0, 1740225849.0, 1740225910.0, 1740225971.0, 1740226032.0, 1740226093.0, 1740
[2025-02-22 19:17:29] 2025-02-22 18:17:17,614 | INFO     | sum of square deviations: 15962617433.0
[2025-02-22 19:17:29] 2025-02-22 18:17:17,617 | INFO     | sum of deviations: -36656702183.99999
[2025-02-22 19:17:29] 2025-02-22 18:17:17,617 | INFO     | mean x: 1740236859.5
[2025-02-22 19:17:29] 2025-02-22 18:17:17,617 | INFO     | mean y: 2389847.430107527
[2025-02-22 19:17:29] 2025-02-22 18:17:17,617 | INFO     | -- intersect: 3998685853.1486416
[2025-02-22 19:17:29] 2025-02-22 18:17:17,618 | INFO     | intersect: 3998685853.1486416
[2025-02-22 19:17:29] 2025-02-22 18:17:17,618 | INFO     | chi2: 0.27594745733663945
[2025-02-22 19:17:29] 2025-02-22 18:17:17,618 | INFO     | current chi2=0.27594745733663945 (change=18.789579088671506 %)
[2025-02-22 19:17:29] 2025-02-22 18:17:17,618 | INFO     | left removable region: 30
[2025-02-22 19:17:29] 2025-02-22 18:17:17,619 | INFO     | model: linear, x: [1740226459.0, 1740226520.0, 1740226581.0, 1740226642.0, 1740226703.0, 1740226764.0, 1740226825.0, 1740226886.0, 1740226947.0, 1740227008.0, 1740
[2025-02-22 19:17:29] 2025-02-22 18:17:17,619 | INFO     | sum of square deviations: 13408995600.0
[2025-02-22 19:17:29] 2025-02-22 18:17:17,622 | INFO     | sum of deviations: 13535394127.000002
[2025-02-22 19:17:29] 2025-02-22 18:17:17,622 | INFO     | mean x: 1740237134.0
[2025-02-22 19:17:29] 2025-02-22 18:17:17,623 | INFO     | mean y: 2377140.923076923
[2025-02-22 19:17:29] 2025-02-22 18:17:17,623 | INFO     | -- intersect: -1754264160.6171308
[2025-02-22 19:17:29] 2025-02-22 18:17:17,623 | INFO     | intersect: -1754264160.6171308
[2025-02-22 19:17:29] 2025-02-22 18:17:17,623 | INFO     | chi2: 0.001862596156044467
[2025-02-22 19:17:29] 2025-02-22 18:17:17,623 | INFO     | -- intersect: -1754264160.6171308
[2025-02-22 19:17:29] 2025-02-22 18:17:17,623 | INFO     | current memory leak: 1.01 B/s (using 351 data points, chi2=0.00)
[2025-02-22 19:17:29] 2025-02-22 18:17:17,624 | INFO     | ..............................
[2025-02-22 19:17:29] 2025-02-22 18:17:17,624 | INFO     | . Timing measurements:
[2025-02-22 19:17:29] 2025-02-22 18:17:17,625 | INFO     | . get job = 0 s
[2025-02-22 19:17:29] 2025-02-22 18:17:17,625 | INFO     | . initial setup = 1 s
[2025-02-22 19:17:29] 2025-02-22 18:17:17,625 | INFO     | . payload setup = 5 s
[2025-02-22 19:17:29] 2025-02-22 18:17:17,625 | INFO     | . stage-in = 0 s
[2025-02-22 19:17:29] 2025-02-22 18:17:17,625 | INFO     | . payload execution = 23599 s
[2025-02-22 19:17:29] 2025-02-22 18:17:17,625 | INFO     | . stage-out = 1 s
[2025-02-22 19:17:29] 2025-02-22 18:17:17,625 | INFO     | . log creation = 0 s
[2025-02-22 19:17:29] 2025-02-22 18:17:17,625 | INFO     | ..............................
[2025-02-22 19:17:29] 2025-02-22 18:17:17,726 | INFO     | 
[2025-02-22 19:17:29] 2025-02-22 18:17:17,727 | INFO     | job summary report
[2025-02-22 19:17:29] 2025-02-22 18:17:17,727 | INFO     | --------------------------------------------------
[2025-02-22 19:17:29] 2025-02-22 18:17:17,727 | INFO     | PanDA job id: 6520789890
[2025-02-22 19:17:29] 2025-02-22 18:17:17,727 | INFO     | task id: 43205075
[2025-02-22 19:17:29] 2025-02-22 18:17:17,727 | INFO     | errors: (none)
[2025-02-22 19:17:29] 2025-02-22 18:17:17,727 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 19:17:29] 2025-02-22 18:17:17,727 | INFO     | pilot state: finished 
[2025-02-22 19:17:29] 2025-02-22 18:17:17,727 | INFO     | transexitcode: 0
[2025-02-22 19:17:29] 2025-02-22 18:17:17,727 | INFO     | exeerrorcode: 0
[2025-02-22 19:17:29] 2025-02-22 18:17:17,727 | INFO     | exeerrordiag: 
[2025-02-22 19:17:29] 2025-02-22 18:17:17,728 | INFO     | exitcode: 0
[2025-02-22 19:17:29] 2025-02-22 18:17:17,728 | INFO     | exitmsg: OK
[2025-02-22 19:17:29] 2025-02-22 18:17:17,728 | INFO     | cpuconsumptiontime: 90160 s
[2025-02-22 19:17:29] 2025-02-22 18:17:17,728 | INFO     | nevents: 400
[2025-02-22 19:17:29] 2025-02-22 18:17:17,728 | INFO     | neventsw: 0
[2025-02-22 19:17:29] 2025-02-22 18:17:17,728 | INFO     | pid: 3394414
[2025-02-22 19:17:29] 2025-02-22 18:17:17,728 | INFO     | pgrp: 3394414
[2025-02-22 19:17:29] 2025-02-22 18:17:17,728 | INFO     | corecount: 4
[2025-02-22 19:17:29] 2025-02-22 18:17:17,728 | INFO     | event service: False
[2025-02-22 19:17:29] 2025-02-22 18:17:17,728 | INFO     | sizes: {0: 2383327, 5: 2383533, 11: 2383589, 23607: 2418348, 23610: 2427311, 23613: 2427367, 23618: 2427665}
[2025-02-22 19:17:29] 2025-02-22 18:17:17,728 | INFO     | --------------------------------------------------
[2025-02-22 19:17:29] 2025-02-22 18:17:17,728 | INFO     | 
[2025-02-22 19:17:29] 2025-02-22 18:17:17,728 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2025-02-22 19:17:29] 2025-02-22 18:17:17,750 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 19:17:29] 2025-02-22 18:17:17,750 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 19:17:29] 2025-02-22 18:17:17,750 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 19:17:29] 2025-02-22 18:17:17,750 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 19:17:29] 2025-02-22 18:17:17,750 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 19:17:29] 2025-02-22 18:17:17,751 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 19:17:29] 2025-02-22 18:17:17,751 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 19:17:29] 2025-02-22 18:17:17,751 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 19:17:29] 2025-02-22 18:17:17,751 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 19:17:29] 2025-02-22 18:17:17,751 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 19:17:29] 2025-02-22 18:17:17,751 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 19:17:29] 2025-02-22 18:17:17,751 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 19:17:29] 2025-02-22 18:17:17,751 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 19:17:29] 2025-02-22 18:17:17,751 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 19:17:29] 2025-02-22 18:17:17,751 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 19:17:29] 2025-02-22 18:17:17,751 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 19:17:29] 2025-02-22 18:17:17,752 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 19:17:29] 2025-02-22 18:17:17,752 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 19:17:29] 2025-02-22 18:17:17,752 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 19:17:29] 2025-02-22 18:17:17,752 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 19:17:29] 2025-02-22 18:17:17,752 | INFO     | job 6520789890 has completed (purged errors)
[2025-02-22 19:17:29] 2025-02-22 18:17:17,752 | INFO     | overall cleanup function is called
[2025-02-22 19:17:29] 2025-02-22 18:17:18,760 | INFO     | --- collectZombieJob: --- 10, [3394414]
[2025-02-22 19:17:29] 2025-02-22 18:17:18,760 | INFO     | zombie collector waiting for pid 3394414
[2025-02-22 19:17:29] 2025-02-22 18:17:18,761 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 19:17:29] 2025-02-22 18:17:18,761 | INFO     | collected zombie processes
[2025-02-22 19:17:29] 2025-02-22 18:17:18,761 | INFO     | will attempt to kill all subprocesses of pid=3394414
[2025-02-22 19:17:29] 2025-02-22 18:17:18,919 | INFO     | process IDs to be killed: [3394414] (in reverse order)
[2025-02-22 19:17:29] 2025-02-22 18:17:19,030 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 19:17:29] 2025-02-22 18:17:19,031 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 19:17:29] 2025-02-22 18:17:19,043 | INFO     | did not find any defunct processes belonging to 3394414
[2025-02-22 19:17:29] 2025-02-22 18:17:19,055 | INFO     | did not find any defunct processes belonging to 3394414
[2025-02-22 19:17:29] 2025-02-22 18:17:19,055 | INFO     | ready for new job
[2025-02-22 19:17:29] 2025-02-22 18:17:19,055 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 19:17:29] 2025-02-22 18:17:19,058 | INFO     | **************************************
[2025-02-22 19:17:29] 2025-02-22 18:17:19,058 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 19:17:29] 2025-02-22 18:17:19,059 | INFO     | **************************************
[2025-02-22 19:17:29] 2025-02-22 18:17:19,059 | INFO     | 
[2025-02-22 19:17:29] 2025-02-22 18:17:19,063 | INFO     | architecture information:
[2025-02-22 19:17:29] 2025-02-22 18:17:19,063 | INFO     | executing command: cat /etc/os-release
[2025-02-22 19:17:29] 2025-02-22 18:17:19,077 | INFO     | cat /etc/os-release:
[2025-02-22 19:17:29] NAME="CentOS Linux"
[2025-02-22 19:17:29] VERSION="7 (Core)"
[2025-02-22 19:17:29] ID="centos"
[2025-02-22 19:17:29] ID_LIKE="rhel fedora"
[2025-02-22 19:17:29] VERSION_ID="7"
[2025-02-22 19:17:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 19:17:29] ANSI_COLOR="0;31"
[2025-02-22 19:17:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 19:17:29] HOME_URL="https://www.centos.org/"
[2025-02-22 19:17:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 19:17:29] 
[2025-02-22 19:17:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 19:17:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 19:17:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 19:17:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 19:17:29] 
[2025-02-22 19:17:29] 2025-02-22 18:17:19,077 | INFO     | **************************************
[2025-02-22 19:17:29] 2025-02-22 18:17:19,580 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2025-02-22 19:17:29] 2025-02-22 18:17:19,596 | INFO     | sufficient remaining disk space (642249654272 B)
[2025-02-22 19:17:29] 2025-02-22 18:17:19,596 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 19:17:29] 2025-02-22 18:17:19,596 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 19:17:29] 2025-02-22 18:17:19,597 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 19:17:29] 2025-02-22 18:17:19,597 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-22 19:17:29] 2025-02-22 18:17:19,597 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 19:17:29] 2025-02-22 18:17:19,597 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 19:17:29] 2025-02-22 18:17:19,597 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 19:17:29] 2025-02-22 18:17:19,598 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 19:17:29] 2025-02-22 18:17:19,598 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 19:17:29] 2025-02-22 18:17:19,598 | INFO     | aborting loop
[2025-02-22 19:17:29] 2025-02-22 18:17:20,329 | INFO     | all data control threads have been joined
[2025-02-22 19:17:29] 2025-02-22 18:17:20,433 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 19:17:29] 2025-02-22 18:17:20,601 | INFO     | [job] retrieve thread has finished
[2025-02-22 19:17:29] 2025-02-22 18:17:20,602 | INFO     | [job] queue monitor thread has finished
[2025-02-22 19:17:29] 2025-02-22 18:17:20,604 | INFO     | [job] job monitor thread has finished
[2025-02-22 19:17:29] 2025-02-22 18:17:20,618 | INFO     | all payload control threads have been joined
[2025-02-22 19:17:29] 2025-02-22 18:17:20,756 | INFO     | all job control threads have been joined
[2025-02-22 19:17:29] 2025-02-22 18:17:20,772 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 19:17:29] 2025-02-22 18:17:20,949 | INFO     | [payload] failed_post thread has finished
[2025-02-22 19:17:29] 2025-02-22 18:17:21,031 | INFO     | [payload] validate_post thread has finished
[2025-02-22 19:17:29] 2025-02-22 18:17:21,334 | INFO     | [data] control thread has finished
[2025-02-22 19:17:29] 2025-02-22 18:17:21,623 | INFO     | [payload] control thread has finished
[2025-02-22 19:17:29] 2025-02-22 18:17:21,635 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 19:17:29] 2025-02-22 18:17:21,635 | INFO     | [data] copytool_in thread has finished
[2025-02-22 19:17:29] 2025-02-22 18:17:21,647 | INFO     | [job] validate thread has finished
[2025-02-22 19:17:29] 2025-02-22 18:17:21,747 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 19:17:29] 2025-02-22 18:17:21,761 | INFO     | [job] control thread has finished
[2025-02-22 19:17:29] 2025-02-22 18:17:21,772 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 19:17:29] 2025-02-22 18:17:22,438 | INFO     | [data] copytool_out thread has finished
[2025-02-22 19:17:29] 2025-02-22 18:17:23,604 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 19:17:29] 2025-02-22 18:17:24,522 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23380874348352)>', '<ExcThread(monitor, started 23380640102144)>']
[2025-02-22 19:17:29] 2025-02-22 18:17:24,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 19:17:29] 2025-02-22 18:17:24,621 | INFO     | [monitor] control thread has ended
[2025-02-22 19:17:29] 2025-02-22 18:17:29,547 | INFO     | all workflow threads have been joined
[2025-02-22 19:17:29] 2025-02-22 18:17:29,547 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 19:17:29] 2025-02-22 18:17:29,547 | INFO     | traces error code: 0
[2025-02-22 19:17:29] 2025-02-22 18:17:29,548 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 19:17:29] 2025-02-22 18:17:29,735 [wrapper] ==== pilot stdout END ====
[2025-02-22 19:17:29] 2025-02-22 18:17:29,737 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 19:17:29] 2025-02-22 18:17:29,740 [wrapper] pilotpid: 3387353
[2025-02-22 19:17:29] 2025-02-22 18:17:29,743 [wrapper] Pilot exit status: 0
[2025-02-22 19:17:29] 2025-02-22 18:17:29,752 [wrapper] pandaids: 6520789890
[2025-02-22 19:17:29] 2025-02-22 18:17:29,818 [wrapper] cleanup supervisor_pilot    7977 3387354
[2025-02-22 19:17:29] 2025-02-22 18:17:29,821 [wrapper] Test setup, not cleaning
[2025-02-22 19:17:29] 2025-02-22 18:17:29,826 [wrapper] apfmon messages muted
[2025-02-22 19:17:29] 2025-02-22 18:17:29,828 [wrapper] ==== wrapper stdout END ====
[2025-02-22 19:17:29] 2025-02-22 18:17:29,831 [wrapper] ==== wrapper stderr END ====
[2025-02-22 19:17:29]  *** Error codes and diagnostics ***
[2025-02-22 19:17:29]     "exeErrorCode": 0,
[2025-02-22 19:17:29]     "exeErrorDiag": "",
[2025-02-22 19:17:29]     "pilotErrorCode": 0,
[2025-02-22 19:17:29]     "pilotErrorDiag": "",
[2025-02-22 19:17:29]  *** Listing of results directory ***
[2025-02-22 19:17:29] total 668544
[2025-02-22 19:17:29] -rw-r--r-- 1 boinc boinc    491065 Feb 20 13:21 pilot3.tar.gz
[2025-02-22 19:17:29] -rwx------ 1 boinc boinc     35865 Feb 20 13:23 runpilot2-wrapper.sh
[2025-02-22 19:17:29] -rw-r--r-- 1 boinc boinc      5118 Feb 20 13:23 queuedata.json
[2025-02-22 19:17:29] -rw-r--r-- 1 boinc boinc       100 Feb 22 12:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 19:17:29] -rwxr-xr-x 1 boinc boinc      7986 Feb 22 12:43 run_atlas
[2025-02-22 19:17:29] -rw-r--r-- 1 boinc boinc       105 Feb 22 12:43 job.xml
[2025-02-22 19:17:29] -rw-r--r-- 2 boinc boinc 345361424 Feb 22 12:43 EVNT.43092757._000614.pool.root.1
[2025-02-22 19:17:29] -rw-r--r-- 1 boinc boinc      6636 Feb 22 12:43 init_data.xml
[2025-02-22 19:17:29] drwxrwx--x 2 boinc boinc      4096 Feb 22 12:43 shared
[2025-02-22 19:17:29] -rw-r--r-- 2 boinc boinc    503554 Feb 22 12:43 input.tar.gz
[2025-02-22 19:17:29] -rw-r--r-- 2 boinc boinc     17569 Feb 22 12:43 start_atlas.sh
[2025-02-22 19:17:29] -rw-r--r-- 1 boinc boinc         0 Feb 22 12:43 boinc_lockfile
[2025-02-22 19:17:29] -rw-r--r-- 1 boinc boinc      2554 Feb 22 12:43 pandaJob.out
[2025-02-22 19:17:29] -rw------- 1 boinc boinc       424 Feb 22 12:43 setup.sh.local
[2025-02-22 19:17:29] -rw------- 1 boinc boinc    988064 Feb 22 12:43 agis_schedconf.cvmfs.json
[2025-02-22 19:17:29] drwx------ 4 boinc boinc      4096 Feb 22 12:43 pilot3
[2025-02-22 19:17:29] -rw------- 1 boinc boinc 329225814 Feb 22 19:16 HITS.43205075._054937.pool.root.1
[2025-02-22 19:17:29] -rw------- 1 boinc boinc        95 Feb 22 19:16 pilot_heartbeat.json
[2025-02-22 19:17:29] -rw-r--r-- 1 boinc boinc       531 Feb 22 19:16 boinc_task_state.xml
[2025-02-22 19:17:29] -rw------- 1 boinc boinc      1039 Feb 22 19:17 memory_monitor_summary.json
[2025-02-22 19:17:29] -rw------- 1 boinc boinc   1582569 Feb 22 19:17 agis_ddmendpoints.agis.ALL.json
[2025-02-22 19:17:29] -rw------- 1 boinc boinc    467844 Feb 22 19:17 log.43205075._054937.job.log.tgz.1
[2025-02-22 19:17:29] -rw-r--r-- 1 boinc boinc      8192 Feb 22 19:17 boinc_mmap_file
[2025-02-22 19:17:29] -rw-r--r-- 1 boinc boinc        28 Feb 22 19:17 wrapper_checkpoint.txt
[2025-02-22 19:17:29] -rw------- 1 boinc boinc      7746 Feb 22 19:17 heartbeat.json
[2025-02-22 19:17:29] -rw------- 1 boinc boinc      4348 Feb 22 19:17 pilotlog.txt
[2025-02-22 19:17:29] -rw------- 1 boinc boinc   2630384 Feb 22 19:17 log.43205075._054937.job.log.1
[2025-02-22 19:17:29] -rw------- 1 boinc boinc       357 Feb 22 19:17 output.list
[2025-02-22 19:17:29] -rw-r--r-- 1 boinc boinc       620 Feb 22 19:17 runtime_log
[2025-02-22 19:17:29] -rw------- 1 boinc boinc   3112960 Feb 22 19:17 result.tar.gz
[2025-02-22 19:17:29] -rw------- 1 boinc boinc       666 Feb 22 19:17 EjsNDmUlK56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm5BqKDmpT1TDn.diag
[2025-02-22 19:17:29] -rw-r--r-- 1 boinc boinc     11424 Feb 22 19:17 runtime_log.err
[2025-02-22 19:17:29] -rw-r--r-- 1 boinc boinc     21352 Feb 22 19:17 stderr.txt
[2025-02-22 19:17:29] HITS file was successfully produced:
[2025-02-22 19:17:29] -rw------- 1 boinc boinc 329225814 Feb 22 19:16 shared/HITS.pool.root.1
[2025-02-22 19:17:29]  *** Contents of shared directory: ***
[2025-02-22 19:17:29] total 662340
[2025-02-22 19:17:29] -rw-r--r-- 2 boinc boinc 345361424 Feb 22 12:43 ATLAS.root_0
[2025-02-22 19:17:29] -rw-r--r-- 2 boinc boinc    503554 Feb 22 12:43 input.tar.gz
[2025-02-22 19:17:29] -rw-r--r-- 2 boinc boinc     17569 Feb 22 12:43 start_atlas.sh
[2025-02-22 19:17:29] -rw------- 1 boinc boinc 329225814 Feb 22 19:16 HITS.pool.root.1
[2025-02-22 19:17:29] -rw------- 1 boinc boinc   3112960 Feb 22 19:17 result.tar.gz
19:17:31 (3383645): run_atlas exited; CPU time 90250.644357
19:17:31 (3383645): called boinc_finish(0)

</stderr_txt>
]]>

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