Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:58:04 (30563): wrapper (7.7.26015): starting
08:58:04 (30563): wrapper: running run_atlas (--nthreads 10)
[2025-02-20 08:58:04] Arguments: --nthreads 10
[2025-02-20 08:58:04] Threads: 10
[2025-02-20 08:58:04] Checking for CVMFS
[2025-02-20 08:58:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-20 08:58:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-20 08:58:06] Running cvmfs_config stat atlas.cern.ch
[2025-02-20 08:58:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-20 08:58:07] 2.11.2.0 26758 133957 202176 142866 3 327 18043397 18432000 8491 130560 0 42441715 99.334 67252749 45511 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-20 08:58:07] CVMFS is ok
[2025-02-20 08:58:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-20 08:58:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-20 08:58:07] Further information can be found at the LHC@home message board.
[2025-02-20 08:58:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-20 08:58:07] Checking for apptainer binary...
[2025-02-20 08:58:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-20 08:58:07] Running /usr/bin/apptainer --version
[2025-02-20 08:58:08] apptainer version 1.3.2-1.el7
[2025-02-20 08:58:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-20 08:58:43] c-211-2.aglt2.org
[2025-02-20 08:58:43] apptainer works
[2025-02-20 08:58:43] Set ATHENA_PROC_NUMBER=10
[2025-02-20 08:58:43] Set ATHENA_CORE_NUMBER=10
[2025-02-20 08:58:43] Starting ATLAS job with PandaID=6520505151
[2025-02-20 08:58:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-21 05:09:25]  *** The last 200 lines of the pilot log: ***
[2025-02-21 05:09:25] 2025-02-21 10:09:05,861 | INFO     | PID=38918 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-21 05:09:25] 2025-02-21 10:09:05,861 | INFO     | .. there are 7 such processes running
[2025-02-21 05:09:25] 2025-02-21 10:09:07,639 | INFO     | monitor loop #4327: job 0:6520505151 is in state 'finished'
[2025-02-21 05:09:25] 2025-02-21 10:09:07,640 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-21 05:09:25] 2025-02-21 10:09:07,737 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-21 05:09:25] 2025-02-21 10:09:07,738 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6520505151/memory_monitor_summary.json (trf name=prmon)
[2025-02-21 05:09:25] 2025-02-21 10:09:07,738 | INFO     | extracted standard info from prmon json
[2025-02-21 05:09:25] 2025-02-21 10:09:07,739 | INFO     | extracted standard memory fields from prmon json
[2025-02-21 05:09:25] 2025-02-21 10:09:07,739 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-21 05:09:25] 2025-02-21 10:09:07,739 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-21 05:09:25] 2025-02-21 10:09:07,739 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-21 05:09:25] 2025-02-21 10:09:07,784 | INFO     | fitting pss+swap vs Time
[2025-02-21 05:09:25] 2025-02-21 10:09:07,786 | INFO     | model: linear, x: [1740060365.0, 1740060426.0, 1740060487.0, 1740060548.0, 1740060609.0, 1740060670.0, 1740060731.0, 1740060792.0, 1740060854.0, 1740060915.0, 1740
[2025-02-21 05:09:25] 2025-02-21 10:09:07,787 | INFO     | sum of square deviations: 513372565829.1342
[2025-02-21 05:09:25] 2025-02-21 10:09:07,857 | INFO     | sum of deviations: 1919521702395.6455
[2025-02-21 05:09:25] 2025-02-21 10:09:07,858 | INFO     | mean x: 1740096417.0270498
[2025-02-21 05:09:25] 2025-02-21 10:09:07,858 | INFO     | mean y: 2613208.1360946745
[2025-02-21 05:09:25] 2025-02-21 10:09:07,858 | INFO     | -- intersect: -6503680776.135804
[2025-02-21 05:09:25] 2025-02-21 10:09:07,858 | INFO     | intersect: -6503680776.135804
[2025-02-21 05:09:25] 2025-02-21 10:09:07,864 | INFO     | chi2: 11.11909299744298
[2025-02-21 05:09:25] 2025-02-21 10:09:07,865 | INFO     | model: linear, x: [1740060365.0, 1740060426.0, 1740060487.0, 1740060548.0, 1740060609.0, 1740060670.0, 1740060731.0, 1740060792.0, 1740060854.0, 1740060915.0, 1740
[2025-02-21 05:09:25] 2025-02-21 10:09:07,866 | INFO     | sum of square deviations: 506890966081.4
[2025-02-21 05:09:25] 2025-02-21 10:09:07,933 | INFO     | sum of deviations: 2080734149017.7
[2025-02-21 05:09:25] 2025-02-21 10:09:07,933 | INFO     | mean x: 1740096264.5305603
[2025-02-21 05:09:25] 2025-02-21 10:09:07,937 | INFO     | mean y: 2616990.869269949
[2025-02-21 05:09:25] 2025-02-21 10:09:07,938 | INFO     | -- intersect: -7140295316.637588
[2025-02-21 05:09:25] 2025-02-21 10:09:07,938 | INFO     | intersect: -7140295316.637588
[2025-02-21 05:09:25] 2025-02-21 10:09:07,939 | INFO     | chi2: 9.553601150418478
[2025-02-21 05:09:25] 2025-02-21 10:09:07,940 | INFO     | current chi2=9.553601150418478 (change=14.079312470760993 %)
[2025-02-21 05:09:25] 2025-02-21 10:09:07,940 | INFO     | right removable region: 1177
[2025-02-21 05:09:25] 2025-02-21 10:09:07,941 | INFO     | model: linear, x: [1740060670.0, 1740060731.0, 1740060792.0, 1740060854.0, 1740060915.0, 1740060975.0, 1740061037.0, 1740061097.0, 1740061158.0, 1740061219.0, 1740
[2025-02-21 05:09:25] 2025-02-21 10:09:07,946 | INFO     | sum of square deviations: 506890296971.3373
[2025-02-21 05:09:25] 2025-02-21 10:09:08,017 | INFO     | sum of deviations: 1522130706686.786
[2025-02-21 05:09:25] 2025-02-21 10:09:08,021 | INFO     | mean x: 1740096569.5314093
[2025-02-21 05:09:25] 2025-02-21 10:09:08,022 | INFO     | mean y: 2622554.140916808
[2025-02-21 05:09:25] 2025-02-21 10:09:08,022 | INFO     | -- intersect: -5222678535.482953
[2025-02-21 05:09:25] 2025-02-21 10:09:08,022 | INFO     | intersect: -5222678535.482953
[2025-02-21 05:09:25] 2025-02-21 10:09:08,024 | INFO     | chi2: 7.38616488102971
[2025-02-21 05:09:25] 2025-02-21 10:09:08,024 | INFO     | current chi2=7.38616488102971 (change=33.57223576843651 %)
[2025-02-21 05:09:25] 2025-02-21 10:09:08,025 | INFO     | model: linear, x: [1740060975.0, 1740061037.0, 1740061097.0, 1740061158.0, 1740061219.0, 1740061280.0, 1740061342.0, 1740061402.0, 1740061463.0, 1740061526.0, 1740
[2025-02-21 05:09:25] 2025-02-21 10:09:08,026 | INFO     | sum of square deviations: 500462963190.63495
[2025-02-21 05:09:25] 2025-02-21 10:09:08,108 | INFO     | sum of deviations: 1234879811074.2148
[2025-02-21 05:09:25] 2025-02-21 10:09:08,109 | INFO     | mean x: 1740096722.0341005
[2025-02-21 05:09:25] 2025-02-21 10:09:08,109 | INFO     | mean y: 2629369.2446717815
[2025-02-21 05:09:25] 2025-02-21 10:09:08,109 | INFO     | -- intersect: -4291015654.26891
[2025-02-21 05:09:25] 2025-02-21 10:09:08,109 | INFO     | intersect: -4291015654.26891
[2025-02-21 05:09:25] 2025-02-21 10:09:08,115 | INFO     | chi2: 5.5455577324789145
[2025-02-21 05:09:25] 2025-02-21 10:09:08,115 | INFO     | current chi2=5.5455577324789145 (change=24.91965963660149 %)
[2025-02-21 05:09:25] 2025-02-21 10:09:08,115 | INFO     | left removable region: 20
[2025-02-21 05:09:25] 2025-02-21 10:09:08,116 | INFO     | model: linear, x: [1740061586.0, 1740061646.0, 1740061707.0, 1740061769.0, 1740061829.0, 1740061890.0, 1740061952.0, 1740062012.0, 1740062074.0, 1740062134.0, 1740
[2025-02-21 05:09:25] 2025-02-21 10:09:08,117 | INFO     | sum of square deviations: 480261630752.75183
[2025-02-21 05:09:25] 2025-02-21 10:09:08,188 | INFO     | sum of deviations: 908069700992.9495
[2025-02-21 05:09:25] 2025-02-21 10:09:08,188 | INFO     | mean x: 1740096844.0440795
[2025-02-21 05:09:25] 2025-02-21 10:09:08,189 | INFO     | mean y: 2645065.8245462403
[2025-02-21 05:09:25] 2025-02-21 10:09:08,189 | INFO     | -- intersect: -3287497472.510697
[2025-02-21 05:09:25] 2025-02-21 10:09:08,189 | INFO     | intersect: -3287497472.510697
[2025-02-21 05:09:25] 2025-02-21 10:09:08,190 | INFO     | chi2: 1.2696679252286354
[2025-02-21 05:09:25] 2025-02-21 10:09:08,191 | INFO     | -- intersect: -3287497472.510697
[2025-02-21 05:09:25] 2025-02-21 10:09:08,191 | INFO     | current memory leak: 1.89 B/s (using 1157 data points, chi2=1.27)
[2025-02-21 05:09:25] 2025-02-21 10:09:08,192 | INFO     | ..............................
[2025-02-21 05:09:25] 2025-02-21 10:09:08,192 | INFO     | . Timing measurements:
[2025-02-21 05:09:25] 2025-02-21 10:09:08,192 | INFO     | . get job = 2 s
[2025-02-21 05:09:25] 2025-02-21 10:09:08,192 | INFO     | . initial setup = 12 s
[2025-02-21 05:09:25] 2025-02-21 10:09:08,193 | INFO     | . payload setup = 82 s
[2025-02-21 05:09:25] 2025-02-21 10:09:08,193 | INFO     | . stage-in = 0 s
[2025-02-21 05:09:25] 2025-02-21 10:09:08,193 | INFO     | . payload execution = 72232 s
[2025-02-21 05:09:25] 2025-02-21 10:09:08,193 | INFO     | . stage-out = 6 s
[2025-02-21 05:09:25] 2025-02-21 10:09:08,193 | INFO     | . log creation = 1 s
[2025-02-21 05:09:25] 2025-02-21 10:09:08,193 | INFO     | ..............................
[2025-02-21 05:09:25] 2025-02-21 10:09:08,354 | INFO     | 
[2025-02-21 05:09:25] 2025-02-21 10:09:08,354 | INFO     | job summary report
[2025-02-21 05:09:25] 2025-02-21 10:09:08,355 | INFO     | --------------------------------------------------
[2025-02-21 05:09:25] 2025-02-21 10:09:08,355 | INFO     | PanDA job id: 6520505151
[2025-02-21 05:09:25] 2025-02-21 10:09:08,355 | INFO     | task id: 43205094
[2025-02-21 05:09:25] 2025-02-21 10:09:08,355 | INFO     | errors: (none)
[2025-02-21 05:09:25] 2025-02-21 10:09:08,355 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-21 05:09:25] 2025-02-21 10:09:08,355 | INFO     | pilot state: finished 
[2025-02-21 05:09:25] 2025-02-21 10:09:08,355 | INFO     | transexitcode: 0
[2025-02-21 05:09:25] 2025-02-21 10:09:08,355 | INFO     | exeerrorcode: 0
[2025-02-21 05:09:25] 2025-02-21 10:09:08,355 | INFO     | exeerrordiag: 
[2025-02-21 05:09:25] 2025-02-21 10:09:08,355 | INFO     | exitcode: 0
[2025-02-21 05:09:25] 2025-02-21 10:09:08,355 | INFO     | exitmsg: OK
[2025-02-21 05:09:25] 2025-02-21 10:09:08,355 | INFO     | cpuconsumptiontime: 117873 s
[2025-02-21 05:09:25] 2025-02-21 10:09:08,355 | INFO     | nevents: 400
[2025-02-21 05:09:25] 2025-02-21 10:09:08,356 | INFO     | neventsw: 0
[2025-02-21 05:09:25] 2025-02-21 10:09:08,356 | INFO     | pid: 10708
[2025-02-21 05:09:25] 2025-02-21 10:09:08,356 | INFO     | pgrp: 10708
[2025-02-21 05:09:25] 2025-02-21 10:09:08,356 | INFO     | corecount: 10
[2025-02-21 05:09:25] 2025-02-21 10:09:08,356 | INFO     | event service: False
[2025-02-21 05:09:25] 2025-02-21 10:09:08,356 | INFO     | sizes: {0: 2388489, 1: 2389090, 2: 2389202, 3: 2389202, 4: 2389401, 15: 2389401, 27: 2389557, 38: 2389585, 46: 2389819, 48: 2389847, 72318: 2445816, 72319: 2446095
[2025-02-21 05:09:25] 2025-02-21 10:09:08,356 | INFO     | --------------------------------------------------
[2025-02-21 05:09:25] 2025-02-21 10:09:08,356 | INFO     | 
[2025-02-21 05:09:25] 2025-02-21 10:09:08,356 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-21 05:09:25] 2025-02-21 10:09:08,606 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-21 05:09:25] 2025-02-21 10:09:08,620 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-21 05:09:25] 2025-02-21 10:09:08,620 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-21 05:09:25] 2025-02-21 10:09:08,620 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-21 05:09:25] 2025-02-21 10:09:08,620 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-21 05:09:25] 2025-02-21 10:09:08,620 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-21 05:09:25] 2025-02-21 10:09:08,621 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-21 05:09:25] 2025-02-21 10:09:08,621 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-21 05:09:25] 2025-02-21 10:09:08,621 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-21 05:09:25] 2025-02-21 10:09:08,621 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-21 05:09:25] 2025-02-21 10:09:08,621 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-21 05:09:25] 2025-02-21 10:09:08,621 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-21 05:09:25] 2025-02-21 10:09:08,636 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-21 05:09:25] 2025-02-21 10:09:08,636 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-21 05:09:25] 2025-02-21 10:09:08,636 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-21 05:09:25] 2025-02-21 10:09:08,636 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-21 05:09:25] 2025-02-21 10:09:08,636 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-21 05:09:25] 2025-02-21 10:09:08,651 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-21 05:09:25] 2025-02-21 10:09:08,651 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-21 05:09:25] 2025-02-21 10:09:08,651 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-21 05:09:25] 2025-02-21 10:09:08,651 | INFO     | job 6520505151 has completed (purged errors)
[2025-02-21 05:09:25] 2025-02-21 10:09:08,651 | INFO     | overall cleanup function is called
[2025-02-21 05:09:25] 2025-02-21 10:09:09,682 | INFO     | --- collectZombieJob: --- 10, [10708]
[2025-02-21 05:09:25] 2025-02-21 10:09:09,683 | INFO     | zombie collector waiting for pid 10708
[2025-02-21 05:09:25] 2025-02-21 10:09:09,683 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-21 05:09:25] 2025-02-21 10:09:09,683 | INFO     | collected zombie processes
[2025-02-21 05:09:25] 2025-02-21 10:09:09,683 | INFO     | will attempt to kill all subprocesses of pid=10708
[2025-02-21 05:09:25] 2025-02-21 10:09:09,888 | INFO     | process IDs to be killed: [10708] (in reverse order)
[2025-02-21 05:09:25] 2025-02-21 10:09:09,986 | WARNING  | found no corresponding commands to process id(s)
[2025-02-21 05:09:25] 2025-02-21 10:09:09,987 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-21 05:09:25] 2025-02-21 10:09:09,998 | INFO     | did not find any defunct processes belonging to 10708
[2025-02-21 05:09:25] 2025-02-21 10:09:10,008 | INFO     | did not find any defunct processes belonging to 10708
[2025-02-21 05:09:25] 2025-02-21 10:09:10,008 | INFO     | ready for new job
[2025-02-21 05:09:25] 2025-02-21 10:09:10,008 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-21 05:09:25] 2025-02-21 10:09:10,015 | INFO     | **************************************
[2025-02-21 05:09:25] 2025-02-21 10:09:10,015 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-21 05:09:25] 2025-02-21 10:09:10,015 | INFO     | **************************************
[2025-02-21 05:09:25] 2025-02-21 10:09:10,016 | INFO     | 
[2025-02-21 05:09:25] 2025-02-21 10:09:10,019 | INFO     | architecture information:
[2025-02-21 05:09:25] 2025-02-21 10:09:10,020 | INFO     | executing command: cat /etc/os-release
[2025-02-21 05:09:25] 2025-02-21 10:09:10,114 | INFO     | cat /etc/os-release:
[2025-02-21 05:09:25] NAME="CentOS Linux"
[2025-02-21 05:09:25] VERSION="7 (Core)"
[2025-02-21 05:09:25] ID="centos"
[2025-02-21 05:09:25] ID_LIKE="rhel fedora"
[2025-02-21 05:09:25] VERSION_ID="7"
[2025-02-21 05:09:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-21 05:09:25] ANSI_COLOR="0;31"
[2025-02-21 05:09:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-21 05:09:25] HOME_URL="https://www.centos.org/"
[2025-02-21 05:09:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-21 05:09:25] 
[2025-02-21 05:09:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-21 05:09:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-21 05:09:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-21 05:09:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-21 05:09:25] 
[2025-02-21 05:09:25] 2025-02-21 10:09:10,115 | INFO     | **************************************
[2025-02-21 05:09:25] 2025-02-21 10:09:10,619 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-21 05:09:25] 2025-02-21 10:09:10,721 | INFO     | sufficient remaining disk space (56450088960 B)
[2025-02-21 05:09:25] 2025-02-21 10:09:10,722 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-21 05:09:25] 2025-02-21 10:09:10,722 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-21 05:09:25] 2025-02-21 10:09:10,722 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-21 05:09:25] 2025-02-21 10:09:10,722 | INFO     | found 0 job(s) in 20 queues
[2025-02-21 05:09:25] 2025-02-21 10:09:10,723 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-21 05:09:25] 2025-02-21 10:09:10,723 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-21 05:09:25] 2025-02-21 10:09:10,742 | INFO     | all job control threads have been joined
[2025-02-21 05:09:25] 2025-02-21 10:09:11,109 | INFO     | all data control threads have been joined
[2025-02-21 05:09:25] 2025-02-21 10:09:11,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-21 05:09:25] 2025-02-21 10:09:11,160 | INFO     | aborting loop
[2025-02-21 05:09:25] 2025-02-21 10:09:11,189 | INFO     | all payload control threads have been joined
[2025-02-21 05:09:25] 2025-02-21 10:09:11,727 | INFO     | [job] retrieve thread has finished
[2025-02-21 05:09:25] 2025-02-21 10:09:11,748 | INFO     | [job] control thread has finished
[2025-02-21 05:09:25] 2025-02-21 10:09:11,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-21 05:09:25] 2025-02-21 10:09:12,114 | INFO     | [data] control thread has finished
[2025-02-21 05:09:25] 2025-02-21 10:09:12,165 | INFO     | [job] job monitor thread has finished
[2025-02-21 05:09:25] 2025-02-21 10:09:12,194 | INFO     | [payload] validate_post thread has finished
[2025-02-21 05:09:25] 2025-02-21 10:09:12,195 | INFO     | [payload] control thread has finished
[2025-02-21 05:09:25] 2025-02-21 10:09:12,245 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-21 05:09:25] 2025-02-21 10:09:12,301 | INFO     | [data] copytool_in thread has finished
[2025-02-21 05:09:25] 2025-02-21 10:09:12,430 | INFO     | [job] validate thread has finished
[2025-02-21 05:09:25] 2025-02-21 10:09:12,504 | INFO     | [job] create_data_payload thread has finished
[2025-02-21 05:09:25] 2025-02-21 10:09:13,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-21 05:09:25] 2025-02-21 10:09:13,129 | INFO     | [payload] failed_post thread has finished
[2025-02-21 05:09:25] 2025-02-21 10:09:13,174 | INFO     | [payload] validate_pre thread has finished
[2025-02-21 05:09:25] 2025-02-21 10:09:13,178 | INFO     | [payload] execute_payloads thread has finished
[2025-02-21 05:09:25] 2025-02-21 10:09:13,368 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-21 05:09:25] 2025-02-21 10:09:13,969 | INFO     | [data] copytool_out thread has finished
[2025-02-21 05:09:25] 2025-02-21 10:09:14,374 | INFO     | [job] queue monitor thread has finished
[2025-02-21 05:09:25] 2025-02-21 10:09:17,036 | INFO     | [data] queue_monitor thread has finished
[2025-02-21 05:09:25] 2025-02-21 10:09:17,542 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140441054852928)>', '<ExcThread(monitor, started 140440749709056)>']
[2025-02-21 05:09:25] 2025-02-21 10:09:17,763 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-21 05:09:25] 2025-02-21 10:09:17,764 | INFO     | [monitor] control thread has ended
[2025-02-21 05:09:25] 2025-02-21 10:09:22,568 | INFO     | all workflow threads have been joined
[2025-02-21 05:09:25] 2025-02-21 10:09:22,569 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-21 05:09:25] 2025-02-21 10:09:22,572 | INFO     | traces error code: 0
[2025-02-21 05:09:25] 2025-02-21 10:09:22,573 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-21 05:09:25] 2025-02-21 10:09:22,789 [wrapper] ==== pilot stdout END ====
[2025-02-21 05:09:25] 2025-02-21 10:09:22,821 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-21 05:09:25] 2025-02-21 10:09:22,857 [wrapper] pilotpid: 38918
[2025-02-21 05:09:25] 2025-02-21 10:09:22,896 [wrapper] Pilot exit status: 0
[2025-02-21 05:09:25] 2025-02-21 10:09:23,177 [wrapper] pandaids: 6520505151
[2025-02-21 05:09:25] 2025-02-21 10:09:23,930 [wrapper] cleanup supervisor_pilot 20203 38919
[2025-02-21 05:09:25] 2025-02-21 10:09:23,936 [wrapper] Test setup, not cleaning
[2025-02-21 05:09:25] 2025-02-21 10:09:23,983 [wrapper] apfmon messages muted
[2025-02-21 05:09:25] 2025-02-21 10:09:23,994 [wrapper] ==== wrapper stdout END ====
[2025-02-21 05:09:25] 2025-02-21 10:09:24,007 [wrapper] ==== wrapper stderr END ====
[2025-02-21 05:09:25]  *** Error codes and diagnostics ***
[2025-02-21 05:09:25]     "exeErrorCode": 0,
[2025-02-21 05:09:25]     "exeErrorDiag": "",
[2025-02-21 05:09:25]     "pilotErrorCode": 0,
[2025-02-21 05:09:25]     "pilotErrorDiag": "",
[2025-02-21 05:09:25]  *** Listing of results directory ***
[2025-02-21 05:09:25] total 690592
[2025-02-21 05:09:25] -rw-r--r-- 1 boincer umatlas    491065 Feb 20 05:40 pilot3.tar.gz
[2025-02-21 05:09:25] -rw-r--r-- 1 boincer umatlas      5118 Feb 20 05:42 queuedata.json
[2025-02-21 05:09:25] -rwx------ 1 boincer umatlas     35865 Feb 20 05:43 runpilot2-wrapper.sh
[2025-02-21 05:09:25] -rw-r--r-- 1 boincer umatlas       100 Feb 20 08:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-21 05:09:25] -rwxr-xr-x 1 boincer umatlas      7986 Feb 20 08:57 run_atlas
[2025-02-21 05:09:25] -rw-r--r-- 1 boincer umatlas       105 Feb 20 08:57 job.xml
[2025-02-21 05:09:25] -rw-r--r-- 2 boincer umatlas 343347979 Feb 20 08:58 EVNT.43092757._001808.pool.root.1
[2025-02-21 05:09:25] -rw-r--r-- 2 boincer umatlas     17569 Feb 20 08:58 start_atlas.sh
[2025-02-21 05:09:25] drwxrwx--x 2 boincer umatlas      4096 Feb 20 08:58 shared
[2025-02-21 05:09:25] -rw-r--r-- 2 boincer umatlas    503555 Feb 20 08:58 input.tar.gz
[2025-02-21 05:09:25] -rw-r--r-- 1 boincer umatlas         0 Feb 20 08:58 boinc_lockfile
[2025-02-21 05:09:25] -rw-r--r-- 1 boincer umatlas      2547 Feb 20 08:58 pandaJob.out
[2025-02-21 05:09:25] -rw------- 1 boincer umatlas       467 Feb 20 08:59 setup.sh.local
[2025-02-21 05:09:25] -rw------- 1 boincer umatlas    987470 Feb 20 09:01 agis_schedconf.cvmfs.json
[2025-02-21 05:09:25] drwx------ 4 boincer umatlas      4096 Feb 20 09:01 pilot3
[2025-02-21 05:09:25] -rw-r--r-- 1 boincer umatlas      6229 Feb 21 05:04 init_data.xml
[2025-02-21 05:09:25] -rw------- 1 boincer umatlas 331810736 Feb 21 05:06 HITS.43205094._026146.pool.root.1
[2025-02-21 05:09:25] -rw-r--r-- 1 boincer umatlas       533 Feb 21 05:06 boinc_task_state.xml
[2025-02-21 05:09:25] -rw------- 1 boincer umatlas      1071 Feb 21 05:08 memory_monitor_summary.json
[2025-02-21 05:09:25] -rw------- 1 boincer umatlas        95 Feb 21 05:08 pilot_heartbeat.json
[2025-02-21 05:09:25] -rw------- 1 boincer umatlas   1582569 Feb 21 05:08 agis_ddmendpoints.agis.ALL.json
[2025-02-21 05:09:25] -rw------- 1 boincer umatlas   1219830 Feb 21 05:08 log.43205094._026146.job.log.tgz.1
[2025-02-21 05:09:25] -rw-r--r-- 1 boincer umatlas        29 Feb 21 05:09 wrapper_checkpoint.txt
[2025-02-21 05:09:25] -rw-r--r-- 1 boincer umatlas      8192 Feb 21 05:09 boinc_mmap_file
[2025-02-21 05:09:25] -rw------- 1 boincer umatlas      7774 Feb 21 05:09 heartbeat.json
[2025-02-21 05:09:25] -rw------- 1 boincer umatlas      4338 Feb 21 05:09 pilotlog.txt
[2025-02-21 05:09:25] -rw------- 1 boincer umatlas  12879647 Feb 21 05:09 log.43205094._026146.job.log.1
[2025-02-21 05:09:25] -rw------- 1 boincer umatlas       357 Feb 21 05:09 output.list
[2025-02-21 05:09:25] -rw-r--r-- 1 boincer umatlas       620 Feb 21 05:09 runtime_log
[2025-02-21 05:09:25] -rw------- 1 boincer umatlas  14120960 Feb 21 05:09 result.tar.gz
[2025-02-21 05:09:25] -rw-r--r-- 1 boincer umatlas     11416 Feb 21 05:09 runtime_log.err
[2025-02-21 05:09:25] -rw------- 1 boincer umatlas       665 Feb 21 05:09 Al9LDmbCJ56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmXmbKDmsFde7n.diag
[2025-02-21 05:09:25] -rw-r--r-- 1 boincer umatlas     21810 Feb 21 05:09 stderr.txt
[2025-02-21 05:09:25] HITS file was successfully produced:
[2025-02-21 05:09:25] -rw------- 1 boincer umatlas 331810736 Feb 21 05:06 shared/HITS.pool.root.1
[2025-02-21 05:09:25]  *** Contents of shared directory: ***
[2025-02-21 05:09:25] total 673648
[2025-02-21 05:09:25] -rw-r--r-- 2 boincer umatlas 343347979 Feb 20 08:58 ATLAS.root_0
[2025-02-21 05:09:25] -rw-r--r-- 2 boincer umatlas     17569 Feb 20 08:58 start_atlas.sh
[2025-02-21 05:09:25] -rw-r--r-- 2 boincer umatlas    503555 Feb 20 08:58 input.tar.gz
[2025-02-21 05:09:25] -rw------- 1 boincer umatlas 331810736 Feb 21 05:06 HITS.pool.root.1
[2025-02-21 05:09:25] -rw------- 1 boincer umatlas  14120960 Feb 21 05:09 result.tar.gz
05:09:26 (30563): run_atlas exited; CPU time 117608.990574
05:09:26 (30563): called boinc_finish(0)

</stderr_txt>
]]>

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