Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:40:03 (1232476): wrapper (7.7.26015): starting
04:40:03 (1232476): wrapper: running run_atlas (--nthreads 4)
[2025-02-24 04:40:03] Arguments: --nthreads 4
[2025-02-24 04:40:03] Threads: 4
[2025-02-24 04:40:03] Checking for CVMFS
[2025-02-24 04:40:03] No cvmfs_config command found, will try listing directly
[2025-02-24 04:40:03] CVMFS is ok
[2025-02-24 04:40:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-24 04:40:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-24 04:40:03] Further information can be found at the LHC@home message board.
[2025-02-24 04:40:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-24 04:40:03] Checking for apptainer binary...
[2025-02-24 04:40:03] which: no apptainer in ((null))
[2025-02-24 04:40:03] apptainer is not installed, using version from CVMFS
[2025-02-24 04:40:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-24 04:40:03] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2025-02-24 04:40:03] apptainer works
[2025-02-24 04:40:03] Set ATHENA_PROC_NUMBER=4
[2025-02-24 04:40:03] Set ATHENA_CORE_NUMBER=4
[2025-02-24 04:40:03] Starting ATLAS job with PandaID=6520504309
[2025-02-24 04:40:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-24 13:37:29]  *** The last 200 lines of the pilot log: ***
[2025-02-24 13:37:29] 2025-02-24 12:13:23,783 | INFO     | sum of deviations: 80566300097.99997
[2025-02-24 13:37:29] 2025-02-24 12:13:23,783 | INFO     | mean x: 1740383811.0
[2025-02-24 13:37:29] 2025-02-24 12:13:23,784 | INFO     | mean y: 2367839.192079208
[2025-02-24 13:37:29] 2025-02-24 12:13:23,784 | INFO     | -- intersect: -3508767735.9672956
[2025-02-24 13:37:29] 2025-02-24 12:13:23,784 | INFO     | intersect: -3508767735.9672956
[2025-02-24 13:37:29] 2025-02-24 12:13:23,785 | INFO     | chi2: 4.1011275684938875
[2025-02-24 13:37:29] 2025-02-24 12:13:23,785 | INFO     | model: linear, x: [1740368439.0, 1740368500.0, 1740368561.0, 1740368622.0, 1740368683.0, 1740368744.0, 1740368805.0, 1740368866.0, 1740368927.0, 1740368988.0, 1740
[2025-02-24 13:37:29] 2025-02-24 12:13:23,786 | INFO     | sum of square deviations: 38760261625.0
[2025-02-24 13:37:29] 2025-02-24 12:13:23,793 | INFO     | sum of deviations: 109101771338.49973
[2025-02-24 13:37:29] 2025-02-24 12:13:23,794 | INFO     | mean x: 1740383658.5
[2025-02-24 13:37:29] 2025-02-24 12:13:23,794 | INFO     | mean y: 2371513.546
[2025-02-24 13:37:29] 2025-02-24 12:13:23,794 | INFO     | -- intersect: -4896432880.19056
[2025-02-24 13:37:29] 2025-02-24 12:13:23,794 | INFO     | intersect: -4896432880.19056
[2025-02-24 13:37:29] 2025-02-24 12:13:23,795 | INFO     | chi2: 3.449123890370872
[2025-02-24 13:37:29] 2025-02-24 12:13:23,795 | INFO     | current chi2=3.449123890370872 (change=15.898156476084935 %)
[2025-02-24 13:37:29] 2025-02-24 12:13:23,795 | INFO     | right removable region: 499
[2025-02-24 13:37:29] 2025-02-24 12:13:23,796 | INFO     | model: linear, x: [1740368744.0, 1740368805.0, 1740368866.0, 1740368927.0, 1740368988.0, 1740369049.0, 1740369110.0, 1740369171.0, 1740369232.0, 1740369293.0, 1740
[2025-02-24 13:37:29] 2025-02-24 12:13:23,796 | INFO     | sum of square deviations: 38760261625.0
[2025-02-24 13:37:29] 2025-02-24 12:13:23,803 | INFO     | sum of deviations: -27694111416.499977
[2025-02-24 13:37:29] 2025-02-24 12:13:23,803 | INFO     | mean x: 1740383963.5
[2025-02-24 13:37:29] 2025-02-24 12:13:23,804 | INFO     | mean y: 2381872.046
[2025-02-24 13:37:29] 2025-02-24 12:13:23,804 | INFO     | -- intersect: 1245881925.2440755
[2025-02-24 13:37:29] 2025-02-24 12:13:23,804 | INFO     | intersect: 1245881925.2440755
[2025-02-24 13:37:29] 2025-02-24 12:13:23,805 | INFO     | chi2: 2.0285538108205983
[2025-02-24 13:37:29] 2025-02-24 12:13:23,805 | INFO     | current chi2=2.0285538108205983 (change=50.53668102390749 %)
[2025-02-24 13:37:29] 2025-02-24 12:13:23,806 | INFO     | model: linear, x: [1740369049.0, 1740369110.0, 1740369171.0, 1740369232.0, 1740369293.0, 1740369354.0, 1740369415.0, 1740369476.0, 1740369537.0, 1740369598.0, 1740
[2025-02-24 13:37:29] 2025-02-24 12:13:23,806 | INFO     | sum of square deviations: 37609040040.0
[2025-02-24 13:37:29] 2025-02-24 12:13:23,812 | INFO     | sum of deviations: -101276279130.99998
[2025-02-24 13:37:29] 2025-02-24 12:13:23,813 | INFO     | mean x: 1740384116.0
[2025-02-24 13:37:29] 2025-02-24 12:13:23,813 | INFO     | mean y: 2391618.9858585857
[2025-02-24 13:37:29] 2025-02-24 12:13:23,813 | INFO     | -- intersect: 4689020879.92178
[2025-02-24 13:37:29] 2025-02-24 12:13:23,813 | INFO     | intersect: 4689020879.92178
[2025-02-24 13:37:29] 2025-02-24 12:13:23,814 | INFO     | chi2: 1.159545565218545
[2025-02-24 13:37:29] 2025-02-24 12:13:23,814 | INFO     | current chi2=1.159545565218545 (change=42.838806689112126 %)
[2025-02-24 13:37:29] 2025-02-24 12:13:23,815 | INFO     | model: linear, x: [1740369354.0, 1740369415.0, 1740369476.0, 1740369537.0, 1740369598.0, 1740369659.0, 1740369720.0, 1740369781.0, 1740369842.0, 1740369903.0, 1740
[2025-02-24 13:37:29] 2025-02-24 12:13:23,816 | INFO     | sum of square deviations: 36480842142.5
[2025-02-24 13:37:29] 2025-02-24 12:13:23,823 | INFO     | sum of deviations: -106558247079.5
[2025-02-24 13:37:29] 2025-02-24 12:13:23,823 | INFO     | mean x: 1740384268.5
[2025-02-24 13:37:29] 2025-02-24 12:13:23,823 | INFO     | mean y: 2392319.1979591837
[2025-02-24 13:37:29] 2025-02-24 12:13:23,823 | INFO     | -- intersect: 5085945384.439478
[2025-02-24 13:37:29] 2025-02-24 12:13:23,823 | INFO     | intersect: 5085945384.439478
[2025-02-24 13:37:29] 2025-02-24 12:13:23,824 | INFO     | chi2: 1.097570915641486
[2025-02-24 13:37:29] 2025-02-24 12:13:23,824 | INFO     | current chi2=1.097570915641486 (change=5.344736027288273 %)
[2025-02-24 13:37:29] 2025-02-24 12:13:23,824 | INFO     | left removable region: 30
[2025-02-24 13:37:29] 2025-02-24 12:13:23,825 | INFO     | model: linear, x: [1740370269.0, 1740370330.0, 1740370391.0, 1740370452.0, 1740370513.0, 1740370574.0, 1740370635.0, 1740370696.0, 1740370757.0, 1740370818.0, 1740
[2025-02-24 13:37:29] 2025-02-24 12:13:23,825 | INFO     | sum of square deviations: 31988581170.0
[2025-02-24 13:37:29] 2025-02-24 12:13:23,831 | INFO     | sum of deviations: -9877449765.999989
[2025-02-24 13:37:29] 2025-02-24 12:13:23,832 | INFO     | mean x: 1740384543.0
[2025-02-24 13:37:29] 2025-02-24 12:13:23,832 | INFO     | mean y: 2386650.481876333
[2025-02-24 13:37:29] 2025-02-24 12:13:23,832 | INFO     | -- intersect: 539783442.3448194
[2025-02-24 13:37:29] 2025-02-24 12:13:23,832 | INFO     | intersect: 539783442.3448194
[2025-02-24 13:37:29] 2025-02-24 12:13:23,833 | INFO     | chi2: 0.2107297527754387
[2025-02-24 13:37:29] 2025-02-24 12:13:23,833 | INFO     | -- intersect: 539783442.3448194
[2025-02-24 13:37:29] 2025-02-24 12:13:23,833 | INFO     | current memory leak: -0.31 B/s (using 469 data points, chi2=0.21)
[2025-02-24 13:37:29] 2025-02-24 12:13:23,834 | INFO     | ..............................
[2025-02-24 13:37:29] 2025-02-24 12:13:23,834 | INFO     | . Timing measurements:
[2025-02-24 13:37:29] 2025-02-24 12:13:23,834 | INFO     | . get job = 0 s
[2025-02-24 13:37:29] 2025-02-24 12:13:23,835 | INFO     | . initial setup = 1 s
[2025-02-24 13:37:29] 2025-02-24 12:13:23,835 | INFO     | . payload setup = 5 s
[2025-02-24 13:37:29] 2025-02-24 12:13:23,835 | INFO     | . stage-in = 0 s
[2025-02-24 13:37:29] 2025-02-24 12:13:23,835 | INFO     | . payload execution = 30759 s
[2025-02-24 13:37:29] 2025-02-24 12:13:23,835 | INFO     | . stage-out = 1 s
[2025-02-24 13:37:29] 2025-02-24 12:13:23,835 | INFO     | . log creation = 0 s
[2025-02-24 13:37:29] 2025-02-24 12:13:23,835 | INFO     | ..............................
[2025-02-24 13:37:29] 2025-02-24 12:13:23,943 | INFO     | 
[2025-02-24 13:37:29] 2025-02-24 12:13:23,944 | INFO     | job summary report
[2025-02-24 13:37:29] 2025-02-24 12:13:23,944 | INFO     | --------------------------------------------------
[2025-02-24 13:37:29] 2025-02-24 12:13:23,944 | INFO     | PanDA job id: 6520504309
[2025-02-24 13:37:29] 2025-02-24 12:13:23,944 | INFO     | task id: 43205094
[2025-02-24 13:37:29] 2025-02-24 12:13:23,944 | INFO     | errors: (none)
[2025-02-24 13:37:29] 2025-02-24 12:13:23,944 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-24 13:37:29] 2025-02-24 12:13:23,945 | INFO     | pilot state: finished 
[2025-02-24 13:37:29] 2025-02-24 12:13:23,945 | INFO     | transexitcode: 0
[2025-02-24 13:37:29] 2025-02-24 12:13:23,945 | INFO     | exeerrorcode: 0
[2025-02-24 13:37:29] 2025-02-24 12:13:23,945 | INFO     | exeerrordiag: 
[2025-02-24 13:37:29] 2025-02-24 12:13:23,945 | INFO     | exitcode: 0
[2025-02-24 13:37:29] 2025-02-24 12:13:23,945 | INFO     | exitmsg: OK
[2025-02-24 13:37:29] 2025-02-24 12:13:23,945 | INFO     | cpuconsumptiontime: 117353 s
[2025-02-24 13:37:29] 2025-02-24 12:13:23,946 | INFO     | nevents: 400
[2025-02-24 13:37:29] 2025-02-24 12:13:23,946 | INFO     | neventsw: 0
[2025-02-24 13:37:29] 2025-02-24 12:13:23,946 | INFO     | pid: 1245225
[2025-02-24 13:37:29] 2025-02-24 12:13:23,946 | INFO     | pgrp: 1245225
[2025-02-24 13:37:29] 2025-02-24 12:13:23,946 | INFO     | corecount: 4
[2025-02-24 13:37:29] 2025-02-24 12:13:23,946 | INFO     | event service: False
[2025-02-24 13:37:29] 2025-02-24 12:13:23,946 | INFO     | sizes: {0: 2383200, 1: 2383399, 5: 2383605, 12: 2383661, 30768: 2421595, 30769: 2421594, 30772: 2430797, 30776: 2430911}
[2025-02-24 13:37:29] 2025-02-24 12:13:23,946 | INFO     | --------------------------------------------------
[2025-02-24 13:37:29] 2025-02-24 12:13:23,947 | INFO     | 
[2025-02-24 13:37:29] 2025-02-24 12:13:23,947 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2025-02-24 13:37:29] 2025-02-24 12:13:23,966 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-24 13:37:29] 2025-02-24 12:13:23,967 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-24 13:37:29] 2025-02-24 12:13:23,967 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-24 13:37:29] 2025-02-24 12:13:23,967 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-24 13:37:29] 2025-02-24 12:13:23,967 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-24 13:37:29] 2025-02-24 12:13:23,968 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-24 13:37:29] 2025-02-24 12:13:23,968 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-24 13:37:29] 2025-02-24 12:13:23,968 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-24 13:37:29] 2025-02-24 12:13:23,968 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-24 13:37:29] 2025-02-24 12:13:23,968 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-24 13:37:29] 2025-02-24 12:13:23,968 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-24 13:37:29] 2025-02-24 12:13:23,968 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-24 13:37:29] 2025-02-24 12:13:23,969 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-24 13:37:29] 2025-02-24 12:13:23,969 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-24 13:37:29] 2025-02-24 12:13:23,969 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-24 13:37:29] 2025-02-24 12:13:23,969 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-24 13:37:29] 2025-02-24 12:13:23,969 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-24 13:37:29] 2025-02-24 12:13:23,969 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-24 13:37:29] 2025-02-24 12:13:23,970 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-24 13:37:29] 2025-02-24 12:13:23,970 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-24 13:37:29] 2025-02-24 12:13:23,970 | INFO     | job 6520504309 has completed (purged errors)
[2025-02-24 13:37:29] 2025-02-24 12:13:23,970 | INFO     | overall cleanup function is called
[2025-02-24 13:37:29] 2025-02-24 12:13:24,978 | INFO     | --- collectZombieJob: --- 10, [1245225]
[2025-02-24 13:37:29] 2025-02-24 12:13:24,978 | INFO     | zombie collector waiting for pid 1245225
[2025-02-24 13:37:29] 2025-02-24 12:13:24,978 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-24 13:37:29] 2025-02-24 12:13:24,979 | INFO     | collected zombie processes
[2025-02-24 13:37:29] 2025-02-24 12:13:24,979 | INFO     | will attempt to kill all subprocesses of pid=1245225
[2025-02-24 13:37:29] 2025-02-24 12:13:25,085 | INFO     | process IDs to be killed: [1245225] (in reverse order)
[2025-02-24 13:37:29] 2025-02-24 12:13:25,176 | WARNING  | found no corresponding commands to process id(s)
[2025-02-24 13:37:29] 2025-02-24 12:13:25,177 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-24 13:37:29] 2025-02-24 12:13:25,200 | INFO     | did not find any defunct processes belonging to 1245225
[2025-02-24 13:37:29] 2025-02-24 12:13:25,222 | INFO     | did not find any defunct processes belonging to 1245225
[2025-02-24 13:37:29] 2025-02-24 12:13:25,223 | INFO     | ready for new job
[2025-02-24 13:37:29] 2025-02-24 12:13:25,223 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-24 13:37:29] 2025-02-24 12:13:25,226 | INFO     | **************************************
[2025-02-24 13:37:29] 2025-02-24 12:13:25,226 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-24 13:37:29] 2025-02-24 12:13:25,227 | INFO     | **************************************
[2025-02-24 13:37:29] 2025-02-24 12:13:25,227 | INFO     | 
[2025-02-24 13:37:29] 2025-02-24 12:13:25,231 | INFO     | architecture information:
[2025-02-24 13:37:29] 2025-02-24 12:13:25,231 | INFO     | executing command: cat /etc/os-release
[2025-02-24 13:37:29] 2025-02-24 12:13:25,245 | INFO     | cat /etc/os-release:
[2025-02-24 13:37:29] NAME="CentOS Linux"
[2025-02-24 13:37:29] VERSION="7 (Core)"
[2025-02-24 13:37:29] ID="centos"
[2025-02-24 13:37:29] ID_LIKE="rhel fedora"
[2025-02-24 13:37:29] VERSION_ID="7"
[2025-02-24 13:37:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-24 13:37:29] ANSI_COLOR="0;31"
[2025-02-24 13:37:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-24 13:37:29] HOME_URL="https://www.centos.org/"
[2025-02-24 13:37:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-24 13:37:29] 
[2025-02-24 13:37:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-24 13:37:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-24 13:37:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-24 13:37:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-24 13:37:29] 
[2025-02-24 13:37:29] 2025-02-24 12:13:25,246 | INFO     | **************************************
[2025-02-24 13:37:29] 2025-02-24 12:13:25,296 | INFO     | PID=1238193 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-02-24 13:37:29] 2025-02-24 12:13:25,296 | INFO     | .. there are 5 such processes running
[2025-02-24 13:37:29] 2025-02-24 12:13:25,749 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2025-02-24 13:37:29] 2025-02-24 12:13:25,763 | INFO     | sufficient remaining disk space (1629029924864 B)
[2025-02-24 13:37:29] 2025-02-24 12:13:25,763 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-24 13:37:29] 2025-02-24 12:13:25,763 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-24 13:37:29] 2025-02-24 12:13:25,764 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-24 13:37:29] 2025-02-24 12:13:25,764 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-24 13:37:29] 2025-02-24 12:13:25,764 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-24 13:37:29] 2025-02-24 12:13:25,765 | INFO     | found 0 job(s) in 20 queues
[2025-02-24 13:37:29] 2025-02-24 12:13:25,765 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-24 13:37:29] 2025-02-24 12:13:25,765 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-24 13:37:29] 2025-02-24 12:13:25,801 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-24 13:37:29] 2025-02-24 12:13:25,802 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-24 13:37:29] 2025-02-24 12:13:25,802 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-24 13:37:29] 2025-02-24 12:13:25,802 | INFO     | will abort loop
[2025-02-24 13:37:29] 2025-02-24 12:13:25,836 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-24 13:37:29] 2025-02-24 12:13:25,899 | INFO     | all data control threads have been joined
[2025-02-24 13:37:29] 2025-02-24 12:13:26,447 | INFO     | all job control threads have been joined
[2025-02-24 13:37:29] 2025-02-24 12:13:26,769 | INFO     | [job] retrieve thread has finished
[2025-02-24 13:37:29] 2025-02-24 12:13:26,770 | INFO     | [job] queue monitor thread has finished
[2025-02-24 13:37:29] 2025-02-24 12:13:26,807 | INFO     | [job] job monitor thread has finished
[2025-02-24 13:37:29] 2025-02-24 12:13:26,903 | INFO     | [data] control thread has finished
[2025-02-24 13:37:29] 2025-02-24 12:13:27,036 | INFO     | all payload control threads have been joined
[2025-02-24 13:37:29] 2025-02-24 12:13:27,235 | INFO     | [payload] validate_pre thread has finished
[2025-02-24 13:37:29] 2025-02-24 12:13:27,452 | INFO     | [job] control thread has finished
[2025-02-24 13:37:29] 2025-02-24 12:13:27,511 | INFO     | [payload] validate_post thread has finished
[2025-02-24 13:37:29] 2025-02-24 12:13:27,518 | INFO     | [data] copytool_in thread has finished
[2025-02-24 13:37:29] 2025-02-24 12:13:27,519 | INFO     | [job] create_data_payload thread has finished
[2025-02-24 13:37:29] 2025-02-24 12:13:27,770 | INFO     | [data] copytool_out thread has finished
[2025-02-24 13:37:29] 2025-02-24 12:13:28,000 | INFO     | [job] validate thread has finished
[2025-02-24 13:37:29] 2025-02-24 12:13:28,041 | INFO     | [payload] control thread has finished
[2025-02-24 13:37:29] 2025-02-24 12:13:28,082 | INFO     | [payload] execute_payloads thread has finished
[2025-02-24 13:37:29] 2025-02-24 12:13:28,119 | INFO     | [payload] failed_post thread has finished
[2025-02-24 13:37:29] 2025-02-24 12:13:29,840 | INFO     | [data] queue_monitor thread has finished
[2025-02-24 13:37:29] 2025-02-24 12:13:36,711 | INFO     | job.realtimelogging is not enabled
[2025-02-24 13:37:29] 2025-02-24 12:13:37,717 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-24 13:37:29] 2025-02-24 12:13:38,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22385415415616)>', '<ExcThread(monitor, started 22385182869248)>']
[2025-02-24 13:37:29] 2025-02-24 12:13:38,827 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-24 13:37:29] 2025-02-24 12:13:38,827 | INFO     | [monitor] control thread has ended
[2025-02-24 13:37:29] 2025-02-24 12:13:43,822 | INFO     | all workflow threads have been joined
[2025-02-24 13:37:29] 2025-02-24 12:13:43,823 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-24 13:37:29] 2025-02-24 12:13:43,823 | INFO     | traces error code: 0
[2025-02-24 13:37:29] 2025-02-24 12:13:43,823 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-24 13:37:29] 2025-02-24 12:13:43,955 [wrapper] ==== pilot stdout END ====
[2025-02-24 13:37:29] 2025-02-24 12:13:43,958 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-24 13:37:29] 2025-02-24 12:13:43,960 [wrapper] pilotpid: 1238193
[2025-02-24 13:37:29] 2025-02-24 12:13:43,962 [wrapper] Pilot exit status: 0
[2025-02-24 13:37:29] 2025-02-24 12:13:43,971 [wrapper] pandaids: 6520504309
[2025-02-24 13:37:29] 2025-02-24 12:13:44,019 [wrapper] cleanup supervisor_pilot 1779389 1238194
[2025-02-24 13:37:29] 2025-02-24 12:13:44,021 [wrapper] Test setup, not cleaning
[2025-02-24 13:37:29] 2025-02-24 12:13:44,026 [wrapper] apfmon messages muted
[2025-02-24 13:37:29] 2025-02-24 12:13:44,028 [wrapper] ==== wrapper stdout END ====
[2025-02-24 13:37:29] 2025-02-24 12:13:44,030 [wrapper] ==== wrapper stderr END ====
[2025-02-24 13:37:29]  *** Error codes and diagnostics ***
[2025-02-24 13:37:29]     "exeErrorCode": 0,
[2025-02-24 13:37:29]     "exeErrorDiag": "",
[2025-02-24 13:37:29]     "pilotErrorCode": 0,
[2025-02-24 13:37:29]     "pilotErrorDiag": "",
[2025-02-24 13:37:29]  *** Listing of results directory ***
[2025-02-24 13:37:29] total 667280
[2025-02-24 13:37:29] -rw-r--r-- 1 boinc boinc    491065 Feb 20 10:58 pilot3.tar.gz
[2025-02-24 13:37:29] -rw-r--r-- 1 boinc boinc      5118 Feb 20 11:18 queuedata.json
[2025-02-24 13:37:29] -rwx------ 1 boinc boinc     35865 Feb 20 11:18 runpilot2-wrapper.sh
[2025-02-24 13:37:29] -rw-r--r-- 1 boinc boinc       100 Feb 24 04:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-24 13:37:29] -rwxr-xr-x 1 boinc boinc      7986 Feb 24 04:39 run_atlas
[2025-02-24 13:37:29] -rw-r--r-- 1 boinc boinc       105 Feb 24 04:39 job.xml
[2025-02-24 13:37:29] -rw-r--r-- 2 boinc boinc 345491431 Feb 24 04:40 EVNT.43092757._001798.pool.root.1
[2025-02-24 13:37:29] -rw-r--r-- 1 boinc boinc      6420 Feb 24 04:40 init_data.xml
[2025-02-24 13:37:29] drwxrwx--x 2 boinc boinc      4096 Feb 24 04:40 shared
[2025-02-24 13:37:29] -rw-r--r-- 2 boinc boinc    503556 Feb 24 04:40 input.tar.gz
[2025-02-24 13:37:29] -rw-r--r-- 2 boinc boinc     17569 Feb 24 04:40 start_atlas.sh
[2025-02-24 13:37:29] -rw-r--r-- 1 boinc boinc         0 Feb 24 04:40 boinc_lockfile
[2025-02-24 13:37:29] -rw-r--r-- 1 boinc boinc      2548 Feb 24 04:40 pandaJob.out
[2025-02-24 13:37:29] -rw------- 1 boinc boinc       424 Feb 24 04:40 setup.sh.local
[2025-02-24 13:37:29] -rw------- 1 boinc boinc    987712 Feb 24 04:40 agis_schedconf.cvmfs.json
[2025-02-24 13:37:29] drwx------ 4 boinc boinc      4096 Feb 24 04:40 pilot3
[2025-02-24 13:37:29] -rw------- 1 boinc boinc 325907525 Feb 24 13:12 HITS.43205094._025912.pool.root.1
[2025-02-24 13:37:29] -rw------- 1 boinc boinc        95 Feb 24 13:12 pilot_heartbeat.json
[2025-02-24 13:37:29] -rw-r--r-- 1 boinc boinc       531 Feb 24 13:12 boinc_task_state.xml
[2025-02-24 13:37:29] -rw------- 1 boinc boinc      1039 Feb 24 13:13 memory_monitor_summary.json
[2025-02-24 13:37:29] -rw------- 1 boinc boinc   1582569 Feb 24 13:13 agis_ddmendpoints.agis.ALL.json
[2025-02-24 13:37:29] -rw------- 1 boinc boinc    555786 Feb 24 13:13 log.43205094._025912.job.log.tgz.1
[2025-02-24 13:37:29] -rw------- 1 boinc boinc      7749 Feb 24 13:13 heartbeat.json
[2025-02-24 13:37:29] -rw------- 1 boinc boinc      5002 Feb 24 13:13 pilotlog.txt
[2025-02-24 13:37:29] -rw------- 1 boinc boinc   3488156 Feb 24 13:13 log.43205094._025912.job.log.1
[2025-02-24 13:37:29] -rw------- 1 boinc boinc       357 Feb 24 13:13 output.list
[2025-02-24 13:37:29] -rw-r--r-- 1 boinc boinc       620 Feb 24 13:13 runtime_log
[2025-02-24 13:37:29] -rw------- 1 boinc boinc   4065280 Feb 24 13:13 result.tar.gz
[2025-02-24 13:37:29] -rw-r--r-- 1 boinc boinc     11424 Feb 24 13:13 runtime_log.err
[2025-02-24 13:37:29] -rw------- 1 boinc boinc       667 Feb 24 13:13 drWNDmhoI56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmOzpKDmIP0Pym.diag
[2025-02-24 13:37:29] -rw-r--r-- 1 boinc boinc        28 Feb 24 13:37 wrapper_checkpoint.txt
[2025-02-24 13:37:29] -rw-r--r-- 1 boinc boinc      8192 Feb 24 13:37 boinc_mmap_file
[2025-02-24 13:37:29] -rw-r--r-- 1 boinc boinc     21360 Feb 24 13:37 stderr.txt
[2025-02-24 13:37:29] HITS file was successfully produced:
[2025-02-24 13:37:29] -rw------- 1 boinc boinc 325907525 Feb 24 13:12 shared/HITS.pool.root.1
[2025-02-24 13:37:29]  *** Contents of shared directory: ***
[2025-02-24 13:37:29] total 660156
[2025-02-24 13:37:29] -rw-r--r-- 2 boinc boinc 345491431 Feb 24 04:40 ATLAS.root_0
[2025-02-24 13:37:29] -rw-r--r-- 2 boinc boinc    503556 Feb 24 04:40 input.tar.gz
[2025-02-24 13:37:29] -rw-r--r-- 2 boinc boinc     17569 Feb 24 04:40 start_atlas.sh
[2025-02-24 13:37:29] -rw------- 1 boinc boinc 325907525 Feb 24 13:12 HITS.pool.root.1
[2025-02-24 13:37:29] -rw------- 1 boinc boinc   4065280 Feb 24 13:13 result.tar.gz
13:37:31 (1232476): run_atlas exited; CPU time 117493.333176
13:37:31 (1232476): called boinc_finish(0)

</stderr_txt>
]]>

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