Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:35:26 (1016291): wrapper (7.7.26015): starting
05:35:26 (1016291): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 05:35:26] Arguments: --nthreads 4
[2025-02-22 05:35:26] Threads: 4
[2025-02-22 05:35:26] Checking for CVMFS
[2025-02-22 05:35:26] No cvmfs_config command found, will try listing directly
[2025-02-22 05:35:26] CVMFS is ok
[2025-02-22 05:35:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 05:35:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 05:35:26] Further information can be found at the LHC@home message board.
[2025-02-22 05:35:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 05:35:26] Checking for apptainer binary...
[2025-02-22 05:35:26] which: no apptainer in ((null))
[2025-02-22 05:35:26] apptainer is not installed, using version from CVMFS
[2025-02-22 05:35:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 05:35:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-02-22 05:35:26] apptainer works
[2025-02-22 05:35:26] Set ATHENA_PROC_NUMBER=4
[2025-02-22 05:35:26] Set ATHENA_CORE_NUMBER=4
[2025-02-22 05:35:26] Starting ATLAS job with PandaID=6520504264
[2025-02-22 05:35:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
06:14:30 (1416962): wrapper (7.7.26015): starting
06:14:30 (1416962): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 06:14:30] Arguments: --nthreads 4
[2025-02-22 06:14:30] Threads: 4
[2025-02-22 06:14:30] This job has been restarted, cleaning up previous attempt
[2025-02-22 06:14:30] Checking for CVMFS
[2025-02-22 06:14:30] No cvmfs_config command found, will try listing directly
[2025-02-22 06:14:30] CVMFS is ok
[2025-02-22 06:14:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 06:14:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 06:14:30] Further information can be found at the LHC@home message board.
[2025-02-22 06:14:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 06:14:30] Checking for apptainer binary...
[2025-02-22 06:14:30] which: no apptainer in ((null))
[2025-02-22 06:14:30] apptainer is not installed, using version from CVMFS
[2025-02-22 06:14:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 06:14:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-02-22 06:14:30] apptainer works
[2025-02-22 06:14:30] Set ATHENA_PROC_NUMBER=4
[2025-02-22 06:14:30] Set ATHENA_CORE_NUMBER=4
[2025-02-22 06:14:30] Starting ATLAS job with PandaID=6520504264
[2025-02-22 06:14:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 11:49:23]  *** The last 200 lines of the pilot log: ***
[2025-02-22 11:49:23] 2025-02-22 10:49:07,190 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-22 11:49:23] 2025-02-22 10:49:07,190 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-22 11:49:23] 2025-02-22 10:49:07,195 | INFO     | fitting pss+swap vs Time
[2025-02-22 11:49:23] 2025-02-22 10:49:07,195 | INFO     | model: linear, x: [1740201313.0, 1740201374.0, 1740201435.0, 1740201496.0, 1740201557.0, 1740201618.0, 1740201679.0, 1740201740.0, 1740201801.0, 1740201862.0, 1740
[2025-02-22 11:49:23] 2025-02-22 10:49:07,196 | INFO     | sum of square deviations: 11042365180.0
[2025-02-22 11:49:23] 2025-02-22 10:49:07,198 | INFO     | sum of deviations: 147882116938.99994
[2025-02-22 11:49:23] 2025-02-22 10:49:07,198 | INFO     | mean x: 1740211317.0
[2025-02-22 11:49:23] 2025-02-22 10:49:07,198 | INFO     | mean y: 2321771.583586626
[2025-02-22 11:49:23] 2025-02-22 10:49:07,199 | INFO     | -- intersect: -23303023531.1847
[2025-02-22 11:49:23] 2025-02-22 10:49:07,199 | INFO     | intersect: -23303023531.1847
[2025-02-22 11:49:23] 2025-02-22 10:49:07,199 | INFO     | chi2: 5.256804098644518
[2025-02-22 11:49:23] 2025-02-22 10:49:07,199 | INFO     | model: linear, x: [1740201313.0, 1740201374.0, 1740201435.0, 1740201496.0, 1740201557.0, 1740201618.0, 1740201679.0, 1740201740.0, 1740201801.0, 1740201862.0, 1740
[2025-02-22 11:49:23] 2025-02-22 10:49:07,200 | INFO     | sum of square deviations: 10546523325.0
[2025-02-22 11:49:23] 2025-02-22 10:49:07,202 | INFO     | sum of deviations: 166641439679.99997
[2025-02-22 11:49:23] 2025-02-22 10:49:07,202 | INFO     | mean x: 1740211164.5
[2025-02-22 11:49:23] 2025-02-22 10:49:07,202 | INFO     | mean y: 2327460.734567901
[2025-02-22 11:49:23] 2025-02-22 10:49:07,202 | INFO     | -- intersect: -27494060198.322662
[2025-02-22 11:49:23] 2025-02-22 10:49:07,202 | INFO     | intersect: -27494060198.322662
[2025-02-22 11:49:23] 2025-02-22 10:49:07,203 | INFO     | chi2: 4.4634751122786245
[2025-02-22 11:49:23] 2025-02-22 10:49:07,203 | INFO     | current chi2=4.4634751122786245 (change=15.091469483720266 %)
[2025-02-22 11:49:23] 2025-02-22 10:49:07,203 | INFO     | right removable region: 323
[2025-02-22 11:49:23] 2025-02-22 10:49:07,203 | INFO     | model: linear, x: [1740201618.0, 1740201679.0, 1740201740.0, 1740201801.0, 1740201862.0, 1740201923.0, 1740201984.0, 1740202045.0, 1740202106.0, 1740202167.0, 1740
[2025-02-22 11:49:23] 2025-02-22 10:49:07,208 | INFO     | sum of square deviations: 10546523325.0
[2025-02-22 11:49:23] 2025-02-22 10:49:07,210 | INFO     | sum of deviations: 66863551769.50002
[2025-02-22 11:49:23] 2025-02-22 10:49:07,210 | INFO     | mean x: 1740211469.5
[2025-02-22 11:49:23] 2025-02-22 10:49:07,210 | INFO     | mean y: 2346648.8981481483
[2025-02-22 11:49:23] 2025-02-22 10:49:07,211 | INFO     | -- intersect: -11030362054.734379
[2025-02-22 11:49:23] 2025-02-22 10:49:07,211 | INFO     | intersect: -11030362054.734379
[2025-02-22 11:49:23] 2025-02-22 10:49:07,211 | INFO     | chi2: 2.598829926916428
[2025-02-22 11:49:23] 2025-02-22 10:49:07,211 | INFO     | current chi2=2.598829926916428 (change=50.56254944736207 %)
[2025-02-22 11:49:23] 2025-02-22 10:49:07,211 | INFO     | model: linear, x: [1740201923.0, 1740201984.0, 1740202045.0, 1740202106.0, 1740202167.0, 1740202228.0, 1740202289.0, 1740202350.0, 1740202411.0, 1740202472.0, 1740
[2025-02-22 11:49:23] 2025-02-22 10:49:07,212 | INFO     | sum of square deviations: 10065751520.0
[2025-02-22 11:49:23] 2025-02-22 10:49:07,214 | INFO     | sum of deviations: 655033494.0000038
[2025-02-22 11:49:23] 2025-02-22 10:49:07,214 | INFO     | mean x: 1740211622.0
[2025-02-22 11:49:23] 2025-02-22 10:49:07,214 | INFO     | mean y: 2367651.385579937
[2025-02-22 11:49:23] 2025-02-22 10:49:07,215 | INFO     | -- intersect: -110877434.86487758
[2025-02-22 11:49:23] 2025-02-22 10:49:07,215 | INFO     | intersect: -110877434.86487758
[2025-02-22 11:49:23] 2025-02-22 10:49:07,215 | INFO     | chi2: 0.9571513082977402
[2025-02-22 11:49:23] 2025-02-22 10:49:07,215 | INFO     | current chi2=0.9571513082977402 (change=63.16991356824098 %)
[2025-02-22 11:49:23] 2025-02-22 10:49:07,215 | INFO     | model: linear, x: [1740202228.0, 1740202289.0, 1740202350.0, 1740202411.0, 1740202472.0, 1740202533.0, 1740202594.0, 1740202655.0, 1740202716.0, 1740202777.0, 1740
[2025-02-22 11:49:23] 2025-02-22 10:49:07,216 | INFO     | sum of square deviations: 9599817202.5
[2025-02-22 11:49:23] 2025-02-22 10:49:07,218 | INFO     | sum of deviations: -14842875599.5
[2025-02-22 11:49:23] 2025-02-22 10:49:07,218 | INFO     | mean x: 1740211774.5
[2025-02-22 11:49:23] 2025-02-22 10:49:07,218 | INFO     | mean y: 2372701.493630573
[2025-02-22 11:49:23] 2025-02-22 10:49:07,218 | INFO     | -- intersect: 2693022569.1767383
[2025-02-22 11:49:23] 2025-02-22 10:49:07,218 | INFO     | intersect: 2693022569.1767383
[2025-02-22 11:49:23] 2025-02-22 10:49:07,219 | INFO     | chi2: 0.8387052474252276
[2025-02-22 11:49:23] 2025-02-22 10:49:07,219 | INFO     | current chi2=0.8387052474252276 (change=12.374852319134868 %)
[2025-02-22 11:49:23] 2025-02-22 10:49:07,219 | INFO     | left removable region: 30
[2025-02-22 11:49:23] 2025-02-22 10:49:07,219 | INFO     | model: linear, x: [1740203143.0, 1740203204.0, 1740203265.0, 1740203326.0, 1740203387.0, 1740203448.0, 1740203509.0, 1740203570.0, 1740203631.0, 1740203692.0, 1740
[2025-02-22 11:49:23] 2025-02-22 10:49:07,219 | INFO     | sum of square deviations: 7799669962.0
[2025-02-22 11:49:23] 2025-02-22 10:49:07,222 | INFO     | sum of deviations: -156067523.99999833
[2025-02-22 11:49:23] 2025-02-22 10:49:07,222 | INFO     | mean x: 1740212049.0
[2025-02-22 11:49:23] 2025-02-22 10:49:07,222 | INFO     | mean y: 2381476.730375427
[2025-02-22 11:49:23] 2025-02-22 10:49:07,222 | INFO     | -- intersect: 37202255.948673554
[2025-02-22 11:49:23] 2025-02-22 10:49:07,222 | INFO     | intersect: 37202255.948673554
[2025-02-22 11:49:23] 2025-02-22 10:49:07,223 | INFO     | chi2: 0.004873521301223417
[2025-02-22 11:49:23] 2025-02-22 10:49:07,223 | INFO     | -- intersect: 37202255.948673554
[2025-02-22 11:49:23] 2025-02-22 10:49:07,223 | INFO     | current memory leak: -0.02 B/s (using 293 data points, chi2=0.00)
[2025-02-22 11:49:23] 2025-02-22 10:49:07,224 | INFO     | ..............................
[2025-02-22 11:49:23] 2025-02-22 10:49:07,224 | INFO     | . Timing measurements:
[2025-02-22 11:49:23] 2025-02-22 10:49:07,224 | INFO     | . get job = 0 s
[2025-02-22 11:49:23] 2025-02-22 10:49:07,224 | INFO     | . initial setup = 1 s
[2025-02-22 11:49:23] 2025-02-22 10:49:07,224 | INFO     | . payload setup = 7 s
[2025-02-22 11:49:23] 2025-02-22 10:49:07,224 | INFO     | . stage-in = 0 s
[2025-02-22 11:49:23] 2025-02-22 10:49:07,224 | INFO     | . payload execution = 20025 s
[2025-02-22 11:49:23] 2025-02-22 10:49:07,224 | INFO     | . stage-out = 1 s
[2025-02-22 11:49:23] 2025-02-22 10:49:07,224 | INFO     | . log creation = 0 s
[2025-02-22 11:49:23] 2025-02-22 10:49:07,224 | INFO     | ..............................
[2025-02-22 11:49:23] 2025-02-22 10:49:07,314 | INFO     | 
[2025-02-22 11:49:23] 2025-02-22 10:49:07,315 | INFO     | job summary report
[2025-02-22 11:49:23] 2025-02-22 10:49:07,315 | INFO     | --------------------------------------------------
[2025-02-22 11:49:23] 2025-02-22 10:49:07,315 | INFO     | PanDA job id: 6520504264
[2025-02-22 11:49:23] 2025-02-22 10:49:07,315 | INFO     | task id: 43205094
[2025-02-22 11:49:23] 2025-02-22 10:49:07,315 | INFO     | errors: (none)
[2025-02-22 11:49:23] 2025-02-22 10:49:07,315 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 11:49:23] 2025-02-22 10:49:07,315 | INFO     | pilot state: finished 
[2025-02-22 11:49:23] 2025-02-22 10:49:07,315 | INFO     | transexitcode: 0
[2025-02-22 11:49:23] 2025-02-22 10:49:07,315 | INFO     | exeerrorcode: 0
[2025-02-22 11:49:23] 2025-02-22 10:49:07,316 | INFO     | exeerrordiag: 
[2025-02-22 11:49:23] 2025-02-22 10:49:07,316 | INFO     | exitcode: 0
[2025-02-22 11:49:23] 2025-02-22 10:49:07,316 | INFO     | exitmsg: OK
[2025-02-22 11:49:23] 2025-02-22 10:49:07,316 | INFO     | cpuconsumptiontime: 77058 s
[2025-02-22 11:49:23] 2025-02-22 10:49:07,316 | INFO     | nevents: 400
[2025-02-22 11:49:23] 2025-02-22 10:49:07,316 | INFO     | neventsw: 0
[2025-02-22 11:49:23] 2025-02-22 10:49:07,316 | INFO     | pid: 1431508
[2025-02-22 11:49:23] 2025-02-22 10:49:07,316 | INFO     | pgrp: 1431508
[2025-02-22 11:49:23] 2025-02-22 10:49:07,316 | INFO     | corecount: 4
[2025-02-22 11:49:23] 2025-02-22 10:49:07,316 | INFO     | event service: False
[2025-02-22 11:49:23] 2025-02-22 10:49:07,316 | INFO     | sizes: {0: 2383371, 6: 2383577, 11: 2383605, 20036: 2416422, 20037: 2416421, 20039: 2425440, 20042: 2425624, 20048: 2425794}
[2025-02-22 11:49:23] 2025-02-22 10:49:07,316 | INFO     | --------------------------------------------------
[2025-02-22 11:49:23] 2025-02-22 10:49:07,317 | INFO     | 
[2025-02-22 11:49:23] 2025-02-22 10:49:07,317 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-02-22 11:49:23] 2025-02-22 10:49:07,347 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 11:49:23] 2025-02-22 10:49:07,348 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 11:49:23] 2025-02-22 10:49:07,348 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 11:49:23] 2025-02-22 10:49:07,348 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 11:49:23] 2025-02-22 10:49:07,348 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 11:49:23] 2025-02-22 10:49:07,348 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 11:49:23] 2025-02-22 10:49:07,348 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 11:49:23] 2025-02-22 10:49:07,348 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 11:49:23] 2025-02-22 10:49:07,348 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 11:49:23] 2025-02-22 10:49:07,348 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 11:49:23] 2025-02-22 10:49:07,348 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 11:49:23] 2025-02-22 10:49:07,349 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 11:49:23] 2025-02-22 10:49:07,349 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 11:49:23] 2025-02-22 10:49:07,349 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 11:49:23] 2025-02-22 10:49:07,349 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 11:49:23] 2025-02-22 10:49:07,349 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 11:49:23] 2025-02-22 10:49:07,349 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 11:49:23] 2025-02-22 10:49:07,349 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 11:49:23] 2025-02-22 10:49:07,349 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 11:49:23] 2025-02-22 10:49:07,349 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 11:49:23] 2025-02-22 10:49:07,350 | INFO     | job 6520504264 has completed (purged errors)
[2025-02-22 11:49:23] 2025-02-22 10:49:07,350 | INFO     | overall cleanup function is called
[2025-02-22 11:49:23] 2025-02-22 10:49:08,359 | INFO     | --- collectZombieJob: --- 10, [1431508]
[2025-02-22 11:49:23] 2025-02-22 10:49:08,359 | INFO     | zombie collector waiting for pid 1431508
[2025-02-22 11:49:23] 2025-02-22 10:49:08,359 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 11:49:23] 2025-02-22 10:49:08,360 | INFO     | collected zombie processes
[2025-02-22 11:49:23] 2025-02-22 10:49:08,360 | INFO     | will attempt to kill all subprocesses of pid=1431508
[2025-02-22 11:49:23] 2025-02-22 10:49:08,665 | INFO     | process IDs to be killed: [1431508] (in reverse order)
[2025-02-22 11:49:23] 2025-02-22 10:49:08,909 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 11:49:23] 2025-02-22 10:49:08,910 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 11:49:23] 2025-02-22 10:49:08,933 | INFO     | did not find any defunct processes belonging to 1431508
[2025-02-22 11:49:23] 2025-02-22 10:49:08,957 | INFO     | did not find any defunct processes belonging to 1431508
[2025-02-22 11:49:23] 2025-02-22 10:49:08,958 | INFO     | ready for new job
[2025-02-22 11:49:23] 2025-02-22 10:49:08,958 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 11:49:23] 2025-02-22 10:49:08,961 | INFO     | **************************************
[2025-02-22 11:49:23] 2025-02-22 10:49:08,961 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 11:49:23] 2025-02-22 10:49:08,961 | INFO     | **************************************
[2025-02-22 11:49:23] 2025-02-22 10:49:08,961 | INFO     | 
[2025-02-22 11:49:23] 2025-02-22 10:49:08,969 | INFO     | architecture information:
[2025-02-22 11:49:23] 2025-02-22 10:49:08,969 | INFO     | executing command: cat /etc/os-release
[2025-02-22 11:49:23] 2025-02-22 10:49:08,990 | INFO     | cat /etc/os-release:
[2025-02-22 11:49:23] NAME="CentOS Linux"
[2025-02-22 11:49:23] VERSION="7 (Core)"
[2025-02-22 11:49:23] ID="centos"
[2025-02-22 11:49:23] ID_LIKE="rhel fedora"
[2025-02-22 11:49:23] VERSION_ID="7"
[2025-02-22 11:49:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 11:49:23] ANSI_COLOR="0;31"
[2025-02-22 11:49:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 11:49:23] HOME_URL="https://www.centos.org/"
[2025-02-22 11:49:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 11:49:23] 
[2025-02-22 11:49:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 11:49:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 11:49:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 11:49:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 11:49:23] 
[2025-02-22 11:49:23] 2025-02-22 10:49:08,991 | INFO     | **************************************
[2025-02-22 11:49:23] 2025-02-22 10:49:09,494 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-02-22 11:49:23] 2025-02-22 10:49:09,515 | INFO     | sufficient remaining disk space (3238652805120 B)
[2025-02-22 11:49:23] 2025-02-22 10:49:09,515 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 11:49:23] 2025-02-22 10:49:09,516 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 11:49:23] 2025-02-22 10:49:09,516 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 11:49:23] 2025-02-22 10:49:09,516 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-22 11:49:23] 2025-02-22 10:49:09,517 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 11:49:23] 2025-02-22 10:49:09,517 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 11:49:23] 2025-02-22 10:49:09,517 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 11:49:23] 2025-02-22 10:49:09,534 | INFO     | all data control threads have been joined
[2025-02-22 11:49:23] 2025-02-22 10:49:09,752 | INFO     | all job control threads have been joined
[2025-02-22 11:49:23] 2025-02-22 10:49:10,294 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 11:49:23] 2025-02-22 10:49:10,294 | INFO     | aborting loop
[2025-02-22 11:49:23] 2025-02-22 10:49:10,521 | INFO     | [job] retrieve thread has finished
[2025-02-22 11:49:23] 2025-02-22 10:49:10,539 | INFO     | [data] control thread has finished
[2025-02-22 11:49:23] 2025-02-22 10:49:10,613 | INFO     | [job] validate thread has finished
[2025-02-22 11:49:23] 2025-02-22 10:49:10,634 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 11:49:23] 2025-02-22 10:49:10,737 | INFO     | all payload control threads have been joined
[2025-02-22 11:49:23] 2025-02-22 10:49:10,758 | INFO     | [job] control thread has finished
[2025-02-22 11:49:23] 2025-02-22 10:49:10,854 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 11:49:23] 2025-02-22 10:49:10,889 | INFO     | [data] copytool_in thread has finished
[2025-02-22 11:49:23] 2025-02-22 10:49:11,079 | INFO     | [payload] failed_post thread has finished
[2025-02-22 11:49:23] 2025-02-22 10:49:11,285 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 11:49:23] 2025-02-22 10:49:11,300 | INFO     | [job] job monitor thread has finished
[2025-02-22 11:49:23] 2025-02-22 10:49:11,503 | INFO     | [payload] validate_post thread has finished
[2025-02-22 11:49:23] 2025-02-22 10:49:11,521 | INFO     | [data] copytool_out thread has finished
[2025-02-22 11:49:23] 2025-02-22 10:49:11,656 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 11:49:23] 2025-02-22 10:49:11,741 | INFO     | [payload] control thread has finished
[2025-02-22 11:49:23] 2025-02-22 10:49:11,985 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 11:49:23] 2025-02-22 10:49:12,325 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 11:49:23] 2025-02-22 10:49:13,331 | INFO     | [job] queue monitor thread has finished
[2025-02-22 11:49:23] 2025-02-22 10:49:15,991 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 11:49:23] 2025-02-22 10:49:17,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22746070406976)>', '<ExcThread(monitor, started 22745840580352)>']
[2025-02-22 11:49:23] 2025-02-22 10:49:18,562 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 11:49:23] 2025-02-22 10:49:18,562 | INFO     | [monitor] control thread has ended
[2025-02-22 11:49:23] 2025-02-22 10:49:22,787 | INFO     | all workflow threads have been joined
[2025-02-22 11:49:23] 2025-02-22 10:49:22,787 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 11:49:23] 2025-02-22 10:49:22,788 | INFO     | traces error code: 0
[2025-02-22 11:49:23] 2025-02-22 10:49:22,788 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 11:49:23] 2025-02-22 10:49:22,961 [wrapper] ==== pilot stdout END ====
[2025-02-22 11:49:23] 2025-02-22 10:49:22,965 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 11:49:23] 2025-02-22 10:49:22,968 [wrapper] pilotpid: 1421386
[2025-02-22 11:49:23] 2025-02-22 10:49:22,970 [wrapper] Pilot exit status: 0
[2025-02-22 11:49:23] 2025-02-22 10:49:22,983 [wrapper] pandaids: 6520504264 6520504264
[2025-02-22 11:49:23] 2025-02-22 10:49:23,110 [wrapper] cleanup supervisor_pilot 2884550 1421387
[2025-02-22 11:49:23] 2025-02-22 10:49:23,114 [wrapper] Test setup, not cleaning
[2025-02-22 11:49:23] 2025-02-22 10:49:23,121 [wrapper] apfmon messages muted
[2025-02-22 11:49:23] 2025-02-22 10:49:23,124 [wrapper] ==== wrapper stdout END ====
[2025-02-22 11:49:23] 2025-02-22 10:49:23,128 [wrapper] ==== wrapper stderr END ====
[2025-02-22 11:49:23]  *** Error codes and diagnostics ***
[2025-02-22 11:49:23]     "exeErrorCode": 0,
[2025-02-22 11:49:23]     "exeErrorDiag": "",
[2025-02-22 11:49:23]     "pilotErrorCode": 0,
[2025-02-22 11:49:23]     "pilotErrorDiag": "",
[2025-02-22 11:49:23]  *** Listing of results directory ***
[2025-02-22 11:49:23] total 996668
[2025-02-22 11:49:23] drwx------ 4 boinc boinc      4096 Dec 18 12:03 pilot3
[2025-02-22 11:49:23] -rw-r--r-- 1 boinc boinc    491065 Feb 20 10:58 pilot3.tar.gz
[2025-02-22 11:49:23] -rw-r--r-- 1 boinc boinc      5118 Feb 20 11:12 queuedata.json
[2025-02-22 11:49:23] -rwx------ 1 boinc boinc     35865 Feb 20 11:13 runpilot2-wrapper.sh
[2025-02-22 11:49:23] -rw-r--r-- 1 boinc boinc       100 Feb 22 05:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 11:49:23] -rwxr-xr-x 1 boinc boinc      7986 Feb 22 05:35 run_atlas
[2025-02-22 11:49:23] -rw-r--r-- 1 boinc boinc       105 Feb 22 05:35 job.xml
[2025-02-22 11:49:23] -rw-r--r-- 3 boinc boinc 343023685 Feb 22 05:35 EVNT.43092757._001797.pool.root.1
[2025-02-22 11:49:23] -rw-r--r-- 3 boinc boinc 343023685 Feb 22 05:35 ATLAS.root_0
[2025-02-22 11:49:23] -rw-r--r-- 2 boinc boinc     17569 Feb 22 05:35 start_atlas.sh
[2025-02-22 11:49:23] drwxrwx--x 2 boinc boinc      4096 Feb 22 05:35 shared
[2025-02-22 11:49:23] -rw-r--r-- 2 boinc boinc    503555 Feb 22 05:35 input.tar.gz
[2025-02-22 11:49:23] -rw-r--r-- 1 boinc boinc         0 Feb 22 05:35 boinc_lockfile
[2025-02-22 11:49:23] -rw-r--r-- 1 boinc boinc      2548 Feb 22 06:14 pandaJob.out
[2025-02-22 11:49:23] -rw------- 1 boinc boinc       424 Feb 22 06:14 setup.sh.local
[2025-02-22 11:49:23] -rw------- 1 boinc boinc    987689 Feb 22 06:14 agis_schedconf.cvmfs.json
[2025-02-22 11:49:23] -rw-r--r-- 1 boinc boinc      6678 Feb 22 06:37 init_data.xml
[2025-02-22 11:49:23] -rw------- 1 boinc boinc 325463958 Feb 22 11:48 HITS.43205094._025867.pool.root.1
[2025-02-22 11:49:23] -rw-r--r-- 1 boinc boinc       531 Feb 22 11:48 boinc_task_state.xml
[2025-02-22 11:49:23] -rw------- 1 boinc boinc        97 Feb 22 11:48 pilot_heartbeat.json
[2025-02-22 11:49:23] -rw------- 1 boinc boinc      1030 Feb 22 11:48 memory_monitor_summary.json
[2025-02-22 11:49:23] -rw------- 1 boinc boinc   1582569 Feb 22 11:48 agis_ddmendpoints.agis.ALL.json
[2025-02-22 11:49:23] -rw------- 1 boinc boinc    412396 Feb 22 11:48 log.43205094._025867.job.log.tgz.1
[2025-02-22 11:49:23] -rw------- 1 boinc boinc      7700 Feb 22 11:49 heartbeat.json
[2025-02-22 11:49:23] -rw-r--r-- 1 boinc boinc        28 Feb 22 11:49 wrapper_checkpoint.txt
[2025-02-22 11:49:23] -rw------- 1 boinc boinc      4349 Feb 22 11:49 pilotlog.txt
[2025-02-22 11:49:23] -rw-r--r-- 1 boinc boinc      8192 Feb 22 11:49 boinc_mmap_file
[2025-02-22 11:49:23] -rw------- 1 boinc boinc   2215734 Feb 22 11:49 log.43205094._025867.job.log.1
[2025-02-22 11:49:23] -rw------- 1 boinc boinc       357 Feb 22 11:49 output.list
[2025-02-22 11:49:23] -rw-r--r-- 1 boinc boinc       620 Feb 22 11:49 runtime_log
[2025-02-22 11:49:23] -rw------- 1 boinc boinc   2652160 Feb 22 11:49 result.tar.gz
[2025-02-22 11:49:23] -rw-r--r-- 1 boinc boinc     11501 Feb 22 11:49 runtime_log.err
[2025-02-22 11:49:23] -rw------- 1 boinc boinc       791 Feb 22 11:49 85QKDmfjI56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm5ypKDm78zuRn.diag
[2025-02-22 11:49:23] -rw-r--r-- 1 boinc boinc     23267 Feb 22 11:49 stderr.txt
[2025-02-22 11:49:23] HITS file was successfully produced:
[2025-02-22 11:49:23] -rw------- 1 boinc boinc 325463958 Feb 22 11:48 shared/HITS.pool.root.1
[2025-02-22 11:49:23]  *** Contents of shared directory: ***
[2025-02-22 11:49:23] total 655936
[2025-02-22 11:49:23] -rw-r--r-- 3 boinc boinc 343023685 Feb 22 05:35 ATLAS.root_0
[2025-02-22 11:49:23] -rw-r--r-- 2 boinc boinc     17569 Feb 22 05:35 start_atlas.sh
[2025-02-22 11:49:23] -rw-r--r-- 2 boinc boinc    503555 Feb 22 05:35 input.tar.gz
[2025-02-22 11:49:23] -rw------- 1 boinc boinc 325463958 Feb 22 11:48 HITS.pool.root.1
[2025-02-22 11:49:23] -rw------- 1 boinc boinc   2652160 Feb 22 11:49 result.tar.gz
11:49:24 (1416962): run_atlas exited; CPU time 76830.047997
11:49:24 (1416962): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN