Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:01:44 (1966651): wrapper (7.7.26015): starting
02:01:44 (1966651): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 02:01:44] Arguments: --nthreads 4
[2025-02-22 02:01:44] Threads: 4
[2025-02-22 02:01:44] Checking for CVMFS
[2025-02-22 02:01:44] No cvmfs_config command found, will try listing directly
[2025-02-22 02:01:44] CVMFS is ok
[2025-02-22 02:01:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 02:01:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 02:01:44] Further information can be found at the LHC@home message board.
[2025-02-22 02:01:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 02:01:44] Checking for apptainer binary...
[2025-02-22 02:01:44] which: no apptainer in ((null))
[2025-02-22 02:01:44] apptainer is not installed, using version from CVMFS
[2025-02-22 02:01:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 02:01:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-02-22 02:01:44] apptainer works
[2025-02-22 02:01:44] Set ATHENA_PROC_NUMBER=4
[2025-02-22 02:01:44] Set ATHENA_CORE_NUMBER=4
[2025-02-22 02:01:44] Starting ATLAS job with PandaID=6520503666
[2025-02-22 02:01:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
06:10:10 (2503060): wrapper (7.7.26015): starting
06:10:10 (2503060): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 06:10:10] Arguments: --nthreads 4
[2025-02-22 06:10:10] Threads: 4
[2025-02-22 06:10:10] This job has been restarted, cleaning up previous attempt
[2025-02-22 06:10:10] Checking for CVMFS
[2025-02-22 06:10:10] No cvmfs_config command found, will try listing directly
[2025-02-22 06:10:10] CVMFS is ok
[2025-02-22 06:10:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 06:10:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 06:10:10] Further information can be found at the LHC@home message board.
[2025-02-22 06:10:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 06:10:10] Checking for apptainer binary...
[2025-02-22 06:10:10] which: no apptainer in ((null))
[2025-02-22 06:10:10] apptainer is not installed, using version from CVMFS
[2025-02-22 06:10:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 06:10:10] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-02-22 06:10:10] apptainer works
[2025-02-22 06:10:10] Set ATHENA_PROC_NUMBER=4
[2025-02-22 06:10:10] Set ATHENA_CORE_NUMBER=4
[2025-02-22 06:10:10] Starting ATLAS job with PandaID=6520503666
[2025-02-22 06:10:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 12:32:58]  *** The last 200 lines of the pilot log: ***
[2025-02-22 12:32:58] 2025-02-22 11:32:45,242 | INFO     | mean x: 1740212484.5
[2025-02-22 12:32:58] 2025-02-22 11:32:45,242 | INFO     | mean y: 2352561.063829787
[2025-02-22 12:32:58] 2025-02-22 11:32:45,242 | INFO     | -- intersect: -10629160658.645819
[2025-02-22 12:32:58] 2025-02-22 11:32:45,242 | INFO     | intersect: -10629160658.645819
[2025-02-22 12:32:58] 2025-02-22 11:32:45,242 | INFO     | chi2: 3.637303501295303
[2025-02-22 12:32:58] 2025-02-22 11:32:45,243 | INFO     | model: linear, x: [1740201047.0, 1740201108.0, 1740201169.0, 1740201230.0, 1740201291.0, 1740201352.0, 1740201413.0, 1740201474.0, 1740201535.0, 1740201596.0, 1740
[2025-02-22 12:32:58] 2025-02-22 11:32:45,244 | INFO     | sum of square deviations: 15834231770.0
[2025-02-22 12:32:58] 2025-02-22 11:32:45,247 | INFO     | sum of deviations: 121394261399.00002
[2025-02-22 12:32:58] 2025-02-22 11:32:45,247 | INFO     | mean x: 1740212332.0
[2025-02-22 12:32:58] 2025-02-22 11:32:45,247 | INFO     | mean y: 2357368.7088948786
[2025-02-22 12:32:58] 2025-02-22 11:32:45,247 | INFO     | -- intersect: -13339103953.13529
[2025-02-22 12:32:58] 2025-02-22 11:32:45,247 | INFO     | intersect: -13339103953.13529
[2025-02-22 12:32:58] 2025-02-22 11:32:45,248 | INFO     | chi2: 2.9756753510754668
[2025-02-22 12:32:58] 2025-02-22 11:32:45,248 | INFO     | current chi2=2.9756753510754668 (change=18.190072672907824 %)
[2025-02-22 12:32:58] 2025-02-22 11:32:45,248 | INFO     | right removable region: 370
[2025-02-22 12:32:58] 2025-02-22 11:32:45,248 | INFO     | model: linear, x: [1740201352.0, 1740201413.0, 1740201474.0, 1740201535.0, 1740201596.0, 1740201657.0, 1740201718.0, 1740201779.0, 1740201840.0, 1740201901.0, 1740
[2025-02-22 12:32:58] 2025-02-22 11:32:45,249 | INFO     | sum of square deviations: 15834231770.0
[2025-02-22 12:32:58] 2025-02-22 11:32:45,252 | INFO     | sum of deviations: 22492657855.999996
[2025-02-22 12:32:58] 2025-02-22 11:32:45,252 | INFO     | mean x: 1740212637.0
[2025-02-22 12:32:58] 2025-02-22 11:32:45,252 | INFO     | mean y: 2370898.0754716983
[2025-02-22 12:32:58] 2025-02-22 11:32:45,252 | INFO     | -- intersect: -2469615618.813091
[2025-02-22 12:32:58] 2025-02-22 11:32:45,252 | INFO     | intersect: -2469615618.813091
[2025-02-22 12:32:58] 2025-02-22 11:32:45,253 | INFO     | chi2: 1.662889510714738
[2025-02-22 12:32:58] 2025-02-22 11:32:45,253 | INFO     | current chi2=1.662889510714738 (change=54.282354768510366 %)
[2025-02-22 12:32:58] 2025-02-22 11:32:45,254 | INFO     | model: linear, x: [1740201657.0, 1740201718.0, 1740201779.0, 1740201840.0, 1740201901.0, 1740201962.0, 1740202023.0, 1740202084.0, 1740202145.0, 1740202206.0, 1740
[2025-02-22 12:32:58] 2025-02-22 11:32:45,254 | INFO     | sum of square deviations: 15202619927.5
[2025-02-22 12:32:58] 2025-02-22 11:32:45,257 | INFO     | sum of deviations: -32158790598.50001
[2025-02-22 12:32:58] 2025-02-22 11:32:45,257 | INFO     | mean x: 1740212789.5
[2025-02-22 12:32:58] 2025-02-22 11:32:45,257 | INFO     | mean y: 2384093.199453552
[2025-02-22 12:32:58] 2025-02-22 11:32:45,257 | INFO     | -- intersect: 3683535037.000293
[2025-02-22 12:32:58] 2025-02-22 11:32:45,257 | INFO     | intersect: 3683535037.000293
[2025-02-22 12:32:58] 2025-02-22 11:32:45,258 | INFO     | chi2: 0.8134830441325858
[2025-02-22 12:32:58] 2025-02-22 11:32:45,258 | INFO     | current chi2=0.8134830441325858 (change=51.080150611874565 %)
[2025-02-22 12:32:58] 2025-02-22 11:32:45,258 | INFO     | model: linear, x: [1740201962.0, 1740202023.0, 1740202084.0, 1740202145.0, 1740202206.0, 1740202267.0, 1740202328.0, 1740202389.0, 1740202450.0, 1740202511.0, 1740
[2025-02-22 12:32:58] 2025-02-22 11:32:45,259 | INFO     | sum of square deviations: 14588031660.0
[2025-02-22 12:32:58] 2025-02-22 11:32:45,262 | INFO     | sum of deviations: -44551648412.0
[2025-02-22 12:32:58] 2025-02-22 11:32:45,262 | INFO     | mean x: 1740212942.0
[2025-02-22 12:32:58] 2025-02-22 11:32:45,263 | INFO     | mean y: 2387157.3324099723
[2025-02-22 12:32:58] 2025-02-22 11:32:45,263 | INFO     | -- intersect: 5316973590.989502
[2025-02-22 12:32:58] 2025-02-22 11:32:45,263 | INFO     | intersect: 5316973590.989502
[2025-02-22 12:32:58] 2025-02-22 11:32:45,263 | INFO     | chi2: 0.7418250880645714
[2025-02-22 12:32:58] 2025-02-22 11:32:45,263 | INFO     | current chi2=0.7418250880645714 (change=8.80878299613768 %)
[2025-02-22 12:32:58] 2025-02-22 11:32:45,263 | INFO     | left removable region: 30
[2025-02-22 12:32:58] 2025-02-22 11:32:45,264 | INFO     | model: linear, x: [1740202877.0, 1740202938.0, 1740202999.0, 1740203060.0, 1740203121.0, 1740203182.0, 1740203243.0, 1740203304.0, 1740203365.0, 1740203426.0, 1740
[2025-02-22 12:32:58] 2025-02-22 11:32:45,264 | INFO     | sum of square deviations: 12187409905.0
[2025-02-22 12:32:58] 2025-02-22 11:32:45,267 | INFO     | sum of deviations: -15089626516.499998
[2025-02-22 12:32:58] 2025-02-22 11:32:45,268 | INFO     | mean x: 1740213216.5
[2025-02-22 12:32:58] 2025-02-22 11:32:45,268 | INFO     | mean y: 2390547.6088235294
[2025-02-22 12:32:58] 2025-02-22 11:32:45,268 | INFO     | -- intersect: 2157004834.0528264
[2025-02-22 12:32:58] 2025-02-22 11:32:45,268 | INFO     | intersect: 2157004834.0528264
[2025-02-22 12:32:58] 2025-02-22 11:32:45,269 | INFO     | chi2: 0.05244748298234377
[2025-02-22 12:32:58] 2025-02-22 11:32:45,269 | INFO     | -- intersect: 2157004834.0528264
[2025-02-22 12:32:58] 2025-02-22 11:32:45,269 | INFO     | current memory leak: -1.24 B/s (using 340 data points, chi2=0.05)
[2025-02-22 12:32:58] 2025-02-22 11:32:45,270 | INFO     | ..............................
[2025-02-22 12:32:58] 2025-02-22 11:32:45,270 | INFO     | . Timing measurements:
[2025-02-22 12:32:58] 2025-02-22 11:32:45,270 | INFO     | . get job = 0 s
[2025-02-22 12:32:58] 2025-02-22 11:32:45,270 | INFO     | . initial setup = 1 s
[2025-02-22 12:32:58] 2025-02-22 11:32:45,270 | INFO     | . payload setup = 6 s
[2025-02-22 12:32:58] 2025-02-22 11:32:45,270 | INFO     | . stage-in = 0 s
[2025-02-22 12:32:58] 2025-02-22 11:32:45,271 | INFO     | . payload execution = 22912 s
[2025-02-22 12:32:58] 2025-02-22 11:32:45,271 | INFO     | . stage-out = 1 s
[2025-02-22 12:32:58] 2025-02-22 11:32:45,271 | INFO     | . log creation = 0 s
[2025-02-22 12:32:58] 2025-02-22 11:32:45,271 | INFO     | ..............................
[2025-02-22 12:32:58] 2025-02-22 11:32:45,384 | WARNING  | process 2513695 can no longer be monitored (due to stat problems) - aborting
[2025-02-22 12:32:58] 2025-02-22 11:32:45,384 | INFO     | using path: /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-6520503666/memory_monitor_summary.json (trf name=prmon)
[2025-02-22 12:32:58] 2025-02-22 11:32:45,520 | INFO     | number of running child processes to parent process 2513695: 1
[2025-02-22 12:32:58] 2025-02-22 11:32:45,521 | INFO     | maximum number of monitored processes: 6
[2025-02-22 12:32:58] 2025-02-22 11:32:45,521 | INFO     | aborting job monitoring since job object (job id=6520503666) has expired
[2025-02-22 12:32:58] 2025-02-22 11:32:45,819 | INFO     | 
[2025-02-22 12:32:58] 2025-02-22 11:32:45,819 | INFO     | job summary report
[2025-02-22 12:32:58] 2025-02-22 11:32:45,819 | INFO     | --------------------------------------------------
[2025-02-22 12:32:58] 2025-02-22 11:32:45,819 | INFO     | PanDA job id: 6520503666
[2025-02-22 12:32:58] 2025-02-22 11:32:45,819 | INFO     | task id: 43205094
[2025-02-22 12:32:58] 2025-02-22 11:32:45,819 | INFO     | errors: (none)
[2025-02-22 12:32:58] 2025-02-22 11:32:45,819 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 12:32:58] 2025-02-22 11:32:45,819 | INFO     | pilot state: finished 
[2025-02-22 12:32:58] 2025-02-22 11:32:45,820 | INFO     | transexitcode: 0
[2025-02-22 12:32:58] 2025-02-22 11:32:45,820 | INFO     | exeerrorcode: 0
[2025-02-22 12:32:58] 2025-02-22 11:32:45,820 | INFO     | exeerrordiag: 
[2025-02-22 12:32:58] 2025-02-22 11:32:45,820 | INFO     | exitcode: 0
[2025-02-22 12:32:58] 2025-02-22 11:32:45,820 | INFO     | exitmsg: OK
[2025-02-22 12:32:58] 2025-02-22 11:32:45,820 | INFO     | cpuconsumptiontime: 87425 s
[2025-02-22 12:32:58] 2025-02-22 11:32:45,820 | INFO     | nevents: 400
[2025-02-22 12:32:58] 2025-02-22 11:32:45,820 | INFO     | neventsw: 0
[2025-02-22 12:32:58] 2025-02-22 11:32:45,820 | INFO     | pid: 2513695
[2025-02-22 12:32:58] 2025-02-22 11:32:45,820 | INFO     | pgrp: 2513695
[2025-02-22 12:32:58] 2025-02-22 11:32:45,820 | INFO     | corecount: 4
[2025-02-22 12:32:58] 2025-02-22 11:32:45,820 | INFO     | event service: False
[2025-02-22 12:32:58] 2025-02-22 11:32:45,821 | INFO     | sizes: {0: 2383200, 1: 2383399, 5: 2383605, 11: 2383661, 22922: 2418140, 22925: 2427287, 22930: 2427401}
[2025-02-22 12:32:58] 2025-02-22 11:32:45,821 | INFO     | --------------------------------------------------
[2025-02-22 12:32:58] 2025-02-22 11:32:45,821 | INFO     | 
[2025-02-22 12:32:58] 2025-02-22 11:32:45,821 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2025-02-22 12:32:58] 2025-02-22 11:32:45,839 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 12:32:58] 2025-02-22 11:32:45,840 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 12:32:58] 2025-02-22 11:32:45,840 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 12:32:58] 2025-02-22 11:32:45,840 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 12:32:58] 2025-02-22 11:32:45,840 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 12:32:58] 2025-02-22 11:32:45,840 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 12:32:58] 2025-02-22 11:32:45,840 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 12:32:58] 2025-02-22 11:32:45,840 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 12:32:58] 2025-02-22 11:32:45,840 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 12:32:58] 2025-02-22 11:32:45,841 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 12:32:58] 2025-02-22 11:32:45,841 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 12:32:58] 2025-02-22 11:32:45,841 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 12:32:58] 2025-02-22 11:32:45,841 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 12:32:58] 2025-02-22 11:32:45,841 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 12:32:58] 2025-02-22 11:32:45,841 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 12:32:58] 2025-02-22 11:32:45,841 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 12:32:58] 2025-02-22 11:32:45,841 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 12:32:58] 2025-02-22 11:32:45,841 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 12:32:58] 2025-02-22 11:32:45,841 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 12:32:58] 2025-02-22 11:32:45,841 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 12:32:58] 2025-02-22 11:32:45,842 | INFO     | job 6520503666 has completed (purged errors)
[2025-02-22 12:32:58] 2025-02-22 11:32:45,842 | INFO     | overall cleanup function is called
[2025-02-22 12:32:58] 2025-02-22 11:32:46,850 | INFO     | --- collectZombieJob: --- 10, [2513695]
[2025-02-22 12:32:58] 2025-02-22 11:32:46,850 | INFO     | zombie collector waiting for pid 2513695
[2025-02-22 12:32:58] 2025-02-22 11:32:46,850 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 12:32:58] 2025-02-22 11:32:46,850 | INFO     | collected zombie processes
[2025-02-22 12:32:58] 2025-02-22 11:32:46,850 | INFO     | will attempt to kill all subprocesses of pid=2513695
[2025-02-22 12:32:58] 2025-02-22 11:32:46,990 | INFO     | process IDs to be killed: [2513695] (in reverse order)
[2025-02-22 12:32:58] 2025-02-22 11:32:47,094 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 12:32:58] 2025-02-22 11:32:47,094 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 12:32:58] 2025-02-22 11:32:47,103 | INFO     | did not find any defunct processes belonging to 2513695
[2025-02-22 12:32:58] 2025-02-22 11:32:47,112 | INFO     | did not find any defunct processes belonging to 2513695
[2025-02-22 12:32:58] 2025-02-22 11:32:47,112 | INFO     | ready for new job
[2025-02-22 12:32:58] 2025-02-22 11:32:47,113 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 12:32:58] 2025-02-22 11:32:47,115 | INFO     | **************************************
[2025-02-22 12:32:58] 2025-02-22 11:32:47,115 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 12:32:58] 2025-02-22 11:32:47,115 | INFO     | **************************************
[2025-02-22 12:32:58] 2025-02-22 11:32:47,115 | INFO     | 
[2025-02-22 12:32:58] 2025-02-22 11:32:47,119 | INFO     | architecture information:
[2025-02-22 12:32:58] 2025-02-22 11:32:47,119 | INFO     | executing command: cat /etc/os-release
[2025-02-22 12:32:58] 2025-02-22 11:32:47,132 | INFO     | cat /etc/os-release:
[2025-02-22 12:32:58] NAME="CentOS Linux"
[2025-02-22 12:32:58] VERSION="7 (Core)"
[2025-02-22 12:32:58] ID="centos"
[2025-02-22 12:32:58] ID_LIKE="rhel fedora"
[2025-02-22 12:32:58] VERSION_ID="7"
[2025-02-22 12:32:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 12:32:58] ANSI_COLOR="0;31"
[2025-02-22 12:32:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 12:32:58] HOME_URL="https://www.centos.org/"
[2025-02-22 12:32:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 12:32:58] 
[2025-02-22 12:32:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 12:32:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 12:32:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 12:32:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 12:32:58] 
[2025-02-22 12:32:58] 2025-02-22 11:32:47,132 | INFO     | **************************************
[2025-02-22 12:32:58] 2025-02-22 11:32:47,635 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2025-02-22 12:32:58] 2025-02-22 11:32:47,649 | INFO     | sufficient remaining disk space (654937423872 B)
[2025-02-22 12:32:58] 2025-02-22 11:32:47,650 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 12:32:58] 2025-02-22 11:32:47,650 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 12:32:58] 2025-02-22 11:32:47,650 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 12:32:58] 2025-02-22 11:32:47,666 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 12:32:58] 2025-02-22 11:32:47,666 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 12:32:58] 2025-02-22 11:32:47,666 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 12:32:58] 2025-02-22 11:32:48,024 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-22 12:32:58] 2025-02-22 11:32:48,024 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-22 12:32:58] 2025-02-22 11:32:48,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 12:32:58] 2025-02-22 11:32:48,024 | INFO     | will abort loop
[2025-02-22 12:32:58] 2025-02-22 11:32:48,077 | INFO     | all payload control threads have been joined
[2025-02-22 12:32:58] 2025-02-22 11:32:48,559 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 12:32:58] 2025-02-22 11:32:48,589 | INFO     | all data control threads have been joined
[2025-02-22 12:32:58] 2025-02-22 11:32:48,655 | INFO     | [job] retrieve thread has finished
[2025-02-22 12:32:58] 2025-02-22 11:32:48,799 | INFO     | [payload] validate_post thread has finished
[2025-02-22 12:32:58] 2025-02-22 11:32:48,919 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 12:32:58] 2025-02-22 11:32:49,029 | INFO     | [job] job monitor thread has finished
[2025-02-22 12:32:58] 2025-02-22 11:32:49,071 | INFO     | all job control threads have been joined
[2025-02-22 12:32:58] 2025-02-22 11:32:49,081 | INFO     | [payload] control thread has finished
[2025-02-22 12:32:58] 2025-02-22 11:32:49,476 | INFO     | [payload] failed_post thread has finished
[2025-02-22 12:32:58] 2025-02-22 11:32:49,594 | INFO     | [data] control thread has finished
[2025-02-22 12:32:58] 2025-02-22 11:32:49,597 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 12:32:58] 2025-02-22 11:32:49,943 | INFO     | [job] validate thread has finished
[2025-02-22 12:32:58] 2025-02-22 11:32:50,076 | INFO     | [job] control thread has finished
[2025-02-22 12:32:58] 2025-02-22 11:32:50,103 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 12:32:58] 2025-02-22 11:32:50,108 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 12:32:58] 2025-02-22 11:32:50,154 | INFO     | [data] copytool_in thread has finished
[2025-02-22 12:32:58] 2025-02-22 11:32:50,386 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 12:32:58] 2025-02-22 11:32:50,564 | INFO     | [data] copytool_out thread has finished
[2025-02-22 12:32:58] 2025-02-22 11:32:51,391 | INFO     | [job] queue monitor thread has finished
[2025-02-22 12:32:58] 2025-02-22 11:32:51,656 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 12:32:58] 2025-02-22 11:32:53,553 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23107503540032)>', '<ExcThread(monitor, started 23107267950336)>']
[2025-02-22 12:32:58] 2025-02-22 11:32:53,697 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 12:32:58] 2025-02-22 11:32:53,697 | INFO     | [monitor] control thread has ended
[2025-02-22 12:32:58] 2025-02-22 11:32:58,578 | INFO     | all workflow threads have been joined
[2025-02-22 12:32:58] 2025-02-22 11:32:58,578 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 12:32:58] 2025-02-22 11:32:58,578 | INFO     | traces error code: 0
[2025-02-22 12:32:58] 2025-02-22 11:32:58,578 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 12:32:58] 2025-02-22 11:32:58,711 [wrapper] ==== pilot stdout END ====
[2025-02-22 12:32:58] 2025-02-22 11:32:58,714 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 12:32:58] 2025-02-22 11:32:58,717 [wrapper] pilotpid: 2506753
[2025-02-22 12:32:58] 2025-02-22 11:32:58,719 [wrapper] Pilot exit status: 0
[2025-02-22 12:32:58] 2025-02-22 11:32:58,729 [wrapper] pandaids: 6520503666 6520503666
[2025-02-22 12:32:58] 2025-02-22 11:32:58,790 [wrapper] cleanup supervisor_pilot 3351894 2506754
[2025-02-22 12:32:58] 2025-02-22 11:32:58,793 [wrapper] Test setup, not cleaning
[2025-02-22 12:32:58] 2025-02-22 11:32:58,799 [wrapper] apfmon messages muted
[2025-02-22 12:32:58] 2025-02-22 11:32:58,801 [wrapper] ==== wrapper stdout END ====
[2025-02-22 12:32:58] 2025-02-22 11:32:58,804 [wrapper] ==== wrapper stderr END ====
[2025-02-22 12:32:58]  *** Error codes and diagnostics ***
[2025-02-22 12:32:58]     "exeErrorCode": 0,
[2025-02-22 12:32:58]     "exeErrorDiag": "",
[2025-02-22 12:32:58]     "pilotErrorCode": 0,
[2025-02-22 12:32:58]     "pilotErrorDiag": "",
[2025-02-22 12:32:58]  *** Listing of results directory ***
[2025-02-22 12:32:58] total 996760
[2025-02-22 12:32:58] drwx------ 4 boinc boinc      4096 Dec 18 12:03 pilot3
[2025-02-22 12:32:58] -rw-r--r-- 1 boinc boinc    491065 Feb 20 10:47 pilot3.tar.gz
[2025-02-22 12:32:58] -rwx------ 1 boinc boinc     35865 Feb 20 10:50 runpilot2-wrapper.sh
[2025-02-22 12:32:58] -rw-r--r-- 1 boinc boinc      5118 Feb 20 10:50 queuedata.json
[2025-02-22 12:32:58] -rw-r--r-- 1 boinc boinc       100 Feb 22 02:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 12:32:58] -rwxr-xr-x 1 boinc boinc      7986 Feb 22 02:01 run_atlas
[2025-02-22 12:32:58] -rw-r--r-- 1 boinc boinc       105 Feb 22 02:01 job.xml
[2025-02-22 12:32:58] -rw-r--r-- 3 boinc boinc 342908786 Feb 22 02:01 EVNT.43092757._001787.pool.root.1
[2025-02-22 12:32:58] -rw-r--r-- 3 boinc boinc 342908786 Feb 22 02:01 ATLAS.root_0
[2025-02-22 12:32:58] -rw-r--r-- 2 boinc boinc     17569 Feb 22 02:01 start_atlas.sh
[2025-02-22 12:32:58] drwxrwx--x 2 boinc boinc      4096 Feb 22 02:01 shared
[2025-02-22 12:32:58] -rw-r--r-- 2 boinc boinc    503553 Feb 22 02:01 input.tar.gz
[2025-02-22 12:32:58] -rw-r--r-- 1 boinc boinc         0 Feb 22 02:01 boinc_lockfile
[2025-02-22 12:32:58] -rw-r--r-- 1 boinc boinc      2548 Feb 22 06:10 pandaJob.out
[2025-02-22 12:32:58] -rw------- 1 boinc boinc       424 Feb 22 06:10 setup.sh.local
[2025-02-22 12:32:58] -rw------- 1 boinc boinc    987689 Feb 22 06:10 agis_schedconf.cvmfs.json
[2025-02-22 12:32:58] -rw-r--r-- 1 boinc boinc      6644 Feb 22 08:02 init_data.xml
[2025-02-22 12:32:58] -rw------- 1 boinc boinc 325069263 Feb 22 12:31 HITS.43205094._025619.pool.root.1
[2025-02-22 12:32:58] -rw-r--r-- 1 boinc boinc       533 Feb 22 12:31 boinc_task_state.xml
[2025-02-22 12:32:58] -rw------- 1 boinc boinc        97 Feb 22 12:32 pilot_heartbeat.json
[2025-02-22 12:32:58] -rw------- 1 boinc boinc      1038 Feb 22 12:32 memory_monitor_summary.json
[2025-02-22 12:32:58] -rw------- 1 boinc boinc   1582569 Feb 22 12:32 agis_ddmendpoints.agis.ALL.json
[2025-02-22 12:32:58] -rw------- 1 boinc boinc    443364 Feb 22 12:32 log.43205094._025619.job.log.tgz.1
[2025-02-22 12:32:58] -rw------- 1 boinc boinc      7745 Feb 22 12:32 heartbeat.json
[2025-02-22 12:32:58] -rw-r--r-- 1 boinc boinc        29 Feb 22 12:32 wrapper_checkpoint.txt
[2025-02-22 12:32:58] -rw-r--r-- 1 boinc boinc      8192 Feb 22 12:32 boinc_mmap_file
[2025-02-22 12:32:58] -rw------- 1 boinc boinc      4411 Feb 22 12:32 pilotlog.txt
[2025-02-22 12:32:58] -rw------- 1 boinc boinc   2550649 Feb 22 12:32 log.43205094._025619.job.log.1
[2025-02-22 12:32:58] -rw------- 1 boinc boinc       357 Feb 22 12:32 output.list
[2025-02-22 12:32:58] -rw-r--r-- 1 boinc boinc       620 Feb 22 12:32 runtime_log
[2025-02-22 12:32:58] -rw------- 1 boinc boinc   3010560 Feb 22 12:32 result.tar.gz
[2025-02-22 12:32:58] -rw-r--r-- 1 boinc boinc     11501 Feb 22 12:32 runtime_log.err
[2025-02-22 12:32:58] -rw------- 1 boinc boinc       791 Feb 22 12:32 gW5KDmTNI56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmLkbKDmS0A5mn.diag
[2025-02-22 12:32:58] -rw-r--r-- 1 boinc boinc     23289 Feb 22 12:32 stderr.txt
[2025-02-22 12:32:58] HITS file was successfully produced:
[2025-02-22 12:32:58] -rw------- 1 boinc boinc 325069263 Feb 22 12:31 shared/HITS.pool.root.1
[2025-02-22 12:32:58]  *** Contents of shared directory: ***
[2025-02-22 12:32:58] total 655784
[2025-02-22 12:32:58] -rw-r--r-- 3 boinc boinc 342908786 Feb 22 02:01 ATLAS.root_0
[2025-02-22 12:32:58] -rw-r--r-- 2 boinc boinc     17569 Feb 22 02:01 start_atlas.sh
[2025-02-22 12:32:58] -rw-r--r-- 2 boinc boinc    503553 Feb 22 02:01 input.tar.gz
[2025-02-22 12:32:58] -rw------- 1 boinc boinc 325069263 Feb 22 12:31 HITS.pool.root.1
[2025-02-22 12:32:58] -rw------- 1 boinc boinc   3010560 Feb 22 12:32 result.tar.gz
12:33:00 (2503060): run_atlas exited; CPU time 87487.197145
12:33:00 (2503060): called boinc_finish(0)

</stderr_txt>
]]>

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