Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:10:56 (20947): wrapper (7.7.26015): starting
07:10:56 (20947): wrapper: running run_atlas (--nthreads 10)
[2025-02-20 07:10:57] Arguments: --nthreads 10
[2025-02-20 07:10:57] Threads: 10
[2025-02-20 07:10:57] Checking for CVMFS
[2025-02-20 07:10:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-20 07:10:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-20 07:10:58] Running cvmfs_config stat atlas.cern.ch
[2025-02-20 07:11:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-20 07:11:00] 2.11.2.0 38461 133560 182668 142863 0 132 17222668 18432001 6080 130560 0 41339024 99.438 55068391 45643 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-20 07:11:00] CVMFS is ok
[2025-02-20 07:11:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-20 07:11:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-20 07:11:00] Further information can be found at the LHC@home message board.
[2025-02-20 07:11:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-20 07:11:00] Checking for apptainer binary...
[2025-02-20 07:11:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-20 07:11:00] Running /usr/bin/apptainer --version
[2025-02-20 07:11:00] apptainer version 1.3.2-1.el7
[2025-02-20 07:11:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-20 07:11:27] c-211-4.aglt2.org
[2025-02-20 07:11:27] apptainer works
[2025-02-20 07:11:27] Set ATHENA_PROC_NUMBER=10
[2025-02-20 07:11:27] Set ATHENA_CORE_NUMBER=10
[2025-02-20 07:11:28] Starting ATLAS job with PandaID=6520502940
[2025-02-20 07:11:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:47:14 (21774): wrapper (7.7.26015): starting
14:47:14 (21774): wrapper: running run_atlas (--nthreads 10)
[2025-02-20 14:47:14] Arguments: --nthreads 10
[2025-02-20 14:47:14] Threads: 10
[2025-02-20 14:47:14] This job has been restarted, cleaning up previous attempt
[2025-02-20 14:47:14] Checking for CVMFS
[2025-02-20 14:47:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-20 14:47:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-20 14:47:16] Running cvmfs_config stat atlas.cern.ch
[2025-02-20 14:47:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-20 14:47:17] 2.11.2.0 38461 134016 183628 142875 0 177 16335851 18432000 5302 130560 0 42009406 99.421 59490935 46873 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-20 14:47:17] CVMFS is ok
[2025-02-20 14:47:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-20 14:47:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-20 14:47:17] Further information can be found at the LHC@home message board.
[2025-02-20 14:47:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-20 14:47:17] Checking for apptainer binary...
[2025-02-20 14:47:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-20 14:47:17] Running /usr/bin/apptainer --version
[2025-02-20 14:47:18] apptainer version 1.3.2-1.el7
[2025-02-20 14:47:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-20 14:47:31] c-211-4.aglt2.org
[2025-02-20 14:47:31] apptainer works
[2025-02-20 14:47:31] Set ATHENA_PROC_NUMBER=10
[2025-02-20 14:47:31] Set ATHENA_CORE_NUMBER=10
[2025-02-20 14:47:32] Starting ATLAS job with PandaID=6520502940
[2025-02-20 14:47:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-21 07:35:11]  *** The last 200 lines of the pilot log: ***
[2025-02-21 07:35:11] 2025-02-21 12:34:47,144 | INFO     | sum of deviations: 1042222386225.379
[2025-02-21 07:35:11] 2025-02-21 12:34:47,145 | INFO     | mean x: 1740111174.964467
[2025-02-21 07:35:11] 2025-02-21 12:34:47,145 | INFO     | mean y: 2598461.6680203048
[2025-02-21 07:35:11] 2025-02-21 12:34:47,145 | INFO     | -- intersect: -6117464483.008403
[2025-02-21 07:35:11] 2025-02-21 12:34:47,145 | INFO     | intersect: -6117464483.008403
[2025-02-21 07:35:11] 2025-02-21 12:34:47,182 | INFO     | chi2: 13.147425863679526
[2025-02-21 07:35:11] 2025-02-21 12:34:47,205 | INFO     | model: linear, x: [1740081162.0, 1740081223.0, 1740081284.0, 1740081345.0, 1740081406.0, 1740081467.0, 1740081528.0, 1740081589.0, 1740081650.0, 1740081711.0, 1740
[2025-02-21 07:35:11] 2025-02-21 12:34:47,205 | INFO     | sum of square deviations: 291844355396.0198
[2025-02-21 07:35:11] 2025-02-21 12:34:47,528 | INFO     | sum of deviations: 1387442456982.563
[2025-02-21 07:35:11] 2025-02-21 12:34:47,529 | INFO     | mean x: 1740111022.4683673
[2025-02-21 07:35:11] 2025-02-21 12:34:47,529 | INFO     | mean y: 2610187.582653061
[2025-02-21 07:35:11] 2025-02-21 12:34:47,529 | INFO     | -- intersect: -8269963421.592856
[2025-02-21 07:35:11] 2025-02-21 12:34:47,529 | INFO     | intersect: -8269963421.592856
[2025-02-21 07:35:11] 2025-02-21 12:34:47,566 | INFO     | chi2: 9.205856778602431
[2025-02-21 07:35:11] 2025-02-21 12:34:47,566 | INFO     | current chi2=9.205856778602431 (change=29.979777988069074 %)
[2025-02-21 07:35:11] 2025-02-21 12:34:47,583 | INFO     | model: linear, x: [1740081162.0, 1740081223.0, 1740081284.0, 1740081345.0, 1740081406.0, 1740081467.0, 1740081528.0, 1740081589.0, 1740081650.0, 1740081711.0, 1740
[2025-02-21 07:35:11] 2025-02-21 12:34:47,584 | INFO     | sum of square deviations: 287400159278.1374
[2025-02-21 07:35:11] 2025-02-21 12:34:48,085 | INFO     | sum of deviations: 1452359984605.1448
[2025-02-21 07:35:11] 2025-02-21 12:34:48,085 | INFO     | mean x: 1740110869.9702563
[2025-02-21 07:35:11] 2025-02-21 12:34:48,108 | INFO     | mean y: 2612404.6256410256
[2025-02-21 07:35:11] 2025-02-21 12:34:48,132 | INFO     | -- intersect: -8790936640.959375
[2025-02-21 07:35:11] 2025-02-21 12:34:48,132 | INFO     | intersect: -8790936640.959375
[2025-02-21 07:35:11] 2025-02-21 12:34:48,184 | INFO     | chi2: 8.334981675519778
[2025-02-21 07:35:11] 2025-02-21 12:34:48,185 | INFO     | current chi2=8.334981675519778 (change=9.460011425627062 %)
[2025-02-21 07:35:11] 2025-02-21 12:34:48,185 | INFO     | right removable region: 974
[2025-02-21 07:35:11] 2025-02-21 12:34:48,203 | INFO     | model: linear, x: [1740081467.0, 1740081528.0, 1740081589.0, 1740081650.0, 1740081711.0, 1740081772.0, 1740081833.0, 1740081894.0, 1740081955.0, 1740082016.0, 1740
[2025-02-21 07:35:11] 2025-02-21 12:34:48,203 | INFO     | sum of square deviations: 291843835858.0815
[2025-02-21 07:35:11] 2025-02-21 12:34:48,283 | INFO     | monitor loop #3666: job 0:6520502940 is in state 'finished'
[2025-02-21 07:35:11] 2025-02-21 12:34:48,283 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-21 07:35:11] 2025-02-21 12:34:48,433 | INFO     | sum of deviations: 707833285833.1432
[2025-02-21 07:35:11] 2025-02-21 12:34:48,433 | INFO     | mean x: 1740111327.4693878
[2025-02-21 07:35:11] 2025-02-21 12:34:48,433 | INFO     | mean y: 2609815.0214285715
[2025-02-21 07:35:11] 2025-02-21 12:34:48,433 | INFO     | -- intersect: -4217827855.0655546
[2025-02-21 07:35:11] 2025-02-21 12:34:48,449 | INFO     | intersect: -4217827855.0655546
[2025-02-21 07:35:11] 2025-02-21 12:34:48,454 | INFO     | chi2: 9.346418408036634
[2025-02-21 07:35:11] 2025-02-21 12:34:48,455 | INFO     | current chi2=9.346418408036634 (change=28.91065897654826 %)
[2025-02-21 07:35:11] 2025-02-21 12:34:48,465 | INFO     | model: linear, x: [1740081772.0, 1740081833.0, 1740081894.0, 1740081955.0, 1740082016.0, 1740082077.0, 1740082138.0, 1740082199.0, 1740082260.0, 1740082321.0, 1740
[2025-02-21 07:35:11] 2025-02-21 12:34:48,466 | INFO     | sum of square deviations: 287399239518.3591
[2025-02-21 07:35:11] 2025-02-21 12:34:48,697 | INFO     | sum of deviations: 466452739021.2561
[2025-02-21 07:35:11] 2025-02-21 12:34:48,697 | INFO     | mean x: 1740111479.974359
[2025-02-21 07:35:11] 2025-02-21 12:34:48,698 | INFO     | mean y: 2618096.2502564103
[2025-02-21 07:35:11] 2025-02-21 12:34:48,698 | INFO     | -- intersect: -2821605681.782814
[2025-02-21 07:35:11] 2025-02-21 12:34:48,698 | INFO     | intersect: -2821605681.782814
[2025-02-21 07:35:11] 2025-02-21 12:34:48,699 | INFO     | chi2: 7.456931860735207
[2025-02-21 07:35:11] 2025-02-21 12:34:48,738 | INFO     | current chi2=7.456931860735207 (change=20.21615623024889 %)
[2025-02-21 07:35:11] 2025-02-21 12:34:48,738 | INFO     | left removable region: 20
[2025-02-21 07:35:11] 2025-02-21 12:34:48,739 | INFO     | model: linear, x: [1740082382.0, 1740082444.0, 1740082504.0, 1740082565.0, 1740082626.0, 1740082687.0, 1740082748.0, 1740082809.0, 1740082870.0, 1740082931.0, 1740
[2025-02-21 07:35:11] 2025-02-21 12:34:48,765 | INFO     | sum of square deviations: 269225484886.43298
[2025-02-21 07:35:11] 2025-02-21 12:34:49,106 | INFO     | sum of deviations: 526729341766.7294
[2025-02-21 07:35:11] 2025-02-21 12:34:49,106 | INFO     | mean x: 1740111449.4916143
[2025-02-21 07:35:11] 2025-02-21 12:34:49,106 | INFO     | mean y: 2644789.5911949687
[2025-02-21 07:35:11] 2025-02-21 12:34:49,106 | INFO     | -- intersect: -3401816562.8624997
[2025-02-21 07:35:11] 2025-02-21 12:34:49,106 | INFO     | intersect: -3401816562.8624997
[2025-02-21 07:35:11] 2025-02-21 12:34:49,131 | INFO     | chi2: 0.37896319229061626
[2025-02-21 07:35:11] 2025-02-21 12:34:49,131 | INFO     | -- intersect: -3401816562.8624997
[2025-02-21 07:35:11] 2025-02-21 12:34:49,131 | INFO     | current memory leak: 1.96 B/s (using 954 data points, chi2=0.38)
[2025-02-21 07:35:11] 2025-02-21 12:34:49,161 | INFO     | ..............................
[2025-02-21 07:35:11] 2025-02-21 12:34:49,161 | INFO     | . Timing measurements:
[2025-02-21 07:35:11] 2025-02-21 12:34:49,161 | INFO     | . get job = 1 s
[2025-02-21 07:35:11] 2025-02-21 12:34:49,161 | INFO     | . initial setup = 5 s
[2025-02-21 07:35:11] 2025-02-21 12:34:49,161 | INFO     | . payload setup = 64 s
[2025-02-21 07:35:11] 2025-02-21 12:34:49,161 | INFO     | . stage-in = 0 s
[2025-02-21 07:35:11] 2025-02-21 12:34:49,168 | INFO     | . payload execution = 60101 s
[2025-02-21 07:35:11] 2025-02-21 12:34:49,168 | INFO     | . stage-out = 14 s
[2025-02-21 07:35:11] 2025-02-21 12:34:49,176 | INFO     | . log creation = 1 s
[2025-02-21 07:35:11] 2025-02-21 12:34:49,176 | INFO     | ..............................
[2025-02-21 07:35:11] 2025-02-21 12:34:49,286 | INFO     | 
[2025-02-21 07:35:11] 2025-02-21 12:34:49,286 | INFO     | job summary report
[2025-02-21 07:35:11] 2025-02-21 12:34:49,286 | INFO     | --------------------------------------------------
[2025-02-21 07:35:11] 2025-02-21 12:34:49,286 | INFO     | PanDA job id: 6520502940
[2025-02-21 07:35:11] 2025-02-21 12:34:49,286 | INFO     | task id: 43205075
[2025-02-21 07:35:11] 2025-02-21 12:34:49,286 | INFO     | errors: (none)
[2025-02-21 07:35:11] 2025-02-21 12:34:49,286 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-21 07:35:11] 2025-02-21 12:34:49,287 | INFO     | pilot state: finished 
[2025-02-21 07:35:11] 2025-02-21 12:34:49,287 | INFO     | transexitcode: 0
[2025-02-21 07:35:11] 2025-02-21 12:34:49,287 | INFO     | exeerrorcode: 0
[2025-02-21 07:35:11] 2025-02-21 12:34:49,287 | INFO     | exeerrordiag: 
[2025-02-21 07:35:11] 2025-02-21 12:34:49,287 | INFO     | exitcode: 0
[2025-02-21 07:35:11] 2025-02-21 12:34:49,287 | INFO     | exitmsg: OK
[2025-02-21 07:35:11] 2025-02-21 12:34:49,287 | INFO     | cpuconsumptiontime: 113546 s
[2025-02-21 07:35:11] 2025-02-21 12:34:49,287 | INFO     | nevents: 400
[2025-02-21 07:35:11] 2025-02-21 12:34:49,287 | INFO     | neventsw: 0
[2025-02-21 07:35:11] 2025-02-21 12:34:49,287 | INFO     | pid: 14594
[2025-02-21 07:35:11] 2025-02-21 12:34:49,288 | INFO     | pgrp: 14594
[2025-02-21 07:35:11] 2025-02-21 12:34:49,288 | INFO     | corecount: 10
[2025-02-21 07:35:11] 2025-02-21 12:34:49,288 | INFO     | event service: False
[2025-02-21 07:35:11] 2025-02-21 12:34:49,288 | INFO     | sizes: {0: 2388497, 1: 2389098, 2: 2389381, 13: 2389381, 24: 2389437, 35: 2389465, 39: 2389827, 46: 2389855, 60172: 2440284, 60173: 2440283, 60188: 2450122, 60192:
[2025-02-21 07:35:11] 2025-02-21 12:34:49,288 | INFO     | --------------------------------------------------
[2025-02-21 07:35:11] 2025-02-21 12:34:49,288 | INFO     | 
[2025-02-21 07:35:11] 2025-02-21 12:34:49,288 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-21 07:35:11] 2025-02-21 12:34:50,079 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-21 07:35:11] 2025-02-21 12:34:50,091 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-21 07:35:11] 2025-02-21 12:34:50,091 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-21 07:35:11] 2025-02-21 12:34:50,092 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-21 07:35:11] 2025-02-21 12:34:50,092 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-21 07:35:11] 2025-02-21 12:34:50,092 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-21 07:35:11] 2025-02-21 12:34:50,092 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-21 07:35:11] 2025-02-21 12:34:50,092 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-21 07:35:11] 2025-02-21 12:34:50,092 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-21 07:35:11] 2025-02-21 12:34:50,092 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-21 07:35:11] 2025-02-21 12:34:50,092 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-21 07:35:11] 2025-02-21 12:34:50,092 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-21 07:35:11] 2025-02-21 12:34:50,093 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-21 07:35:11] 2025-02-21 12:34:50,093 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-21 07:35:11] 2025-02-21 12:34:50,093 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-21 07:35:11] 2025-02-21 12:34:50,093 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-21 07:35:11] 2025-02-21 12:34:50,093 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-21 07:35:11] 2025-02-21 12:34:50,093 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-21 07:35:11] 2025-02-21 12:34:50,093 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-21 07:35:11] 2025-02-21 12:34:50,093 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-21 07:35:11] 2025-02-21 12:34:50,128 | INFO     | job 6520502940 has completed (purged errors)
[2025-02-21 07:35:11] 2025-02-21 12:34:50,128 | INFO     | overall cleanup function is called
[2025-02-21 07:35:11] 2025-02-21 12:34:51,160 | INFO     | --- collectZombieJob: --- 10, [14594]
[2025-02-21 07:35:11] 2025-02-21 12:34:51,160 | INFO     | zombie collector waiting for pid 14594
[2025-02-21 07:35:11] 2025-02-21 12:34:51,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-21 07:35:11] 2025-02-21 12:34:51,160 | INFO     | collected zombie processes
[2025-02-21 07:35:11] 2025-02-21 12:34:51,160 | INFO     | will attempt to kill all subprocesses of pid=14594
[2025-02-21 07:35:11] 2025-02-21 12:34:53,593 | INFO     | process IDs to be killed: [14594] (in reverse order)
[2025-02-21 07:35:11] 2025-02-21 12:34:54,406 | WARNING  | found no corresponding commands to process id(s)
[2025-02-21 07:35:11] 2025-02-21 12:34:54,407 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-21 07:35:11] 2025-02-21 12:34:54,420 | INFO     | did not find any defunct processes belonging to 14594
[2025-02-21 07:35:11] 2025-02-21 12:34:54,445 | INFO     | did not find any defunct processes belonging to 14594
[2025-02-21 07:35:11] 2025-02-21 12:34:54,445 | INFO     | ready for new job
[2025-02-21 07:35:11] 2025-02-21 12:34:54,445 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-21 07:35:11] 2025-02-21 12:34:54,453 | INFO     | **************************************
[2025-02-21 07:35:11] 2025-02-21 12:34:54,453 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-21 07:35:11] 2025-02-21 12:34:54,454 | INFO     | **************************************
[2025-02-21 07:35:11] 2025-02-21 12:34:54,454 | INFO     | 
[2025-02-21 07:35:11] 2025-02-21 12:34:54,460 | INFO     | architecture information:
[2025-02-21 07:35:11] 2025-02-21 12:34:54,473 | INFO     | executing command: cat /etc/os-release
[2025-02-21 07:35:11] 2025-02-21 12:34:54,634 | INFO     | cat /etc/os-release:
[2025-02-21 07:35:11] NAME="CentOS Linux"
[2025-02-21 07:35:11] VERSION="7 (Core)"
[2025-02-21 07:35:11] ID="centos"
[2025-02-21 07:35:11] ID_LIKE="rhel fedora"
[2025-02-21 07:35:11] VERSION_ID="7"
[2025-02-21 07:35:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-21 07:35:11] ANSI_COLOR="0;31"
[2025-02-21 07:35:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-21 07:35:11] HOME_URL="https://www.centos.org/"
[2025-02-21 07:35:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-21 07:35:11] 
[2025-02-21 07:35:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-21 07:35:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-21 07:35:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-21 07:35:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-21 07:35:11] 
[2025-02-21 07:35:11] 2025-02-21 12:34:54,635 | INFO     | **************************************
[2025-02-21 07:35:11] 2025-02-21 12:34:55,152 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-21 07:35:11] 2025-02-21 12:34:55,517 | INFO     | sufficient remaining disk space (55771660288 B)
[2025-02-21 07:35:11] 2025-02-21 12:34:55,518 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-21 07:35:11] 2025-02-21 12:34:55,518 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-21 07:35:11] 2025-02-21 12:34:55,536 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-21 07:35:11] 2025-02-21 12:34:55,610 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-21 07:35:11] 2025-02-21 12:34:55,893 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-21 07:35:11] 2025-02-21 12:34:55,893 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-21 07:35:11] 2025-02-21 12:34:55,893 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-21 07:35:11] 2025-02-21 12:34:55,893 | INFO     | will abort loop
[2025-02-21 07:35:11] 2025-02-21 12:34:56,560 | INFO     | [job] retrieve thread has finished
[2025-02-21 07:35:11] 2025-02-21 12:34:56,581 | INFO     | all data control threads have been joined
[2025-02-21 07:35:11] 2025-02-21 12:34:56,815 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-21 07:35:11] 2025-02-21 12:34:56,822 | INFO     | [job] create_data_payload thread has finished
[2025-02-21 07:35:11] 2025-02-21 12:34:56,843 | INFO     | [job] validate thread has finished
[2025-02-21 07:35:11] 2025-02-21 12:34:56,843 | INFO     | [data] copytool_in thread has finished
[2025-02-21 07:35:11] 2025-02-21 12:34:56,898 | INFO     | all payload control threads have been joined
[2025-02-21 07:35:11] 2025-02-21 12:34:56,899 | INFO     | [job] job monitor thread has finished
[2025-02-21 07:35:11] 2025-02-21 12:34:56,964 | INFO     | [payload] validate_post thread has finished
[2025-02-21 07:35:11] 2025-02-21 12:34:57,126 | INFO     | all job control threads have been joined
[2025-02-21 07:35:11] 2025-02-21 12:34:57,389 | INFO     | [payload] validate_pre thread has finished
[2025-02-21 07:35:11] 2025-02-21 12:34:57,397 | INFO     | [payload] execute_payloads thread has finished
[2025-02-21 07:35:11] 2025-02-21 12:34:57,604 | INFO     | [data] control thread has finished
[2025-02-21 07:35:11] 2025-02-21 12:34:57,611 | INFO     | [data] copytool_out thread has finished
[2025-02-21 07:35:11] 2025-02-21 12:34:57,907 | INFO     | [payload] control thread has finished
[2025-02-21 07:35:11] 2025-02-21 12:34:58,128 | INFO     | PID=33559 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-21 07:35:11] 2025-02-21 12:34:58,131 | INFO     | .. there are 7 such processes running
[2025-02-21 07:35:11] 2025-02-21 12:34:58,131 | INFO     | found 0 job(s) in 20 queues
[2025-02-21 07:35:11] 2025-02-21 12:34:58,131 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-21 07:35:11] 2025-02-21 12:34:58,131 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-21 07:35:11] 2025-02-21 12:34:58,132 | INFO     | [payload] failed_post thread has finished
[2025-02-21 07:35:11] 2025-02-21 12:34:58,137 | INFO     | [job] control thread has finished
[2025-02-21 07:35:11] 2025-02-21 12:34:58,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-21 07:35:11] 2025-02-21 12:34:59,401 | INFO     | [job] queue monitor thread has finished
[2025-02-21 07:35:11] 2025-02-21 12:34:59,620 | INFO     | [data] queue_monitor thread has finished
[2025-02-21 07:35:11] 2025-02-21 12:35:00,623 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139648148191040)>', '<ExcThread(monitor, started 139647573292800)>']
[2025-02-21 07:35:11] 2025-02-21 12:35:01,150 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-21 07:35:11] 2025-02-21 12:35:01,150 | INFO     | [monitor] control thread has ended
[2025-02-21 07:35:11] 2025-02-21 12:35:05,649 | INFO     | all workflow threads have been joined
[2025-02-21 07:35:11] 2025-02-21 12:35:05,649 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-21 07:35:11] 2025-02-21 12:35:05,649 | INFO     | traces error code: 0
[2025-02-21 07:35:11] 2025-02-21 12:35:05,649 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-21 07:35:11] 2025-02-21 12:35:07,375 [wrapper] ==== pilot stdout END ====
[2025-02-21 07:35:11] 2025-02-21 12:35:07,426 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-21 07:35:11] 2025-02-21 12:35:07,480 [wrapper] pilotpid: 33559
[2025-02-21 07:35:11] 2025-02-21 12:35:07,541 [wrapper] Pilot exit status: 0
[2025-02-21 07:35:11] 2025-02-21 12:35:07,906 [wrapper] pandaids: 6520502940 6520502940
[2025-02-21 07:35:11] 2025-02-21 12:35:09,231 [wrapper] cleanup supervisor_pilot 18335 33560
[2025-02-21 07:35:11] 2025-02-21 12:35:09,283 [wrapper] Test setup, not cleaning
[2025-02-21 07:35:11] 2025-02-21 12:35:09,345 [wrapper] apfmon messages muted
[2025-02-21 07:35:11] 2025-02-21 12:35:09,348 [wrapper] ==== wrapper stdout END ====
[2025-02-21 07:35:11] 2025-02-21 12:35:09,385 [wrapper] ==== wrapper stderr END ====
[2025-02-21 07:35:11]  *** Error codes and diagnostics ***
[2025-02-21 07:35:12]     "exeErrorCode": 0,
[2025-02-21 07:35:12]     "exeErrorDiag": "",
[2025-02-21 07:35:12]     "pilotErrorCode": 0,
[2025-02-21 07:35:12]     "pilotErrorDiag": "",
[2025-02-21 07:35:12]  *** Listing of results directory ***
[2025-02-21 07:35:12] total 1014096
[2025-02-21 07:35:12] drwx------ 4 boincer umatlas      4096 Dec 18 06:03 pilot3
[2025-02-21 07:35:12] -rw-r--r-- 1 boincer umatlas    491065 Feb 20 02:55 pilot3.tar.gz
[2025-02-21 07:35:12] -rw-r--r-- 1 boincer umatlas      5118 Feb 20 03:46 queuedata.json
[2025-02-21 07:35:12] -rwx------ 1 boincer umatlas     35865 Feb 20 03:47 runpilot2-wrapper.sh
[2025-02-21 07:35:12] -rw-r--r-- 1 boincer umatlas       100 Feb 20 07:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-21 07:35:12] -rwxr-xr-x 1 boincer umatlas      7986 Feb 20 07:10 run_atlas
[2025-02-21 07:35:12] -rw-r--r-- 1 boincer umatlas       105 Feb 20 07:10 job.xml
[2025-02-21 07:35:12] -rw-r--r-- 3 boincer umatlas 344090964 Feb 20 07:10 EVNT.43092757._000405.pool.root.1
[2025-02-21 07:35:12] -rw-r--r-- 3 boincer umatlas 344090964 Feb 20 07:10 ATLAS.root_0
[2025-02-21 07:35:12] -rw-r--r-- 2 boincer umatlas     17569 Feb 20 07:10 start_atlas.sh
[2025-02-21 07:35:12] drwxrwx--x 2 boincer umatlas      4096 Feb 20 07:10 shared
[2025-02-21 07:35:12] -rw-r--r-- 2 boincer umatlas    503553 Feb 20 07:10 input.tar.gz
[2025-02-21 07:35:12] -rw-r--r-- 1 boincer umatlas         0 Feb 20 07:10 boinc_lockfile
[2025-02-21 07:35:12] -rw-r--r-- 1 boincer umatlas      2555 Feb 20 14:47 pandaJob.out
[2025-02-21 07:35:12] -rw------- 1 boincer umatlas       467 Feb 20 14:47 setup.sh.local
[2025-02-21 07:35:12] -rw------- 1 boincer umatlas    994363 Feb 20 14:48 agis_schedconf.cvmfs.json
[2025-02-21 07:35:12] -rw------- 1 boincer umatlas 324680094 Feb 21 07:27 HITS.43205075._054583.pool.root.1
[2025-02-21 07:35:12] -rw-r--r-- 1 boincer umatlas       533 Feb 21 07:28 boinc_task_state.xml
[2025-02-21 07:35:12] -rw-r--r-- 1 boincer umatlas      6229 Feb 21 07:30 init_data.xml
[2025-02-21 07:35:12] -rw------- 1 boincer umatlas      1069 Feb 21 07:33 memory_monitor_summary.json
[2025-02-21 07:35:12] -rw------- 1 boincer umatlas   1582569 Feb 21 07:33 agis_ddmendpoints.agis.ALL.json
[2025-02-21 07:35:12] -rw------- 1 boincer umatlas   1036557 Feb 21 07:33 log.43205075._054583.job.log.tgz.1
[2025-02-21 07:35:12] -rw------- 1 boincer umatlas        96 Feb 21 07:34 pilot_heartbeat.json
[2025-02-21 07:35:12] -rw------- 1 boincer umatlas      7788 Feb 21 07:34 heartbeat.json
[2025-02-21 07:35:12] -rw------- 1 boincer umatlas      4793 Feb 21 07:35 pilotlog.txt
[2025-02-21 07:35:12] -rw-r--r-- 1 boincer umatlas        29 Feb 21 07:35 wrapper_checkpoint.txt
[2025-02-21 07:35:12] -rw------- 1 boincer umatlas   9842521 Feb 21 07:35 log.43205075._054583.job.log.1
[2025-02-21 07:35:12] -rw-r--r-- 1 boincer umatlas      8192 Feb 21 07:35 boinc_mmap_file
[2025-02-21 07:35:12] -rw------- 1 boincer umatlas       357 Feb 21 07:35 output.list
[2025-02-21 07:35:12] -rw-r--r-- 1 boincer umatlas       620 Feb 21 07:35 runtime_log
[2025-02-21 07:35:12] -rw------- 1 boincer umatlas  10895360 Feb 21 07:35 result.tar.gz
[2025-02-21 07:35:12] -rw-r--r-- 1 boincer umatlas     11501 Feb 21 07:35 runtime_log.err
[2025-02-21 07:35:12] -rw------- 1 boincer umatlas       790 Feb 21 07:35 LygMDmTOH56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmFppKDmQ0Gljm.diag
[2025-02-21 07:35:12] -rw-r--r-- 1 boincer umatlas     23869 Feb 21 07:35 stderr.txt
[2025-02-21 07:35:12] HITS file was successfully produced:
[2025-02-21 07:35:12] -rw------- 1 boincer umatlas 324680094 Feb 21 07:27 shared/HITS.pool.root.1
[2025-02-21 07:35:12]  *** Contents of shared directory: ***
[2025-02-21 07:35:12] total 664260
[2025-02-21 07:35:12] -rw-r--r-- 3 boincer umatlas 344090964 Feb 20 07:10 ATLAS.root_0
[2025-02-21 07:35:12] -rw-r--r-- 2 boincer umatlas     17569 Feb 20 07:10 start_atlas.sh
[2025-02-21 07:35:12] -rw-r--r-- 2 boincer umatlas    503553 Feb 20 07:10 input.tar.gz
[2025-02-21 07:35:12] -rw------- 1 boincer umatlas 324680094 Feb 21 07:27 HITS.pool.root.1
[2025-02-21 07:35:12] -rw------- 1 boincer umatlas  10895360 Feb 21 07:35 result.tar.gz
07:35:13 (21774): run_atlas exited; CPU time 113276.818537
07:35:13 (21774): called boinc_finish(0)

</stderr_txt>
]]>

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