Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:24:10 (1024914): wrapper (7.7.26015): starting
19:24:10 (1024914): wrapper: running run_atlas (--nthreads 4)
[2025-02-21 19:24:10] Arguments: --nthreads 4
[2025-02-21 19:24:10] Threads: 4
[2025-02-21 19:24:10] Checking for CVMFS
[2025-02-21 19:24:10] No cvmfs_config command found, will try listing directly
[2025-02-21 19:24:10] CVMFS is ok
[2025-02-21 19:24:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-21 19:24:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-21 19:24:10] Further information can be found at the LHC@home message board.
[2025-02-21 19:24:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-21 19:24:10] Checking for apptainer binary...
[2025-02-21 19:24:10] which: no apptainer in ((null))
[2025-02-21 19:24:10] apptainer is not installed, using version from CVMFS
[2025-02-21 19:24:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-21 19:24:10] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-02-21 19:24:10] apptainer works
[2025-02-21 19:24:10] Set ATHENA_PROC_NUMBER=4
[2025-02-21 19:24:10] Set ATHENA_CORE_NUMBER=4
[2025-02-21 19:24:10] Starting ATLAS job with PandaID=6520502874
[2025-02-21 19:24:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 02:04:56]  *** The last 200 lines of the pilot log: ***
[2025-02-22 02:04:56] 2025-02-22 01:04:35,973 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-22 02:04:56] 2025-02-22 01:04:35,973 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-22 02:04:56] 2025-02-22 01:04:35,980 | INFO     | fitting pss+swap vs Time
[2025-02-22 02:04:56] 2025-02-22 01:04:35,980 | INFO     | model: linear, x: [1740162278.0, 1740162339.0, 1740162400.0, 1740162461.0, 1740162522.0, 1740162583.0, 1740162644.0, 1740162705.0, 1740162766.0, 1740162827.0, 1740
[2025-02-22 02:04:56] 2025-02-22 01:04:35,981 | INFO     | sum of square deviations: 18965499782.5
[2025-02-22 02:04:56] 2025-02-22 01:04:35,984 | INFO     | sum of deviations: 180136720481.49997
[2025-02-22 02:04:56] 2025-02-22 01:04:35,984 | INFO     | mean x: 1740174264.5
[2025-02-22 02:04:56] 2025-02-22 01:04:35,984 | INFO     | mean y: 2325491.4847715735
[2025-02-22 02:04:56] 2025-02-22 01:04:35,984 | INFO     | -- intersect: -16526070209.565153
[2025-02-22 02:04:56] 2025-02-22 01:04:35,985 | INFO     | intersect: -16526070209.565153
[2025-02-22 02:04:56] 2025-02-22 01:04:35,985 | INFO     | chi2: 4.934328887813204
[2025-02-22 02:04:56] 2025-02-22 01:04:35,985 | INFO     | model: linear, x: [1740162278.0, 1740162339.0, 1740162400.0, 1740162461.0, 1740162522.0, 1740162583.0, 1740162644.0, 1740162705.0, 1740162766.0, 1740162827.0, 1740
[2025-02-22 02:04:56] 2025-02-22 01:04:35,986 | INFO     | sum of square deviations: 18252584090.0
[2025-02-22 02:04:56] 2025-02-22 01:04:35,989 | INFO     | sum of deviations: 202699257772.0
[2025-02-22 02:04:56] 2025-02-22 01:04:35,989 | INFO     | mean x: 1740174112.0
[2025-02-22 02:04:56] 2025-02-22 01:04:35,989 | INFO     | mean y: 2330262.3856041133
[2025-02-22 02:04:56] 2025-02-22 01:04:35,990 | INFO     | -- intersect: -19322714298.82256
[2025-02-22 02:04:56] 2025-02-22 01:04:35,990 | INFO     | intersect: -19322714298.82256
[2025-02-22 02:04:56] 2025-02-22 01:04:35,990 | INFO     | chi2: 4.149319987173179
[2025-02-22 02:04:56] 2025-02-22 01:04:35,990 | INFO     | current chi2=4.149319987173179 (change=15.909132092488578 %)
[2025-02-22 02:04:56] 2025-02-22 01:04:35,990 | INFO     | right removable region: 388
[2025-02-22 02:04:56] 2025-02-22 01:04:35,991 | INFO     | model: linear, x: [1740162583.0, 1740162644.0, 1740162705.0, 1740162766.0, 1740162827.0, 1740162888.0, 1740162949.0, 1740163010.0, 1740163071.0, 1740163132.0, 1740
[2025-02-22 02:04:56] 2025-02-22 01:04:35,991 | INFO     | sum of square deviations: 18252584090.0
[2025-02-22 02:04:56] 2025-02-22 01:04:35,995 | INFO     | sum of deviations: 85788628986.99998
[2025-02-22 02:04:56] 2025-02-22 01:04:35,995 | INFO     | mean x: 1740174417.0
[2025-02-22 02:04:56] 2025-02-22 01:04:35,995 | INFO     | mean y: 2345645.622107969
[2025-02-22 02:04:56] 2025-02-22 01:04:35,995 | INFO     | -- intersect: -8176615574.146857
[2025-02-22 02:04:56] 2025-02-22 01:04:35,995 | INFO     | intersect: -8176615574.146857
[2025-02-22 02:04:56] 2025-02-22 01:04:35,996 | INFO     | chi2: 2.4404034399482315
[2025-02-22 02:04:56] 2025-02-22 01:04:35,996 | INFO     | current chi2=2.4404034399482315 (change=50.54234333719556 %)
[2025-02-22 02:04:56] 2025-02-22 01:04:35,996 | INFO     | model: linear, x: [1740162888.0, 1740162949.0, 1740163010.0, 1740163071.0, 1740163132.0, 1740163193.0, 1740163254.0, 1740163315.0, 1740163376.0, 1740163437.0, 1740
[2025-02-22 02:04:56] 2025-02-22 01:04:35,996 | INFO     | sum of square deviations: 17557761760.0
[2025-02-22 02:04:56] 2025-02-22 01:04:36,000 | INFO     | sum of deviations: 7897537233.499996
[2025-02-22 02:04:56] 2025-02-22 01:04:36,000 | INFO     | mean x: 1740174569.5
[2025-02-22 02:04:56] 2025-02-22 01:04:36,000 | INFO     | mean y: 2362741.5911458335
[2025-02-22 02:04:56] 2025-02-22 01:04:36,000 | INFO     | -- intersect: -780373329.3997204
[2025-02-22 02:04:56] 2025-02-22 01:04:36,000 | INFO     | intersect: -780373329.3997204
[2025-02-22 02:04:56] 2025-02-22 01:04:36,001 | INFO     | chi2: 0.8746245476427625
[2025-02-22 02:04:56] 2025-02-22 01:04:36,001 | INFO     | current chi2=0.8746245476427625 (change=64.16065748287438 %)
[2025-02-22 02:04:56] 2025-02-22 01:04:36,001 | INFO     | model: linear, x: [1740163193.0, 1740163254.0, 1740163315.0, 1740163376.0, 1740163437.0, 1740163498.0, 1740163559.0, 1740163620.0, 1740163681.0, 1740163742.0, 1740
[2025-02-22 02:04:56] 2025-02-22 01:04:36,001 | INFO     | sum of square deviations: 16880800230.0
[2025-02-22 02:04:56] 2025-02-22 01:04:36,005 | INFO     | sum of deviations: -5567724858.000004
[2025-02-22 02:04:56] 2025-02-22 01:04:36,005 | INFO     | mean x: 1740174722.0
[2025-02-22 02:04:56] 2025-02-22 01:04:36,005 | INFO     | mean y: 2365762.9894459103
[2025-02-22 02:04:56] 2025-02-22 01:04:36,005 | INFO     | -- intersect: 576320428.9373319
[2025-02-22 02:04:56] 2025-02-22 01:04:36,005 | INFO     | intersect: 576320428.9373319
[2025-02-22 02:04:56] 2025-02-22 01:04:36,006 | INFO     | chi2: 0.8128912926525386
[2025-02-22 02:04:56] 2025-02-22 01:04:36,006 | INFO     | current chi2=0.8128912926525386 (change=7.058257758326572 %)
[2025-02-22 02:04:56] 2025-02-22 01:04:36,006 | INFO     | left removable region: 30
[2025-02-22 02:04:56] 2025-02-22 01:04:36,006 | INFO     | model: linear, x: [1740164108.0, 1740164169.0, 1740164230.0, 1740164291.0, 1740164352.0, 1740164413.0, 1740164474.0, 1740164535.0, 1740164596.0, 1740164657.0, 1740
[2025-02-22 02:04:56] 2025-02-22 01:04:36,006 | INFO     | sum of square deviations: 14227353269.5
[2025-02-22 02:04:56] 2025-02-22 01:04:36,009 | INFO     | sum of deviations: 15052841229.0
[2025-02-22 02:04:56] 2025-02-22 01:04:36,009 | INFO     | mean x: 1740174996.5
[2025-02-22 02:04:56] 2025-02-22 01:04:36,010 | INFO     | mean y: 2372031.586592179
[2025-02-22 02:04:56] 2025-02-22 01:04:36,010 | INFO     | -- intersect: -1838769988.07106
[2025-02-22 02:04:56] 2025-02-22 01:04:36,010 | INFO     | intersect: -1838769988.07106
[2025-02-22 02:04:56] 2025-02-22 01:04:36,010 | INFO     | chi2: 0.002254605664478512
[2025-02-22 02:04:56] 2025-02-22 01:04:36,010 | INFO     | -- intersect: -1838769988.07106
[2025-02-22 02:04:56] 2025-02-22 01:04:36,011 | INFO     | current memory leak: 1.06 B/s (using 358 data points, chi2=0.00)
[2025-02-22 02:04:56] 2025-02-22 01:04:36,011 | INFO     | ..............................
[2025-02-22 02:04:56] 2025-02-22 01:04:36,011 | INFO     | . Timing measurements:
[2025-02-22 02:04:56] 2025-02-22 01:04:36,011 | INFO     | . get job = 0 s
[2025-02-22 02:04:56] 2025-02-22 01:04:36,012 | INFO     | . initial setup = 1 s
[2025-02-22 02:04:56] 2025-02-22 01:04:36,012 | INFO     | . payload setup = 3 s
[2025-02-22 02:04:56] 2025-02-22 01:04:36,012 | INFO     | . stage-in = 0 s
[2025-02-22 02:04:56] 2025-02-22 01:04:36,012 | INFO     | . payload execution = 23988 s
[2025-02-22 02:04:56] 2025-02-22 01:04:36,012 | INFO     | . stage-out = 1 s
[2025-02-22 02:04:56] 2025-02-22 01:04:36,012 | INFO     | . log creation = 0 s
[2025-02-22 02:04:56] 2025-02-22 01:04:36,012 | INFO     | ..............................
[2025-02-22 02:04:56] 2025-02-22 01:04:36,334 | INFO     | 
[2025-02-22 02:04:56] 2025-02-22 01:04:36,334 | INFO     | job summary report
[2025-02-22 02:04:56] 2025-02-22 01:04:36,334 | INFO     | --------------------------------------------------
[2025-02-22 02:04:56] 2025-02-22 01:04:36,334 | INFO     | PanDA job id: 6520502874
[2025-02-22 02:04:56] 2025-02-22 01:04:36,334 | INFO     | task id: 43205094
[2025-02-22 02:04:56] 2025-02-22 01:04:36,335 | INFO     | errors: (none)
[2025-02-22 02:04:56] 2025-02-22 01:04:36,335 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 02:04:56] 2025-02-22 01:04:36,335 | INFO     | pilot state: finished 
[2025-02-22 02:04:56] 2025-02-22 01:04:36,335 | INFO     | transexitcode: 0
[2025-02-22 02:04:56] 2025-02-22 01:04:36,335 | INFO     | exeerrorcode: 0
[2025-02-22 02:04:56] 2025-02-22 01:04:36,335 | INFO     | exeerrordiag: 
[2025-02-22 02:04:56] 2025-02-22 01:04:36,335 | INFO     | exitcode: 0
[2025-02-22 02:04:56] 2025-02-22 01:04:36,335 | INFO     | exitmsg: OK
[2025-02-22 02:04:56] 2025-02-22 01:04:36,335 | INFO     | cpuconsumptiontime: 91884 s
[2025-02-22 02:04:56] 2025-02-22 01:04:36,335 | INFO     | nevents: 400
[2025-02-22 02:04:56] 2025-02-22 01:04:36,335 | INFO     | neventsw: 0
[2025-02-22 02:04:56] 2025-02-22 01:04:36,335 | INFO     | pid: 1046287
[2025-02-22 02:04:56] 2025-02-22 01:04:36,335 | INFO     | pgrp: 1046287
[2025-02-22 02:04:56] 2025-02-22 01:04:36,335 | INFO     | corecount: 4
[2025-02-22 02:04:56] 2025-02-22 01:04:36,336 | INFO     | event service: False
[2025-02-22 02:04:56] 2025-02-22 01:04:36,336 | INFO     | sizes: {0: 2383228, 1: 2383399, 3: 2383605, 11: 2383633, 23996: 2418476, 23999: 2427623, 24005: 2427737}
[2025-02-22 02:04:56] 2025-02-22 01:04:36,336 | INFO     | --------------------------------------------------
[2025-02-22 02:04:56] 2025-02-22 01:04:36,336 | INFO     | 
[2025-02-22 02:04:56] 2025-02-22 01:04:36,336 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2025-02-22 02:04:56] 2025-02-22 01:04:36,354 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 02:04:56] 2025-02-22 01:04:36,354 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 02:04:56] 2025-02-22 01:04:36,355 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 02:04:56] 2025-02-22 01:04:36,355 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 02:04:56] 2025-02-22 01:04:36,355 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 02:04:56] 2025-02-22 01:04:36,355 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 02:04:56] 2025-02-22 01:04:36,355 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 02:04:56] 2025-02-22 01:04:36,355 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 02:04:56] 2025-02-22 01:04:36,355 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 02:04:56] 2025-02-22 01:04:36,355 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 02:04:56] 2025-02-22 01:04:36,355 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 02:04:56] 2025-02-22 01:04:36,355 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 02:04:56] 2025-02-22 01:04:36,355 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 02:04:56] 2025-02-22 01:04:36,355 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 02:04:56] 2025-02-22 01:04:36,355 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 02:04:56] 2025-02-22 01:04:36,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 02:04:56] 2025-02-22 01:04:36,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 02:04:56] 2025-02-22 01:04:36,356 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 02:04:56] 2025-02-22 01:04:36,356 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 02:04:56] 2025-02-22 01:04:36,356 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 02:04:56] 2025-02-22 01:04:36,356 | INFO     | job 6520502874 has completed (purged errors)
[2025-02-22 02:04:56] 2025-02-22 01:04:36,356 | INFO     | overall cleanup function is called
[2025-02-22 02:04:56] 2025-02-22 01:04:37,361 | INFO     | --- collectZombieJob: --- 10, [1046287]
[2025-02-22 02:04:56] 2025-02-22 01:04:37,361 | INFO     | zombie collector waiting for pid 1046287
[2025-02-22 02:04:56] 2025-02-22 01:04:37,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 02:04:56] 2025-02-22 01:04:37,362 | INFO     | collected zombie processes
[2025-02-22 02:04:56] 2025-02-22 01:04:37,362 | INFO     | will attempt to kill all subprocesses of pid=1046287
[2025-02-22 02:04:56] 2025-02-22 01:04:37,502 | INFO     | process IDs to be killed: [1046287] (in reverse order)
[2025-02-22 02:04:56] 2025-02-22 01:04:37,605 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 02:04:56] 2025-02-22 01:04:37,605 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 02:04:56] 2025-02-22 01:04:37,615 | INFO     | did not find any defunct processes belonging to 1046287
[2025-02-22 02:04:56] 2025-02-22 01:04:37,623 | INFO     | did not find any defunct processes belonging to 1046287
[2025-02-22 02:04:56] 2025-02-22 01:04:37,624 | INFO     | ready for new job
[2025-02-22 02:04:56] 2025-02-22 01:04:37,624 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 02:04:56] 2025-02-22 01:04:37,626 | INFO     | **************************************
[2025-02-22 02:04:56] 2025-02-22 01:04:37,626 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 02:04:56] 2025-02-22 01:04:37,626 | INFO     | **************************************
[2025-02-22 02:04:56] 2025-02-22 01:04:37,626 | INFO     | 
[2025-02-22 02:04:56] 2025-02-22 01:04:37,630 | INFO     | architecture information:
[2025-02-22 02:04:56] 2025-02-22 01:04:37,630 | INFO     | executing command: cat /etc/os-release
[2025-02-22 02:04:56] 2025-02-22 01:04:37,645 | INFO     | cat /etc/os-release:
[2025-02-22 02:04:56] NAME="CentOS Linux"
[2025-02-22 02:04:56] VERSION="7 (Core)"
[2025-02-22 02:04:56] ID="centos"
[2025-02-22 02:04:56] ID_LIKE="rhel fedora"
[2025-02-22 02:04:56] VERSION_ID="7"
[2025-02-22 02:04:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 02:04:56] ANSI_COLOR="0;31"
[2025-02-22 02:04:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 02:04:56] HOME_URL="https://www.centos.org/"
[2025-02-22 02:04:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 02:04:56] 
[2025-02-22 02:04:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 02:04:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 02:04:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 02:04:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 02:04:56] 
[2025-02-22 02:04:56] 2025-02-22 01:04:37,645 | INFO     | **************************************
[2025-02-22 02:04:56] 2025-02-22 01:04:38,148 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2025-02-22 02:04:56] 2025-02-22 01:04:38,163 | INFO     | sufficient remaining disk space (660017774592 B)
[2025-02-22 02:04:56] 2025-02-22 01:04:38,164 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 02:04:56] 2025-02-22 01:04:38,164 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 02:04:56] 2025-02-22 01:04:38,164 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 02:04:56] 2025-02-22 01:04:38,214 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 02:04:56] 2025-02-22 01:04:38,214 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 02:04:56] 2025-02-22 01:04:38,214 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 02:04:56] 2025-02-22 01:04:38,396 | INFO     | all payload control threads have been joined
[2025-02-22 02:04:56] 2025-02-22 01:04:38,406 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 02:04:56] 2025-02-22 01:04:38,406 | INFO     | aborting loop
[2025-02-22 02:04:56] 2025-02-22 01:04:38,539 | INFO     | all job control threads have been joined
[2025-02-22 02:04:56] 2025-02-22 01:04:39,169 | INFO     | [job] retrieve thread has finished
[2025-02-22 02:04:56] 2025-02-22 01:04:39,230 | INFO     | [payload] validate_post thread has finished
[2025-02-22 02:04:56] 2025-02-22 01:04:39,258 | INFO     | all data control threads have been joined
[2025-02-22 02:04:56] 2025-02-22 01:04:39,369 | INFO     | [payload] failed_post thread has finished
[2025-02-22 02:04:56] 2025-02-22 01:04:39,395 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 02:04:56] 2025-02-22 01:04:39,402 | INFO     | [payload] control thread has finished
[2025-02-22 02:04:56] 2025-02-22 01:04:39,412 | INFO     | [job] job monitor thread has finished
[2025-02-22 02:04:56] 2025-02-22 01:04:39,541 | INFO     | [job] control thread has finished
[2025-02-22 02:04:56] 2025-02-22 01:04:39,945 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 02:04:56] 2025-02-22 01:04:40,022 | INFO     | [job] validate thread has finished
[2025-02-22 02:04:56] 2025-02-22 01:04:40,169 | INFO     | [data] copytool_out thread has finished
[2025-02-22 02:04:56] 2025-02-22 01:04:40,261 | INFO     | [data] control thread has finished
[2025-02-22 02:04:56] 2025-02-22 01:04:40,337 | INFO     | [data] copytool_in thread has finished
[2025-02-22 02:04:56] 2025-02-22 01:04:40,351 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 02:04:56] 2025-02-22 01:04:40,375 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 02:04:56] 2025-02-22 01:04:41,115 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 02:04:56] 2025-02-22 01:04:42,120 | INFO     | [job] queue monitor thread has finished
[2025-02-22 02:04:56] 2025-02-22 01:04:44,377 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 02:04:56] 2025-02-22 01:04:48,370 | INFO     | job.realtimelogging is not enabled
[2025-02-22 02:04:56] 2025-02-22 01:04:49,375 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 02:04:56] 2025-02-22 01:04:51,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22694602987328)>', '<ExcThread(monitor, started 22694368081664)>']
[2025-02-22 02:04:56] 2025-02-22 01:04:52,283 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 02:04:56] 2025-02-22 01:04:52,284 | INFO     | [monitor] control thread has ended
[2025-02-22 02:04:56] 2025-02-22 01:04:56,336 | INFO     | all workflow threads have been joined
[2025-02-22 02:04:56] 2025-02-22 01:04:56,337 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 02:04:56] 2025-02-22 01:04:56,337 | INFO     | traces error code: 0
[2025-02-22 02:04:56] 2025-02-22 01:04:56,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 02:04:56] 2025-02-22 01:04:56,462 [wrapper] ==== pilot stdout END ====
[2025-02-22 02:04:56] 2025-02-22 01:04:56,465 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 02:04:56] 2025-02-22 01:04:56,468 [wrapper] pilotpid: 1028804
[2025-02-22 02:04:56] 2025-02-22 01:04:56,471 [wrapper] Pilot exit status: 0
[2025-02-22 02:04:56] 2025-02-22 01:04:56,481 [wrapper] pandaids: 6520502874
[2025-02-22 02:04:56] 2025-02-22 01:04:56,541 [wrapper] cleanup supervisor_pilot 2009452 1028805
[2025-02-22 02:04:56] 2025-02-22 01:04:56,544 [wrapper] Test setup, not cleaning
[2025-02-22 02:04:56] 2025-02-22 01:04:56,550 [wrapper] apfmon messages muted
[2025-02-22 02:04:56] 2025-02-22 01:04:56,552 [wrapper] ==== wrapper stdout END ====
[2025-02-22 02:04:56] 2025-02-22 01:04:56,555 [wrapper] ==== wrapper stderr END ====
[2025-02-22 02:04:56]  *** Error codes and diagnostics ***
[2025-02-22 02:04:56]     "exeErrorCode": 0,
[2025-02-22 02:04:56]     "exeErrorDiag": "",
[2025-02-22 02:04:56]     "pilotErrorCode": 0,
[2025-02-22 02:04:56]     "pilotErrorDiag": "",
[2025-02-22 02:04:56]  *** Listing of results directory ***
[2025-02-22 02:04:56] total 666336
[2025-02-22 02:04:56] -rw-r--r-- 1 boinc boinc    491065 Feb 20 08:55 pilot3.tar.gz
[2025-02-22 02:04:56] -rwx------ 1 boinc boinc     35865 Feb 20 09:46 runpilot2-wrapper.sh
[2025-02-22 02:04:56] -rw-r--r-- 1 boinc boinc      5118 Feb 20 09:46 queuedata.json
[2025-02-22 02:04:56] -rw-r--r-- 1 boinc boinc       100 Feb 21 19:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 02:04:56] -rwxr-xr-x 1 boinc boinc      7986 Feb 21 19:24 run_atlas
[2025-02-22 02:04:56] -rw-r--r-- 1 boinc boinc       105 Feb 21 19:24 job.xml
[2025-02-22 02:04:56] -rw-r--r-- 1 boinc boinc      6633 Feb 21 19:24 init_data.xml
[2025-02-22 02:04:56] -rw-r--r-- 2 boinc boinc 344299215 Feb 21 19:24 EVNT.43092757._001770.pool.root.1
[2025-02-22 02:04:56] -rw-r--r-- 2 boinc boinc     17569 Feb 21 19:24 start_atlas.sh
[2025-02-22 02:04:56] drwxrwx--x 2 boinc boinc      4096 Feb 21 19:24 shared
[2025-02-22 02:04:56] -rw-r--r-- 2 boinc boinc    503558 Feb 21 19:24 input.tar.gz
[2025-02-22 02:04:56] -rw-r--r-- 1 boinc boinc         0 Feb 21 19:24 boinc_lockfile
[2025-02-22 02:04:56] -rw-r--r-- 1 boinc boinc      2548 Feb 21 19:24 pandaJob.out
[2025-02-22 02:04:56] -rw------- 1 boinc boinc       424 Feb 21 19:24 setup.sh.local
[2025-02-22 02:04:56] -rw------- 1 boinc boinc    987293 Feb 21 19:24 agis_schedconf.cvmfs.json
[2025-02-22 02:04:56] drwx------ 4 boinc boinc      4096 Feb 21 19:24 pilot3
[2025-02-22 02:04:56] -rw------- 1 boinc boinc 327873044 Feb 22 02:03 HITS.43205094._025195.pool.root.1
[2025-02-22 02:04:56] -rw-r--r-- 1 boinc boinc       531 Feb 22 02:03 boinc_task_state.xml
[2025-02-22 02:04:56] -rw------- 1 boinc boinc        95 Feb 22 02:04 pilot_heartbeat.json
[2025-02-22 02:04:56] -rw-r--r-- 1 boinc boinc        28 Feb 22 02:04 wrapper_checkpoint.txt
[2025-02-22 02:04:56] -rw------- 1 boinc boinc      1038 Feb 22 02:04 memory_monitor_summary.json
[2025-02-22 02:04:56] -rw------- 1 boinc boinc   1582569 Feb 22 02:04 agis_ddmendpoints.agis.ALL.json
[2025-02-22 02:04:56] -rw------- 1 boinc boinc    462277 Feb 22 02:04 log.43205094._025195.job.log.tgz.1
[2025-02-22 02:04:56] -rw------- 1 boinc boinc      7744 Feb 22 02:04 heartbeat.json
[2025-02-22 02:04:56] -rw-r--r-- 1 boinc boinc      8192 Feb 22 02:04 boinc_mmap_file
[2025-02-22 02:04:56] -rw------- 1 boinc boinc      4297 Feb 22 02:04 pilotlog.txt
[2025-02-22 02:04:56] -rw------- 1 boinc boinc   2708660 Feb 22 02:04 log.43205094._025195.job.log.1
[2025-02-22 02:04:56] -rw------- 1 boinc boinc       357 Feb 22 02:04 output.list
[2025-02-22 02:04:56] -rw-r--r-- 1 boinc boinc       620 Feb 22 02:04 runtime_log
[2025-02-22 02:04:56] -rw------- 1 boinc boinc   3194880 Feb 22 02:04 result.tar.gz
[2025-02-22 02:04:56] -rw------- 1 boinc boinc       665 Feb 22 02:04 v3jKDmVNH56n9Rq4apOajLDm4fhM0noT9bVoFjIUDmsgbKDmIVYv6n.diag
[2025-02-22 02:04:56] -rw-r--r-- 1 boinc boinc     11424 Feb 22 02:04 runtime_log.err
[2025-02-22 02:04:56] -rw-r--r-- 1 boinc boinc     21269 Feb 22 02:04 stderr.txt
[2025-02-22 02:04:56] HITS file was successfully produced:
[2025-02-22 02:04:56] -rw------- 1 boinc boinc 327873044 Feb 22 02:03 shared/HITS.pool.root.1
[2025-02-22 02:04:56]  *** Contents of shared directory: ***
[2025-02-22 02:04:56] total 660064
[2025-02-22 02:04:56] -rw-r--r-- 2 boinc boinc 344299215 Feb 21 19:24 ATLAS.root_0
[2025-02-22 02:04:56] -rw-r--r-- 2 boinc boinc     17569 Feb 21 19:24 start_atlas.sh
[2025-02-22 02:04:56] -rw-r--r-- 2 boinc boinc    503558 Feb 21 19:24 input.tar.gz
[2025-02-22 02:04:56] -rw------- 1 boinc boinc 327873044 Feb 22 02:03 HITS.pool.root.1
[2025-02-22 02:04:56] -rw------- 1 boinc boinc   3194880 Feb 22 02:04 result.tar.gz
02:04:57 (1024914): run_atlas exited; CPU time 91970.252291
02:04:57 (1024914): called boinc_finish(0)

</stderr_txt>
]]>

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