Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:48:23 (3027): wrapper (7.7.26015): starting
01:48:23 (3027): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 01:48:24] Arguments: --nthreads 4
[2025-02-22 01:48:24] Threads: 4
[2025-02-22 01:48:24] Checking for CVMFS
[2025-02-22 01:48:24] No cvmfs_config command found, will try listing directly
[2025-02-22 01:48:24] CVMFS is ok
[2025-02-22 01:48:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 01:48:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 01:48:24] Further information can be found at the LHC@home message board.
[2025-02-22 01:48:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 01:48:24] Checking for apptainer binary...
[2025-02-22 01:48:24] which: no apptainer in ((null))
[2025-02-22 01:48:24] apptainer is not installed, using version from CVMFS
[2025-02-22 01:48:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 01:48:24] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-02-22 01:48:24] apptainer works
[2025-02-22 01:48:24] Set ATHENA_PROC_NUMBER=4
[2025-02-22 01:48:24] Set ATHENA_CORE_NUMBER=4
[2025-02-22 01:48:24] Starting ATLAS job with PandaID=6520204571
[2025-02-22 01:48:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 07:40:55]  *** The last 200 lines of the pilot log: ***
[2025-02-22 07:40:55] 2025-02-22 06:40:35,840 | INFO     | model: linear, x: [1740185355.0, 1740185416.0, 1740185477.0, 1740185538.0, 1740185599.0, 1740185660.0, 1740185721.0, 1740185782.0, 1740185843.0, 1740185904.0, 1740
[2025-02-22 07:40:55] 2025-02-22 06:40:35,841 | INFO     | sum of square deviations: 12844082682.5
[2025-02-22 07:40:55] 2025-02-22 06:40:35,844 | INFO     | sum of deviations: 175776799252.99988
[2025-02-22 07:40:55] 2025-02-22 06:40:35,844 | INFO     | mean x: 1740195877.5
[2025-02-22 07:40:55] 2025-02-22 06:40:35,844 | INFO     | mean y: 2318860.4971098267
[2025-02-22 07:40:55] 2025-02-22 06:40:35,844 | INFO     | -- intersect: -23813010655.948914
[2025-02-22 07:40:55] 2025-02-22 06:40:35,845 | INFO     | intersect: -23813010655.948914
[2025-02-22 07:40:55] 2025-02-22 06:40:35,845 | INFO     | chi2: 5.119639881806126
[2025-02-22 07:40:55] 2025-02-22 06:40:35,845 | INFO     | model: linear, x: [1740185355.0, 1740185416.0, 1740185477.0, 1740185538.0, 1740185599.0, 1740185660.0, 1740185721.0, 1740185782.0, 1740185843.0, 1740185904.0, 1740
[2025-02-22 07:40:55] 2025-02-22 06:40:35,846 | INFO     | sum of square deviations: 12295263090.0
[2025-02-22 07:40:55] 2025-02-22 06:40:35,849 | INFO     | sum of deviations: 195170098898.0
[2025-02-22 07:40:55] 2025-02-22 06:40:35,849 | INFO     | mean x: 1740195725.0
[2025-02-22 07:40:55] 2025-02-22 06:40:35,849 | INFO     | mean y: 2324176.2170087975
[2025-02-22 07:40:55] 2025-02-22 06:40:35,849 | INFO     | -- intersect: -27620848200.33494
[2025-02-22 07:40:55] 2025-02-22 06:40:35,849 | INFO     | intersect: -27620848200.33494
[2025-02-22 07:40:55] 2025-02-22 06:40:35,849 | INFO     | chi2: 4.3177038098655
[2025-02-22 07:40:55] 2025-02-22 06:40:35,850 | INFO     | current chi2=4.3177038098655 (change=15.66391563575593 %)
[2025-02-22 07:40:55] 2025-02-22 06:40:35,850 | INFO     | right removable region: 340
[2025-02-22 07:40:55] 2025-02-22 06:40:35,850 | INFO     | model: linear, x: [1740185660.0, 1740185721.0, 1740185782.0, 1740185843.0, 1740185904.0, 1740185965.0, 1740186026.0, 1740186087.0, 1740186148.0, 1740186209.0, 1740
[2025-02-22 07:40:55] 2025-02-22 06:40:35,850 | INFO     | sum of square deviations: 12295263090.0
[2025-02-22 07:40:55] 2025-02-22 06:40:35,853 | INFO     | sum of deviations: 91118480929.0
[2025-02-22 07:40:55] 2025-02-22 06:40:35,853 | INFO     | mean x: 1740196030.0
[2025-02-22 07:40:55] 2025-02-22 06:40:35,854 | INFO     | mean y: 2342347.53372434
[2025-02-22 07:40:55] 2025-02-22 06:40:35,854 | INFO     | -- intersect: -12894007865.682943
[2025-02-22 07:40:55] 2025-02-22 06:40:35,854 | INFO     | intersect: -12894007865.682943
[2025-02-22 07:40:55] 2025-02-22 06:40:35,854 | INFO     | chi2: 2.521715016219998
[2025-02-22 07:40:55] 2025-02-22 06:40:35,854 | INFO     | current chi2=2.521715016219998 (change=50.744289160229414 %)
[2025-02-22 07:40:55] 2025-02-22 06:40:35,855 | INFO     | model: linear, x: [1740185965.0, 1740186026.0, 1740186087.0, 1740186148.0, 1740186209.0, 1740186270.0, 1740186331.0, 1740186392.0, 1740186453.0, 1740186514.0, 1740
[2025-02-22 07:40:55] 2025-02-22 06:40:35,856 | INFO     | sum of square deviations: 11762304260.0
[2025-02-22 07:40:55] 2025-02-22 06:40:35,859 | INFO     | sum of deviations: 22667854430.999985
[2025-02-22 07:40:55] 2025-02-22 06:40:35,859 | INFO     | mean x: 1740196182.5
[2025-02-22 07:40:55] 2025-02-22 06:40:35,859 | INFO     | mean y: 2361934.3035714286
[2025-02-22 07:40:55] 2025-02-22 06:40:35,859 | INFO     | -- intersect: -3351276338.805671
[2025-02-22 07:40:55] 2025-02-22 06:40:35,859 | INFO     | intersect: -3351276338.805671
[2025-02-22 07:40:55] 2025-02-22 06:40:35,859 | INFO     | chi2: 0.9569231412809542
[2025-02-22 07:40:55] 2025-02-22 06:40:35,860 | INFO     | current chi2=0.9569231412809542 (change=62.05268497328602 %)
[2025-02-22 07:40:55] 2025-02-22 06:40:35,860 | INFO     | model: linear, x: [1740186270.0, 1740186331.0, 1740186392.0, 1740186453.0, 1740186514.0, 1740186575.0, 1740186636.0, 1740186697.0, 1740186758.0, 1740186819.0, 1740
[2025-02-22 07:40:55] 2025-02-22 06:40:35,860 | INFO     | sum of square deviations: 11244973630.0
[2025-02-22 07:40:55] 2025-02-22 06:40:35,863 | INFO     | sum of deviations: 5544226804.0
[2025-02-22 07:40:55] 2025-02-22 06:40:35,863 | INFO     | mean x: 1740196335.0
[2025-02-22 07:40:55] 2025-02-22 06:40:35,863 | INFO     | mean y: 2366962.2900302117
[2025-02-22 07:40:55] 2025-02-22 06:40:35,863 | INFO     | -- intersect: -855620213.3303685
[2025-02-22 07:40:55] 2025-02-22 06:40:35,863 | INFO     | intersect: -855620213.3303685
[2025-02-22 07:40:55] 2025-02-22 06:40:35,864 | INFO     | chi2: 0.8399688351922556
[2025-02-22 07:40:55] 2025-02-22 06:40:35,864 | INFO     | current chi2=0.8399688351922556 (change=12.22191219371511 %)
[2025-02-22 07:40:55] 2025-02-22 06:40:35,864 | INFO     | left removable region: 30
[2025-02-22 07:40:55] 2025-02-22 06:40:35,864 | INFO     | model: linear, x: [1740187185.0, 1740187246.0, 1740187307.0, 1740187368.0, 1740187429.0, 1740187490.0, 1740187551.0, 1740187612.0, 1740187673.0, 1740187734.0, 1740
[2025-02-22 07:40:55] 2025-02-22 06:40:35,864 | INFO     | sum of square deviations: 9237596457.5
[2025-02-22 07:40:55] 2025-02-22 06:40:35,867 | INFO     | sum of deviations: 18230511148.5
[2025-02-22 07:40:55] 2025-02-22 06:40:35,867 | INFO     | mean x: 1740196609.5
[2025-02-22 07:40:55] 2025-02-22 06:40:35,867 | INFO     | mean y: 2375828.229032258
[2025-02-22 07:40:55] 2025-02-22 06:40:35,867 | INFO     | -- intersect: -3431923757.819069
[2025-02-22 07:40:55] 2025-02-22 06:40:35,867 | INFO     | intersect: -3431923757.819069
[2025-02-22 07:40:55] 2025-02-22 06:40:35,867 | INFO     | chi2: 0.0013759529550064504
[2025-02-22 07:40:55] 2025-02-22 06:40:35,868 | INFO     | -- intersect: -3431923757.819069
[2025-02-22 07:40:55] 2025-02-22 06:40:35,868 | INFO     | current memory leak: 1.97 B/s (using 310 data points, chi2=0.00)
[2025-02-22 07:40:55] 2025-02-22 06:40:35,868 | INFO     | ..............................
[2025-02-22 07:40:55] 2025-02-22 06:40:35,868 | INFO     | . Timing measurements:
[2025-02-22 07:40:55] 2025-02-22 06:40:35,868 | INFO     | . get job = 0 s
[2025-02-22 07:40:55] 2025-02-22 06:40:35,868 | INFO     | . initial setup = 1 s
[2025-02-22 07:40:55] 2025-02-22 06:40:35,868 | INFO     | . payload setup = 9 s
[2025-02-22 07:40:55] 2025-02-22 06:40:35,869 | INFO     | . stage-in = 0 s
[2025-02-22 07:40:55] 2025-02-22 06:40:35,869 | INFO     | . payload execution = 21075 s
[2025-02-22 07:40:55] 2025-02-22 06:40:35,869 | INFO     | . stage-out = 1 s
[2025-02-22 07:40:55] 2025-02-22 06:40:35,869 | INFO     | . log creation = 0 s
[2025-02-22 07:40:55] 2025-02-22 06:40:35,869 | INFO     | ..............................
[2025-02-22 07:40:55] 2025-02-22 06:40:36,416 | INFO     | 
[2025-02-22 07:40:55] 2025-02-22 06:40:36,419 | INFO     | job summary report
[2025-02-22 07:40:55] 2025-02-22 06:40:36,419 | INFO     | --------------------------------------------------
[2025-02-22 07:40:55] 2025-02-22 06:40:36,419 | INFO     | PanDA job id: 6520204571
[2025-02-22 07:40:55] 2025-02-22 06:40:36,419 | INFO     | task id: 43205094
[2025-02-22 07:40:55] 2025-02-22 06:40:36,419 | INFO     | errors: (none)
[2025-02-22 07:40:55] 2025-02-22 06:40:36,419 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 07:40:55] 2025-02-22 06:40:36,419 | INFO     | pilot state: finished 
[2025-02-22 07:40:55] 2025-02-22 06:40:36,420 | INFO     | transexitcode: 0
[2025-02-22 07:40:55] 2025-02-22 06:40:36,420 | INFO     | exeerrorcode: 0
[2025-02-22 07:40:55] 2025-02-22 06:40:36,420 | INFO     | exeerrordiag: 
[2025-02-22 07:40:55] 2025-02-22 06:40:36,420 | INFO     | exitcode: 0
[2025-02-22 07:40:55] 2025-02-22 06:40:36,420 | INFO     | exitmsg: OK
[2025-02-22 07:40:55] 2025-02-22 06:40:36,420 | INFO     | cpuconsumptiontime: 79603 s
[2025-02-22 07:40:55] 2025-02-22 06:40:36,420 | INFO     | nevents: 400
[2025-02-22 07:40:55] 2025-02-22 06:40:36,420 | INFO     | neventsw: 0
[2025-02-22 07:40:55] 2025-02-22 06:40:36,420 | INFO     | pid: 15373
[2025-02-22 07:40:55] 2025-02-22 06:40:36,420 | INFO     | pgrp: 15373
[2025-02-22 07:40:55] 2025-02-22 06:40:36,420 | INFO     | corecount: 4
[2025-02-22 07:40:55] 2025-02-22 06:40:36,420 | INFO     | event service: False
[2025-02-22 07:40:55] 2025-02-22 06:40:36,420 | INFO     | sizes: {0: 2383147, 1: 2383346, 8: 2383552, 11: 2383580, 21088: 2416758, 21090: 2425721, 21091: 2425905, 21098: 2426075}
[2025-02-22 07:40:55] 2025-02-22 06:40:36,421 | INFO     | --------------------------------------------------
[2025-02-22 07:40:55] 2025-02-22 06:40:36,421 | INFO     | 
[2025-02-22 07:40:55] 2025-02-22 06:40:36,421 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-02-22 07:40:55] 2025-02-22 06:40:36,449 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 07:40:55] 2025-02-22 06:40:36,450 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 07:40:55] 2025-02-22 06:40:36,450 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 07:40:55] 2025-02-22 06:40:36,450 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 07:40:55] 2025-02-22 06:40:36,450 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 07:40:55] 2025-02-22 06:40:36,450 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 07:40:55] 2025-02-22 06:40:36,450 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 07:40:55] 2025-02-22 06:40:36,450 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 07:40:55] 2025-02-22 06:40:36,450 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 07:40:55] 2025-02-22 06:40:36,450 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 07:40:55] 2025-02-22 06:40:36,450 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 07:40:55] 2025-02-22 06:40:36,450 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 07:40:55] 2025-02-22 06:40:36,451 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 07:40:55] 2025-02-22 06:40:36,451 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 07:40:55] 2025-02-22 06:40:36,451 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 07:40:55] 2025-02-22 06:40:36,451 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 07:40:55] 2025-02-22 06:40:36,451 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 07:40:55] 2025-02-22 06:40:36,451 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 07:40:55] 2025-02-22 06:40:36,451 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 07:40:55] 2025-02-22 06:40:36,451 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 07:40:55] 2025-02-22 06:40:36,451 | INFO     | job 6520204571 has completed (purged errors)
[2025-02-22 07:40:55] 2025-02-22 06:40:36,451 | INFO     | overall cleanup function is called
[2025-02-22 07:40:55] 2025-02-22 06:40:37,458 | INFO     | --- collectZombieJob: --- 10, [15373]
[2025-02-22 07:40:55] 2025-02-22 06:40:37,459 | INFO     | zombie collector waiting for pid 15373
[2025-02-22 07:40:55] 2025-02-22 06:40:37,459 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 07:40:55] 2025-02-22 06:40:37,459 | INFO     | collected zombie processes
[2025-02-22 07:40:55] 2025-02-22 06:40:37,459 | INFO     | will attempt to kill all subprocesses of pid=15373
[2025-02-22 07:40:55] 2025-02-22 06:40:37,806 | INFO     | process IDs to be killed: [15373] (in reverse order)
[2025-02-22 07:40:55] 2025-02-22 06:40:38,035 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 07:40:55] 2025-02-22 06:40:38,036 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 07:40:55] 2025-02-22 06:40:38,061 | INFO     | did not find any defunct processes belonging to 15373
[2025-02-22 07:40:55] 2025-02-22 06:40:38,080 | INFO     | did not find any defunct processes belonging to 15373
[2025-02-22 07:40:55] 2025-02-22 06:40:38,081 | INFO     | ready for new job
[2025-02-22 07:40:55] 2025-02-22 06:40:38,081 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 07:40:55] 2025-02-22 06:40:38,083 | INFO     | **************************************
[2025-02-22 07:40:55] 2025-02-22 06:40:38,084 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 07:40:55] 2025-02-22 06:40:38,084 | INFO     | **************************************
[2025-02-22 07:40:55] 2025-02-22 06:40:38,084 | INFO     | 
[2025-02-22 07:40:55] 2025-02-22 06:40:38,092 | INFO     | architecture information:
[2025-02-22 07:40:55] 2025-02-22 06:40:38,093 | INFO     | executing command: cat /etc/os-release
[2025-02-22 07:40:55] 2025-02-22 06:40:38,111 | INFO     | cat /etc/os-release:
[2025-02-22 07:40:55] NAME="CentOS Linux"
[2025-02-22 07:40:55] VERSION="7 (Core)"
[2025-02-22 07:40:55] ID="centos"
[2025-02-22 07:40:55] ID_LIKE="rhel fedora"
[2025-02-22 07:40:55] VERSION_ID="7"
[2025-02-22 07:40:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 07:40:55] ANSI_COLOR="0;31"
[2025-02-22 07:40:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 07:40:55] HOME_URL="https://www.centos.org/"
[2025-02-22 07:40:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 07:40:55] 
[2025-02-22 07:40:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 07:40:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 07:40:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 07:40:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 07:40:55] 
[2025-02-22 07:40:55] 2025-02-22 06:40:38,112 | INFO     | **************************************
[2025-02-22 07:40:55] 2025-02-22 06:40:38,615 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-02-22 07:40:55] 2025-02-22 06:40:38,640 | INFO     | sufficient remaining disk space (3229143269376 B)
[2025-02-22 07:40:55] 2025-02-22 06:40:38,640 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 07:40:55] 2025-02-22 06:40:38,640 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 07:40:55] 2025-02-22 06:40:38,641 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-22 07:40:55] 2025-02-22 06:40:38,641 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 07:40:55] 2025-02-22 06:40:38,641 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 07:40:55] 2025-02-22 06:40:38,641 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 07:40:55] 2025-02-22 06:40:38,778 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 07:40:55] 2025-02-22 06:40:38,860 | INFO     | all job control threads have been joined
[2025-02-22 07:40:55] 2025-02-22 06:40:38,994 | INFO     | all data control threads have been joined
[2025-02-22 07:40:55] 2025-02-22 06:40:39,029 | INFO     | all payload control threads have been joined
[2025-02-22 07:40:55] 2025-02-22 06:40:39,063 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-22 07:40:55] 2025-02-22 06:40:39,064 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-22 07:40:55] 2025-02-22 06:40:39,064 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 07:40:55] 2025-02-22 06:40:39,064 | INFO     | will abort loop
[2025-02-22 07:40:55] 2025-02-22 06:40:39,646 | INFO     | [job] retrieve thread has finished
[2025-02-22 07:40:55] 2025-02-22 06:40:39,851 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 07:40:55] 2025-02-22 06:40:39,866 | INFO     | [job] control thread has finished
[2025-02-22 07:40:55] 2025-02-22 06:40:39,997 | INFO     | [data] control thread has finished
[2025-02-22 07:40:55] 2025-02-22 06:40:40,034 | INFO     | [payload] control thread has finished
[2025-02-22 07:40:55] 2025-02-22 06:40:40,069 | INFO     | [job] job monitor thread has finished
[2025-02-22 07:40:55] 2025-02-22 06:40:40,105 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 07:40:55] 2025-02-22 06:40:40,175 | INFO     | [payload] validate_post thread has finished
[2025-02-22 07:40:55] 2025-02-22 06:40:40,447 | INFO     | [data] copytool_in thread has finished
[2025-02-22 07:40:55] 2025-02-22 06:40:40,456 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 07:40:55] 2025-02-22 06:40:40,775 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 07:40:55] 2025-02-22 06:40:40,779 | INFO     | [data] copytool_out thread has finished
[2025-02-22 07:40:55] 2025-02-22 06:40:40,886 | INFO     | [payload] failed_post thread has finished
[2025-02-22 07:40:55] 2025-02-22 06:40:40,967 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 07:40:55] 2025-02-22 06:40:41,018 | INFO     | [job] validate thread has finished
[2025-02-22 07:40:55] 2025-02-22 06:40:41,968 | INFO     | [job] queue monitor thread has finished
[2025-02-22 07:40:55] 2025-02-22 06:40:44,462 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 07:40:55] 2025-02-22 06:40:49,362 | INFO     | job.realtimelogging is not enabled
[2025-02-22 07:40:55] 2025-02-22 06:40:50,363 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 07:40:55] 2025-02-22 06:40:50,548 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22756251178816)>', '<ExcThread(monitor, started 22755542038272)>']
[2025-02-22 07:40:55] 2025-02-22 06:40:50,702 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 07:40:55] 2025-02-22 06:40:50,702 | INFO     | [monitor] control thread has ended
[2025-02-22 07:40:55] 2025-02-22 06:40:55,575 | INFO     | all workflow threads have been joined
[2025-02-22 07:40:55] 2025-02-22 06:40:55,575 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 07:40:55] 2025-02-22 06:40:55,575 | INFO     | traces error code: 0
[2025-02-22 07:40:55] 2025-02-22 06:40:55,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 07:40:55] 2025-02-22 06:40:55,724 [wrapper] ==== pilot stdout END ====
[2025-02-22 07:40:55] 2025-02-22 06:40:55,727 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 07:40:55] 2025-02-22 06:40:55,730 [wrapper] pilotpid: 7862
[2025-02-22 07:40:55] 2025-02-22 06:40:55,733 [wrapper] Pilot exit status: 0
[2025-02-22 07:40:55] 2025-02-22 06:40:55,744 [wrapper] pandaids: 6520204571
[2025-02-22 07:40:55] 2025-02-22 06:40:55,854 [wrapper] cleanup supervisor_pilot 1290996 7863
[2025-02-22 07:40:55] 2025-02-22 06:40:55,858 [wrapper] Test setup, not cleaning
[2025-02-22 07:40:55] 2025-02-22 06:40:55,864 [wrapper] apfmon messages muted
[2025-02-22 07:40:55] 2025-02-22 06:40:55,867 [wrapper] ==== wrapper stdout END ====
[2025-02-22 07:40:55] 2025-02-22 06:40:55,870 [wrapper] ==== wrapper stderr END ====
[2025-02-22 07:40:55]  *** Error codes and diagnostics ***
[2025-02-22 07:40:55]     "exeErrorCode": 0,
[2025-02-22 07:40:55]     "exeErrorDiag": "",
[2025-02-22 07:40:55]     "pilotErrorCode": 0,
[2025-02-22 07:40:55]     "pilotErrorDiag": "",
[2025-02-22 07:40:55]  *** Listing of results directory ***
[2025-02-22 07:40:55] total 664572
[2025-02-22 07:40:55] -rw-r--r-- 1 boinc boinc    491065 Feb 20 07:07 pilot3.tar.gz
[2025-02-22 07:40:55] -rw-r--r-- 1 boinc boinc      5118 Feb 20 07:10 queuedata.json
[2025-02-22 07:40:55] -rwx------ 1 boinc boinc     35865 Feb 20 07:12 runpilot2-wrapper.sh
[2025-02-22 07:40:55] -rw-r--r-- 1 boinc boinc       100 Feb 22 01:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 07:40:55] -rwxr-xr-x 1 boinc boinc      7986 Feb 22 01:48 run_atlas
[2025-02-22 07:40:55] -rw-r--r-- 1 boinc boinc       105 Feb 22 01:48 job.xml
[2025-02-22 07:40:55] -rw-r--r-- 1 boinc boinc      6675 Feb 22 01:48 init_data.xml
[2025-02-22 07:40:55] -rw-r--r-- 2 boinc boinc 346278138 Feb 22 01:48 EVNT.43092757._001764.pool.root.1
[2025-02-22 07:40:55] drwxrwx--x 2 boinc boinc      4096 Feb 22 01:48 shared
[2025-02-22 07:40:55] -rw-r--r-- 2 boinc boinc    503554 Feb 22 01:48 input.tar.gz
[2025-02-22 07:40:55] -rw-r--r-- 2 boinc boinc     17569 Feb 22 01:48 start_atlas.sh
[2025-02-22 07:40:55] -rw-r--r-- 1 boinc boinc         0 Feb 22 01:48 boinc_lockfile
[2025-02-22 07:40:55] -rw-r--r-- 1 boinc boinc      2545 Feb 22 01:48 pandaJob.out
[2025-02-22 07:40:55] -rw------- 1 boinc boinc       424 Feb 22 01:48 setup.sh.local
[2025-02-22 07:40:55] -rw------- 1 boinc boinc    987681 Feb 22 01:48 agis_schedconf.cvmfs.json
[2025-02-22 07:40:55] drwx------ 4 boinc boinc      4096 Feb 22 01:48 pilot3
[2025-02-22 07:40:55] -rw------- 1 boinc boinc 324981835 Feb 22 07:39 HITS.43205094._024929.pool.root.1
[2025-02-22 07:40:55] -rw-r--r-- 1 boinc boinc       532 Feb 22 07:39 boinc_task_state.xml
[2025-02-22 07:40:55] -rw------- 1 boinc boinc      1031 Feb 22 07:40 memory_monitor_summary.json
[2025-02-22 07:40:55] -rw------- 1 boinc boinc   1582569 Feb 22 07:40 agis_ddmendpoints.agis.ALL.json
[2025-02-22 07:40:55] -rw------- 1 boinc boinc    444892 Feb 22 07:40 log.43205094._024929.job.log.tgz.1
[2025-02-22 07:40:55] -rw------- 1 boinc boinc        95 Feb 22 07:40 pilot_heartbeat.json
[2025-02-22 07:40:55] -rw------- 1 boinc boinc      7701 Feb 22 07:40 heartbeat.json
[2025-02-22 07:40:55] -rw-r--r-- 1 boinc boinc      8192 Feb 22 07:40 boinc_mmap_file
[2025-02-22 07:40:55] -rw-r--r-- 1 boinc boinc        28 Feb 22 07:40 wrapper_checkpoint.txt
[2025-02-22 07:40:55] -rw------- 1 boinc boinc      4607 Feb 22 07:40 pilotlog.txt
[2025-02-22 07:40:55] -rw------- 1 boinc boinc   2284599 Feb 22 07:40 log.43205094._024929.job.log.1
[2025-02-22 07:40:55] -rw------- 1 boinc boinc       357 Feb 22 07:40 output.list
[2025-02-22 07:40:55] -rw-r--r-- 1 boinc boinc       620 Feb 22 07:40 runtime_log
[2025-02-22 07:40:55] -rw------- 1 boinc boinc   2744320 Feb 22 07:40 result.tar.gz
[2025-02-22 07:40:55] -rw-r--r-- 1 boinc boinc     11424 Feb 22 07:40 runtime_log.err
[2025-02-22 07:40:55] -rw------- 1 boinc boinc       667 Feb 22 07:40 lC0KDmjyE56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmUcpKDm0iR2Ym.diag
[2025-02-22 07:40:55] -rw-r--r-- 1 boinc boinc     21338 Feb 22 07:40 stderr.txt
[2025-02-22 07:40:55] HITS file was successfully produced:
[2025-02-22 07:40:55] -rw------- 1 boinc boinc 324981835 Feb 22 07:39 shared/HITS.pool.root.1
[2025-02-22 07:40:55]  *** Contents of shared directory: ***
[2025-02-22 07:40:55] total 658732
[2025-02-22 07:40:55] -rw-r--r-- 2 boinc boinc 346278138 Feb 22 01:48 ATLAS.root_0
[2025-02-22 07:40:55] -rw-r--r-- 2 boinc boinc    503554 Feb 22 01:48 input.tar.gz
[2025-02-22 07:40:55] -rw-r--r-- 2 boinc boinc     17569 Feb 22 01:48 start_atlas.sh
[2025-02-22 07:40:55] -rw------- 1 boinc boinc 324981835 Feb 22 07:39 HITS.pool.root.1
[2025-02-22 07:40:55] -rw------- 1 boinc boinc   2744320 Feb 22 07:40 result.tar.gz
07:40:57 (3027): run_atlas exited; CPU time 79251.223109
07:40:57 (3027): called boinc_finish(0)

</stderr_txt>
]]>

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