Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:25:29 (2102233): wrapper (7.7.26015): starting
02:25:29 (2102233): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 02:25:29] Arguments: --nthreads 4
[2025-02-22 02:25:29] Threads: 4
[2025-02-22 02:25:29] Checking for CVMFS
[2025-02-22 02:25:29] No cvmfs_config command found, will try listing directly
[2025-02-22 02:25:29] CVMFS is ok
[2025-02-22 02:25:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 02:25:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 02:25:29] Further information can be found at the LHC@home message board.
[2025-02-22 02:25:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 02:25:29] Checking for apptainer binary...
[2025-02-22 02:25:29] which: no apptainer in ((null))
[2025-02-22 02:25:29] apptainer is not installed, using version from CVMFS
[2025-02-22 02:25:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 02:25:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-02-22 02:25:29] apptainer works
[2025-02-22 02:25:29] Set ATHENA_PROC_NUMBER=4
[2025-02-22 02:25:29] Set ATHENA_CORE_NUMBER=4
[2025-02-22 02:25:29] Starting ATLAS job with PandaID=6520204045
[2025-02-22 02:25:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
06:30:29 (2506576): wrapper (7.7.26015): starting
06:30:29 (2506576): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 06:30:29] Arguments: --nthreads 4
[2025-02-22 06:30:29] Threads: 4
[2025-02-22 06:30:29] This job has been restarted, cleaning up previous attempt
[2025-02-22 06:30:29] Checking for CVMFS
[2025-02-22 06:30:29] No cvmfs_config command found, will try listing directly
[2025-02-22 06:30:29] CVMFS is ok
[2025-02-22 06:30:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 06:30:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 06:30:29] Further information can be found at the LHC@home message board.
[2025-02-22 06:30:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 06:30:29] Checking for apptainer binary...
[2025-02-22 06:30:29] which: no apptainer in ((null))
[2025-02-22 06:30:29] apptainer is not installed, using version from CVMFS
[2025-02-22 06:30:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 06:30:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-02-22 06:30:29] apptainer works
[2025-02-22 06:30:29] Set ATHENA_PROC_NUMBER=4
[2025-02-22 06:30:29] Set ATHENA_CORE_NUMBER=4
[2025-02-22 06:30:29] Starting ATLAS job with PandaID=6520204045
[2025-02-22 06:30:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 12:57:12]  *** The last 200 lines of the pilot log: ***
[2025-02-22 12:57:12] 2025-02-22 11:56:52,065 | INFO     | model: linear, x: [1740202266.0, 1740202327.0, 1740202388.0, 1740202449.0, 1740202510.0, 1740202571.0, 1740202632.0, 1740202693.0, 1740202754.0, 1740202815.0, 1740
[2025-02-22 12:57:12] 2025-02-22 11:56:52,066 | INFO     | sum of square deviations: 17014774835.0
[2025-02-22 12:57:12] 2025-02-22 11:56:52,069 | INFO     | sum of deviations: 9720536019.500015
[2025-02-22 12:57:12] 2025-02-22 11:56:52,070 | INFO     | mean x: 1740213825.5
[2025-02-22 12:57:12] 2025-02-22 11:56:52,070 | INFO     | mean y: 2378326.918421053
[2025-02-22 12:57:12] 2025-02-22 11:56:52,070 | INFO     | -- intersect: -991805336.1887884
[2025-02-22 12:57:12] 2025-02-22 11:56:52,070 | INFO     | intersect: -991805336.1887884
[2025-02-22 12:57:12] 2025-02-22 11:56:52,071 | INFO     | chi2: 4.309375370927742
[2025-02-22 12:57:12] 2025-02-22 11:56:52,071 | INFO     | model: linear, x: [1740202266.0, 1740202327.0, 1740202388.0, 1740202449.0, 1740202510.0, 1740202571.0, 1740202632.0, 1740202693.0, 1740202754.0, 1740202815.0, 1740
[2025-02-22 12:57:12] 2025-02-22 11:56:52,071 | INFO     | sum of square deviations: 16351934500.0
[2025-02-22 12:57:12] 2025-02-22 11:56:52,075 | INFO     | sum of deviations: 31900055224.99997
[2025-02-22 12:57:12] 2025-02-22 11:56:52,075 | INFO     | mean x: 1740213673.0
[2025-02-22 12:57:12] 2025-02-22 11:56:52,075 | INFO     | mean y: 2383375.141333333
[2025-02-22 12:57:12] 2025-02-22 11:56:52,075 | INFO     | -- intersect: -3392500103.1407037
[2025-02-22 12:57:12] 2025-02-22 11:56:52,075 | INFO     | intersect: -3392500103.1407037
[2025-02-22 12:57:12] 2025-02-22 11:56:52,076 | INFO     | chi2: 3.6634184143312987
[2025-02-22 12:57:12] 2025-02-22 11:56:52,076 | INFO     | current chi2=3.6634184143312987 (change=14.989572756976582 %)
[2025-02-22 12:57:12] 2025-02-22 11:56:52,076 | INFO     | right removable region: 374
[2025-02-22 12:57:12] 2025-02-22 11:56:52,076 | INFO     | model: linear, x: [1740202571.0, 1740202632.0, 1740202693.0, 1740202754.0, 1740202815.0, 1740202876.0, 1740202937.0, 1740202998.0, 1740203059.0, 1740203120.0, 1740
[2025-02-22 12:57:12] 2025-02-22 11:56:52,077 | INFO     | sum of square deviations: 16351934500.0
[2025-02-22 12:57:12] 2025-02-22 11:56:52,080 | INFO     | sum of deviations: -71994800491.00003
[2025-02-22 12:57:12] 2025-02-22 11:56:52,080 | INFO     | mean x: 1740213978.0
[2025-02-22 12:57:12] 2025-02-22 11:56:52,080 | INFO     | mean y: 2397084.709333333
[2025-02-22 12:57:12] 2025-02-22 11:56:52,081 | INFO     | -- intersect: 7664264746.774609
[2025-02-22 12:57:12] 2025-02-22 11:56:52,081 | INFO     | intersect: 7664264746.774609
[2025-02-22 12:57:12] 2025-02-22 11:56:52,081 | INFO     | chi2: 2.1759138020983224
[2025-02-22 12:57:12] 2025-02-22 11:56:52,081 | INFO     | current chi2=2.1759138020983224 (change=49.50744331121283 %)
[2025-02-22 12:57:12] 2025-02-22 11:56:52,082 | INFO     | model: linear, x: [1740202876.0, 1740202937.0, 1740202998.0, 1740203059.0, 1740203120.0, 1740203181.0, 1740203242.0, 1740203303.0, 1740203364.0, 1740203425.0, 1740
[2025-02-22 12:57:12] 2025-02-22 11:56:52,083 | INFO     | sum of square deviations: 15706536352.5
[2025-02-22 12:57:12] 2025-02-22 11:56:52,086 | INFO     | sum of deviations: -128494460038.0
[2025-02-22 12:57:12] 2025-02-22 11:56:52,086 | INFO     | mean x: 1740214130.5
[2025-02-22 12:57:12] 2025-02-22 11:56:52,086 | INFO     | mean y: 2410434.6864864863
[2025-02-22 12:57:12] 2025-02-22 11:56:52,086 | INFO     | -- intersect: 14239023143.605194
[2025-02-22 12:57:12] 2025-02-22 11:56:52,086 | INFO     | intersect: 14239023143.605194
[2025-02-22 12:57:12] 2025-02-22 11:56:52,087 | INFO     | chi2: 1.2244590545471468
[2025-02-22 12:57:12] 2025-02-22 11:56:52,087 | INFO     | current chi2=1.2244590545471468 (change=43.72667458764447 %)
[2025-02-22 12:57:12] 2025-02-22 11:56:52,087 | INFO     | model: linear, x: [1740203181.0, 1740203242.0, 1740203303.0, 1740203364.0, 1740203425.0, 1740203486.0, 1740203547.0, 1740203608.0, 1740203669.0, 1740203730.0, 1740
[2025-02-22 12:57:12] 2025-02-22 11:56:52,088 | INFO     | sum of square deviations: 15078347830.0
[2025-02-22 12:57:12] 2025-02-22 11:56:52,091 | INFO     | sum of deviations: -128053461453.0
[2025-02-22 12:57:12] 2025-02-22 11:56:52,091 | INFO     | mean x: 1740214283.0
[2025-02-22 12:57:12] 2025-02-22 11:56:52,091 | INFO     | mean y: 2410310.7095890413
[2025-02-22 12:57:12] 2025-02-22 11:56:52,091 | INFO     | -- intersect: 14781248491.159
[2025-02-22 12:57:12] 2025-02-22 11:56:52,091 | INFO     | intersect: 14781248491.159
[2025-02-22 12:57:12] 2025-02-22 11:56:52,092 | INFO     | chi2: 1.1927633417821757
[2025-02-22 12:57:12] 2025-02-22 11:56:52,092 | INFO     | current chi2=1.1927633417821757 (change=2.588548195814796 %)
[2025-02-22 12:57:12] 2025-02-22 11:56:52,092 | INFO     | left removable region: 30
[2025-02-22 12:57:12] 2025-02-22 11:56:52,092 | INFO     | model: linear, x: [1740204096.0, 1740204157.0, 1740204218.0, 1740204279.0, 1740204340.0, 1740204401.0, 1740204462.0, 1740204523.0, 1740204584.0, 1740204645.0, 1740
[2025-02-22 12:57:12] 2025-02-22 11:56:52,093 | INFO     | sum of square deviations: 12622636670.0
[2025-02-22 12:57:12] 2025-02-22 11:56:52,096 | INFO     | sum of deviations: -53673898841.0
[2025-02-22 12:57:12] 2025-02-22 11:56:52,096 | INFO     | mean x: 1740214557.5
[2025-02-22 12:57:12] 2025-02-22 11:56:52,096 | INFO     | mean y: 2402502.2093023257
[2025-02-22 12:57:12] 2025-02-22 11:56:52,096 | INFO     | -- intersect: 7402132254.621686
[2025-02-22 12:57:12] 2025-02-22 11:56:52,096 | INFO     | intersect: 7402132254.621686
[2025-02-22 12:57:12] 2025-02-22 11:56:52,097 | INFO     | chi2: 0.36718386009842463
[2025-02-22 12:57:12] 2025-02-22 11:56:52,097 | INFO     | -- intersect: 7402132254.621686
[2025-02-22 12:57:12] 2025-02-22 11:56:52,097 | INFO     | current memory leak: -4.25 B/s (using 344 data points, chi2=0.37)
[2025-02-22 12:57:12] 2025-02-22 11:56:52,098 | INFO     | ..............................
[2025-02-22 12:57:12] 2025-02-22 11:56:52,098 | INFO     | . Timing measurements:
[2025-02-22 12:57:12] 2025-02-22 11:56:52,098 | INFO     | . get job = 0 s
[2025-02-22 12:57:12] 2025-02-22 11:56:52,098 | INFO     | . initial setup = 1 s
[2025-02-22 12:57:12] 2025-02-22 11:56:52,098 | INFO     | . payload setup = 6 s
[2025-02-22 12:57:12] 2025-02-22 11:56:52,098 | INFO     | . stage-in = 0 s
[2025-02-22 12:57:12] 2025-02-22 11:56:52,098 | INFO     | . payload execution = 23136 s
[2025-02-22 12:57:12] 2025-02-22 11:56:52,098 | INFO     | . stage-out = 1 s
[2025-02-22 12:57:12] 2025-02-22 11:56:52,098 | INFO     | . log creation = 0 s
[2025-02-22 12:57:12] 2025-02-22 11:56:52,098 | INFO     | ..............................
[2025-02-22 12:57:12] 2025-02-22 11:56:52,200 | INFO     | 
[2025-02-22 12:57:12] 2025-02-22 11:56:52,200 | INFO     | job summary report
[2025-02-22 12:57:12] 2025-02-22 11:56:52,200 | INFO     | --------------------------------------------------
[2025-02-22 12:57:12] 2025-02-22 11:56:52,200 | INFO     | PanDA job id: 6520204045
[2025-02-22 12:57:12] 2025-02-22 11:56:52,200 | INFO     | task id: 43205094
[2025-02-22 12:57:12] 2025-02-22 11:56:52,201 | INFO     | errors: (none)
[2025-02-22 12:57:12] 2025-02-22 11:56:52,201 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 12:57:12] 2025-02-22 11:56:52,201 | INFO     | pilot state: finished 
[2025-02-22 12:57:12] 2025-02-22 11:56:52,201 | INFO     | transexitcode: 0
[2025-02-22 12:57:12] 2025-02-22 11:56:52,201 | INFO     | exeerrorcode: 0
[2025-02-22 12:57:12] 2025-02-22 11:56:52,201 | INFO     | exeerrordiag: 
[2025-02-22 12:57:12] 2025-02-22 11:56:52,201 | INFO     | exitcode: 0
[2025-02-22 12:57:12] 2025-02-22 11:56:52,201 | INFO     | exitmsg: OK
[2025-02-22 12:57:12] 2025-02-22 11:56:52,201 | INFO     | cpuconsumptiontime: 88696 s
[2025-02-22 12:57:12] 2025-02-22 11:56:52,201 | INFO     | nevents: 400
[2025-02-22 12:57:12] 2025-02-22 11:56:52,201 | INFO     | neventsw: 0
[2025-02-22 12:57:12] 2025-02-22 11:56:52,201 | INFO     | pid: 2517334
[2025-02-22 12:57:12] 2025-02-22 11:56:52,202 | INFO     | pgrp: 2517334
[2025-02-22 12:57:12] 2025-02-22 11:56:52,202 | INFO     | corecount: 4
[2025-02-22 12:57:12] 2025-02-22 11:56:52,202 | INFO     | event service: False
[2025-02-22 12:57:12] 2025-02-22 11:56:52,202 | INFO     | sizes: {0: 2383369, 5: 2383575, 11: 2383631, 23147: 2418195, 23148: 2418194, 23149: 2427213, 23150: 2427397, 23157: 2427567}
[2025-02-22 12:57:12] 2025-02-22 11:56:52,202 | INFO     | --------------------------------------------------
[2025-02-22 12:57:12] 2025-02-22 11:56:52,202 | INFO     | 
[2025-02-22 12:57:12] 2025-02-22 11:56:52,202 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2025-02-22 12:57:12] 2025-02-22 11:56:52,222 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 12:57:12] 2025-02-22 11:56:52,223 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 12:57:12] 2025-02-22 11:56:52,223 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 12:57:12] 2025-02-22 11:56:52,223 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 12:57:12] 2025-02-22 11:56:52,223 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 12:57:12] 2025-02-22 11:56:52,223 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 12:57:12] 2025-02-22 11:56:52,223 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 12:57:12] 2025-02-22 11:56:52,223 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 12:57:12] 2025-02-22 11:56:52,224 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 12:57:12] 2025-02-22 11:56:52,224 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 12:57:12] 2025-02-22 11:56:52,224 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 12:57:12] 2025-02-22 11:56:52,224 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 12:57:12] 2025-02-22 11:56:52,224 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 12:57:12] 2025-02-22 11:56:52,224 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 12:57:12] 2025-02-22 11:56:52,224 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 12:57:12] 2025-02-22 11:56:52,224 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 12:57:12] 2025-02-22 11:56:52,224 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 12:57:12] 2025-02-22 11:56:52,224 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 12:57:12] 2025-02-22 11:56:52,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 12:57:12] 2025-02-22 11:56:52,225 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 12:57:12] 2025-02-22 11:56:52,225 | INFO     | job 6520204045 has completed (purged errors)
[2025-02-22 12:57:12] 2025-02-22 11:56:52,225 | INFO     | overall cleanup function is called
[2025-02-22 12:57:12] 2025-02-22 11:56:53,233 | INFO     | --- collectZombieJob: --- 10, [2517334]
[2025-02-22 12:57:12] 2025-02-22 11:56:53,234 | INFO     | zombie collector waiting for pid 2517334
[2025-02-22 12:57:12] 2025-02-22 11:56:53,234 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 12:57:12] 2025-02-22 11:56:53,234 | INFO     | collected zombie processes
[2025-02-22 12:57:12] 2025-02-22 11:56:53,234 | INFO     | will attempt to kill all subprocesses of pid=2517334
[2025-02-22 12:57:12] 2025-02-22 11:56:53,382 | INFO     | process IDs to be killed: [2517334] (in reverse order)
[2025-02-22 12:57:12] 2025-02-22 11:56:53,487 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 12:57:12] 2025-02-22 11:56:53,487 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 12:57:12] 2025-02-22 11:56:53,499 | INFO     | did not find any defunct processes belonging to 2517334
[2025-02-22 12:57:12] 2025-02-22 11:56:53,511 | INFO     | did not find any defunct processes belonging to 2517334
[2025-02-22 12:57:12] 2025-02-22 11:56:53,512 | INFO     | ready for new job
[2025-02-22 12:57:12] 2025-02-22 11:56:53,512 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 12:57:12] 2025-02-22 11:56:53,515 | INFO     | **************************************
[2025-02-22 12:57:12] 2025-02-22 11:56:53,515 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 12:57:12] 2025-02-22 11:56:53,515 | INFO     | **************************************
[2025-02-22 12:57:12] 2025-02-22 11:56:53,515 | INFO     | 
[2025-02-22 12:57:12] 2025-02-22 11:56:53,520 | INFO     | architecture information:
[2025-02-22 12:57:12] 2025-02-22 11:56:53,520 | INFO     | executing command: cat /etc/os-release
[2025-02-22 12:57:12] 2025-02-22 11:56:53,536 | INFO     | cat /etc/os-release:
[2025-02-22 12:57:12] NAME="CentOS Linux"
[2025-02-22 12:57:12] VERSION="7 (Core)"
[2025-02-22 12:57:12] ID="centos"
[2025-02-22 12:57:12] ID_LIKE="rhel fedora"
[2025-02-22 12:57:12] VERSION_ID="7"
[2025-02-22 12:57:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 12:57:12] ANSI_COLOR="0;31"
[2025-02-22 12:57:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 12:57:12] HOME_URL="https://www.centos.org/"
[2025-02-22 12:57:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 12:57:12] 
[2025-02-22 12:57:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 12:57:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 12:57:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 12:57:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 12:57:12] 
[2025-02-22 12:57:12] 2025-02-22 11:56:53,537 | INFO     | **************************************
[2025-02-22 12:57:12] 2025-02-22 11:56:54,039 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2025-02-22 12:57:12] 2025-02-22 11:56:54,056 | INFO     | sufficient remaining disk space (651915427840 B)
[2025-02-22 12:57:12] 2025-02-22 11:56:54,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 12:57:12] 2025-02-22 11:56:54,056 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 12:57:12] 2025-02-22 11:56:54,057 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-22 12:57:12] 2025-02-22 11:56:54,057 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 12:57:12] 2025-02-22 11:56:54,058 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 12:57:12] 2025-02-22 11:56:54,058 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 12:57:12] 2025-02-22 11:56:54,058 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 12:57:12] 2025-02-22 11:56:54,270 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-22 12:57:12] 2025-02-22 11:56:54,271 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-22 12:57:12] 2025-02-22 11:56:54,271 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 12:57:12] 2025-02-22 11:56:54,271 | INFO     | will abort loop
[2025-02-22 12:57:12] 2025-02-22 11:56:54,547 | INFO     | all payload control threads have been joined
[2025-02-22 12:57:12] 2025-02-22 11:56:54,586 | INFO     | all data control threads have been joined
[2025-02-22 12:57:12] 2025-02-22 11:56:54,851 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 12:57:12] 2025-02-22 11:56:55,061 | INFO     | [job] queue monitor thread has finished
[2025-02-22 12:57:12] 2025-02-22 11:56:55,062 | INFO     | [job] retrieve thread has finished
[2025-02-22 12:57:12] 2025-02-22 11:56:55,099 | INFO     | all job control threads have been joined
[2025-02-22 12:57:12] 2025-02-22 11:56:55,272 | INFO     | [job] job monitor thread has finished
[2025-02-22 12:57:12] 2025-02-22 11:56:55,290 | INFO     | [job] validate thread has finished
[2025-02-22 12:57:12] 2025-02-22 11:56:55,476 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 12:57:12] 2025-02-22 11:56:55,553 | INFO     | [payload] control thread has finished
[2025-02-22 12:57:12] 2025-02-22 11:56:55,591 | INFO     | [data] control thread has finished
[2025-02-22 12:57:12] 2025-02-22 11:56:55,622 | INFO     | [payload] failed_post thread has finished
[2025-02-22 12:57:12] 2025-02-22 11:56:55,685 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 12:57:12] 2025-02-22 11:56:56,099 | INFO     | [job] control thread has finished
[2025-02-22 12:57:12] 2025-02-22 11:56:56,124 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 12:57:12] 2025-02-22 11:56:56,329 | INFO     | [payload] validate_post thread has finished
[2025-02-22 12:57:12] 2025-02-22 11:56:56,357 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 12:57:12] 2025-02-22 11:56:56,478 | INFO     | [data] copytool_in thread has finished
[2025-02-22 12:57:12] 2025-02-22 11:56:56,857 | INFO     | [data] copytool_out thread has finished
[2025-02-22 12:57:12] 2025-02-22 11:56:59,482 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 12:57:12] 2025-02-22 11:57:04,428 | INFO     | job.realtimelogging is not enabled
[2025-02-22 12:57:12] 2025-02-22 11:57:05,433 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 12:57:12] 2025-02-22 11:57:07,337 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22391305144128)>', '<ExcThread(monitor, started 22390734051072)>']
[2025-02-22 12:57:12] 2025-02-22 11:57:08,113 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 12:57:12] 2025-02-22 11:57:08,114 | INFO     | [monitor] control thread has ended
[2025-02-22 12:57:12] 2025-02-22 11:57:12,362 | INFO     | all workflow threads have been joined
[2025-02-22 12:57:12] 2025-02-22 11:57:12,362 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 12:57:12] 2025-02-22 11:57:12,363 | INFO     | traces error code: 0
[2025-02-22 12:57:12] 2025-02-22 11:57:12,363 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 12:57:12] 2025-02-22 11:57:12,526 [wrapper] ==== pilot stdout END ====
[2025-02-22 12:57:12] 2025-02-22 11:57:12,528 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 12:57:12] 2025-02-22 11:57:12,531 [wrapper] pilotpid: 2510312
[2025-02-22 12:57:12] 2025-02-22 11:57:12,533 [wrapper] Pilot exit status: 0
[2025-02-22 12:57:12] 2025-02-22 11:57:12,544 [wrapper] pandaids: 6520204045 6520204045
[2025-02-22 12:57:12] 2025-02-22 11:57:12,607 [wrapper] cleanup supervisor_pilot 3245140 2510313
[2025-02-22 12:57:12] 2025-02-22 11:57:12,610 [wrapper] Test setup, not cleaning
[2025-02-22 12:57:12] 2025-02-22 11:57:12,616 [wrapper] apfmon messages muted
[2025-02-22 12:57:12] 2025-02-22 11:57:12,618 [wrapper] ==== wrapper stdout END ====
[2025-02-22 12:57:12] 2025-02-22 11:57:12,620 [wrapper] ==== wrapper stderr END ====
[2025-02-22 12:57:12]  *** Error codes and diagnostics ***
[2025-02-22 12:57:12]     "exeErrorCode": 0,
[2025-02-22 12:57:12]     "exeErrorDiag": "",
[2025-02-22 12:57:12]     "pilotErrorCode": 0,
[2025-02-22 12:57:12]     "pilotErrorDiag": "",
[2025-02-22 12:57:12]  *** Listing of results directory ***
[2025-02-22 12:57:12] total 1008628
[2025-02-22 12:57:12] drwx------ 4 boinc boinc      4096 Dec 18 12:03 pilot3
[2025-02-22 12:57:12] -rw-r--r-- 1 boinc boinc    491065 Feb 20 06:27 pilot3.tar.gz
[2025-02-22 12:57:12] -rw-r--r-- 1 boinc boinc      5118 Feb 20 06:36 queuedata.json
[2025-02-22 12:57:12] -rwx------ 1 boinc boinc     35865 Feb 20 06:38 runpilot2-wrapper.sh
[2025-02-22 12:57:12] -rw-r--r-- 1 boinc boinc       100 Feb 22 02:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 12:57:12] -rwxr-xr-x 1 boinc boinc      7986 Feb 22 02:25 run_atlas
[2025-02-22 12:57:12] -rw-r--r-- 1 boinc boinc       105 Feb 22 02:25 job.xml
[2025-02-22 12:57:12] -rw-r--r-- 3 boinc boinc 347284125 Feb 22 02:25 EVNT.43092757._001750.pool.root.1
[2025-02-22 12:57:12] -rw-r--r-- 3 boinc boinc 347284125 Feb 22 02:25 ATLAS.root_0
[2025-02-22 12:57:12] -rw-r--r-- 2 boinc boinc     17569 Feb 22 02:25 start_atlas.sh
[2025-02-22 12:57:12] drwxrwx--x 2 boinc boinc      4096 Feb 22 02:25 shared
[2025-02-22 12:57:12] -rw-r--r-- 2 boinc boinc    503553 Feb 22 02:25 input.tar.gz
[2025-02-22 12:57:12] -rw-r--r-- 1 boinc boinc         0 Feb 22 02:25 boinc_lockfile
[2025-02-22 12:57:12] -rw-r--r-- 1 boinc boinc      2546 Feb 22 06:30 pandaJob.out
[2025-02-22 12:57:12] -rw------- 1 boinc boinc       424 Feb 22 06:30 setup.sh.local
[2025-02-22 12:57:12] -rw------- 1 boinc boinc    988041 Feb 22 06:30 agis_schedconf.cvmfs.json
[2025-02-22 12:57:12] -rw-r--r-- 1 boinc boinc      6644 Feb 22 08:26 init_data.xml
[2025-02-22 12:57:12] -rw------- 1 boinc boinc 328483002 Feb 22 12:55 HITS.43205094._024578.pool.root.1
[2025-02-22 12:57:12] -rw-r--r-- 1 boinc boinc       532 Feb 22 12:56 boinc_task_state.xml
[2025-02-22 12:57:12] -rw------- 1 boinc boinc      1036 Feb 22 12:56 memory_monitor_summary.json
[2025-02-22 12:57:12] -rw------- 1 boinc boinc   1582569 Feb 22 12:56 agis_ddmendpoints.agis.ALL.json
[2025-02-22 12:57:12] -rw------- 1 boinc boinc    465407 Feb 22 12:56 log.43205094._024578.job.log.tgz.1
[2025-02-22 12:57:12] -rw------- 1 boinc boinc      7740 Feb 22 12:56 heartbeat.json
[2025-02-22 12:57:12] -rw------- 1 boinc boinc        97 Feb 22 12:56 pilot_heartbeat.json
[2025-02-22 12:57:12] -rw-r--r-- 1 boinc boinc      8192 Feb 22 12:57 boinc_mmap_file
[2025-02-22 12:57:12] -rw-r--r-- 1 boinc boinc        29 Feb 22 12:57 wrapper_checkpoint.txt
[2025-02-22 12:57:12] -rw------- 1 boinc boinc      4606 Feb 22 12:57 pilotlog.txt
[2025-02-22 12:57:12] -rw------- 1 boinc boinc   2518256 Feb 22 12:57 log.43205094._024578.job.log.1
[2025-02-22 12:57:12] -rw------- 1 boinc boinc       357 Feb 22 12:57 output.list
[2025-02-22 12:57:12] -rw-r--r-- 1 boinc boinc       620 Feb 22 12:57 runtime_log
[2025-02-22 12:57:12] -rw------- 1 boinc boinc   3000320 Feb 22 12:57 result.tar.gz
[2025-02-22 12:57:12] -rw-r--r-- 1 boinc boinc     11501 Feb 22 12:57 runtime_log.err
[2025-02-22 12:57:12] -rw------- 1 boinc boinc       791 Feb 22 12:57 n5wNDmTRE56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm9YpKDmUQa3Gm.diag
[2025-02-22 12:57:12] -rw-r--r-- 1 boinc boinc     23288 Feb 22 12:57 stderr.txt
[2025-02-22 12:57:12] HITS file was successfully produced:
[2025-02-22 12:57:12] -rw------- 1 boinc boinc 328483002 Feb 22 12:55 shared/HITS.pool.root.1
[2025-02-22 12:57:12]  *** Contents of shared directory: ***
[2025-02-22 12:57:12] total 663388
[2025-02-22 12:57:12] -rw-r--r-- 3 boinc boinc 347284125 Feb 22 02:25 ATLAS.root_0
[2025-02-22 12:57:12] -rw-r--r-- 2 boinc boinc     17569 Feb 22 02:25 start_atlas.sh
[2025-02-22 12:57:12] -rw-r--r-- 2 boinc boinc    503553 Feb 22 02:25 input.tar.gz
[2025-02-22 12:57:12] -rw------- 1 boinc boinc 328483002 Feb 22 12:55 HITS.pool.root.1
[2025-02-22 12:57:12] -rw------- 1 boinc boinc   3000320 Feb 22 12:57 result.tar.gz
12:57:14 (2506576): run_atlas exited; CPU time 88760.132916
12:57:14 (2506576): called boinc_finish(0)

</stderr_txt>
]]>

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