Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:09:27 (2056499): wrapper (7.7.26015): starting
02:09:27 (2056499): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 02:09:27] Arguments: --nthreads 4
[2025-02-22 02:09:27] Threads: 4
[2025-02-22 02:09:27] Checking for CVMFS
[2025-02-22 02:09:27] No cvmfs_config command found, will try listing directly
[2025-02-22 02:09:27] CVMFS is ok
[2025-02-22 02:09:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 02:09:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 02:09:27] Further information can be found at the LHC@home message board.
[2025-02-22 02:09:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 02:09:27] Checking for apptainer binary...
[2025-02-22 02:09:27] which: no apptainer in ((null))
[2025-02-22 02:09:27] apptainer is not installed, using version from CVMFS
[2025-02-22 02:09:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 02:09:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-02-22 02:09:28] apptainer works
[2025-02-22 02:09:28] Set ATHENA_PROC_NUMBER=4
[2025-02-22 02:09:28] Set ATHENA_CORE_NUMBER=4
[2025-02-22 02:09:28] Starting ATLAS job with PandaID=6520204037
[2025-02-22 02:09:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
06:10:30 (2539493): wrapper (7.7.26015): starting
06:10:30 (2539493): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 06:10:30] Arguments: --nthreads 4
[2025-02-22 06:10:30] Threads: 4
[2025-02-22 06:10:30] This job has been restarted, cleaning up previous attempt
[2025-02-22 06:10:30] Checking for CVMFS
[2025-02-22 06:10:30] No cvmfs_config command found, will try listing directly
[2025-02-22 06:10:30] CVMFS is ok
[2025-02-22 06:10:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 06:10:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 06:10:30] Further information can be found at the LHC@home message board.
[2025-02-22 06:10:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 06:10:30] Checking for apptainer binary...
[2025-02-22 06:10:30] which: no apptainer in ((null))
[2025-02-22 06:10:30] apptainer is not installed, using version from CVMFS
[2025-02-22 06:10:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 06:10:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-02-22 06:10:30] apptainer works
[2025-02-22 06:10:30] Set ATHENA_PROC_NUMBER=4
[2025-02-22 06:10:30] Set ATHENA_CORE_NUMBER=4
[2025-02-22 06:10:30] Starting ATLAS job with PandaID=6520204037
[2025-02-22 06:10:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 12:43:04]  *** The last 200 lines of the pilot log: ***
[2025-02-22 12:43:04] 2025-02-22 11:42:48,744 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-22 12:43:04] 2025-02-22 11:42:48,744 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-22 12:43:04] 2025-02-22 11:42:48,752 | INFO     | fitting pss+swap vs Time
[2025-02-22 12:43:04] 2025-02-22 11:42:48,753 | INFO     | model: linear, x: [1740201070.0, 1740201131.0, 1740201192.0, 1740201253.0, 1740201314.0, 1740201375.0, 1740201436.0, 1740201497.0, 1740201558.0, 1740201619.0, 1740
[2025-02-22 12:43:04] 2025-02-22 11:42:48,753 | INFO     | sum of square deviations: 17833534372.5
[2025-02-22 12:43:04] 2025-02-22 11:42:48,757 | INFO     | sum of deviations: 93773755632.5
[2025-02-22 12:43:04] 2025-02-22 11:42:48,757 | INFO     | mean x: 1740212812.5
[2025-02-22 12:43:04] 2025-02-22 11:42:48,757 | INFO     | mean y: 2354975.582901554
[2025-02-22 12:43:04] 2025-02-22 11:42:48,757 | INFO     | -- intersect: -9148175010.192669
[2025-02-22 12:43:04] 2025-02-22 11:42:48,757 | INFO     | intersect: -9148175010.192669
[2025-02-22 12:43:04] 2025-02-22 11:42:48,758 | INFO     | chi2: 3.6250165049016267
[2025-02-22 12:43:04] 2025-02-22 11:42:48,758 | INFO     | model: linear, x: [1740201070.0, 1740201131.0, 1740201192.0, 1740201253.0, 1740201314.0, 1740201375.0, 1740201436.0, 1740201497.0, 1740201558.0, 1740201619.0, 1740
[2025-02-22 12:43:04] 2025-02-22 11:42:48,759 | INFO     | sum of square deviations: 17149456430.0
[2025-02-22 12:43:04] 2025-02-22 11:42:48,762 | INFO     | sum of deviations: 114929593638.99998
[2025-02-22 12:43:04] 2025-02-22 11:42:48,763 | INFO     | mean x: 1740212660.0
[2025-02-22 12:43:04] 2025-02-22 11:42:48,763 | INFO     | mean y: 2359639.128608924
[2025-02-22 12:43:04] 2025-02-22 11:42:48,763 | INFO     | -- intersect: -11659930339.309107
[2025-02-22 12:43:04] 2025-02-22 11:42:48,763 | INFO     | intersect: -11659930339.309107
[2025-02-22 12:43:04] 2025-02-22 11:42:48,764 | INFO     | chi2: 2.9737152018435697
[2025-02-22 12:43:04] 2025-02-22 11:42:48,764 | INFO     | current chi2=2.9737152018435697 (change=17.966850693711024 %)
[2025-02-22 12:43:04] 2025-02-22 11:42:48,764 | INFO     | right removable region: 380
[2025-02-22 12:43:04] 2025-02-22 11:42:48,764 | INFO     | model: linear, x: [1740201375.0, 1740201436.0, 1740201497.0, 1740201558.0, 1740201619.0, 1740201680.0, 1740201741.0, 1740201802.0, 1740201863.0, 1740201924.0, 1740
[2025-02-22 12:43:04] 2025-02-22 11:42:48,765 | INFO     | sum of square deviations: 17149456430.0
[2025-02-22 12:43:04] 2025-02-22 11:42:48,769 | INFO     | sum of deviations: 13572745586.0
[2025-02-22 12:43:04] 2025-02-22 11:42:48,769 | INFO     | mean x: 1740212965.0
[2025-02-22 12:43:04] 2025-02-22 11:42:48,769 | INFO     | mean y: 2372812.8818897638
[2025-02-22 12:43:04] 2025-02-22 11:42:48,769 | INFO     | -- intersect: -1374899285.2637727
[2025-02-22 12:43:04] 2025-02-22 11:42:48,769 | INFO     | intersect: -1374899285.2637727
[2025-02-22 12:43:04] 2025-02-22 11:42:48,770 | INFO     | chi2: 1.6508620487547165
[2025-02-22 12:43:04] 2025-02-22 11:42:48,770 | INFO     | current chi2=1.6508620487547165 (change=54.459185316191636 %)
[2025-02-22 12:43:04] 2025-02-22 11:42:48,770 | INFO     | model: linear, x: [1740201680.0, 1740201741.0, 1740201802.0, 1740201863.0, 1740201924.0, 1740201985.0, 1740202046.0, 1740202107.0, 1740202168.0, 1740202229.0, 1740
[2025-02-22 12:43:04] 2025-02-22 11:42:48,772 | INFO     | sum of square deviations: 16483099750.0
[2025-02-22 12:43:04] 2025-02-22 11:42:48,775 | INFO     | sum of deviations: -42359779271.0
[2025-02-22 12:43:04] 2025-02-22 11:42:48,776 | INFO     | mean x: 1740213117.5
[2025-02-22 12:43:04] 2025-02-22 11:42:48,776 | INFO     | mean y: 2385613.1329787234
[2025-02-22 12:43:04] 2025-02-22 11:42:48,776 | INFO     | -- intersect: 4474544652.381576
[2025-02-22 12:43:04] 2025-02-22 11:42:48,776 | INFO     | intersect: 4474544652.381576
[2025-02-22 12:43:04] 2025-02-22 11:42:48,777 | INFO     | chi2: 0.8022950103325874
[2025-02-22 12:43:04] 2025-02-22 11:42:48,777 | INFO     | current chi2=0.8022950103325874 (change=51.4014504762662 %)
[2025-02-22 12:43:04] 2025-02-22 11:42:48,777 | INFO     | model: linear, x: [1740201985.0, 1740202046.0, 1740202107.0, 1740202168.0, 1740202229.0, 1740202290.0, 1740202351.0, 1740202412.0, 1740202473.0, 1740202534.0, 1740
[2025-02-22 12:43:04] 2025-02-22 11:42:48,778 | INFO     | sum of square deviations: 15834231770.0
[2025-02-22 12:43:04] 2025-02-22 11:42:48,782 | INFO     | sum of deviations: -54975499029.00001
[2025-02-22 12:43:04] 2025-02-22 11:42:48,782 | INFO     | mean x: 1740213270.0
[2025-02-22 12:43:04] 2025-02-22 11:42:48,782 | INFO     | mean y: 2388567.7493261457
[2025-02-22 12:43:04] 2025-02-22 11:42:48,782 | INFO     | -- intersect: 6044304230.269525
[2025-02-22 12:43:04] 2025-02-22 11:42:48,782 | INFO     | intersect: 6044304230.269525
[2025-02-22 12:43:04] 2025-02-22 11:42:48,783 | INFO     | chi2: 0.7293387261991611
[2025-02-22 12:43:04] 2025-02-22 11:42:48,783 | INFO     | current chi2=0.7293387261991611 (change=9.09344856864842 %)
[2025-02-22 12:43:04] 2025-02-22 11:42:48,783 | INFO     | left removable region: 30
[2025-02-22 12:43:04] 2025-02-22 11:42:48,783 | INFO     | model: linear, x: [1740202900.0, 1740202961.0, 1740203022.0, 1740203083.0, 1740203144.0, 1740203205.0, 1740203266.0, 1740203327.0, 1740203388.0, 1740203449.0, 1740
[2025-02-22 12:43:04] 2025-02-22 11:42:48,784 | INFO     | sum of square deviations: 13294714387.5
[2025-02-22 12:43:04] 2025-02-22 11:42:48,787 | INFO     | sum of deviations: -23217174436.999996
[2025-02-22 12:43:04] 2025-02-22 11:42:48,787 | INFO     | mean x: 1740213544.5
[2025-02-22 12:43:04] 2025-02-22 11:42:48,787 | INFO     | mean y: 2391458.4514285713
[2025-02-22 12:43:04] 2025-02-22 11:42:48,787 | INFO     | -- intersect: 3041406832.732372
[2025-02-22 12:43:04] 2025-02-22 11:42:48,787 | INFO     | intersect: 3041406832.732372
[2025-02-22 12:43:04] 2025-02-22 11:42:48,788 | INFO     | chi2: 0.0596257181901501
[2025-02-22 12:43:04] 2025-02-22 11:42:48,788 | INFO     | -- intersect: 3041406832.732372
[2025-02-22 12:43:04] 2025-02-22 11:42:48,788 | INFO     | current memory leak: -1.75 B/s (using 350 data points, chi2=0.06)
[2025-02-22 12:43:04] 2025-02-22 11:42:48,789 | INFO     | ..............................
[2025-02-22 12:43:04] 2025-02-22 11:42:48,789 | INFO     | . Timing measurements:
[2025-02-22 12:43:04] 2025-02-22 11:42:48,789 | INFO     | . get job = 0 s
[2025-02-22 12:43:04] 2025-02-22 11:42:48,789 | INFO     | . initial setup = 1 s
[2025-02-22 12:43:04] 2025-02-22 11:42:48,790 | INFO     | . payload setup = 6 s
[2025-02-22 12:43:04] 2025-02-22 11:42:48,790 | INFO     | . stage-in = 0 s
[2025-02-22 12:43:04] 2025-02-22 11:42:48,790 | INFO     | . payload execution = 23491 s
[2025-02-22 12:43:04] 2025-02-22 11:42:48,790 | INFO     | . stage-out = 1 s
[2025-02-22 12:43:04] 2025-02-22 11:42:48,790 | INFO     | . log creation = 0 s
[2025-02-22 12:43:04] 2025-02-22 11:42:48,790 | INFO     | ..............................
[2025-02-22 12:43:04] 2025-02-22 11:42:48,907 | INFO     | 
[2025-02-22 12:43:04] 2025-02-22 11:42:48,907 | INFO     | job summary report
[2025-02-22 12:43:04] 2025-02-22 11:42:48,908 | INFO     | --------------------------------------------------
[2025-02-22 12:43:04] 2025-02-22 11:42:48,908 | INFO     | PanDA job id: 6520204037
[2025-02-22 12:43:04] 2025-02-22 11:42:48,908 | INFO     | task id: 43205094
[2025-02-22 12:43:04] 2025-02-22 11:42:48,908 | INFO     | errors: (none)
[2025-02-22 12:43:04] 2025-02-22 11:42:48,908 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 12:43:04] 2025-02-22 11:42:48,908 | INFO     | pilot state: finished 
[2025-02-22 12:43:04] 2025-02-22 11:42:48,908 | INFO     | transexitcode: 0
[2025-02-22 12:43:04] 2025-02-22 11:42:48,908 | INFO     | exeerrorcode: 0
[2025-02-22 12:43:04] 2025-02-22 11:42:48,908 | INFO     | exeerrordiag: 
[2025-02-22 12:43:04] 2025-02-22 11:42:48,908 | INFO     | exitcode: 0
[2025-02-22 12:43:04] 2025-02-22 11:42:48,909 | INFO     | exitmsg: OK
[2025-02-22 12:43:04] 2025-02-22 11:42:48,909 | INFO     | cpuconsumptiontime: 89661 s
[2025-02-22 12:43:04] 2025-02-22 11:42:48,909 | INFO     | nevents: 400
[2025-02-22 12:43:04] 2025-02-22 11:42:48,909 | INFO     | neventsw: 0
[2025-02-22 12:43:04] 2025-02-22 11:42:48,909 | INFO     | pid: 2552755
[2025-02-22 12:43:04] 2025-02-22 11:42:48,909 | INFO     | pgrp: 2552755
[2025-02-22 12:43:04] 2025-02-22 11:42:48,909 | INFO     | corecount: 4
[2025-02-22 12:43:04] 2025-02-22 11:42:48,909 | INFO     | event service: False
[2025-02-22 12:43:04] 2025-02-22 11:42:48,909 | INFO     | sizes: {0: 2383369, 5: 2383575, 11: 2383631, 23502: 2418162, 23503: 2427125, 23506: 2427181, 23511: 2427479}
[2025-02-22 12:43:04] 2025-02-22 11:42:48,909 | INFO     | --------------------------------------------------
[2025-02-22 12:43:04] 2025-02-22 11:42:48,910 | INFO     | 
[2025-02-22 12:43:04] 2025-02-22 11:42:48,910 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2025-02-22 12:43:04] 2025-02-22 11:42:48,932 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 12:43:04] 2025-02-22 11:42:48,933 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 12:43:04] 2025-02-22 11:42:48,933 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 12:43:04] 2025-02-22 11:42:48,933 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 12:43:04] 2025-02-22 11:42:48,933 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 12:43:04] 2025-02-22 11:42:48,933 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 12:43:04] 2025-02-22 11:42:48,933 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 12:43:04] 2025-02-22 11:42:48,933 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 12:43:04] 2025-02-22 11:42:48,933 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 12:43:04] 2025-02-22 11:42:48,934 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 12:43:04] 2025-02-22 11:42:48,934 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 12:43:04] 2025-02-22 11:42:48,934 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 12:43:04] 2025-02-22 11:42:48,934 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 12:43:04] 2025-02-22 11:42:48,934 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 12:43:04] 2025-02-22 11:42:48,934 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 12:43:04] 2025-02-22 11:42:48,934 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 12:43:04] 2025-02-22 11:42:48,934 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 12:43:04] 2025-02-22 11:42:48,934 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 12:43:04] 2025-02-22 11:42:48,934 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 12:43:04] 2025-02-22 11:42:48,934 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 12:43:04] 2025-02-22 11:42:48,935 | INFO     | job 6520204037 has completed (purged errors)
[2025-02-22 12:43:04] 2025-02-22 11:42:48,935 | INFO     | overall cleanup function is called
[2025-02-22 12:43:04] 2025-02-22 11:42:49,943 | INFO     | --- collectZombieJob: --- 10, [2552755]
[2025-02-22 12:43:04] 2025-02-22 11:42:49,943 | INFO     | zombie collector waiting for pid 2552755
[2025-02-22 12:43:04] 2025-02-22 11:42:49,943 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 12:43:04] 2025-02-22 11:42:49,944 | INFO     | collected zombie processes
[2025-02-22 12:43:04] 2025-02-22 11:42:49,944 | INFO     | will attempt to kill all subprocesses of pid=2552755
[2025-02-22 12:43:04] 2025-02-22 11:42:50,088 | INFO     | process IDs to be killed: [2552755] (in reverse order)
[2025-02-22 12:43:04] 2025-02-22 11:42:50,193 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 12:43:04] 2025-02-22 11:42:50,194 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 12:43:04] 2025-02-22 11:42:50,206 | INFO     | did not find any defunct processes belonging to 2552755
[2025-02-22 12:43:04] 2025-02-22 11:42:50,219 | INFO     | did not find any defunct processes belonging to 2552755
[2025-02-22 12:43:04] 2025-02-22 11:42:50,219 | INFO     | ready for new job
[2025-02-22 12:43:04] 2025-02-22 11:42:50,219 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 12:43:04] 2025-02-22 11:42:50,223 | INFO     | **************************************
[2025-02-22 12:43:04] 2025-02-22 11:42:50,223 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 12:43:04] 2025-02-22 11:42:50,223 | INFO     | **************************************
[2025-02-22 12:43:04] 2025-02-22 11:42:50,223 | INFO     | 
[2025-02-22 12:43:04] 2025-02-22 11:42:50,227 | INFO     | architecture information:
[2025-02-22 12:43:04] 2025-02-22 11:42:50,227 | INFO     | executing command: cat /etc/os-release
[2025-02-22 12:43:04] 2025-02-22 11:42:50,241 | INFO     | cat /etc/os-release:
[2025-02-22 12:43:04] NAME="CentOS Linux"
[2025-02-22 12:43:04] VERSION="7 (Core)"
[2025-02-22 12:43:04] ID="centos"
[2025-02-22 12:43:04] ID_LIKE="rhel fedora"
[2025-02-22 12:43:04] VERSION_ID="7"
[2025-02-22 12:43:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 12:43:04] ANSI_COLOR="0;31"
[2025-02-22 12:43:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 12:43:04] HOME_URL="https://www.centos.org/"
[2025-02-22 12:43:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 12:43:04] 
[2025-02-22 12:43:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 12:43:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 12:43:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 12:43:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 12:43:04] 
[2025-02-22 12:43:04] 2025-02-22 11:42:50,242 | INFO     | **************************************
[2025-02-22 12:43:04] 2025-02-22 11:42:50,744 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2025-02-22 12:43:04] 2025-02-22 11:42:50,759 | INFO     | sufficient remaining disk space (649847635968 B)
[2025-02-22 12:43:04] 2025-02-22 11:42:50,759 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 12:43:04] 2025-02-22 11:42:50,760 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 12:43:04] 2025-02-22 11:42:50,760 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-22 12:43:04] 2025-02-22 11:42:50,760 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 12:43:04] 2025-02-22 11:42:50,761 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 12:43:04] 2025-02-22 11:42:50,761 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 12:43:04] 2025-02-22 11:42:50,761 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 12:43:04] 2025-02-22 11:42:50,848 | INFO     | all job control threads have been joined
[2025-02-22 12:43:04] 2025-02-22 11:42:51,166 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 12:43:04] 2025-02-22 11:42:51,166 | INFO     | aborting loop
[2025-02-22 12:43:04] 2025-02-22 11:42:51,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 12:43:04] 2025-02-22 11:42:51,494 | INFO     | all payload control threads have been joined
[2025-02-22 12:43:04] 2025-02-22 11:42:51,765 | INFO     | [job] retrieve thread has finished
[2025-02-22 12:43:04] 2025-02-22 11:42:51,766 | INFO     | [job] queue monitor thread has finished
[2025-02-22 12:43:04] 2025-02-22 11:42:51,794 | INFO     | all data control threads have been joined
[2025-02-22 12:43:04] 2025-02-22 11:42:51,827 | INFO     | [payload] validate_post thread has finished
[2025-02-22 12:43:04] 2025-02-22 11:42:51,827 | INFO     | [payload] failed_post thread has finished
[2025-02-22 12:43:04] 2025-02-22 11:42:51,853 | INFO     | [job] control thread has finished
[2025-02-22 12:43:04] 2025-02-22 11:42:52,171 | INFO     | [job] job monitor thread has finished
[2025-02-22 12:43:04] 2025-02-22 11:42:52,324 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 12:43:04] 2025-02-22 11:42:52,499 | INFO     | [payload] control thread has finished
[2025-02-22 12:43:04] 2025-02-22 11:42:52,519 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 12:43:04] 2025-02-22 11:42:52,663 | INFO     | [job] validate thread has finished
[2025-02-22 12:43:04] 2025-02-22 11:42:52,799 | INFO     | [data] control thread has finished
[2025-02-22 12:43:04] 2025-02-22 11:42:53,001 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 12:43:04] 2025-02-22 11:42:53,078 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 12:43:04] 2025-02-22 11:42:53,256 | INFO     | [data] copytool_in thread has finished
[2025-02-22 12:43:04] 2025-02-22 11:42:53,458 | INFO     | [data] copytool_out thread has finished
[2025-02-22 12:43:04] 2025-02-22 11:42:54,080 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 12:43:04] 2025-02-22 11:42:58,086 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 12:43:04] 2025-02-22 11:42:58,854 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23039311439680)>', '<ExcThread(monitor, started 23038596720384)>']
[2025-02-22 12:43:04] 2025-02-22 11:42:59,807 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 12:43:04] 2025-02-22 11:42:59,807 | INFO     | [monitor] control thread has ended
[2025-02-22 12:43:04] 2025-02-22 11:43:03,879 | INFO     | all workflow threads have been joined
[2025-02-22 12:43:04] 2025-02-22 11:43:03,879 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 12:43:04] 2025-02-22 11:43:03,879 | INFO     | traces error code: 0
[2025-02-22 12:43:04] 2025-02-22 11:43:03,880 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 12:43:04] 2025-02-22 11:43:04,051 [wrapper] ==== pilot stdout END ====
[2025-02-22 12:43:04] 2025-02-22 11:43:04,053 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 12:43:04] 2025-02-22 11:43:04,056 [wrapper] pilotpid: 2543535
[2025-02-22 12:43:04] 2025-02-22 11:43:04,058 [wrapper] Pilot exit status: 0
[2025-02-22 12:43:04] 2025-02-22 11:43:04,067 [wrapper] pandaids: 6520204037 6520204037
[2025-02-22 12:43:04] 2025-02-22 11:43:04,126 [wrapper] cleanup supervisor_pilot 3376138 2543536
[2025-02-22 12:43:04] 2025-02-22 11:43:04,129 [wrapper] Test setup, not cleaning
[2025-02-22 12:43:04] 2025-02-22 11:43:04,134 [wrapper] apfmon messages muted
[2025-02-22 12:43:04] 2025-02-22 11:43:04,137 [wrapper] ==== wrapper stdout END ====
[2025-02-22 12:43:04] 2025-02-22 11:43:04,140 [wrapper] ==== wrapper stderr END ====
[2025-02-22 12:43:04]  *** Error codes and diagnostics ***
[2025-02-22 12:43:04]     "exeErrorCode": 0,
[2025-02-22 12:43:04]     "exeErrorDiag": "",
[2025-02-22 12:43:04]     "pilotErrorCode": 0,
[2025-02-22 12:43:04]     "pilotErrorDiag": "",
[2025-02-22 12:43:04]  *** Listing of results directory ***
[2025-02-22 12:43:04] total 1007564
[2025-02-22 12:43:04] drwx------ 4 boinc boinc      4096 Dec 18 12:03 pilot3
[2025-02-22 12:43:04] -rw-r--r-- 1 boinc boinc    491065 Feb 20 06:27 pilot3.tar.gz
[2025-02-22 12:43:04] -rw-r--r-- 1 boinc boinc      5118 Feb 20 06:36 queuedata.json
[2025-02-22 12:43:04] -rwx------ 1 boinc boinc     35865 Feb 20 06:38 runpilot2-wrapper.sh
[2025-02-22 12:43:04] -rw-r--r-- 1 boinc boinc       100 Feb 22 02:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 12:43:04] -rwxr-xr-x 1 boinc boinc      7986 Feb 22 02:09 run_atlas
[2025-02-22 12:43:04] -rw-r--r-- 1 boinc boinc       105 Feb 22 02:09 job.xml
[2025-02-22 12:43:04] -rw-r--r-- 3 boinc boinc 347284125 Feb 22 02:09 EVNT.43092757._001750.pool.root.1
[2025-02-22 12:43:04] -rw-r--r-- 3 boinc boinc 347284125 Feb 22 02:09 ATLAS.root_0
[2025-02-22 12:43:04] -rw-r--r-- 2 boinc boinc     17569 Feb 22 02:09 start_atlas.sh
[2025-02-22 12:43:04] drwxrwx--x 2 boinc boinc      4096 Feb 22 02:09 shared
[2025-02-22 12:43:04] -rw-r--r-- 2 boinc boinc    503554 Feb 22 02:09 input.tar.gz
[2025-02-22 12:43:04] -rw-r--r-- 1 boinc boinc         0 Feb 22 02:09 boinc_lockfile
[2025-02-22 12:43:04] -rw-r--r-- 1 boinc boinc      2546 Feb 22 06:10 pandaJob.out
[2025-02-22 12:43:04] -rw------- 1 boinc boinc       424 Feb 22 06:10 setup.sh.local
[2025-02-22 12:43:04] -rw------- 1 boinc boinc    987689 Feb 22 06:10 agis_schedconf.cvmfs.json
[2025-02-22 12:43:04] -rw-r--r-- 1 boinc boinc      6644 Feb 22 08:10 init_data.xml
[2025-02-22 12:43:04] -rw------- 1 boinc boinc 327258348 Feb 22 12:41 HITS.43205094._024570.pool.root.1
[2025-02-22 12:43:04] -rw------- 1 boinc boinc        97 Feb 22 12:41 pilot_heartbeat.json
[2025-02-22 12:43:04] -rw-r--r-- 1 boinc boinc       533 Feb 22 12:42 boinc_task_state.xml
[2025-02-22 12:43:04] -rw------- 1 boinc boinc      1036 Feb 22 12:42 memory_monitor_summary.json
[2025-02-22 12:43:04] -rw------- 1 boinc boinc   1582569 Feb 22 12:42 agis_ddmendpoints.agis.ALL.json
[2025-02-22 12:43:04] -rw-r--r-- 1 boinc boinc      8192 Feb 22 12:42 boinc_mmap_file
[2025-02-22 12:43:04] -rw-r--r-- 1 boinc boinc        29 Feb 22 12:42 wrapper_checkpoint.txt
[2025-02-22 12:43:04] -rw------- 1 boinc boinc    458596 Feb 22 12:42 log.43205094._024570.job.log.tgz.1
[2025-02-22 12:43:04] -rw------- 1 boinc boinc      7741 Feb 22 12:42 heartbeat.json
[2025-02-22 12:43:04] -rw------- 1 boinc boinc      4348 Feb 22 12:43 pilotlog.txt
[2025-02-22 12:43:04] -rw------- 1 boinc boinc   2592229 Feb 22 12:43 log.43205094._024570.job.log.1
[2025-02-22 12:43:04] -rw------- 1 boinc boinc       357 Feb 22 12:43 output.list
[2025-02-22 12:43:04] -rw-r--r-- 1 boinc boinc       620 Feb 22 12:43 runtime_log
[2025-02-22 12:43:04] -rw------- 1 boinc boinc   3072000 Feb 22 12:43 result.tar.gz
[2025-02-22 12:43:04] -rw-r--r-- 1 boinc boinc     11501 Feb 22 12:43 runtime_log.err
[2025-02-22 12:43:04] -rw------- 1 boinc boinc       791 Feb 22 12:43 BbCMDmTRE56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm1YpKDmKmutUo.diag
[2025-02-22 12:43:04] -rw-r--r-- 1 boinc boinc     23239 Feb 22 12:43 stderr.txt
[2025-02-22 12:43:04] HITS file was successfully produced:
[2025-02-22 12:43:04] -rw------- 1 boinc boinc 327258348 Feb 22 12:41 shared/HITS.pool.root.1
[2025-02-22 12:43:04]  *** Contents of shared directory: ***
[2025-02-22 12:43:04] total 662260
[2025-02-22 12:43:04] -rw-r--r-- 3 boinc boinc 347284125 Feb 22 02:09 ATLAS.root_0
[2025-02-22 12:43:04] -rw-r--r-- 2 boinc boinc     17569 Feb 22 02:09 start_atlas.sh
[2025-02-22 12:43:04] -rw-r--r-- 2 boinc boinc    503554 Feb 22 02:09 input.tar.gz
[2025-02-22 12:43:04] -rw------- 1 boinc boinc 327258348 Feb 22 12:41 HITS.pool.root.1
[2025-02-22 12:43:04] -rw------- 1 boinc boinc   3072000 Feb 22 12:43 result.tar.gz
12:43:06 (2539493): run_atlas exited; CPU time 89742.725675
12:43:06 (2539493): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN