Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:19:58 (4116841): wrapper (7.7.26015): starting
01:19:58 (4116841): wrapper: running run_atlas (--nthreads 4)
[2025-02-22 01:19:58] Arguments: --nthreads 4
[2025-02-22 01:19:58] Threads: 4
[2025-02-22 01:19:58] Checking for CVMFS
[2025-02-22 01:19:58] No cvmfs_config command found, will try listing directly
[2025-02-22 01:19:58] CVMFS is ok
[2025-02-22 01:19:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-22 01:19:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-22 01:19:58] Further information can be found at the LHC@home message board.
[2025-02-22 01:19:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-22 01:19:58] Checking for apptainer binary...
[2025-02-22 01:19:58] which: no apptainer in ((null))
[2025-02-22 01:19:58] apptainer is not installed, using version from CVMFS
[2025-02-22 01:19:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-22 01:19:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-02-22 01:19:58] apptainer works
[2025-02-22 01:19:58] Set ATHENA_PROC_NUMBER=4
[2025-02-22 01:19:58] Set ATHENA_CORE_NUMBER=4
[2025-02-22 01:19:58] Starting ATLAS job with PandaID=6519426990
[2025-02-22 01:19:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-22 07:36:46]  *** The last 200 lines of the pilot log: ***
[2025-02-22 07:36:46] 2025-02-22 06:36:34,095 | INFO     | model: linear, x: [1740183635.0, 1740183696.0, 1740183757.0, 1740183818.0, 1740183879.0, 1740183940.0, 1740184001.0, 1740184062.0, 1740184123.0, 1740184184.0, 1740
[2025-02-22 07:36:46] 2025-02-22 06:36:34,095 | INFO     | sum of square deviations: 15078347830.0
[2025-02-22 07:36:46] 2025-02-22 06:36:34,098 | INFO     | sum of deviations: 188000260523.99994
[2025-02-22 07:36:46] 2025-02-22 06:36:34,098 | INFO     | mean x: 1740194737.0
[2025-02-22 07:36:46] 2025-02-22 06:36:34,098 | INFO     | mean y: 2332768.7424657536
[2025-02-22 07:36:46] 2025-02-22 06:36:34,098 | INFO     | -- intersect: -21694809889.52539
[2025-02-22 07:36:46] 2025-02-22 06:36:34,098 | INFO     | intersect: -21694809889.52539
[2025-02-22 07:36:46] 2025-02-22 06:36:34,099 | INFO     | chi2: 4.12296384423988
[2025-02-22 07:36:46] 2025-02-22 06:36:34,099 | INFO     | current chi2=4.12296384423988 (change=17.149615971522472 %)
[2025-02-22 07:36:46] 2025-02-22 06:36:34,099 | INFO     | right removable region: 364
[2025-02-22 07:36:46] 2025-02-22 06:36:34,099 | INFO     | model: linear, x: [1740183940.0, 1740184001.0, 1740184062.0, 1740184123.0, 1740184184.0, 1740184245.0, 1740184306.0, 1740184367.0, 1740184428.0, 1740184489.0, 1740
[2025-02-22 07:36:46] 2025-02-22 06:36:34,100 | INFO     | sum of square deviations: 15078347830.0
[2025-02-22 07:36:46] 2025-02-22 06:36:34,103 | INFO     | sum of deviations: 77753944568.99995
[2025-02-22 07:36:46] 2025-02-22 06:36:34,103 | INFO     | mean x: 1740195042.0
[2025-02-22 07:36:46] 2025-02-22 06:36:34,103 | INFO     | mean y: 2348872.060273973
[2025-02-22 07:36:46] 2025-02-22 06:36:34,103 | INFO     | -- intersect: -8971248922.633692
[2025-02-22 07:36:46] 2025-02-22 06:36:34,104 | INFO     | intersect: -8971248922.633692
[2025-02-22 07:36:46] 2025-02-22 06:36:34,104 | INFO     | chi2: 2.500716296488475
[2025-02-22 07:36:46] 2025-02-22 06:36:34,104 | INFO     | current chi2=2.500716296488475 (change=49.74845442804522 %)
[2025-02-22 07:36:46] 2025-02-22 06:36:34,104 | INFO     | model: linear, x: [1740184245.0, 1740184306.0, 1740184367.0, 1740184428.0, 1740184489.0, 1740184550.0, 1740184611.0, 1740184672.0, 1740184733.0, 1740184794.0, 1740
[2025-02-22 07:36:46] 2025-02-22 06:36:34,105 | INFO     | sum of square deviations: 14467136370.0
[2025-02-22 07:36:46] 2025-02-22 06:36:34,107 | INFO     | sum of deviations: 5778517800.0
[2025-02-22 07:36:46] 2025-02-22 06:36:34,107 | INFO     | mean x: 1740195194.5
[2025-02-22 07:36:46] 2025-02-22 06:36:34,108 | INFO     | mean y: 2366831.211111111
[2025-02-22 07:36:46] 2025-02-22 06:36:34,108 | INFO     | -- intersect: -692708451.8106879
[2025-02-22 07:36:46] 2025-02-22 06:36:34,108 | INFO     | intersect: -692708451.8106879
[2025-02-22 07:36:46] 2025-02-22 06:36:34,108 | INFO     | chi2: 0.9864482506814221
[2025-02-22 07:36:46] 2025-02-22 06:36:34,108 | INFO     | current chi2=0.9864482506814221 (change=60.55337216514323 %)
[2025-02-22 07:36:46] 2025-02-22 06:36:34,108 | INFO     | model: linear, x: [1740184550.0, 1740184611.0, 1740184672.0, 1740184733.0, 1740184794.0, 1740184855.0, 1740184916.0, 1740184977.0, 1740185038.0, 1740185099.0, 1740
[2025-02-22 07:36:46] 2025-02-22 06:36:34,109 | INFO     | sum of square deviations: 13872669410.0
[2025-02-22 07:36:46] 2025-02-22 06:36:34,111 | INFO     | sum of deviations: -9657153146.000002
[2025-02-22 07:36:46] 2025-02-22 06:36:34,111 | INFO     | mean x: 1740195347.0
[2025-02-22 07:36:46] 2025-02-22 06:36:34,112 | INFO     | mean y: 2370771.3267605635
[2025-02-22 07:36:46] 2025-02-22 06:36:34,112 | INFO     | -- intersect: 1213769419.507739
[2025-02-22 07:36:46] 2025-02-22 06:36:34,112 | INFO     | intersect: 1213769419.507739
[2025-02-22 07:36:46] 2025-02-22 06:36:34,112 | INFO     | chi2: 0.8870640924734576
[2025-02-22 07:36:46] 2025-02-22 06:36:34,112 | INFO     | current chi2=0.8870640924734576 (change=10.074949004097428 %)
[2025-02-22 07:36:46] 2025-02-22 06:36:34,112 | INFO     | left removable region: 30
[2025-02-22 07:36:46] 2025-02-22 06:36:34,112 | INFO     | model: linear, x: [1740185465.0, 1740185526.0, 1740185587.0, 1740185648.0, 1740185709.0, 1740185770.0, 1740185831.0, 1740185892.0, 1740185953.0, 1740186014.0, 1740
[2025-02-22 07:36:46] 2025-02-22 06:36:34,113 | INFO     | sum of square deviations: 11553509647.5
[2025-02-22 07:36:46] 2025-02-22 06:36:34,115 | INFO     | sum of deviations: 10410518579.000002
[2025-02-22 07:36:46] 2025-02-22 06:36:34,115 | INFO     | mean x: 1740195621.5
[2025-02-22 07:36:46] 2025-02-22 06:36:34,115 | INFO     | mean y: 2377775.221556886
[2025-02-22 07:36:46] 2025-02-22 06:36:34,115 | INFO     | -- intersect: -1565659938.1186748
[2025-02-22 07:36:46] 2025-02-22 06:36:34,115 | INFO     | intersect: -1565659938.1186748
[2025-02-22 07:36:46] 2025-02-22 06:36:34,116 | INFO     | chi2: 0.0026462148695708073
[2025-02-22 07:36:46] 2025-02-22 06:36:34,116 | INFO     | -- intersect: -1565659938.1186748
[2025-02-22 07:36:46] 2025-02-22 06:36:34,116 | INFO     | current memory leak: 0.90 B/s (using 334 data points, chi2=0.00)
[2025-02-22 07:36:46] 2025-02-22 06:36:34,116 | INFO     | ..............................
[2025-02-22 07:36:46] 2025-02-22 06:36:34,117 | INFO     | . Timing measurements:
[2025-02-22 07:36:46] 2025-02-22 06:36:34,117 | INFO     | . get job = 0 s
[2025-02-22 07:36:46] 2025-02-22 06:36:34,117 | INFO     | . initial setup = 1 s
[2025-02-22 07:36:46] 2025-02-22 06:36:34,117 | INFO     | . payload setup = 6 s
[2025-02-22 07:36:46] 2025-02-22 06:36:34,117 | INFO     | . stage-in = 0 s
[2025-02-22 07:36:46] 2025-02-22 06:36:34,117 | INFO     | . payload execution = 22554 s
[2025-02-22 07:36:46] 2025-02-22 06:36:34,117 | INFO     | . stage-out = 1 s
[2025-02-22 07:36:46] 2025-02-22 06:36:34,117 | INFO     | . log creation = 0 s
[2025-02-22 07:36:46] 2025-02-22 06:36:34,117 | INFO     | ..............................
[2025-02-22 07:36:46] 2025-02-22 06:36:34,200 | INFO     | 
[2025-02-22 07:36:46] 2025-02-22 06:36:34,201 | INFO     | job summary report
[2025-02-22 07:36:46] 2025-02-22 06:36:34,201 | INFO     | --------------------------------------------------
[2025-02-22 07:36:46] 2025-02-22 06:36:34,201 | INFO     | PanDA job id: 6519426990
[2025-02-22 07:36:46] 2025-02-22 06:36:34,201 | INFO     | task id: 43205094
[2025-02-22 07:36:46] 2025-02-22 06:36:34,201 | INFO     | errors: (none)
[2025-02-22 07:36:46] 2025-02-22 06:36:34,201 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-22 07:36:46] 2025-02-22 06:36:34,202 | INFO     | pilot state: finished 
[2025-02-22 07:36:46] 2025-02-22 06:36:34,202 | INFO     | transexitcode: 0
[2025-02-22 07:36:46] 2025-02-22 06:36:34,202 | INFO     | exeerrorcode: 0
[2025-02-22 07:36:46] 2025-02-22 06:36:34,202 | INFO     | exeerrordiag: 
[2025-02-22 07:36:46] 2025-02-22 06:36:34,202 | INFO     | exitcode: 0
[2025-02-22 07:36:46] 2025-02-22 06:36:34,202 | INFO     | exitmsg: OK
[2025-02-22 07:36:46] 2025-02-22 06:36:34,202 | INFO     | cpuconsumptiontime: 87041 s
[2025-02-22 07:36:46] 2025-02-22 06:36:34,202 | INFO     | nevents: 400
[2025-02-22 07:36:46] 2025-02-22 06:36:34,202 | INFO     | neventsw: 0
[2025-02-22 07:36:46] 2025-02-22 06:36:34,202 | INFO     | pid: 4129355
[2025-02-22 07:36:46] 2025-02-22 06:36:34,202 | INFO     | pgrp: 4129355
[2025-02-22 07:36:46] 2025-02-22 06:36:34,202 | INFO     | corecount: 4
[2025-02-22 07:36:46] 2025-02-22 06:36:34,203 | INFO     | event service: False
[2025-02-22 07:36:46] 2025-02-22 06:36:34,203 | INFO     | sizes: {0: 2383322, 4: 2383528, 11: 2383556, 22561: 2417788, 22563: 2426807, 22571: 2426921}
[2025-02-22 07:36:46] 2025-02-22 06:36:34,203 | INFO     | --------------------------------------------------
[2025-02-22 07:36:46] 2025-02-22 06:36:34,203 | INFO     | 
[2025-02-22 07:36:46] 2025-02-22 06:36:34,203 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-02-22 07:36:46] 2025-02-22 06:36:34,229 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-22 07:36:46] 2025-02-22 06:36:34,230 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-22 07:36:46] 2025-02-22 06:36:34,230 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-22 07:36:46] 2025-02-22 06:36:34,230 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-22 07:36:46] 2025-02-22 06:36:34,230 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-22 07:36:46] 2025-02-22 06:36:34,230 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-22 07:36:46] 2025-02-22 06:36:34,230 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-22 07:36:46] 2025-02-22 06:36:34,230 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-22 07:36:46] 2025-02-22 06:36:34,230 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-22 07:36:46] 2025-02-22 06:36:34,231 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-22 07:36:46] 2025-02-22 06:36:34,231 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-22 07:36:46] 2025-02-22 06:36:34,231 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-22 07:36:46] 2025-02-22 06:36:34,231 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-22 07:36:46] 2025-02-22 06:36:34,231 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-22 07:36:46] 2025-02-22 06:36:34,231 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-22 07:36:46] 2025-02-22 06:36:34,231 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-22 07:36:46] 2025-02-22 06:36:34,231 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-22 07:36:46] 2025-02-22 06:36:34,231 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-22 07:36:46] 2025-02-22 06:36:34,231 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-22 07:36:46] 2025-02-22 06:36:34,231 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-22 07:36:46] 2025-02-22 06:36:34,232 | INFO     | job 6519426990 has completed (purged errors)
[2025-02-22 07:36:46] 2025-02-22 06:36:34,232 | INFO     | overall cleanup function is called
[2025-02-22 07:36:46] 2025-02-22 06:36:34,322 | WARNING  | process 4129355 can no longer be monitored (due to stat problems) - aborting
[2025-02-22 07:36:46] 2025-02-22 06:36:34,794 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-02-22 07:36:46] 2025-02-22 06:36:34,795 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-02-22 07:36:46] 2025-02-22 06:36:34,796 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6519426990/payload.stdout) since it has not been created yet
[2025-02-22 07:36:46] 2025-02-22 06:36:34,796 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-02-22 07:36:46] 2025-02-22 06:36:34,820 | INFO     | sufficient remaining disk space (3253591867392 B)
[2025-02-22 07:36:46] 2025-02-22 06:36:34,823 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-02-22 07:36:46] 2025-02-22 06:36:34,823 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6519426990/HITS.43205094._022134.pool.root.1 since it does not exist
[2025-02-22 07:36:46] 2025-02-22 06:36:35,155 | INFO     | number of running child processes to parent process 4129355: 1
[2025-02-22 07:36:46] 2025-02-22 06:36:35,157 | INFO     | maximum number of monitored processes: 6
[2025-02-22 07:36:46] 2025-02-22 06:36:35,157 | INFO     | aborting job monitoring since job object (job id=6519426990) has expired
[2025-02-22 07:36:46] 2025-02-22 06:36:35,241 | INFO     | --- collectZombieJob: --- 10, [4129355]
[2025-02-22 07:36:46] 2025-02-22 06:36:35,241 | INFO     | zombie collector waiting for pid 4129355
[2025-02-22 07:36:46] 2025-02-22 06:36:35,241 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-22 07:36:46] 2025-02-22 06:36:35,241 | INFO     | collected zombie processes
[2025-02-22 07:36:46] 2025-02-22 06:36:35,241 | INFO     | will attempt to kill all subprocesses of pid=4129355
[2025-02-22 07:36:46] 2025-02-22 06:36:35,579 | INFO     | process IDs to be killed: [4129355] (in reverse order)
[2025-02-22 07:36:46] 2025-02-22 06:36:35,834 | WARNING  | found no corresponding commands to process id(s)
[2025-02-22 07:36:46] 2025-02-22 06:36:35,835 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-22 07:36:46] 2025-02-22 06:36:35,859 | INFO     | did not find any defunct processes belonging to 4129355
[2025-02-22 07:36:46] 2025-02-22 06:36:35,880 | INFO     | did not find any defunct processes belonging to 4129355
[2025-02-22 07:36:46] 2025-02-22 06:36:35,881 | INFO     | ready for new job
[2025-02-22 07:36:46] 2025-02-22 06:36:35,881 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-22 07:36:46] 2025-02-22 06:36:35,884 | INFO     | **************************************
[2025-02-22 07:36:46] 2025-02-22 06:36:35,884 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-22 07:36:46] 2025-02-22 06:36:35,884 | INFO     | **************************************
[2025-02-22 07:36:46] 2025-02-22 06:36:35,884 | INFO     | 
[2025-02-22 07:36:46] 2025-02-22 06:36:35,893 | INFO     | architecture information:
[2025-02-22 07:36:46] 2025-02-22 06:36:35,893 | INFO     | executing command: cat /etc/os-release
[2025-02-22 07:36:46] 2025-02-22 06:36:35,915 | INFO     | cat /etc/os-release:
[2025-02-22 07:36:46] NAME="CentOS Linux"
[2025-02-22 07:36:46] VERSION="7 (Core)"
[2025-02-22 07:36:46] ID="centos"
[2025-02-22 07:36:46] ID_LIKE="rhel fedora"
[2025-02-22 07:36:46] VERSION_ID="7"
[2025-02-22 07:36:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-22 07:36:46] ANSI_COLOR="0;31"
[2025-02-22 07:36:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-22 07:36:46] HOME_URL="https://www.centos.org/"
[2025-02-22 07:36:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-22 07:36:46] 
[2025-02-22 07:36:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-22 07:36:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-22 07:36:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-22 07:36:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-22 07:36:46] 
[2025-02-22 07:36:46] 2025-02-22 06:36:35,916 | INFO     | **************************************
[2025-02-22 07:36:46] 2025-02-22 06:36:36,419 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-02-22 07:36:46] 2025-02-22 06:36:36,437 | INFO     | sufficient remaining disk space (3253593964544 B)
[2025-02-22 07:36:46] 2025-02-22 06:36:36,438 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-22 07:36:46] 2025-02-22 06:36:36,438 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-22 07:36:46] 2025-02-22 06:36:36,438 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-22 07:36:46] 2025-02-22 06:36:36,438 | INFO     | found 0 job(s) in 20 queues
[2025-02-22 07:36:46] 2025-02-22 06:36:36,439 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-22 07:36:46] 2025-02-22 06:36:36,439 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-22 07:36:46] 2025-02-22 06:36:36,439 | INFO     | aborting loop
[2025-02-22 07:36:46] 2025-02-22 06:36:36,440 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-22 07:36:46] 2025-02-22 06:36:36,785 | INFO     | all payload control threads have been joined
[2025-02-22 07:36:46] 2025-02-22 06:36:36,832 | INFO     | all job control threads have been joined
[2025-02-22 07:36:46] 2025-02-22 06:36:36,935 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-22 07:36:46] 2025-02-22 06:36:37,007 | INFO     | all data control threads have been joined
[2025-02-22 07:36:46] 2025-02-22 06:36:37,017 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-22 07:36:46] 2025-02-22 06:36:37,443 | INFO     | [job] retrieve thread has finished
[2025-02-22 07:36:46] 2025-02-22 06:36:37,445 | INFO     | [job] job monitor thread has finished
[2025-02-22 07:36:46] 2025-02-22 06:36:37,649 | INFO     | [payload] failed_post thread has finished
[2025-02-22 07:36:46] 2025-02-22 06:36:37,789 | INFO     | [payload] control thread has finished
[2025-02-22 07:36:46] 2025-02-22 06:36:37,837 | INFO     | [job] control thread has finished
[2025-02-22 07:36:46] 2025-02-22 06:36:37,874 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-22 07:36:46] 2025-02-22 06:36:38,013 | INFO     | [data] control thread has finished
[2025-02-22 07:36:46] 2025-02-22 06:36:38,215 | INFO     | [payload] validate_post thread has finished
[2025-02-22 07:36:46] 2025-02-22 06:36:38,311 | INFO     | [job] create_data_payload thread has finished
[2025-02-22 07:36:46] 2025-02-22 06:36:38,326 | INFO     | [data] copytool_in thread has finished
[2025-02-22 07:36:46] 2025-02-22 06:36:38,381 | INFO     | [payload] validate_pre thread has finished
[2025-02-22 07:36:46] 2025-02-22 06:36:38,448 | INFO     | [job] validate thread has finished
[2025-02-22 07:36:46] 2025-02-22 06:36:38,843 | INFO     | [payload] execute_payloads thread has finished
[2025-02-22 07:36:46] 2025-02-22 06:36:38,941 | INFO     | [data] copytool_out thread has finished
[2025-02-22 07:36:46] 2025-02-22 06:36:39,210 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-22 07:36:46] 2025-02-22 06:36:40,215 | INFO     | [job] queue monitor thread has finished
[2025-02-22 07:36:46] 2025-02-22 06:36:41,023 | INFO     | [data] queue_monitor thread has finished
[2025-02-22 07:36:46] 2025-02-22 06:36:41,198 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22590624053056)>', '<ExcThread(monitor, started 22589917361920)>']
[2025-02-22 07:36:46] 2025-02-22 06:36:41,465 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-22 07:36:46] 2025-02-22 06:36:41,465 | INFO     | [monitor] control thread has ended
[2025-02-22 07:36:46] 2025-02-22 06:36:46,203 | INFO     | all workflow threads have been joined
[2025-02-22 07:36:46] 2025-02-22 06:36:46,204 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-22 07:36:46] 2025-02-22 06:36:46,204 | INFO     | traces error code: 0
[2025-02-22 07:36:46] 2025-02-22 06:36:46,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-22 07:36:46] 2025-02-22 06:36:46,359 [wrapper] ==== pilot stdout END ====
[2025-02-22 07:36:46] 2025-02-22 06:36:46,363 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-22 07:36:46] 2025-02-22 06:36:46,367 [wrapper] pilotpid: 4121403
[2025-02-22 07:36:46] 2025-02-22 06:36:46,371 [wrapper] Pilot exit status: 0
[2025-02-22 07:36:46] 2025-02-22 06:36:46,388 [wrapper] pandaids: 6519426990
[2025-02-22 07:36:46] 2025-02-22 06:36:46,534 [wrapper] cleanup supervisor_pilot 1444609 4121404
[2025-02-22 07:36:46] 2025-02-22 06:36:46,538 [wrapper] Test setup, not cleaning
[2025-02-22 07:36:46] 2025-02-22 06:36:46,546 [wrapper] apfmon messages muted
[2025-02-22 07:36:46] 2025-02-22 06:36:46,551 [wrapper] ==== wrapper stdout END ====
[2025-02-22 07:36:46] 2025-02-22 06:36:46,554 [wrapper] ==== wrapper stderr END ====
[2025-02-22 07:36:46]  *** Error codes and diagnostics ***
[2025-02-22 07:36:46]     "exeErrorCode": 0,
[2025-02-22 07:36:46]     "exeErrorDiag": "",
[2025-02-22 07:36:46]     "pilotErrorCode": 0,
[2025-02-22 07:36:46]     "pilotErrorDiag": "",
[2025-02-22 07:36:46]  *** Listing of results directory ***
[2025-02-22 07:36:46] total 664720
[2025-02-22 07:36:46] -rw-r--r-- 1 boinc boinc      5118 Feb 19 22:24 queuedata.json
[2025-02-22 07:36:46] -rw-r--r-- 1 boinc boinc    491065 Feb 19 22:24 pilot3.tar.gz
[2025-02-22 07:36:46] -rwx------ 1 boinc boinc     35865 Feb 19 22:25 runpilot2-wrapper.sh
[2025-02-22 07:36:46] -rw-r--r-- 1 boinc boinc       100 Feb 22 01:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-22 07:36:46] -rwxr-xr-x 1 boinc boinc      7986 Feb 22 01:19 run_atlas
[2025-02-22 07:36:46] -rw-r--r-- 1 boinc boinc       105 Feb 22 01:19 job.xml
[2025-02-22 07:36:46] -rw-r--r-- 1 boinc boinc      6675 Feb 22 01:19 init_data.xml
[2025-02-22 07:36:46] -rw-r--r-- 2 boinc boinc 342414762 Feb 22 01:19 EVNT.43092757._001656.pool.root.1
[2025-02-22 07:36:46] -rw-r--r-- 2 boinc boinc     17569 Feb 22 01:19 start_atlas.sh
[2025-02-22 07:36:46] drwxrwx--x 2 boinc boinc      4096 Feb 22 01:19 shared
[2025-02-22 07:36:46] -rw-r--r-- 2 boinc boinc    503562 Feb 22 01:19 input.tar.gz
[2025-02-22 07:36:46] -rw-r--r-- 1 boinc boinc         0 Feb 22 01:19 boinc_lockfile
[2025-02-22 07:36:46] -rw-r--r-- 1 boinc boinc      2549 Feb 22 01:19 pandaJob.out
[2025-02-22 07:36:46] -rw------- 1 boinc boinc       424 Feb 22 01:19 setup.sh.local
[2025-02-22 07:36:46] -rw------- 1 boinc boinc    987681 Feb 22 01:20 agis_schedconf.cvmfs.json
[2025-02-22 07:36:46] drwx------ 4 boinc boinc      4096 Feb 22 01:20 pilot3
[2025-02-22 07:36:46] -rw------- 1 boinc boinc 328673407 Feb 22 07:35 HITS.43205094._022134.pool.root.1
[2025-02-22 07:36:46] -rw-r--r-- 1 boinc boinc       531 Feb 22 07:35 boinc_task_state.xml
[2025-02-22 07:36:46] -rw------- 1 boinc boinc      1028 Feb 22 07:36 memory_monitor_summary.json
[2025-02-22 07:36:46] -rw------- 1 boinc boinc   1582569 Feb 22 07:36 agis_ddmendpoints.agis.ALL.json
[2025-02-22 07:36:46] -rw------- 1 boinc boinc    449725 Feb 22 07:36 log.43205094._022134.job.log.tgz.1
[2025-02-22 07:36:46] -rw------- 1 boinc boinc        95 Feb 22 07:36 pilot_heartbeat.json
[2025-02-22 07:36:46] -rw------- 1 boinc boinc      7701 Feb 22 07:36 heartbeat.json
[2025-02-22 07:36:46] -rw-r--r-- 1 boinc boinc      8192 Feb 22 07:36 boinc_mmap_file
[2025-02-22 07:36:46] -rw-r--r-- 1 boinc boinc        28 Feb 22 07:36 wrapper_checkpoint.txt
[2025-02-22 07:36:46] -rw------- 1 boinc boinc      4349 Feb 22 07:36 pilotlog.txt
[2025-02-22 07:36:46] -rw------- 1 boinc boinc   2438445 Feb 22 07:36 log.43205094._022134.job.log.1
[2025-02-22 07:36:46] -rw------- 1 boinc boinc       357 Feb 22 07:36 output.list
[2025-02-22 07:36:46] -rw-r--r-- 1 boinc boinc       620 Feb 22 07:36 runtime_log
[2025-02-22 07:36:46] -rw------- 1 boinc boinc   2908160 Feb 22 07:36 result.tar.gz
[2025-02-22 07:36:46] -rw-r--r-- 1 boinc boinc     11424 Feb 22 07:36 runtime_log.err
[2025-02-22 07:36:46] -rw------- 1 boinc boinc       666 Feb 22 07:36 cp2LDmMk646n9Rq4apOajLDm4fhM0noT9bVoFjIUDms4aKDmejmISm.diag
[2025-02-22 07:36:46] -rw-r--r-- 1 boinc boinc     21755 Feb 22 07:36 stderr.txt
[2025-02-22 07:36:46] HITS file was successfully produced:
[2025-02-22 07:36:46] -rw------- 1 boinc boinc 328673407 Feb 22 07:35 shared/HITS.pool.root.1
[2025-02-22 07:36:46]  *** Contents of shared directory: ***
[2025-02-22 07:36:46] total 658724
[2025-02-22 07:36:46] -rw-r--r-- 2 boinc boinc 342414762 Feb 22 01:19 ATLAS.root_0
[2025-02-22 07:36:46] -rw-r--r-- 2 boinc boinc     17569 Feb 22 01:19 start_atlas.sh
[2025-02-22 07:36:46] -rw-r--r-- 2 boinc boinc    503562 Feb 22 01:19 input.tar.gz
[2025-02-22 07:36:46] -rw------- 1 boinc boinc 328673407 Feb 22 07:35 HITS.pool.root.1
[2025-02-22 07:36:46] -rw------- 1 boinc boinc   2908160 Feb 22 07:36 result.tar.gz
07:36:47 (4116841): run_atlas exited; CPU time 86698.892050
07:36:47 (4116841): called boinc_finish(0)

</stderr_txt>
]]>

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