Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:01:08 (1163593): wrapper (7.7.26015): starting
05:01:08 (1163593): wrapper: running run_atlas (--nthreads 4)
[2025-02-23 05:01:08] Arguments: --nthreads 4
[2025-02-23 05:01:08] Threads: 4
[2025-02-23 05:01:08] Checking for CVMFS
[2025-02-23 05:01:08] No cvmfs_config command found, will try listing directly
[2025-02-23 05:01:08] CVMFS is ok
[2025-02-23 05:01:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-23 05:01:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-23 05:01:08] Further information can be found at the LHC@home message board.
[2025-02-23 05:01:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-23 05:01:08] Checking for apptainer binary...
[2025-02-23 05:01:08] which: no apptainer in ((null))
[2025-02-23 05:01:08] apptainer is not installed, using version from CVMFS
[2025-02-23 05:01:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-23 05:01:08] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-02-23 05:01:08] apptainer works
[2025-02-23 05:01:08] Set ATHENA_PROC_NUMBER=4
[2025-02-23 05:01:08] Set ATHENA_CORE_NUMBER=4
[2025-02-23 05:01:08] Starting ATLAS job with PandaID=6519369630
[2025-02-23 05:01:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-23 11:31:07]  *** The last 200 lines of the pilot log: ***
[2025-02-23 11:31:07] 2025-02-23 10:30:47,729 | INFO     | mean x: 1740294959.0
[2025-02-23 11:31:07] 2025-02-23 10:30:47,729 | INFO     | mean y: 2330879.678851175
[2025-02-23 11:31:07] 2025-02-23 10:30:47,729 | INFO     | -- intersect: -19037757956.60585
[2025-02-23 11:31:07] 2025-02-23 10:30:47,729 | INFO     | intersect: -19037757956.60585
[2025-02-23 11:31:07] 2025-02-23 10:30:47,730 | INFO     | chi2: 4.995305805524172
[2025-02-23 11:31:07] 2025-02-23 10:30:47,730 | INFO     | model: linear, x: [1740283308.0, 1740283369.0, 1740283430.0, 1740283491.0, 1740283552.0, 1740283613.0, 1740283674.0, 1740283735.0, 1740283796.0, 1740283857.0, 1740
[2025-02-23 11:31:07] 2025-02-23 10:30:47,731 | INFO     | sum of square deviations: 16747530754.5
[2025-02-23 11:31:07] 2025-02-23 10:30:47,734 | INFO     | sum of deviations: 212265151867.99997
[2025-02-23 11:31:07] 2025-02-23 10:30:47,734 | INFO     | mean x: 1740294806.5
[2025-02-23 11:31:07] 2025-02-23 10:30:47,734 | INFO     | mean y: 2335727.4497354496
[2025-02-23 11:31:07] 2025-02-23 10:30:47,734 | INFO     | -- intersect: -22054882546.208706
[2025-02-23 11:31:07] 2025-02-23 10:30:47,734 | INFO     | intersect: -22054882546.208706
[2025-02-23 11:31:07] 2025-02-23 10:30:47,735 | INFO     | chi2: 4.210943315581008
[2025-02-23 11:31:07] 2025-02-23 10:30:47,735 | INFO     | current chi2=4.210943315581008 (change=15.70199143915792 %)
[2025-02-23 11:31:07] 2025-02-23 10:30:47,735 | INFO     | right removable region: 377
[2025-02-23 11:31:07] 2025-02-23 10:30:47,736 | INFO     | model: linear, x: [1740283613.0, 1740283674.0, 1740283735.0, 1740283796.0, 1740283857.0, 1740283918.0, 1740283979.0, 1740284040.0, 1740284101.0, 1740284162.0, 1740
[2025-02-23 11:31:07] 2025-02-23 10:30:47,736 | INFO     | sum of square deviations: 16747530754.5
[2025-02-23 11:31:07] 2025-02-23 10:30:47,739 | INFO     | sum of deviations: 97283313772.49998
[2025-02-23 11:31:07] 2025-02-23 10:30:47,740 | INFO     | mean x: 1740295111.5
[2025-02-23 11:31:07] 2025-02-23 10:30:47,740 | INFO     | mean y: 2351979.8174603176
[2025-02-23 11:31:07] 2025-02-23 10:30:47,740 | INFO     | -- intersect: -10106700982.71026
[2025-02-23 11:31:07] 2025-02-23 10:30:47,740 | INFO     | intersect: -10106700982.71026
[2025-02-23 11:31:07] 2025-02-23 10:30:47,740 | INFO     | chi2: 2.4386247082050074
[2025-02-23 11:31:07] 2025-02-23 10:30:47,741 | INFO     | current chi2=2.4386247082050074 (change=51.18167329198947 %)
[2025-02-23 11:31:07] 2025-02-23 10:30:47,741 | INFO     | model: linear, x: [1740283918.0, 1740283979.0, 1740284040.0, 1740284101.0, 1740284162.0, 1740284223.0, 1740284284.0, 1740284345.0, 1740284406.0, 1740284467.0, 1740
[2025-02-23 11:31:07] 2025-02-23 10:30:47,741 | INFO     | sum of square deviations: 16091695202.0
[2025-02-23 11:31:07] 2025-02-23 10:30:47,745 | INFO     | sum of deviations: 22529529306.000004
[2025-02-23 11:31:07] 2025-02-23 10:30:47,745 | INFO     | mean x: 1740295264.0
[2025-02-23 11:31:07] 2025-02-23 10:30:47,745 | INFO     | mean y: 2369362.2815013407
[2025-02-23 11:31:07] 2025-02-23 10:30:47,745 | INFO     | -- intersect: -2434169029.6778455
[2025-02-23 11:31:07] 2025-02-23 10:30:47,745 | INFO     | intersect: -2434169029.6778455
[2025-02-23 11:31:07] 2025-02-23 10:30:47,746 | INFO     | chi2: 0.9302529094379794
[2025-02-23 11:31:07] 2025-02-23 10:30:47,746 | INFO     | current chi2=0.9302529094379794 (change=61.85337964025188 %)
[2025-02-23 11:31:07] 2025-02-23 10:30:47,746 | INFO     | model: linear, x: [1740284223.0, 1740284284.0, 1740284345.0, 1740284406.0, 1740284467.0, 1740284528.0, 1740284589.0, 1740284650.0, 1740284711.0, 1740284772.0, 1740
[2025-02-23 11:31:07] 2025-02-23 10:30:47,747 | INFO     | sum of square deviations: 15453208812.0
[2025-02-23 11:31:07] 2025-02-23 10:30:47,750 | INFO     | sum of deviations: 3434787206.999996
[2025-02-23 11:31:07] 2025-02-23 10:30:47,750 | INFO     | mean x: 1740295416.5
[2025-02-23 11:31:07] 2025-02-23 10:30:47,750 | INFO     | mean y: 2373906.5489130435
[2025-02-23 11:31:07] 2025-02-23 10:30:47,750 | INFO     | -- intersect: -384441835.4575718
[2025-02-23 11:31:07] 2025-02-23 10:30:47,751 | INFO     | intersect: -384441835.4575718
[2025-02-23 11:31:07] 2025-02-23 10:30:47,751 | INFO     | chi2: 0.8127482362303026
[2025-02-23 11:31:07] 2025-02-23 10:30:47,751 | INFO     | current chi2=0.8127482362303026 (change=12.631476022866552 %)
[2025-02-23 11:31:07] 2025-02-23 10:30:47,751 | INFO     | left removable region: 30
[2025-02-23 11:31:07] 2025-02-23 10:30:47,752 | INFO     | model: linear, x: [1740285138.0, 1740285199.0, 1740285260.0, 1740285321.0, 1740285382.0, 1740285443.0, 1740285504.0, 1740285565.0, 1740285626.0, 1740285687.0, 1740
[2025-02-23 11:31:07] 2025-02-23 10:30:47,752 | INFO     | sum of square deviations: 12955770358.0
[2025-02-23 11:31:07] 2025-02-23 10:30:47,755 | INFO     | sum of deviations: 21984002463.0
[2025-02-23 11:31:07] 2025-02-23 10:30:47,755 | INFO     | mean x: 1740295691.0
[2025-02-23 11:31:07] 2025-02-23 10:30:47,755 | INFO     | mean y: 2380697.5792507203
[2025-02-23 11:31:07] 2025-02-23 10:30:47,755 | INFO     | -- intersect: -2950640520.002621
[2025-02-23 11:31:07] 2025-02-23 10:30:47,755 | INFO     | intersect: -2950640520.002621
[2025-02-23 11:31:07] 2025-02-23 10:30:47,756 | INFO     | chi2: 0.0015511163750394357
[2025-02-23 11:31:07] 2025-02-23 10:30:47,756 | INFO     | -- intersect: -2950640520.002621
[2025-02-23 11:31:07] 2025-02-23 10:30:47,756 | INFO     | current memory leak: 1.70 B/s (using 347 data points, chi2=0.00)
[2025-02-23 11:31:07] 2025-02-23 10:30:47,757 | INFO     | ..............................
[2025-02-23 11:31:07] 2025-02-23 10:30:47,757 | INFO     | . Timing measurements:
[2025-02-23 11:31:07] 2025-02-23 10:30:47,757 | INFO     | . get job = 0 s
[2025-02-23 11:31:07] 2025-02-23 10:30:47,757 | INFO     | . initial setup = 1 s
[2025-02-23 11:31:07] 2025-02-23 10:30:47,757 | INFO     | . payload setup = 6 s
[2025-02-23 11:31:07] 2025-02-23 10:30:47,757 | INFO     | . stage-in = 0 s
[2025-02-23 11:31:07] 2025-02-23 10:30:47,757 | INFO     | . payload execution = 23333 s
[2025-02-23 11:31:07] 2025-02-23 10:30:47,758 | INFO     | . stage-out = 1 s
[2025-02-23 11:31:07] 2025-02-23 10:30:47,758 | INFO     | . log creation = 0 s
[2025-02-23 11:31:07] 2025-02-23 10:30:47,758 | INFO     | ..............................
[2025-02-23 11:31:07] 2025-02-23 10:30:47,854 | INFO     | 
[2025-02-23 11:31:07] 2025-02-23 10:30:47,854 | INFO     | job summary report
[2025-02-23 11:31:07] 2025-02-23 10:30:47,854 | INFO     | --------------------------------------------------
[2025-02-23 11:31:07] 2025-02-23 10:30:47,854 | INFO     | PanDA job id: 6519369630
[2025-02-23 11:31:07] 2025-02-23 10:30:47,854 | INFO     | task id: 43078919
[2025-02-23 11:31:07] 2025-02-23 10:30:47,854 | INFO     | errors: (none)
[2025-02-23 11:31:07] 2025-02-23 10:30:47,855 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-23 11:31:07] 2025-02-23 10:30:47,855 | INFO     | pilot state: finished 
[2025-02-23 11:31:07] 2025-02-23 10:30:47,855 | INFO     | transexitcode: 0
[2025-02-23 11:31:07] 2025-02-23 10:30:47,855 | INFO     | exeerrorcode: 0
[2025-02-23 11:31:07] 2025-02-23 10:30:47,855 | INFO     | exeerrordiag: 
[2025-02-23 11:31:07] 2025-02-23 10:30:47,855 | INFO     | exitcode: 0
[2025-02-23 11:31:07] 2025-02-23 10:30:47,855 | INFO     | exitmsg: OK
[2025-02-23 11:31:07] 2025-02-23 10:30:47,855 | INFO     | cpuconsumptiontime: 89761 s
[2025-02-23 11:31:07] 2025-02-23 10:30:47,855 | INFO     | nevents: 400
[2025-02-23 11:31:07] 2025-02-23 10:30:47,855 | INFO     | neventsw: 0
[2025-02-23 11:31:07] 2025-02-23 10:30:47,855 | INFO     | pid: 1185348
[2025-02-23 11:31:07] 2025-02-23 10:30:47,856 | INFO     | pgrp: 1185348
[2025-02-23 11:31:07] 2025-02-23 10:30:47,856 | INFO     | corecount: 4
[2025-02-23 11:31:07] 2025-02-23 10:30:47,856 | INFO     | event service: False
[2025-02-23 11:31:07] 2025-02-23 10:30:47,856 | INFO     | sizes: {0: 2383230, 1: 2383429, 5: 2383635, 12: 2383663, 23343: 2418297, 23345: 2427444, 23351: 2427558}
[2025-02-23 11:31:07] 2025-02-23 10:30:47,856 | INFO     | --------------------------------------------------
[2025-02-23 11:31:07] 2025-02-23 10:30:47,856 | INFO     | 
[2025-02-23 11:31:07] 2025-02-23 10:30:47,856 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-02-23 11:31:07] 2025-02-23 10:30:47,865 | WARNING  | process 1185348 can no longer be monitored (due to stat problems) - aborting
[2025-02-23 11:31:07] 2025-02-23 10:30:47,872 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6519369630/memory_monitor_summary.json (trf name=prmon)
[2025-02-23 11:31:07] 2025-02-23 10:30:47,885 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-23 11:31:07] 2025-02-23 10:30:47,886 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-23 11:31:07] 2025-02-23 10:30:47,886 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-23 11:31:07] 2025-02-23 10:30:47,886 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-23 11:31:07] 2025-02-23 10:30:47,886 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-23 11:31:07] 2025-02-23 10:30:47,886 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-23 11:31:07] 2025-02-23 10:30:47,886 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-23 11:31:07] 2025-02-23 10:30:47,886 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-23 11:31:07] 2025-02-23 10:30:47,886 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-23 11:31:07] 2025-02-23 10:30:47,886 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-23 11:31:07] 2025-02-23 10:30:47,887 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-23 11:31:07] 2025-02-23 10:30:47,887 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-23 11:31:07] 2025-02-23 10:30:47,887 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-23 11:31:07] 2025-02-23 10:30:47,887 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-23 11:31:07] 2025-02-23 10:30:47,887 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-23 11:31:07] 2025-02-23 10:30:47,887 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-23 11:31:07] 2025-02-23 10:30:47,887 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-23 11:31:07] 2025-02-23 10:30:47,887 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-23 11:31:07] 2025-02-23 10:30:47,887 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-23 11:31:07] 2025-02-23 10:30:47,887 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-23 11:31:07] 2025-02-23 10:30:47,888 | INFO     | job 6519369630 has completed (purged errors)
[2025-02-23 11:31:07] 2025-02-23 10:30:47,888 | INFO     | overall cleanup function is called
[2025-02-23 11:31:07] 2025-02-23 10:30:48,034 | INFO     | number of running child processes to parent process 1185348: 1
[2025-02-23 11:31:07] 2025-02-23 10:30:48,035 | INFO     | maximum number of monitored processes: 6
[2025-02-23 11:31:07] 2025-02-23 10:30:48,035 | INFO     | aborting job monitoring since job object (job id=6519369630) has expired
[2025-02-23 11:31:07] 2025-02-23 10:30:48,896 | INFO     | --- collectZombieJob: --- 10, [1185348]
[2025-02-23 11:31:07] 2025-02-23 10:30:48,896 | INFO     | zombie collector waiting for pid 1185348
[2025-02-23 11:31:07] 2025-02-23 10:30:48,896 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-23 11:31:07] 2025-02-23 10:30:48,896 | INFO     | collected zombie processes
[2025-02-23 11:31:07] 2025-02-23 10:30:48,897 | INFO     | will attempt to kill all subprocesses of pid=1185348
[2025-02-23 11:31:07] 2025-02-23 10:30:49,051 | INFO     | process IDs to be killed: [1185348] (in reverse order)
[2025-02-23 11:31:07] 2025-02-23 10:30:49,160 | WARNING  | found no corresponding commands to process id(s)
[2025-02-23 11:31:07] 2025-02-23 10:30:49,160 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-23 11:31:07] 2025-02-23 10:30:49,171 | INFO     | did not find any defunct processes belonging to 1185348
[2025-02-23 11:31:07] 2025-02-23 10:30:49,182 | INFO     | did not find any defunct processes belonging to 1185348
[2025-02-23 11:31:07] 2025-02-23 10:30:49,182 | INFO     | ready for new job
[2025-02-23 11:31:07] 2025-02-23 10:30:49,182 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-23 11:31:07] 2025-02-23 10:30:49,185 | INFO     | **************************************
[2025-02-23 11:31:07] 2025-02-23 10:30:49,185 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-23 11:31:07] 2025-02-23 10:30:49,185 | INFO     | **************************************
[2025-02-23 11:31:07] 2025-02-23 10:30:49,186 | INFO     | 
[2025-02-23 11:31:07] 2025-02-23 10:30:49,189 | INFO     | architecture information:
[2025-02-23 11:31:07] 2025-02-23 10:30:49,190 | INFO     | executing command: cat /etc/os-release
[2025-02-23 11:31:07] 2025-02-23 10:30:49,203 | INFO     | cat /etc/os-release:
[2025-02-23 11:31:07] NAME="CentOS Linux"
[2025-02-23 11:31:07] VERSION="7 (Core)"
[2025-02-23 11:31:07] ID="centos"
[2025-02-23 11:31:07] ID_LIKE="rhel fedora"
[2025-02-23 11:31:07] VERSION_ID="7"
[2025-02-23 11:31:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-23 11:31:07] ANSI_COLOR="0;31"
[2025-02-23 11:31:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-23 11:31:07] HOME_URL="https://www.centos.org/"
[2025-02-23 11:31:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-23 11:31:07] 
[2025-02-23 11:31:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-23 11:31:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-23 11:31:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-23 11:31:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-23 11:31:07] 
[2025-02-23 11:31:07] 2025-02-23 10:30:49,204 | INFO     | **************************************
[2025-02-23 11:31:07] 2025-02-23 10:30:49,705 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-02-23 11:31:07] 2025-02-23 10:30:49,720 | INFO     | sufficient remaining disk space (640618070016 B)
[2025-02-23 11:31:07] 2025-02-23 10:30:49,721 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-23 11:31:07] 2025-02-23 10:30:49,721 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-23 11:31:07] 2025-02-23 10:30:49,721 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-23 11:31:07] 2025-02-23 10:30:49,722 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-23 11:31:07] 2025-02-23 10:30:49,722 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-23 11:31:07] 2025-02-23 10:30:49,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-23 11:31:07] 2025-02-23 10:30:49,723 | INFO     | found 0 job(s) in 20 queues
[2025-02-23 11:31:07] 2025-02-23 10:30:49,723 | INFO     | aborting loop
[2025-02-23 11:31:07] 2025-02-23 10:30:49,723 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-23 11:31:07] 2025-02-23 10:30:49,724 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-23 11:31:07] 2025-02-23 10:30:49,766 | INFO     | all job control threads have been joined
[2025-02-23 11:31:07] 2025-02-23 10:30:49,969 | INFO     | all payload control threads have been joined
[2025-02-23 11:31:07] 2025-02-23 10:30:50,168 | INFO     | all data control threads have been joined
[2025-02-23 11:31:07] 2025-02-23 10:30:50,726 | INFO     | [job] retrieve thread has finished
[2025-02-23 11:31:07] 2025-02-23 10:30:50,727 | INFO     | [job] job monitor thread has finished
[2025-02-23 11:31:07] 2025-02-23 10:30:50,728 | INFO     | [job] queue monitor thread has finished
[2025-02-23 11:31:07] 2025-02-23 10:30:50,733 | INFO     | [payload] validate_post thread has finished
[2025-02-23 11:31:07] 2025-02-23 10:30:50,771 | INFO     | [job] control thread has finished
[2025-02-23 11:31:07] 2025-02-23 10:30:50,833 | INFO     | [data] copytool_in thread has finished
[2025-02-23 11:31:07] 2025-02-23 10:30:50,833 | INFO     | [job] create_data_payload thread has finished
[2025-02-23 11:31:07] 2025-02-23 10:30:50,974 | INFO     | [payload] control thread has finished
[2025-02-23 11:31:07] 2025-02-23 10:30:51,171 | INFO     | [data] control thread has finished
[2025-02-23 11:31:07] 2025-02-23 10:30:51,223 | INFO     | [payload] failed_post thread has finished
[2025-02-23 11:31:07] 2025-02-23 10:30:51,260 | INFO     | [payload] validate_pre thread has finished
[2025-02-23 11:31:07] 2025-02-23 10:30:51,543 | INFO     | [payload] execute_payloads thread has finished
[2025-02-23 11:31:07] 2025-02-23 10:30:51,723 | INFO     | [job] validate thread has finished
[2025-02-23 11:31:07] 2025-02-23 10:30:51,724 | INFO     | [data] copytool_out thread has finished
[2025-02-23 11:31:07] 2025-02-23 10:30:52,639 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-23 11:31:07] 2025-02-23 10:30:56,644 | INFO     | [data] queue_monitor thread has finished
[2025-02-23 11:31:07] 2025-02-23 10:31:00,321 | INFO     | job.realtimelogging is not enabled
[2025-02-23 11:31:07] 2025-02-23 10:31:01,326 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-23 11:31:07] 2025-02-23 10:31:02,623 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23194328520512)>', '<ExcThread(monitor, started 23193748211456)>']
[2025-02-23 11:31:07] 2025-02-23 10:31:02,790 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-23 11:31:07] 2025-02-23 10:31:02,790 | INFO     | [monitor] control thread has ended
[2025-02-23 11:31:07] 2025-02-23 10:31:07,648 | INFO     | all workflow threads have been joined
[2025-02-23 11:31:07] 2025-02-23 10:31:07,648 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-23 11:31:07] 2025-02-23 10:31:07,648 | INFO     | traces error code: 0
[2025-02-23 11:31:07] 2025-02-23 10:31:07,649 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-23 11:31:07] 2025-02-23 10:31:07,814 [wrapper] ==== pilot stdout END ====
[2025-02-23 11:31:07] 2025-02-23 10:31:07,817 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-23 11:31:07] 2025-02-23 10:31:07,820 [wrapper] pilotpid: 1171325
[2025-02-23 11:31:07] 2025-02-23 10:31:07,822 [wrapper] Pilot exit status: 0
[2025-02-23 11:31:07] 2025-02-23 10:31:07,833 [wrapper] pandaids: 6519369630
[2025-02-23 11:31:07] 2025-02-23 10:31:07,892 [wrapper] cleanup supervisor_pilot 1799111 1171326
[2025-02-23 11:31:07] 2025-02-23 10:31:07,895 [wrapper] Test setup, not cleaning
[2025-02-23 11:31:07] 2025-02-23 10:31:07,900 [wrapper] apfmon messages muted
[2025-02-23 11:31:07] 2025-02-23 10:31:07,902 [wrapper] ==== wrapper stdout END ====
[2025-02-23 11:31:07] 2025-02-23 10:31:07,905 [wrapper] ==== wrapper stderr END ====
[2025-02-23 11:31:07]  *** Error codes and diagnostics ***
[2025-02-23 11:31:07]     "exeErrorCode": 0,
[2025-02-23 11:31:07]     "exeErrorDiag": "",
[2025-02-23 11:31:07]     "pilotErrorCode": 0,
[2025-02-23 11:31:07]     "pilotErrorDiag": "",
[2025-02-23 11:31:07]  *** Listing of results directory ***
[2025-02-23 11:31:07] total 667856
[2025-02-23 11:31:07] -rw-r--r-- 1 boinc boinc    491065 Feb 19 21:41 pilot3.tar.gz
[2025-02-23 11:31:07] -rw-r--r-- 1 boinc boinc      5118 Feb 19 21:46 queuedata.json
[2025-02-23 11:31:07] -rwx------ 1 boinc boinc     35865 Feb 19 21:47 runpilot2-wrapper.sh
[2025-02-23 11:31:07] -rw-r--r-- 1 boinc boinc       100 Feb 23 05:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-23 11:31:07] -rwxr-xr-x 1 boinc boinc      7986 Feb 23 05:01 run_atlas
[2025-02-23 11:31:07] -rw-r--r-- 1 boinc boinc       105 Feb 23 05:01 job.xml
[2025-02-23 11:31:07] -rw-r--r-- 1 boinc boinc      6633 Feb 23 05:01 init_data.xml
[2025-02-23 11:31:07] -rw-r--r-- 2 boinc boinc 341813173 Feb 23 05:01 EVNT.43078917._001119.pool.root.1
[2025-02-23 11:31:07] -rw-r--r-- 2 boinc boinc     17569 Feb 23 05:01 start_atlas.sh
[2025-02-23 11:31:07] drwxrwx--x 2 boinc boinc      4096 Feb 23 05:01 shared
[2025-02-23 11:31:07] -rw-r--r-- 2 boinc boinc    503562 Feb 23 05:01 input.tar.gz
[2025-02-23 11:31:07] -rw-r--r-- 1 boinc boinc         0 Feb 23 05:01 boinc_lockfile
[2025-02-23 11:31:07] -rw-r--r-- 1 boinc boinc      2548 Feb 23 05:01 pandaJob.out
[2025-02-23 11:31:07] -rw------- 1 boinc boinc       424 Feb 23 05:01 setup.sh.local
[2025-02-23 11:31:07] -rw------- 1 boinc boinc    987744 Feb 23 05:01 agis_schedconf.cvmfs.json
[2025-02-23 11:31:07] drwx------ 4 boinc boinc      4096 Feb 23 05:01 pilot3
[2025-02-23 11:31:07] -rw------- 1 boinc boinc 332164170 Feb 23 11:29 HITS.43078919._076976.pool.root.1
[2025-02-23 11:31:07] -rw-r--r-- 1 boinc boinc       531 Feb 23 11:29 boinc_task_state.xml
[2025-02-23 11:31:07] -rw------- 1 boinc boinc        95 Feb 23 11:30 pilot_heartbeat.json
[2025-02-23 11:31:07] -rw------- 1 boinc boinc      1036 Feb 23 11:30 memory_monitor_summary.json
[2025-02-23 11:31:07] -rw------- 1 boinc boinc   1582569 Feb 23 11:30 agis_ddmendpoints.agis.ALL.json
[2025-02-23 11:31:07] -rw------- 1 boinc boinc    466077 Feb 23 11:30 log.43078919._076976.job.log.tgz.1
[2025-02-23 11:31:07] -rw------- 1 boinc boinc      7742 Feb 23 11:30 heartbeat.json
[2025-02-23 11:31:07] -rw-r--r-- 1 boinc boinc      8192 Feb 23 11:31 boinc_mmap_file
[2025-02-23 11:31:07] -rw-r--r-- 1 boinc boinc        28 Feb 23 11:31 wrapper_checkpoint.txt
[2025-02-23 11:31:07] -rw------- 1 boinc boinc      4420 Feb 23 11:31 pilotlog.txt
[2025-02-23 11:31:07] -rw------- 1 boinc boinc   2583792 Feb 23 11:31 log.43078919._076976.job.log.1
[2025-02-23 11:31:07] -rw------- 1 boinc boinc       357 Feb 23 11:31 output.list
[2025-02-23 11:31:07] -rw-r--r-- 1 boinc boinc       620 Feb 23 11:31 runtime_log
[2025-02-23 11:31:07] -rw------- 1 boinc boinc   3072000 Feb 23 11:31 result.tar.gz
[2025-02-23 11:31:07] -rw-r--r-- 1 boinc boinc     11424 Feb 23 11:31 runtime_log.err
[2025-02-23 11:31:07] -rw------- 1 boinc boinc       665 Feb 23 11:31 F61NDm99546nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmokoKDmrTNRIm.diag
[2025-02-23 11:31:07] -rw-r--r-- 1 boinc boinc     21385 Feb 23 11:31 stderr.txt
[2025-02-23 11:31:07] HITS file was successfully produced:
[2025-02-23 11:31:07] -rw------- 1 boinc boinc 332164170 Feb 23 11:29 shared/HITS.pool.root.1
[2025-02-23 11:31:07]  *** Contents of shared directory: ***
[2025-02-23 11:31:07] total 661704
[2025-02-23 11:31:07] -rw-r--r-- 2 boinc boinc 341813173 Feb 23 05:01 ATLAS.root_0
[2025-02-23 11:31:07] -rw-r--r-- 2 boinc boinc     17569 Feb 23 05:01 start_atlas.sh
[2025-02-23 11:31:07] -rw-r--r-- 2 boinc boinc    503562 Feb 23 05:01 input.tar.gz
[2025-02-23 11:31:07] -rw------- 1 boinc boinc 332164170 Feb 23 11:29 HITS.pool.root.1
[2025-02-23 11:31:07] -rw------- 1 boinc boinc   3072000 Feb 23 11:31 result.tar.gz
11:31:09 (1163593): run_atlas exited; CPU time 89815.282973
11:31:09 (1163593): called boinc_finish(0)

</stderr_txt>
]]>

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