Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:47:52 (2518745): wrapper (7.7.26015): starting
05:47:52 (2518745): wrapper: running run_atlas (--nthreads 4)
[2025-02-21 05:47:52] Arguments: --nthreads 4
[2025-02-21 05:47:52] Threads: 4
[2025-02-21 05:47:52] Checking for CVMFS
[2025-02-21 05:47:52] No cvmfs_config command found, will try listing directly
[2025-02-21 05:47:52] CVMFS is ok
[2025-02-21 05:47:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-21 05:47:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-21 05:47:52] Further information can be found at the LHC@home message board.
[2025-02-21 05:47:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-21 05:47:52] Checking for apptainer binary...
[2025-02-21 05:47:52] which: no apptainer in ((null))
[2025-02-21 05:47:52] apptainer is not installed, using version from CVMFS
[2025-02-21 05:47:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-21 05:47:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-02-21 05:47:52] apptainer works
[2025-02-21 05:47:52] Set ATHENA_PROC_NUMBER=4
[2025-02-21 05:47:52] Set ATHENA_CORE_NUMBER=4
[2025-02-21 05:47:52] Starting ATLAS job with PandaID=6519369615
[2025-02-21 05:47:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-21 11:48:23]  *** The last 200 lines of the pilot log: ***
[2025-02-21 11:48:23] 2025-02-21 10:48:02,111 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-21 11:48:23] 2025-02-21 10:48:02,118 | INFO     | fitting pss+swap vs Time
[2025-02-21 11:48:23] 2025-02-21 10:48:02,118 | INFO     | model: linear, x: [1740113318.0, 1740113379.0, 1740113440.0, 1740113501.0, 1740113562.0, 1740113623.0, 1740113684.0, 1740113745.0, 1740113806.0, 1740113867.0, 1740
[2025-02-21 11:48:23] 2025-02-21 10:48:02,119 | INFO     | sum of square deviations: 13755764892.5
[2025-02-21 11:48:23] 2025-02-21 10:48:02,123 | INFO     | sum of deviations: 137034402637.0
[2025-02-21 11:48:23] 2025-02-21 10:48:02,123 | INFO     | mean x: 1740124084.5
[2025-02-21 11:48:23] 2025-02-21 10:48:02,123 | INFO     | mean y: 2324748.5988700567
[2025-02-21 11:48:23] 2025-02-21 10:48:02,123 | INFO     | -- intersect: -17332724686.836517
[2025-02-21 11:48:23] 2025-02-21 10:48:02,123 | INFO     | intersect: -17332724686.836517
[2025-02-21 11:48:23] 2025-02-21 10:48:02,124 | INFO     | chi2: 4.413983674526878
[2025-02-21 11:48:23] 2025-02-21 10:48:02,124 | INFO     | model: linear, x: [1740113318.0, 1740113379.0, 1740113440.0, 1740113501.0, 1740113562.0, 1740113623.0, 1740113684.0, 1740113745.0, 1740113806.0, 1740113867.0, 1740
[2025-02-21 11:48:23] 2025-02-21 10:48:02,125 | INFO     | sum of square deviations: 13181084350.0
[2025-02-21 11:48:23] 2025-02-21 10:48:02,128 | INFO     | sum of deviations: 157331722404.0
[2025-02-21 11:48:23] 2025-02-21 10:48:02,128 | INFO     | mean x: 1740123932.0
[2025-02-21 11:48:23] 2025-02-21 10:48:02,128 | INFO     | mean y: 2330066.318051576
[2025-02-21 11:48:23] 2025-02-21 10:48:02,128 | INFO     | -- intersect: -20768092772.071644
[2025-02-21 11:48:23] 2025-02-21 10:48:02,128 | INFO     | intersect: -20768092772.071644
[2025-02-21 11:48:23] 2025-02-21 10:48:02,129 | INFO     | chi2: 3.6322533935610974
[2025-02-21 11:48:23] 2025-02-21 10:48:02,129 | INFO     | current chi2=3.6322533935610974 (change=17.71031201309488 %)
[2025-02-21 11:48:23] 2025-02-21 10:48:02,129 | INFO     | right removable region: 348
[2025-02-21 11:48:23] 2025-02-21 10:48:02,129 | INFO     | model: linear, x: [1740113623.0, 1740113684.0, 1740113745.0, 1740113806.0, 1740113867.0, 1740113928.0, 1740113989.0, 1740114050.0, 1740114111.0, 1740114172.0, 1740
[2025-02-21 11:48:23] 2025-02-21 10:48:02,130 | INFO     | sum of square deviations: 13181084350.0
[2025-02-21 11:48:23] 2025-02-21 10:48:02,133 | INFO     | sum of deviations: 56737439377.000015
[2025-02-21 11:48:23] 2025-02-21 10:48:02,133 | INFO     | mean x: 1740124237.0
[2025-02-21 11:48:23] 2025-02-21 10:48:02,133 | INFO     | mean y: 2346014.833810888
[2025-02-21 11:48:23] 2025-02-21 10:48:02,133 | INFO     | -- intersect: -7487947710.904763
[2025-02-21 11:48:23] 2025-02-21 10:48:02,133 | INFO     | intersect: -7487947710.904763
[2025-02-21 11:48:23] 2025-02-21 10:48:02,134 | INFO     | chi2: 2.126768151011043
[2025-02-21 11:48:23] 2025-02-21 10:48:02,134 | INFO     | current chi2=2.126768151011043 (change=51.81748941926014 %)
[2025-02-21 11:48:23] 2025-02-21 10:48:02,134 | INFO     | model: linear, x: [1740113928.0, 1740113989.0, 1740114050.0, 1740114111.0, 1740114172.0, 1740114233.0, 1740114294.0, 1740114355.0, 1740114416.0, 1740114477.0, 1740
[2025-02-21 11:48:23] 2025-02-21 10:48:02,136 | INFO     | sum of square deviations: 12622636670.0
[2025-02-21 11:48:23] 2025-02-21 10:48:02,139 | INFO     | sum of deviations: -5304464809.5
[2025-02-21 11:48:23] 2025-02-21 10:48:02,139 | INFO     | mean x: 1740124389.5
[2025-02-21 11:48:23] 2025-02-21 10:48:02,139 | INFO     | mean y: 2362958.9040697673
[2025-02-21 11:48:23] 2025-02-21 10:48:02,139 | INFO     | -- intersect: 733622903.2066115
[2025-02-21 11:48:23] 2025-02-21 10:48:02,139 | INFO     | intersect: 733622903.2066115
[2025-02-21 11:48:23] 2025-02-21 10:48:02,140 | INFO     | chi2: 0.8899344170286538
[2025-02-21 11:48:23] 2025-02-21 10:48:02,140 | INFO     | current chi2=0.8899344170286538 (change=58.15555087160824 %)
[2025-02-21 11:48:23] 2025-02-21 10:48:02,140 | INFO     | model: linear, x: [1740114233.0, 1740114294.0, 1740114355.0, 1740114416.0, 1740114477.0, 1740114538.0, 1740114599.0, 1740114660.0, 1740114721.0, 1740114782.0, 1740
[2025-02-21 11:48:23] 2025-02-21 10:48:02,141 | INFO     | sum of square deviations: 12080189290.0
[2025-02-21 11:48:23] 2025-02-21 10:48:02,144 | INFO     | sum of deviations: -16836574802.999996
[2025-02-21 11:48:23] 2025-02-21 10:48:02,144 | INFO     | mean x: 1740124542.0
[2025-02-21 11:48:23] 2025-02-21 10:48:02,144 | INFO     | mean y: 2366182.359882006
[2025-02-21 11:48:23] 2025-02-21 10:48:02,144 | INFO     | -- intersect: 2427637534.8685565
[2025-02-21 11:48:23] 2025-02-21 10:48:02,144 | INFO     | intersect: 2427637534.8685565
[2025-02-21 11:48:23] 2025-02-21 10:48:02,145 | INFO     | chi2: 0.819825366428881
[2025-02-21 11:48:23] 2025-02-21 10:48:02,145 | INFO     | current chi2=0.819825366428881 (change=7.878001935676957 %)
[2025-02-21 11:48:23] 2025-02-21 10:48:02,145 | INFO     | left removable region: 30
[2025-02-21 11:48:23] 2025-02-21 10:48:02,145 | INFO     | model: linear, x: [1740115148.0, 1740115209.0, 1740115270.0, 1740115331.0, 1740115392.0, 1740115453.0, 1740115514.0, 1740115575.0, 1740115636.0, 1740115697.0, 1740
[2025-02-21 11:48:23] 2025-02-21 10:48:02,145 | INFO     | sum of square deviations: 9971385099.5
[2025-02-21 11:48:23] 2025-02-21 10:48:02,148 | INFO     | sum of deviations: 12974233075.499996
[2025-02-21 11:48:23] 2025-02-21 10:48:02,148 | INFO     | mean x: 1740124816.5
[2025-02-21 11:48:23] 2025-02-21 10:48:02,148 | INFO     | mean y: 2369796.4056603773
[2025-02-21 11:48:23] 2025-02-21 10:48:02,148 | INFO     | -- intersect: -2261787562.3212376
[2025-02-21 11:48:23] 2025-02-21 10:48:02,149 | INFO     | intersect: -2261787562.3212376
[2025-02-21 11:48:23] 2025-02-21 10:48:02,149 | INFO     | chi2: 0.0018996062740471952
[2025-02-21 11:48:23] 2025-02-21 10:48:02,149 | INFO     | -- intersect: -2261787562.3212376
[2025-02-21 11:48:23] 2025-02-21 10:48:02,149 | INFO     | current memory leak: 1.30 B/s (using 318 data points, chi2=0.00)
[2025-02-21 11:48:23] 2025-02-21 10:48:02,151 | INFO     | ..............................
[2025-02-21 11:48:23] 2025-02-21 10:48:02,151 | INFO     | . Timing measurements:
[2025-02-21 11:48:23] 2025-02-21 10:48:02,151 | INFO     | . get job = 0 s
[2025-02-21 11:48:23] 2025-02-21 10:48:02,151 | INFO     | . initial setup = 1 s
[2025-02-21 11:48:23] 2025-02-21 10:48:02,151 | INFO     | . payload setup = 8 s
[2025-02-21 11:48:23] 2025-02-21 10:48:02,151 | INFO     | . stage-in = 0 s
[2025-02-21 11:48:23] 2025-02-21 10:48:02,151 | INFO     | . payload execution = 21556 s
[2025-02-21 11:48:23] 2025-02-21 10:48:02,151 | INFO     | . stage-out = 1 s
[2025-02-21 11:48:23] 2025-02-21 10:48:02,151 | INFO     | . log creation = 0 s
[2025-02-21 11:48:23] 2025-02-21 10:48:02,151 | INFO     | ..............................
[2025-02-21 11:48:23] 2025-02-21 10:48:02,250 | INFO     | 
[2025-02-21 11:48:23] 2025-02-21 10:48:02,250 | INFO     | job summary report
[2025-02-21 11:48:23] 2025-02-21 10:48:02,250 | INFO     | --------------------------------------------------
[2025-02-21 11:48:23] 2025-02-21 10:48:02,250 | INFO     | PanDA job id: 6519369615
[2025-02-21 11:48:23] 2025-02-21 10:48:02,250 | INFO     | task id: 43078919
[2025-02-21 11:48:23] 2025-02-21 10:48:02,251 | INFO     | errors: (none)
[2025-02-21 11:48:23] 2025-02-21 10:48:02,251 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-21 11:48:23] 2025-02-21 10:48:02,251 | INFO     | pilot state: finished 
[2025-02-21 11:48:23] 2025-02-21 10:48:02,251 | INFO     | transexitcode: 0
[2025-02-21 11:48:23] 2025-02-21 10:48:02,251 | INFO     | exeerrorcode: 0
[2025-02-21 11:48:23] 2025-02-21 10:48:02,251 | INFO     | exeerrordiag: 
[2025-02-21 11:48:23] 2025-02-21 10:48:02,251 | INFO     | exitcode: 0
[2025-02-21 11:48:23] 2025-02-21 10:48:02,251 | INFO     | exitmsg: OK
[2025-02-21 11:48:23] 2025-02-21 10:48:02,251 | INFO     | cpuconsumptiontime: 81799 s
[2025-02-21 11:48:23] 2025-02-21 10:48:02,251 | INFO     | nevents: 400
[2025-02-21 11:48:23] 2025-02-21 10:48:02,251 | INFO     | neventsw: 0
[2025-02-21 11:48:23] 2025-02-21 10:48:02,251 | INFO     | pid: 2530236
[2025-02-21 11:48:23] 2025-02-21 10:48:02,251 | INFO     | pgrp: 2530236
[2025-02-21 11:48:23] 2025-02-21 10:48:02,252 | INFO     | corecount: 4
[2025-02-21 11:48:23] 2025-02-21 10:48:02,252 | INFO     | event service: False
[2025-02-21 11:48:23] 2025-02-21 10:48:02,252 | INFO     | sizes: {0: 2388541, 1: 2389408, 7: 2389614, 12: 2389642, 21568: 2423121, 21571: 2433110, 21579: 2433224}
[2025-02-21 11:48:23] 2025-02-21 10:48:02,252 | INFO     | --------------------------------------------------
[2025-02-21 11:48:23] 2025-02-21 10:48:02,252 | INFO     | 
[2025-02-21 11:48:23] 2025-02-21 10:48:02,252 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-02-21 11:48:23] 2025-02-21 10:48:02,282 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-21 11:48:23] 2025-02-21 10:48:02,283 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-21 11:48:23] 2025-02-21 10:48:02,283 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-21 11:48:23] 2025-02-21 10:48:02,283 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-21 11:48:23] 2025-02-21 10:48:02,283 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-21 11:48:23] 2025-02-21 10:48:02,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-21 11:48:23] 2025-02-21 10:48:02,283 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-21 11:48:23] 2025-02-21 10:48:02,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-21 11:48:23] 2025-02-21 10:48:02,284 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-21 11:48:23] 2025-02-21 10:48:02,284 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-21 11:48:23] 2025-02-21 10:48:02,284 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-21 11:48:23] 2025-02-21 10:48:02,284 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-21 11:48:23] 2025-02-21 10:48:02,284 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-21 11:48:23] 2025-02-21 10:48:02,284 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-21 11:48:23] 2025-02-21 10:48:02,284 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-21 11:48:23] 2025-02-21 10:48:02,284 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-21 11:48:23] 2025-02-21 10:48:02,284 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-21 11:48:23] 2025-02-21 10:48:02,284 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-21 11:48:23] 2025-02-21 10:48:02,284 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-21 11:48:23] 2025-02-21 10:48:02,285 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-21 11:48:23] 2025-02-21 10:48:02,285 | INFO     | job 6519369615 has completed (purged errors)
[2025-02-21 11:48:23] 2025-02-21 10:48:02,285 | INFO     | overall cleanup function is called
[2025-02-21 11:48:23] 2025-02-21 10:48:03,294 | INFO     | --- collectZombieJob: --- 10, [2530236]
[2025-02-21 11:48:23] 2025-02-21 10:48:03,294 | INFO     | zombie collector waiting for pid 2530236
[2025-02-21 11:48:23] 2025-02-21 10:48:03,294 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-21 11:48:23] 2025-02-21 10:48:03,294 | INFO     | collected zombie processes
[2025-02-21 11:48:23] 2025-02-21 10:48:03,294 | INFO     | will attempt to kill all subprocesses of pid=2530236
[2025-02-21 11:48:23] 2025-02-21 10:48:03,615 | INFO     | process IDs to be killed: [2530236] (in reverse order)
[2025-02-21 11:48:23] 2025-02-21 10:48:03,834 [wrapper] supervise_pilot (15 min periods counter: 25)
[2025-02-21 11:48:23] 2025-02-21 10:48:03,884 | WARNING  | found no corresponding commands to process id(s)
[2025-02-21 11:48:23] 2025-02-21 10:48:03,884 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-21 11:48:23] 2025-02-21 10:48:03,909 | INFO     | did not find any defunct processes belonging to 2530236
[2025-02-21 11:48:23] 2025-02-21 10:48:03,935 | INFO     | did not find any defunct processes belonging to 2530236
[2025-02-21 11:48:23] 2025-02-21 10:48:03,935 | INFO     | ready for new job
[2025-02-21 11:48:23] 2025-02-21 10:48:03,936 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-21 11:48:23] 2025-02-21 10:48:03,939 | INFO     | **************************************
[2025-02-21 11:48:23] 2025-02-21 10:48:03,939 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-21 11:48:23] 2025-02-21 10:48:03,939 | INFO     | **************************************
[2025-02-21 11:48:23] 2025-02-21 10:48:03,939 | INFO     | 
[2025-02-21 11:48:23] 2025-02-21 10:48:03,948 | INFO     | architecture information:
[2025-02-21 11:48:23] 2025-02-21 10:48:03,948 | INFO     | executing command: cat /etc/os-release
[2025-02-21 11:48:23] 2025-02-21 10:48:03,972 | INFO     | cat /etc/os-release:
[2025-02-21 11:48:23] NAME="CentOS Linux"
[2025-02-21 11:48:23] VERSION="7 (Core)"
[2025-02-21 11:48:23] ID="centos"
[2025-02-21 11:48:23] ID_LIKE="rhel fedora"
[2025-02-21 11:48:23] VERSION_ID="7"
[2025-02-21 11:48:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-21 11:48:23] ANSI_COLOR="0;31"
[2025-02-21 11:48:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-21 11:48:23] HOME_URL="https://www.centos.org/"
[2025-02-21 11:48:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-21 11:48:23] 
[2025-02-21 11:48:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-21 11:48:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-21 11:48:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-21 11:48:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-21 11:48:23] 
[2025-02-21 11:48:23] 2025-02-21 10:48:03,972 | INFO     | **************************************
[2025-02-21 11:48:23] 2025-02-21 10:48:04,475 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-02-21 11:48:23] 2025-02-21 10:48:04,502 | INFO     | sufficient remaining disk space (3271934607360 B)
[2025-02-21 11:48:23] 2025-02-21 10:48:04,502 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-21 11:48:23] 2025-02-21 10:48:04,502 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-21 11:48:23] 2025-02-21 10:48:04,652 | INFO     | found 0 job(s) in 20 queues
[2025-02-21 11:48:23] 2025-02-21 10:48:04,653 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-21 11:48:23] 2025-02-21 10:48:04,653 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-21 11:48:23] 2025-02-21 10:48:04,847 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-21 11:48:23] 2025-02-21 10:48:04,872 | INFO     | all data control threads have been joined
[2025-02-21 11:48:23] 2025-02-21 10:48:05,138 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-21 11:48:23] 2025-02-21 10:48:05,138 | INFO     | aborting loop
[2025-02-21 11:48:23] 2025-02-21 10:48:05,192 | INFO     | all payload control threads have been joined
[2025-02-21 11:48:23] 2025-02-21 10:48:05,225 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-21 11:48:23] 2025-02-21 10:48:05,505 | INFO     | [job] retrieve thread has finished
[2025-02-21 11:48:23] 2025-02-21 10:48:05,589 | INFO     | [data] copytool_in thread has finished
[2025-02-21 11:48:23] 2025-02-21 10:48:05,726 | INFO     | [payload] validate_post thread has finished
[2025-02-21 11:48:23] 2025-02-21 10:48:05,874 | INFO     | [data] control thread has finished
[2025-02-21 11:48:23] 2025-02-21 10:48:05,949 | INFO     | [job] create_data_payload thread has finished
[2025-02-21 11:48:23] 2025-02-21 10:48:05,973 | INFO     | all job control threads have been joined
[2025-02-21 11:48:23] 2025-02-21 10:48:06,140 | INFO     | [job] job monitor thread has finished
[2025-02-21 11:48:23] 2025-02-21 10:48:06,197 | INFO     | [payload] control thread has finished
[2025-02-21 11:48:23] 2025-02-21 10:48:06,341 | INFO     | [payload] execute_payloads thread has finished
[2025-02-21 11:48:23] 2025-02-21 10:48:06,463 | INFO     | [payload] validate_pre thread has finished
[2025-02-21 11:48:23] 2025-02-21 10:48:06,637 | INFO     | [job] validate thread has finished
[2025-02-21 11:48:23] 2025-02-21 10:48:06,852 | INFO     | [data] copytool_out thread has finished
[2025-02-21 11:48:23] 2025-02-21 10:48:06,942 | INFO     | [payload] failed_post thread has finished
[2025-02-21 11:48:23] 2025-02-21 10:48:06,978 | INFO     | [job] control thread has finished
[2025-02-21 11:48:23] 2025-02-21 10:48:07,261 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-21 11:48:23] 2025-02-21 10:48:08,266 | INFO     | [job] queue monitor thread has finished
[2025-02-21 11:48:23] 2025-02-21 10:48:09,231 | INFO     | [data] queue_monitor thread has finished
[2025-02-21 11:48:23] 2025-02-21 10:48:14,615 | INFO     | job.realtimelogging is not enabled
[2025-02-21 11:48:23] 2025-02-21 10:48:15,621 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-21 11:48:23] 2025-02-21 10:48:17,709 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23356211021632)>', '<ExcThread(monitor, started 23355977598720)>']
[2025-02-21 11:48:23] 2025-02-21 10:48:17,713 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-21 11:48:23] 2025-02-21 10:48:17,713 | INFO     | [monitor] control thread has ended
[2025-02-21 11:48:23] 2025-02-21 10:48:22,734 | INFO     | all workflow threads have been joined
[2025-02-21 11:48:23] 2025-02-21 10:48:22,734 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-21 11:48:23] 2025-02-21 10:48:22,734 | INFO     | traces error code: 0
[2025-02-21 11:48:23] 2025-02-21 10:48:22,735 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-21 11:48:23] 2025-02-21 10:48:22,944 [wrapper] ==== pilot stdout END ====
[2025-02-21 11:48:23] 2025-02-21 10:48:22,948 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-21 11:48:23] 2025-02-21 10:48:22,952 [wrapper] pilotpid: 2522714
[2025-02-21 11:48:23] 2025-02-21 10:48:22,956 [wrapper] Pilot exit status: 0
[2025-02-21 11:48:23] 2025-02-21 10:48:22,972 [wrapper] pandaids: 6519369615
[2025-02-21 11:48:23] 2025-02-21 10:48:23,120 [wrapper] cleanup supervisor_pilot 4170946 2522715
[2025-02-21 11:48:23] 2025-02-21 10:48:23,124 [wrapper] Test setup, not cleaning
[2025-02-21 11:48:23] 2025-02-21 10:48:23,132 [wrapper] apfmon messages muted
[2025-02-21 11:48:23] 2025-02-21 10:48:23,136 [wrapper] ==== wrapper stdout END ====
[2025-02-21 11:48:23] 2025-02-21 10:48:23,140 [wrapper] ==== wrapper stderr END ====
[2025-02-21 11:48:23]  *** Error codes and diagnostics ***
[2025-02-21 11:48:23]     "exeErrorCode": 0,
[2025-02-21 11:48:23]     "exeErrorDiag": "",
[2025-02-21 11:48:23]     "pilotErrorCode": 0,
[2025-02-21 11:48:23]     "pilotErrorDiag": "",
[2025-02-21 11:48:23]  *** Listing of results directory ***
[2025-02-21 11:48:23] total 667004
[2025-02-21 11:48:23] -rw-r--r-- 1 boinc boinc    491065 Feb 19 21:41 pilot3.tar.gz
[2025-02-21 11:48:23] -rw-r--r-- 1 boinc boinc      5118 Feb 19 21:46 queuedata.json
[2025-02-21 11:48:23] -rwx------ 1 boinc boinc     35865 Feb 19 21:46 runpilot2-wrapper.sh
[2025-02-21 11:48:23] -rw-r--r-- 1 boinc boinc       100 Feb 21 05:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-21 11:48:23] -rwxr-xr-x 1 boinc boinc      7986 Feb 21 05:47 run_atlas
[2025-02-21 11:48:23] -rw-r--r-- 1 boinc boinc       105 Feb 21 05:47 job.xml
[2025-02-21 11:48:23] -rw-r--r-- 1 boinc boinc      6677 Feb 21 05:47 init_data.xml
[2025-02-21 11:48:23] -rw-r--r-- 2 boinc boinc 341728618 Feb 21 05:47 EVNT.43078917._001261.pool.root.1
[2025-02-21 11:48:23] -rw-r--r-- 2 boinc boinc     17569 Feb 21 05:47 start_atlas.sh
[2025-02-21 11:48:23] drwxrwx--x 2 boinc boinc      4096 Feb 21 05:47 shared
[2025-02-21 11:48:23] -rw-r--r-- 2 boinc boinc    503562 Feb 21 05:47 input.tar.gz
[2025-02-21 11:48:23] -rw-r--r-- 1 boinc boinc         0 Feb 21 05:47 boinc_lockfile
[2025-02-21 11:48:23] -rw-r--r-- 1 boinc boinc      2547 Feb 21 05:47 pandaJob.out
[2025-02-21 11:48:23] -rw------- 1 boinc boinc       424 Feb 21 05:47 setup.sh.local
[2025-02-21 11:48:23] -rw------- 1 boinc boinc    994760 Feb 21 05:48 agis_schedconf.cvmfs.json
[2025-02-21 11:48:23] drwx------ 4 boinc boinc      4096 Feb 21 05:48 pilot3
[2025-02-21 11:48:23] -rw------- 1 boinc boinc 331618897 Feb 21 11:47 HITS.43078919._076961.pool.root.1
[2025-02-21 11:48:23] -rw------- 1 boinc boinc        95 Feb 21 11:47 pilot_heartbeat.json
[2025-02-21 11:48:23] -rw-r--r-- 1 boinc boinc       531 Feb 21 11:47 boinc_task_state.xml
[2025-02-21 11:48:23] -rw------- 1 boinc boinc      1029 Feb 21 11:47 memory_monitor_summary.json
[2025-02-21 11:48:23] -rw------- 1 boinc boinc   1582569 Feb 21 11:47 agis_ddmendpoints.agis.ALL.json
[2025-02-21 11:48:23] -rw------- 1 boinc boinc    453761 Feb 21 11:47 log.43078919._076961.job.log.tgz.1
[2025-02-21 11:48:23] -rw-r--r-- 1 boinc boinc      8192 Feb 21 11:47 boinc_mmap_file
[2025-02-21 11:48:23] -rw-r--r-- 1 boinc boinc        28 Feb 21 11:47 wrapper_checkpoint.txt
[2025-02-21 11:48:23] -rw------- 1 boinc boinc      7699 Feb 21 11:48 heartbeat.json
[2025-02-21 11:48:23] -rw------- 1 boinc boinc      4298 Feb 21 11:48 pilotlog.txt
[2025-02-21 11:48:23] -rw------- 1 boinc boinc   2472720 Feb 21 11:48 log.43078919._076961.job.log.1
[2025-02-21 11:48:23] -rw------- 1 boinc boinc       357 Feb 21 11:48 output.list
[2025-02-21 11:48:23] -rw-r--r-- 1 boinc boinc       620 Feb 21 11:48 runtime_log
[2025-02-21 11:48:23] -rw------- 1 boinc boinc   2949120 Feb 21 11:48 result.tar.gz
[2025-02-21 11:48:23] -rw-r--r-- 1 boinc boinc     11424 Feb 21 11:48 runtime_log.err
[2025-02-21 11:48:23] -rw------- 1 boinc boinc       666 Feb 21 11:48 RFmKDm18546nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmjkoKDmJXx4bm.diag
[2025-02-21 11:48:23] -rw-r--r-- 1 boinc boinc     21273 Feb 21 11:48 stderr.txt
[2025-02-21 11:48:23] HITS file was successfully produced:
[2025-02-21 11:48:23] -rw------- 1 boinc boinc 331618897 Feb 21 11:47 shared/HITS.pool.root.1
[2025-02-21 11:48:23]  *** Contents of shared directory: ***
[2025-02-21 11:48:23] total 660968
[2025-02-21 11:48:23] -rw-r--r-- 2 boinc boinc 341728618 Feb 21 05:47 ATLAS.root_0
[2025-02-21 11:48:23] -rw-r--r-- 2 boinc boinc     17569 Feb 21 05:47 start_atlas.sh
[2025-02-21 11:48:23] -rw-r--r-- 2 boinc boinc    503562 Feb 21 05:47 input.tar.gz
[2025-02-21 11:48:23] -rw------- 1 boinc boinc 331618897 Feb 21 11:47 HITS.pool.root.1
[2025-02-21 11:48:23] -rw------- 1 boinc boinc   2949120 Feb 21 11:48 result.tar.gz
11:48:24 (2518745): run_atlas exited; CPU time 81482.189899
11:48:24 (2518745): called boinc_finish(0)

</stderr_txt>
]]>

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