Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:29:04 (2522301): wrapper (7.7.26015): starting
05:29:04 (2522301): wrapper: running run_atlas (--nthreads 4)
[2025-02-20 05:29:04] Arguments: --nthreads 4
[2025-02-20 05:29:04] Threads: 4
[2025-02-20 05:29:04] Checking for CVMFS
[2025-02-20 05:29:04] No cvmfs_config command found, will try listing directly
[2025-02-20 05:29:04] CVMFS is ok
[2025-02-20 05:29:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-20 05:29:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-20 05:29:04] Further information can be found at the LHC@home message board.
[2025-02-20 05:29:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-20 05:29:04] Checking for apptainer binary...
[2025-02-20 05:29:04] which: no apptainer in ((null))
[2025-02-20 05:29:04] apptainer is not installed, using version from CVMFS
[2025-02-20 05:29:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-20 05:29:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2025-02-20 05:29:05] apptainer works
[2025-02-20 05:29:05] Set ATHENA_PROC_NUMBER=4
[2025-02-20 05:29:05] Set ATHENA_CORE_NUMBER=4
[2025-02-20 05:29:05] Starting ATLAS job with PandaID=6519088371
[2025-02-20 05:29:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-20 14:12:21]  *** The last 200 lines of the pilot log: ***
[2025-02-20 14:12:21] 2025-02-20 13:12:06,617 | INFO     | model: linear, x: [1740025780.0, 1740025841.0, 1740025902.0, 1740025963.0, 1740026024.0, 1740026085.0, 1740026146.0, 1740026207.0, 1740026268.0, 1740026329.0, 1740
[2025-02-20 14:12:21] 2025-02-20 13:12:06,617 | INFO     | sum of square deviations: 42108147652.5
[2025-02-20 14:12:21] 2025-02-20 13:12:06,626 | INFO     | sum of deviations: 29513062059.499947
[2025-02-20 14:12:21] 2025-02-20 13:12:06,627 | INFO     | mean x: 1740041426.5
[2025-02-20 14:12:21] 2025-02-20 13:12:06,627 | INFO     | mean y: 2380955.4105058364
[2025-02-20 14:12:21] 2025-02-20 13:12:06,627 | INFO     | -- intersect: -1217191822.527789
[2025-02-20 14:12:21] 2025-02-20 13:12:06,627 | INFO     | intersect: -1217191822.527789
[2025-02-20 14:12:21] 2025-02-20 13:12:06,628 | INFO     | chi2: 4.19212090835421
[2025-02-20 14:12:21] 2025-02-20 13:12:06,629 | INFO     | model: linear, x: [1740025780.0, 1740025841.0, 1740025902.0, 1740025963.0, 1740026024.0, 1740026085.0, 1740026146.0, 1740026207.0, 1740026268.0, 1740026329.0, 1740
[2025-02-20 14:12:21] 2025-02-20 13:12:06,630 | INFO     | sum of square deviations: 40891222510.0
[2025-02-20 14:12:21] 2025-02-20 13:12:06,638 | INFO     | sum of deviations: 59364573102.99995
[2025-02-20 14:12:21] 2025-02-20 13:12:06,638 | INFO     | mean x: 1740041274.0
[2025-02-20 14:12:21] 2025-02-20 13:12:06,639 | INFO     | mean y: 2384666.430255403
[2025-02-20 14:12:21] 2025-02-20 13:12:06,639 | INFO     | -- intersect: -2523751777.3346334
[2025-02-20 14:12:21] 2025-02-20 13:12:06,639 | INFO     | intersect: -2523751777.3346334
[2025-02-20 14:12:21] 2025-02-20 13:12:06,640 | INFO     | chi2: 3.5392521228171914
[2025-02-20 14:12:21] 2025-02-20 13:12:06,640 | INFO     | current chi2=3.5392521228171914 (change=15.573710773369104 %)
[2025-02-20 14:12:21] 2025-02-20 13:12:06,640 | INFO     | right removable region: 508
[2025-02-20 14:12:21] 2025-02-20 13:12:06,641 | INFO     | model: linear, x: [1740026085.0, 1740026146.0, 1740026207.0, 1740026268.0, 1740026329.0, 1740026390.0, 1740026451.0, 1740026512.0, 1740026573.0, 1740026634.0, 1740
[2025-02-20 14:12:21] 2025-02-20 13:12:06,641 | INFO     | sum of square deviations: 40891222510.0
[2025-02-20 14:12:21] 2025-02-20 13:12:06,649 | INFO     | sum of deviations: -81640469350.0
[2025-02-20 14:12:21] 2025-02-20 13:12:06,649 | INFO     | mean x: 1740041579.0
[2025-02-20 14:12:21] 2025-02-20 13:12:06,650 | INFO     | mean y: 2394861.524557957
[2025-02-20 14:12:21] 2025-02-20 13:12:06,650 | INFO     | -- intersect: 3476436537.9096227
[2025-02-20 14:12:21] 2025-02-20 13:12:06,650 | INFO     | intersect: 3476436537.9096227
[2025-02-20 14:12:21] 2025-02-20 13:12:06,651 | INFO     | chi2: 2.09306601207942
[2025-02-20 14:12:21] 2025-02-20 13:12:06,651 | INFO     | current chi2=2.09306601207942 (change=50.07143024171171 %)
[2025-02-20 14:12:21] 2025-02-20 13:12:06,652 | INFO     | model: linear, x: [1740026390.0, 1740026451.0, 1740026512.0, 1740026573.0, 1740026634.0, 1740026695.0, 1740026756.0, 1740026817.0, 1740026878.0, 1740026939.0, 1740
[2025-02-20 14:12:21] 2025-02-20 13:12:06,652 | INFO     | sum of square deviations: 39697972230.0
[2025-02-20 14:12:21] 2025-02-20 13:12:06,660 | INFO     | sum of deviations: -158192943309.49994
[2025-02-20 14:12:21] 2025-02-20 13:12:06,660 | INFO     | mean x: 1740041731.5
[2025-02-20 14:12:21] 2025-02-20 13:12:06,660 | INFO     | mean y: 2404644.8154761903
[2025-02-20 14:12:21] 2025-02-20 13:12:06,660 | INFO     | -- intersect: 6936318583.606692
[2025-02-20 14:12:21] 2025-02-20 13:12:06,661 | INFO     | intersect: 6936318583.606692
[2025-02-20 14:12:21] 2025-02-20 13:12:06,661 | INFO     | chi2: 1.176833772042305
[2025-02-20 14:12:21] 2025-02-20 13:12:06,662 | INFO     | current chi2=1.176833772042305 (change=43.774646129142205 %)
[2025-02-20 14:12:21] 2025-02-20 13:12:06,662 | INFO     | model: linear, x: [1740026695.0, 1740026756.0, 1740026817.0, 1740026878.0, 1740026939.0, 1740027000.0, 1740027061.0, 1740027122.0, 1740027183.0, 1740027244.0, 1740
[2025-02-20 14:12:21] 2025-02-20 13:12:06,663 | INFO     | sum of square deviations: 38528164250.0
[2025-02-20 14:12:21] 2025-02-20 13:12:06,671 | INFO     | sum of deviations: -162720850547.0
[2025-02-20 14:12:21] 2025-02-20 13:12:06,671 | INFO     | mean x: 1740041884.0
[2025-02-20 14:12:21] 2025-02-20 13:12:06,671 | INFO     | mean y: 2405224.4509018036
[2025-02-20 14:12:21] 2025-02-20 13:12:06,671 | INFO     | -- intersect: 7351343354.870244
[2025-02-20 14:12:21] 2025-02-20 13:12:06,671 | INFO     | intersect: 7351343354.870244
[2025-02-20 14:12:21] 2025-02-20 13:12:06,672 | INFO     | chi2: 1.133372941838055
[2025-02-20 14:12:21] 2025-02-20 13:12:06,672 | INFO     | current chi2=1.133372941838055 (change=3.693030505814523 %)
[2025-02-20 14:12:21] 2025-02-20 13:12:06,673 | INFO     | left removable region: 30
[2025-02-20 14:12:21] 2025-02-20 13:12:06,673 | INFO     | model: linear, x: [1740027610.0, 1740027671.0, 1740027732.0, 1740027793.0, 1740027854.0, 1740027915.0, 1740027976.0, 1740028037.0, 1740028098.0, 1740028159.0, 1740
[2025-02-20 14:12:21] 2025-02-20 13:12:06,674 | INFO     | sum of square deviations: 33865712179.5
[2025-02-20 14:12:21] 2025-02-20 13:12:06,680 | INFO     | sum of deviations: -65180244783.000015
[2025-02-20 14:12:21] 2025-02-20 13:12:06,680 | INFO     | mean x: 1740042158.5
[2025-02-20 14:12:21] 2025-02-20 13:12:06,682 | INFO     | mean y: 2400057.1673640166
[2025-02-20 14:12:21] 2025-02-20 13:12:06,682 | INFO     | -- intersect: 3351403120.2839365
[2025-02-20 14:12:21] 2025-02-20 13:12:06,682 | INFO     | intersect: 3351403120.2839365
[2025-02-20 14:12:21] 2025-02-20 13:12:06,683 | INFO     | chi2: 0.2983965816975899
[2025-02-20 14:12:21] 2025-02-20 13:12:06,683 | INFO     | -- intersect: 3351403120.2839365
[2025-02-20 14:12:21] 2025-02-20 13:12:06,683 | INFO     | current memory leak: -1.92 B/s (using 478 data points, chi2=0.30)
[2025-02-20 14:12:21] 2025-02-20 13:12:06,685 | INFO     | ..............................
[2025-02-20 14:12:21] 2025-02-20 13:12:06,685 | INFO     | . Timing measurements:
[2025-02-20 14:12:21] 2025-02-20 13:12:06,685 | INFO     | . get job = 0 s
[2025-02-20 14:12:21] 2025-02-20 13:12:06,685 | INFO     | . initial setup = 1 s
[2025-02-20 14:12:21] 2025-02-20 13:12:06,685 | INFO     | . payload setup = 5 s
[2025-02-20 14:12:21] 2025-02-20 13:12:06,685 | INFO     | . stage-in = 0 s
[2025-02-20 14:12:21] 2025-02-20 13:12:06,685 | INFO     | . payload execution = 31340 s
[2025-02-20 14:12:21] 2025-02-20 13:12:06,686 | INFO     | . stage-out = 1 s
[2025-02-20 14:12:21] 2025-02-20 13:12:06,686 | INFO     | . log creation = 0 s
[2025-02-20 14:12:21] 2025-02-20 13:12:06,686 | INFO     | ..............................
[2025-02-20 14:12:21] 2025-02-20 13:12:06,803 | INFO     | 
[2025-02-20 14:12:21] 2025-02-20 13:12:06,803 | INFO     | job summary report
[2025-02-20 14:12:21] 2025-02-20 13:12:06,804 | INFO     | --------------------------------------------------
[2025-02-20 14:12:21] 2025-02-20 13:12:06,804 | INFO     | PanDA job id: 6519088371
[2025-02-20 14:12:21] 2025-02-20 13:12:06,804 | INFO     | task id: 43205075
[2025-02-20 14:12:21] 2025-02-20 13:12:06,804 | INFO     | errors: (none)
[2025-02-20 14:12:21] 2025-02-20 13:12:06,804 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-20 14:12:21] 2025-02-20 13:12:06,804 | INFO     | pilot state: finished 
[2025-02-20 14:12:21] 2025-02-20 13:12:06,804 | INFO     | transexitcode: 0
[2025-02-20 14:12:21] 2025-02-20 13:12:06,804 | INFO     | exeerrorcode: 0
[2025-02-20 14:12:21] 2025-02-20 13:12:06,805 | INFO     | exeerrordiag: 
[2025-02-20 14:12:21] 2025-02-20 13:12:06,805 | INFO     | exitcode: 0
[2025-02-20 14:12:21] 2025-02-20 13:12:06,805 | INFO     | exitmsg: OK
[2025-02-20 14:12:21] 2025-02-20 13:12:06,805 | INFO     | cpuconsumptiontime: 119685 s
[2025-02-20 14:12:21] 2025-02-20 13:12:06,805 | INFO     | nevents: 400
[2025-02-20 14:12:21] 2025-02-20 13:12:06,805 | INFO     | neventsw: 0
[2025-02-20 14:12:21] 2025-02-20 13:12:06,805 | INFO     | pid: 2532675
[2025-02-20 14:12:21] 2025-02-20 13:12:06,805 | INFO     | pgrp: 2532675
[2025-02-20 14:12:21] 2025-02-20 13:12:06,806 | INFO     | corecount: 4
[2025-02-20 14:12:21] 2025-02-20 13:12:06,806 | INFO     | event service: False
[2025-02-20 14:12:21] 2025-02-20 13:12:06,806 | INFO     | sizes: {0: 2389110, 1: 2389365, 5: 2389571, 12: 2389627, 31349: 2427700, 31351: 2436847, 31357: 2436961}
[2025-02-20 14:12:21] 2025-02-20 13:12:06,806 | INFO     | --------------------------------------------------
[2025-02-20 14:12:21] 2025-02-20 13:12:06,806 | INFO     | 
[2025-02-20 14:12:21] 2025-02-20 13:12:06,806 | INFO     | executing command: ls -lF /scratch/boinc/var/slot12/slots/0
[2025-02-20 14:12:21] 2025-02-20 13:12:06,824 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-20 14:12:21] 2025-02-20 13:12:06,824 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-20 14:12:21] 2025-02-20 13:12:06,824 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-20 14:12:21] 2025-02-20 13:12:06,824 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-20 14:12:21] 2025-02-20 13:12:06,824 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-20 14:12:21] 2025-02-20 13:12:06,825 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-20 14:12:21] 2025-02-20 13:12:06,825 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-20 14:12:21] 2025-02-20 13:12:06,825 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-20 14:12:21] 2025-02-20 13:12:06,825 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-20 14:12:21] 2025-02-20 13:12:06,825 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-20 14:12:21] 2025-02-20 13:12:06,825 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-20 14:12:21] 2025-02-20 13:12:06,826 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-20 14:12:21] 2025-02-20 13:12:06,826 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-20 14:12:21] 2025-02-20 13:12:06,826 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-20 14:12:21] 2025-02-20 13:12:06,826 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-20 14:12:21] 2025-02-20 13:12:06,826 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-20 14:12:21] 2025-02-20 13:12:06,826 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-20 14:12:21] 2025-02-20 13:12:06,826 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-20 14:12:21] 2025-02-20 13:12:06,826 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-20 14:12:21] 2025-02-20 13:12:06,827 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-20 14:12:21] 2025-02-20 13:12:06,827 | INFO     | job 6519088371 has completed (purged errors)
[2025-02-20 14:12:21] 2025-02-20 13:12:06,827 | INFO     | overall cleanup function is called
[2025-02-20 14:12:21] 2025-02-20 13:12:06,985 | INFO     | PID=2525898 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-20 14:12:21] 2025-02-20 13:12:06,985 | INFO     | .. there are 8 such processes running
[2025-02-20 14:12:21] 2025-02-20 13:12:07,836 | INFO     | --- collectZombieJob: --- 10, [2532675]
[2025-02-20 14:12:21] 2025-02-20 13:12:07,837 | INFO     | zombie collector waiting for pid 2532675
[2025-02-20 14:12:21] 2025-02-20 13:12:07,837 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-20 14:12:21] 2025-02-20 13:12:07,837 | INFO     | collected zombie processes
[2025-02-20 14:12:21] 2025-02-20 13:12:07,837 | INFO     | will attempt to kill all subprocesses of pid=2532675
[2025-02-20 14:12:21] 2025-02-20 13:12:07,964 | INFO     | process IDs to be killed: [2532675] (in reverse order)
[2025-02-20 14:12:21] 2025-02-20 13:12:08,048 | WARNING  | found no corresponding commands to process id(s)
[2025-02-20 14:12:21] 2025-02-20 13:12:08,048 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-20 14:12:21] 2025-02-20 13:12:08,055 | INFO     | did not find any defunct processes belonging to 2532675
[2025-02-20 14:12:21] 2025-02-20 13:12:08,062 | INFO     | did not find any defunct processes belonging to 2532675
[2025-02-20 14:12:21] 2025-02-20 13:12:08,062 | INFO     | ready for new job
[2025-02-20 14:12:21] 2025-02-20 13:12:08,062 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-20 14:12:21] 2025-02-20 13:12:08,065 | INFO     | **************************************
[2025-02-20 14:12:21] 2025-02-20 13:12:08,065 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-20 14:12:21] 2025-02-20 13:12:08,065 | INFO     | **************************************
[2025-02-20 14:12:21] 2025-02-20 13:12:08,065 | INFO     | 
[2025-02-20 14:12:21] 2025-02-20 13:12:08,068 | INFO     | architecture information:
[2025-02-20 14:12:21] 2025-02-20 13:12:08,068 | INFO     | executing command: cat /etc/os-release
[2025-02-20 14:12:21] 2025-02-20 13:12:08,082 | INFO     | cat /etc/os-release:
[2025-02-20 14:12:21] NAME="CentOS Linux"
[2025-02-20 14:12:21] VERSION="7 (Core)"
[2025-02-20 14:12:21] ID="centos"
[2025-02-20 14:12:21] ID_LIKE="rhel fedora"
[2025-02-20 14:12:21] VERSION_ID="7"
[2025-02-20 14:12:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-20 14:12:21] ANSI_COLOR="0;31"
[2025-02-20 14:12:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-20 14:12:21] HOME_URL="https://www.centos.org/"
[2025-02-20 14:12:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-20 14:12:21] 
[2025-02-20 14:12:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-20 14:12:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-20 14:12:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-20 14:12:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-20 14:12:21] 
[2025-02-20 14:12:21] 2025-02-20 13:12:08,083 | INFO     | **************************************
[2025-02-20 14:12:21] 2025-02-20 13:12:08,585 | INFO     | executing command: df -mP /scratch/boinc/var/slot12/slots/0
[2025-02-20 14:12:21] 2025-02-20 13:12:08,601 | INFO     | sufficient remaining disk space (1660753543168 B)
[2025-02-20 14:12:21] 2025-02-20 13:12:08,601 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-20 14:12:21] 2025-02-20 13:12:08,601 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-20 14:12:21] 2025-02-20 13:12:08,602 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-20 14:12:21] 2025-02-20 13:12:08,777 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-20 14:12:21] 2025-02-20 13:12:08,778 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-20 14:12:21] 2025-02-20 13:12:08,778 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-20 14:12:21] 2025-02-20 13:12:08,778 | INFO     | will abort loop
[2025-02-20 14:12:21] 2025-02-20 13:12:08,914 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-20 14:12:21] 2025-02-20 13:12:08,990 | INFO     | found 0 job(s) in 20 queues
[2025-02-20 14:12:21] 2025-02-20 13:12:08,991 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-20 14:12:21] 2025-02-20 13:12:08,991 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-20 14:12:21] 2025-02-20 13:12:09,077 | INFO     | all data control threads have been joined
[2025-02-20 14:12:21] 2025-02-20 13:12:09,429 | INFO     | all job control threads have been joined
[2025-02-20 14:12:21] 2025-02-20 13:12:09,502 | INFO     | all payload control threads have been joined
[2025-02-20 14:12:21] 2025-02-20 13:12:09,606 | INFO     | [job] retrieve thread has finished
[2025-02-20 14:12:21] 2025-02-20 13:12:09,607 | INFO     | [job] queue monitor thread has finished
[2025-02-20 14:12:21] 2025-02-20 13:12:09,781 | INFO     | [job] job monitor thread has finished
[2025-02-20 14:12:21] 2025-02-20 13:12:09,981 | INFO     | [payload] validate_post thread has finished
[2025-02-20 14:12:21] 2025-02-20 13:12:10,081 | INFO     | [data] control thread has finished
[2025-02-20 14:12:21] 2025-02-20 13:12:10,338 | INFO     | [payload] execute_payloads thread has finished
[2025-02-20 14:12:21] 2025-02-20 13:12:10,434 | INFO     | [job] control thread has finished
[2025-02-20 14:12:21] 2025-02-20 13:12:10,508 | INFO     | [payload] control thread has finished
[2025-02-20 14:12:21] 2025-02-20 13:12:10,573 | INFO     | [job] create_data_payload thread has finished
[2025-02-20 14:12:21] 2025-02-20 13:12:10,644 | INFO     | [payload] validate_pre thread has finished
[2025-02-20 14:12:21] 2025-02-20 13:12:10,759 | INFO     | [data] copytool_in thread has finished
[2025-02-20 14:12:21] 2025-02-20 13:12:10,866 | INFO     | [job] validate thread has finished
[2025-02-20 14:12:21] 2025-02-20 13:12:10,895 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-20 14:12:21] 2025-02-20 13:12:10,919 | INFO     | [data] copytool_out thread has finished
[2025-02-20 14:12:21] 2025-02-20 13:12:11,140 | INFO     | [payload] failed_post thread has finished
[2025-02-20 14:12:21] 2025-02-20 13:12:11,548 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-20 14:12:21] 2025-02-20 13:12:15,553 | INFO     | [data] queue_monitor thread has finished
[2025-02-20 14:12:21] 2025-02-20 13:12:15,898 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23405681391424)>', '<ExcThread(monitor, started 23405443110656)>']
[2025-02-20 14:12:21] 2025-02-20 13:12:16,025 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-20 14:12:21] 2025-02-20 13:12:16,026 | INFO     | [monitor] control thread has ended
[2025-02-20 14:12:21] 2025-02-20 13:12:20,913 | INFO     | all workflow threads have been joined
[2025-02-20 14:12:21] 2025-02-20 13:12:20,913 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-20 14:12:21] 2025-02-20 13:12:20,913 | INFO     | traces error code: 0
[2025-02-20 14:12:21] 2025-02-20 13:12:20,914 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-20 14:12:21] 2025-02-20 13:12:21,037 [wrapper] ==== pilot stdout END ====
[2025-02-20 14:12:21] 2025-02-20 13:12:21,040 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-20 14:12:21] 2025-02-20 13:12:21,043 [wrapper] pilotpid: 2525898
[2025-02-20 14:12:21] 2025-02-20 13:12:21,045 [wrapper] Pilot exit status: 0
[2025-02-20 14:12:21] 2025-02-20 13:12:21,055 [wrapper] pandaids: 6519088371
[2025-02-20 14:12:21] 2025-02-20 13:12:21,103 [wrapper] cleanup supervisor_pilot 3372276 2525899
[2025-02-20 14:12:21] 2025-02-20 13:12:21,105 [wrapper] Test setup, not cleaning
[2025-02-20 14:12:21] 2025-02-20 13:12:21,111 [wrapper] apfmon messages muted
[2025-02-20 14:12:21] 2025-02-20 13:12:21,113 [wrapper] ==== wrapper stdout END ====
[2025-02-20 14:12:21] 2025-02-20 13:12:21,116 [wrapper] ==== wrapper stderr END ====
[2025-02-20 14:12:21]  *** Error codes and diagnostics ***
[2025-02-20 14:12:21]     "exeErrorCode": 0,
[2025-02-20 14:12:21]     "exeErrorDiag": "",
[2025-02-20 14:12:21]     "pilotErrorCode": 0,
[2025-02-20 14:12:21]     "pilotErrorDiag": "",
[2025-02-20 14:12:21]  *** Listing of results directory ***
[2025-02-20 14:12:21] total 671788
[2025-02-20 14:12:21] -rw-r--r-- 1 boinc boinc    491065 Feb 19 18:27 pilot3.tar.gz
[2025-02-20 14:12:21] -rw-r--r-- 1 boinc boinc      5118 Feb 19 18:34 queuedata.json
[2025-02-20 14:12:21] -rwx------ 1 boinc boinc     35865 Feb 19 18:38 runpilot2-wrapper.sh
[2025-02-20 14:12:21] -rw-r--r-- 1 boinc boinc       100 Feb 20 05:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-20 14:12:21] -rwxr-xr-x 1 boinc boinc      7986 Feb 20 05:29 run_atlas
[2025-02-20 14:12:21] -rw-r--r-- 1 boinc boinc       105 Feb 20 05:29 job.xml
[2025-02-20 14:12:21] -rw-r--r-- 1 boinc boinc      6421 Feb 20 05:29 init_data.xml
[2025-02-20 14:12:21] -rw-r--r-- 2 boinc boinc 344740317 Feb 20 05:29 EVNT.43092757._000823.pool.root.1
[2025-02-20 14:12:21] -rw-r--r-- 2 boinc boinc     17569 Feb 20 05:29 start_atlas.sh
[2025-02-20 14:12:21] drwxrwx--x 2 boinc boinc      4096 Feb 20 05:29 shared
[2025-02-20 14:12:21] -rw-r--r-- 2 boinc boinc    503561 Feb 20 05:29 input.tar.gz
[2025-02-20 14:12:21] -rw-r--r-- 1 boinc boinc         0 Feb 20 05:29 boinc_lockfile
[2025-02-20 14:12:21] -rw-r--r-- 1 boinc boinc      2556 Feb 20 05:29 pandaJob.out
[2025-02-20 14:12:21] -rw------- 1 boinc boinc       424 Feb 20 05:29 setup.sh.local
[2025-02-20 14:12:21] -rw------- 1 boinc boinc    985845 Feb 20 05:29 agis_schedconf.cvmfs.json
[2025-02-20 14:12:21] drwx------ 4 boinc boinc      4096 Feb 20 05:29 pilot3
[2025-02-20 14:12:21] -rw------- 1 boinc boinc 331042846 Feb 20 14:11 HITS.43205075._051429.pool.root.1
[2025-02-20 14:12:21] -rw-r--r-- 1 boinc boinc       533 Feb 20 14:11 boinc_task_state.xml
[2025-02-20 14:12:21] -rw-r--r-- 1 boinc boinc        29 Feb 20 14:11 wrapper_checkpoint.txt
[2025-02-20 14:12:21] -rw------- 1 boinc boinc      1036 Feb 20 14:11 memory_monitor_summary.json
[2025-02-20 14:12:21] -rw------- 1 boinc boinc   1586690 Feb 20 14:12 agis_ddmendpoints.agis.ALL.json
[2025-02-20 14:12:21] -rw------- 1 boinc boinc    558811 Feb 20 14:12 log.43205075._051429.job.log.tgz.1
[2025-02-20 14:12:21] -rw------- 1 boinc boinc        95 Feb 20 14:12 pilot_heartbeat.json
[2025-02-20 14:12:21] -rw------- 1 boinc boinc      7748 Feb 20 14:12 heartbeat.json
[2025-02-20 14:12:21] -rw------- 1 boinc boinc      4412 Feb 20 14:12 pilotlog.txt
[2025-02-20 14:12:21] -rw-r--r-- 1 boinc boinc      8192 Feb 20 14:12 boinc_mmap_file
[2025-02-20 14:12:21] -rw------- 1 boinc boinc   3604021 Feb 20 14:12 log.43205075._051429.job.log.1
[2025-02-20 14:12:21] -rw------- 1 boinc boinc       357 Feb 20 14:12 output.list
[2025-02-20 14:12:21] -rw-r--r-- 1 boinc boinc       620 Feb 20 14:12 runtime_log
[2025-02-20 14:12:21] -rw------- 1 boinc boinc   4177920 Feb 20 14:12 result.tar.gz
[2025-02-20 14:12:21] -rw-r--r-- 1 boinc boinc     11424 Feb 20 14:12 runtime_log.err
[2025-02-20 14:12:21] -rw------- 1 boinc boinc       667 Feb 20 14:12 CW0LDmSC346nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmBToKDmtQTE6n.diag
[2025-02-20 14:12:21] -rw-r--r-- 1 boinc boinc     21440 Feb 20 14:12 stderr.txt
[2025-02-20 14:12:21] HITS file was successfully produced:
[2025-02-20 14:12:21] -rw------- 1 boinc boinc 331042846 Feb 20 14:11 shared/HITS.pool.root.1
[2025-02-20 14:12:21]  *** Contents of shared directory: ***
[2025-02-20 14:12:21] total 664548
[2025-02-20 14:12:21] -rw-r--r-- 2 boinc boinc 344740317 Feb 20 05:29 ATLAS.root_0
[2025-02-20 14:12:21] -rw-r--r-- 2 boinc boinc     17569 Feb 20 05:29 start_atlas.sh
[2025-02-20 14:12:21] -rw-r--r-- 2 boinc boinc    503561 Feb 20 05:29 input.tar.gz
[2025-02-20 14:12:21] -rw------- 1 boinc boinc 331042846 Feb 20 14:11 HITS.pool.root.1
[2025-02-20 14:12:21] -rw------- 1 boinc boinc   4177920 Feb 20 14:12 result.tar.gz
14:12:22 (2522301): run_atlas exited; CPU time 119859.655609
14:12:22 (2522301): called boinc_finish(0)

</stderr_txt>
]]>

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