Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:21:32 (41650): wrapper (7.7.26015): starting
15:21:32 (41650): wrapper: running run_atlas (--nthreads 10)
[2025-02-19 15:21:32] Arguments: --nthreads 10
[2025-02-19 15:21:32] Threads: 10
[2025-02-19 15:21:32] Checking for CVMFS
[2025-02-19 15:21:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-19 15:21:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-19 15:21:34] Running cvmfs_config stat atlas.cern.ch
[2025-02-19 15:21:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-19 15:21:35] 2.11.2.0 41627 140906 566576 142837 0 100 11389092 18432000 8179 130560 0 40977352 99.131 80544256 47055 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-19 15:21:35] CVMFS is ok
[2025-02-19 15:21:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-19 15:21:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-19 15:21:35] Further information can be found at the LHC@home message board.
[2025-02-19 15:21:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-19 15:21:35] Checking for apptainer binary...
[2025-02-19 15:21:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-19 15:21:35] Running /usr/bin/apptainer --version
[2025-02-19 15:21:35] apptainer version 1.3.2-1.el7
[2025-02-19 15:21:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-19 15:22:00] c-211-25.aglt2.org
[2025-02-19 15:22:00] apptainer works
[2025-02-19 15:22:00] Set ATHENA_PROC_NUMBER=10
[2025-02-19 15:22:00] Set ATHENA_CORE_NUMBER=10
[2025-02-19 15:22:00] Starting ATLAS job with PandaID=6519086685
[2025-02-19 15:22:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-20 20:37:28]  *** The last 200 lines of the pilot log: ***
[2025-02-20 20:37:28] 2025-02-21 01:37:06,595 | INFO     | mean x: 1740049323.0926034
[2025-02-20 20:37:28] 2025-02-21 01:37:06,595 | INFO     | mean y: 2635911.5532906232
[2025-02-20 20:37:28] 2025-02-21 01:37:06,595 | INFO     | -- intersect: -2795495085.648917
[2025-02-20 20:37:28] 2025-02-21 01:37:06,596 | INFO     | intersect: -2795495085.648917
[2025-02-20 20:37:28] 2025-02-21 01:37:06,600 | INFO     | chi2: 14.417750428310425
[2025-02-20 20:37:28] 2025-02-21 01:37:06,604 | INFO     | model: linear, x: [1739996984.0, 1739997045.0, 1739997106.0, 1739997167.0, 1739997228.0, 1739997289.0, 1739997350.0, 1739997411.0, 1739997472.0, 1739997533.0, 1739
[2025-02-20 20:37:28] 2025-02-21 01:37:06,608 | INFO     | sum of square deviations: 1555947242168.671
[2025-02-20 20:37:28] 2025-02-21 01:37:06,928 | INFO     | monitor loop #6216: job 0:6519086685 is in state 'finished'
[2025-02-20 20:37:28] 2025-02-21 01:37:06,930 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-20 20:37:28] 2025-02-21 01:37:06,939 | INFO     | sum of deviations: 3146202295022.518
[2025-02-20 20:37:28] 2025-02-21 01:37:06,941 | INFO     | mean x: 1740049170.5946262
[2025-02-20 20:37:28] 2025-02-21 01:37:06,942 | INFO     | mean y: 2642850.882593458
[2025-02-20 20:37:28] 2025-02-21 01:37:06,942 | INFO     | -- intersect: -3515822650.779563
[2025-02-20 20:37:28] 2025-02-21 01:37:06,942 | INFO     | intersect: -3515822650.779563
[2025-02-20 20:37:28] 2025-02-21 01:37:06,949 | INFO     | chi2: 10.375773407351403
[2025-02-20 20:37:28] 2025-02-21 01:37:06,952 | INFO     | current chi2=10.375773407351403 (change=28.034727338755093 %)
[2025-02-20 20:37:28] 2025-02-21 01:37:06,956 | INFO     | model: linear, x: [1739996984.0, 1739997045.0, 1739997106.0, 1739997167.0, 1739997228.0, 1739997289.0, 1739997350.0, 1739997411.0, 1739997472.0, 1739997533.0, 1739
[2025-02-20 20:37:28] 2025-02-21 01:37:06,962 | INFO     | sum of square deviations: 1542355037942.6614
[2025-02-20 20:37:28] 2025-02-21 01:37:07,205 | INFO     | sum of deviations: 3133801538395.2876
[2025-02-20 20:37:28] 2025-02-21 01:37:07,205 | INFO     | mean x: 1740049018.0978324
[2025-02-20 20:37:28] 2025-02-21 01:37:07,207 | INFO     | mean y: 2642711.7527826596
[2025-02-20 20:37:28] 2025-02-21 01:37:07,208 | INFO     | -- intersect: -3532839168.6525745
[2025-02-20 20:37:28] 2025-02-21 01:37:07,208 | INFO     | intersect: -3532839168.6525745
[2025-02-20 20:37:28] 2025-02-21 01:37:07,212 | INFO     | chi2: 10.375791049988925
[2025-02-20 20:37:28] 2025-02-21 01:37:07,214 | INFO     | current chi2=10.375791049988925 (change=-0.0001700368428350158 %)
[2025-02-20 20:37:28] 2025-02-21 01:37:07,215 | INFO     | right removable region: 1706
[2025-02-20 20:37:28] 2025-02-21 01:37:07,219 | INFO     | model: linear, x: [1739997289.0, 1739997350.0, 1739997411.0, 1739997472.0, 1739997533.0, 1739997594.0, 1739997655.0, 1739997716.0, 1739997777.0, 1739997838.0, 1739
[2025-02-20 20:37:28] 2025-02-21 01:37:07,221 | INFO     | sum of square deviations: 1555946307280.2913
[2025-02-20 20:37:28] 2025-02-21 01:37:07,468 | INFO     | sum of deviations: 1895982972622.2622
[2025-02-20 20:37:28] 2025-02-21 01:37:07,468 | INFO     | mean x: 1740049475.5957944
[2025-02-20 20:37:28] 2025-02-21 01:37:07,468 | INFO     | mean y: 2642916.0928738317
[2025-02-20 20:37:28] 2025-02-21 01:37:07,469 | INFO     | -- intersect: -2117677150.1030965
[2025-02-20 20:37:28] 2025-02-21 01:37:07,470 | INFO     | intersect: -2117677150.1030965
[2025-02-20 20:37:28] 2025-02-21 01:37:07,474 | INFO     | chi2: 10.156170442907277
[2025-02-20 20:37:28] 2025-02-21 01:37:07,476 | INFO     | current chi2=10.156170442907277 (change=29.557870394504747 %)
[2025-02-20 20:37:28] 2025-02-21 01:37:07,479 | INFO     | model: linear, x: [1739997594.0, 1739997655.0, 1739997716.0, 1739997777.0, 1739997838.0, 1739997899.0, 1739997960.0, 1739998021.0, 1739998082.0, 1739998143.0, 1739
[2025-02-20 20:37:28] 2025-02-21 01:37:07,481 | INFO     | sum of square deviations: 1542352959304.2668
[2025-02-20 20:37:28] 2025-02-21 01:37:07,571 | INFO     | PID=49006 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-20 20:37:28] 2025-02-21 01:37:07,571 | INFO     | .. there are 7 such processes running
[2025-02-20 20:37:28] 2025-02-21 01:37:07,674 | INFO     | sum of deviations: 1422926321537.6418
[2025-02-20 20:37:28] 2025-02-21 01:37:07,675 | INFO     | mean x: 1740049628.099004
[2025-02-20 20:37:28] 2025-02-21 01:37:07,676 | INFO     | mean y: 2648222.2624487407
[2025-02-20 20:37:28] 2025-02-21 01:37:07,676 | INFO     | -- intersect: -1602666826.8432555
[2025-02-20 20:37:28] 2025-02-21 01:37:07,676 | INFO     | intersect: -1602666826.8432555
[2025-02-20 20:37:28] 2025-02-21 01:37:07,681 | INFO     | chi2: 7.772235613308365
[2025-02-20 20:37:28] 2025-02-21 01:37:07,682 | INFO     | current chi2=7.772235613308365 (change=23.472772961030504 %)
[2025-02-20 20:37:28] 2025-02-21 01:37:07,682 | INFO     | left removable region: 20
[2025-02-20 20:37:28] 2025-02-21 01:37:07,686 | INFO     | model: linear, x: [1739998204.0, 1739998265.0, 1739998326.0, 1739998387.0, 1739998448.0, 1739998509.0, 1739998570.0, 1739998631.0, 1739998692.0, 1739998753.0, 1739
[2025-02-20 20:37:28] 2025-02-21 01:37:07,688 | INFO     | sum of square deviations: 1486127512210.537
[2025-02-20 20:37:28] 2025-02-21 01:37:08,028 | INFO     | sum of deviations: 1293244567927.0422
[2025-02-20 20:37:28] 2025-02-21 01:37:08,030 | INFO     | mean x: 1740049597.6115065
[2025-02-20 20:37:28] 2025-02-21 01:37:08,030 | INFO     | mean y: 2663603.1832740214
[2025-02-20 20:37:28] 2025-02-21 01:37:08,030 | INFO     | -- intersect: -1511546766.7516034
[2025-02-20 20:37:28] 2025-02-21 01:37:08,030 | INFO     | intersect: -1511546766.7516034
[2025-02-20 20:37:28] 2025-02-21 01:37:08,036 | INFO     | chi2: 0.8104010666210905
[2025-02-20 20:37:28] 2025-02-21 01:37:08,036 | INFO     | -- intersect: -1511546766.7516034
[2025-02-20 20:37:28] 2025-02-21 01:37:08,037 | INFO     | current memory leak: 0.87 B/s (using 1686 data points, chi2=0.81)
[2025-02-20 20:37:28] 2025-02-21 01:37:08,043 | INFO     | ..............................
[2025-02-20 20:37:28] 2025-02-21 01:37:08,044 | INFO     | . Timing measurements:
[2025-02-20 20:37:28] 2025-02-21 01:37:08,044 | INFO     | . get job = 1 s
[2025-02-20 20:37:28] 2025-02-21 01:37:08,044 | INFO     | . initial setup = 7 s
[2025-02-20 20:37:28] 2025-02-21 01:37:08,044 | INFO     | . payload setup = 106 s
[2025-02-20 20:37:28] 2025-02-21 01:37:08,044 | INFO     | . stage-in = 0 s
[2025-02-20 20:37:28] 2025-02-21 01:37:08,045 | INFO     | . payload execution = 104833 s
[2025-02-20 20:37:28] 2025-02-21 01:37:08,046 | INFO     | . stage-out = 18 s
[2025-02-20 20:37:28] 2025-02-21 01:37:08,046 | INFO     | . log creation = 10 s
[2025-02-20 20:37:28] 2025-02-21 01:37:08,046 | INFO     | ..............................
[2025-02-20 20:37:28] 2025-02-21 01:37:08,559 | INFO     | 
[2025-02-20 20:37:28] 2025-02-21 01:37:08,559 | INFO     | job summary report
[2025-02-20 20:37:28] 2025-02-21 01:37:08,559 | INFO     | --------------------------------------------------
[2025-02-20 20:37:28] 2025-02-21 01:37:08,559 | INFO     | PanDA job id: 6519086685
[2025-02-20 20:37:28] 2025-02-21 01:37:08,559 | INFO     | task id: 43205075
[2025-02-20 20:37:28] 2025-02-21 01:37:08,560 | INFO     | errors: (none)
[2025-02-20 20:37:28] 2025-02-21 01:37:08,560 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-20 20:37:28] 2025-02-21 01:37:08,560 | INFO     | pilot state: finished 
[2025-02-20 20:37:28] 2025-02-21 01:37:08,560 | INFO     | transexitcode: 0
[2025-02-20 20:37:28] 2025-02-21 01:37:08,562 | INFO     | exeerrorcode: 0
[2025-02-20 20:37:28] 2025-02-21 01:37:08,563 | INFO     | exeerrordiag: 
[2025-02-20 20:37:28] 2025-02-21 01:37:08,563 | INFO     | exitcode: 0
[2025-02-20 20:37:28] 2025-02-21 01:37:08,563 | INFO     | exitmsg: OK
[2025-02-20 20:37:28] 2025-02-21 01:37:08,563 | INFO     | cpuconsumptiontime: 192231 s
[2025-02-20 20:37:28] 2025-02-21 01:37:08,563 | INFO     | nevents: 400
[2025-02-20 20:37:28] 2025-02-21 01:37:08,563 | INFO     | neventsw: 0
[2025-02-20 20:37:28] 2025-02-21 01:37:08,564 | INFO     | pid: 15463
[2025-02-20 20:37:28] 2025-02-21 01:37:08,564 | INFO     | pgrp: 15463
[2025-02-20 20:37:28] 2025-02-21 01:37:08,564 | INFO     | corecount: 10
[2025-02-20 20:37:28] 2025-02-21 01:37:08,564 | INFO     | event service: False
[2025-02-20 20:37:28] 2025-02-21 01:37:08,564 | INFO     | sizes: {0: 2388548, 1: 2389233, 2: 2389233, 3: 2389460, 15: 2389460, 26: 2389488, 37: 2389644, 48: 2389672, 57: 2389906, 60: 2389934, 104944: 2460104, 104946: 2460
[2025-02-20 20:37:28] 2025-02-21 01:37:08,566 | INFO     | --------------------------------------------------
[2025-02-20 20:37:28] 2025-02-21 01:37:08,567 | INFO     | 
[2025-02-20 20:37:28] 2025-02-21 01:37:08,567 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-20 20:37:28] 2025-02-21 01:37:08,934 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-20 20:37:28] 2025-02-21 01:37:08,935 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-20 20:37:28] 2025-02-21 01:37:08,935 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-20 20:37:28] 2025-02-21 01:37:08,935 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-20 20:37:28] 2025-02-21 01:37:08,935 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-20 20:37:28] 2025-02-21 01:37:08,935 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-20 20:37:28] 2025-02-21 01:37:08,936 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-20 20:37:28] 2025-02-21 01:37:08,936 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-20 20:37:28] 2025-02-21 01:37:08,936 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-20 20:37:28] 2025-02-21 01:37:08,936 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-20 20:37:28] 2025-02-21 01:37:08,936 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-20 20:37:28] 2025-02-21 01:37:08,961 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-20 20:37:28] 2025-02-21 01:37:08,961 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-20 20:37:28] 2025-02-21 01:37:08,961 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-20 20:37:28] 2025-02-21 01:37:08,961 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-20 20:37:28] 2025-02-21 01:37:08,961 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-20 20:37:28] 2025-02-21 01:37:08,962 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-20 20:37:28] 2025-02-21 01:37:08,962 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-20 20:37:28] 2025-02-21 01:37:08,962 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-20 20:37:28] 2025-02-21 01:37:08,962 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-20 20:37:28] 2025-02-21 01:37:08,962 | INFO     | job 6519086685 has completed (purged errors)
[2025-02-20 20:37:28] 2025-02-21 01:37:08,964 | INFO     | overall cleanup function is called
[2025-02-20 20:37:28] 2025-02-21 01:37:09,983 | INFO     | --- collectZombieJob: --- 10, [15463]
[2025-02-20 20:37:28] 2025-02-21 01:37:09,983 | INFO     | zombie collector waiting for pid 15463
[2025-02-20 20:37:28] 2025-02-21 01:37:09,983 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-20 20:37:28] 2025-02-21 01:37:09,992 | INFO     | collected zombie processes
[2025-02-20 20:37:28] 2025-02-21 01:37:09,993 | INFO     | will attempt to kill all subprocesses of pid=15463
[2025-02-20 20:37:28] 2025-02-21 01:37:10,558 | INFO     | process IDs to be killed: [15463] (in reverse order)
[2025-02-20 20:37:28] 2025-02-21 01:37:12,751 | WARNING  | found no corresponding commands to process id(s)
[2025-02-20 20:37:28] 2025-02-21 01:37:12,751 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-20 20:37:28] 2025-02-21 01:37:12,773 | INFO     | did not find any defunct processes belonging to 15463
[2025-02-20 20:37:28] 2025-02-21 01:37:12,790 | INFO     | did not find any defunct processes belonging to 15463
[2025-02-20 20:37:28] 2025-02-21 01:37:12,790 | INFO     | ready for new job
[2025-02-20 20:37:28] 2025-02-21 01:37:12,791 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-20 20:37:28] 2025-02-21 01:37:13,072 | INFO     | **************************************
[2025-02-20 20:37:28] 2025-02-21 01:37:13,072 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-20 20:37:28] 2025-02-21 01:37:13,072 | INFO     | **************************************
[2025-02-20 20:37:28] 2025-02-21 01:37:13,073 | INFO     | 
[2025-02-20 20:37:28] 2025-02-21 01:37:13,117 | INFO     | architecture information:
[2025-02-20 20:37:28] 2025-02-21 01:37:13,166 | INFO     | executing command: cat /etc/os-release
[2025-02-20 20:37:28] 2025-02-21 01:37:13,399 | INFO     | cat /etc/os-release:
[2025-02-20 20:37:28] NAME="CentOS Linux"
[2025-02-20 20:37:28] VERSION="7 (Core)"
[2025-02-20 20:37:28] ID="centos"
[2025-02-20 20:37:28] ID_LIKE="rhel fedora"
[2025-02-20 20:37:28] VERSION_ID="7"
[2025-02-20 20:37:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-20 20:37:28] ANSI_COLOR="0;31"
[2025-02-20 20:37:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-20 20:37:28] HOME_URL="https://www.centos.org/"
[2025-02-20 20:37:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-20 20:37:28] 
[2025-02-20 20:37:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-20 20:37:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-20 20:37:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-20 20:37:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-20 20:37:28] 
[2025-02-20 20:37:28] 2025-02-21 01:37:13,400 | INFO     | **************************************
[2025-02-20 20:37:28] 2025-02-21 01:37:13,904 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-20 20:37:28] 2025-02-21 01:37:14,231 | INFO     | sufficient remaining disk space (56191090688 B)
[2025-02-20 20:37:28] 2025-02-21 01:37:14,232 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-20 20:37:28] 2025-02-21 01:37:14,232 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-20 20:37:28] 2025-02-21 01:37:14,253 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-20 20:37:28] 2025-02-21 01:37:14,260 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-20 20:37:28] 2025-02-21 01:37:14,261 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-20 20:37:28] 2025-02-21 01:37:14,261 | INFO     | found 0 job(s) in 20 queues
[2025-02-20 20:37:28] 2025-02-21 01:37:14,261 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-20 20:37:28] 2025-02-21 01:37:14,261 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-20 20:37:28] 2025-02-21 01:37:14,506 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-20 20:37:28] 2025-02-21 01:37:14,510 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-20 20:37:28] 2025-02-21 01:37:14,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-20 20:37:28] 2025-02-21 01:37:14,511 | INFO     | will abort loop
[2025-02-20 20:37:28] 2025-02-21 01:37:15,216 | INFO     | all job control threads have been joined
[2025-02-20 20:37:28] 2025-02-21 01:37:15,238 | INFO     | [job] retrieve thread has finished
[2025-02-20 20:37:28] 2025-02-21 01:37:15,267 | INFO     | [job] queue monitor thread has finished
[2025-02-20 20:37:28] 2025-02-21 01:37:15,297 | INFO     | all data control threads have been joined
[2025-02-20 20:37:28] 2025-02-21 01:37:15,517 | INFO     | [job] job monitor thread has finished
[2025-02-20 20:37:28] 2025-02-21 01:37:15,526 | INFO     | [payload] validate_post thread has finished
[2025-02-20 20:37:28] 2025-02-21 01:37:15,560 | INFO     | [job] create_data_payload thread has finished
[2025-02-20 20:37:28] 2025-02-21 01:37:15,633 | INFO     | all payload control threads have been joined
[2025-02-20 20:37:28] 2025-02-21 01:37:15,673 | INFO     | [payload] execute_payloads thread has finished
[2025-02-20 20:37:28] 2025-02-21 01:37:15,683 | INFO     | [payload] validate_pre thread has finished
[2025-02-20 20:37:28] 2025-02-21 01:37:15,692 | INFO     | [data] copytool_in thread has finished
[2025-02-20 20:37:28] 2025-02-21 01:37:15,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-20 20:37:28] 2025-02-21 01:37:15,942 | INFO     | [payload] failed_post thread has finished
[2025-02-20 20:37:28] 2025-02-21 01:37:15,981 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-20 20:37:28] 2025-02-21 01:37:16,223 | INFO     | [job] control thread has finished
[2025-02-20 20:37:28] 2025-02-21 01:37:16,304 | INFO     | [data] control thread has finished
[2025-02-20 20:37:28] 2025-02-21 01:37:16,639 | INFO     | [payload] control thread has finished
[2025-02-20 20:37:28] 2025-02-21 01:37:16,698 | INFO     | [job] validate thread has finished
[2025-02-20 20:37:28] 2025-02-21 01:37:17,699 | INFO     | [data] copytool_out thread has finished
[2025-02-20 20:37:28] 2025-02-21 01:37:18,271 | INFO     | [data] queue_monitor thread has finished
[2025-02-20 20:37:28] 2025-02-21 01:37:18,836 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140050388948800)>', '<ExcThread(monitor, started 140049815430912)>']
[2025-02-20 20:37:28] 2025-02-21 01:37:19,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-20 20:37:28] 2025-02-21 01:37:19,311 | INFO     | [monitor] control thread has ended
[2025-02-20 20:37:28] 2025-02-21 01:37:23,861 | INFO     | all workflow threads have been joined
[2025-02-20 20:37:28] 2025-02-21 01:37:23,862 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-20 20:37:28] 2025-02-21 01:37:23,862 | INFO     | traces error code: 0
[2025-02-20 20:37:28] 2025-02-21 01:37:23,863 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-20 20:37:28] 2025-02-21 01:37:26,115 [wrapper] ==== pilot stdout END ====
[2025-02-20 20:37:28] 2025-02-21 01:37:26,191 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-20 20:37:28] 2025-02-21 01:37:26,239 [wrapper] pilotpid: 49006
[2025-02-20 20:37:28] 2025-02-21 01:37:26,288 [wrapper] Pilot exit status: 0
[2025-02-20 20:37:28] 2025-02-21 01:37:26,509 [wrapper] pandaids: 6519086685
[2025-02-20 20:37:28] 2025-02-21 01:37:26,978 [wrapper] cleanup supervisor_pilot 11465 49007
[2025-02-20 20:37:28] 2025-02-21 01:37:27,022 [wrapper] Test setup, not cleaning
[2025-02-20 20:37:28] 2025-02-21 01:37:27,176 [wrapper] apfmon messages muted
[2025-02-20 20:37:28] 2025-02-21 01:37:27,252 [wrapper] ==== wrapper stdout END ====
[2025-02-20 20:37:28] 2025-02-21 01:37:27,298 [wrapper] ==== wrapper stderr END ====
[2025-02-20 20:37:28]  *** Error codes and diagnostics ***
[2025-02-20 20:37:28]     "exeErrorCode": 0,
[2025-02-20 20:37:28]     "exeErrorDiag": "",
[2025-02-20 20:37:28]     "pilotErrorCode": 0,
[2025-02-20 20:37:28]     "pilotErrorDiag": "",
[2025-02-20 20:37:28]  *** Listing of results directory ***
[2025-02-20 20:37:28] total 718352
[2025-02-20 20:37:28] -rw-r--r-- 1 boincer umatlas    491065 Feb 19 12:12 pilot3.tar.gz
[2025-02-20 20:37:28] -rw-r--r-- 1 boincer umatlas      5118 Feb 19 12:23 queuedata.json
[2025-02-20 20:37:28] -rwx------ 1 boincer umatlas     35865 Feb 19 12:23 runpilot2-wrapper.sh
[2025-02-20 20:37:28] -rw-r--r-- 1 boincer umatlas       100 Feb 19 15:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-20 20:37:28] -rwxr-xr-x 1 boincer umatlas      7986 Feb 19 15:21 run_atlas
[2025-02-20 20:37:28] -rw-r--r-- 1 boincer umatlas       105 Feb 19 15:21 job.xml
[2025-02-20 20:37:28] -rw-r--r-- 2 boincer umatlas 344604608 Feb 19 15:21 EVNT.43092757._000806.pool.root.1
[2025-02-20 20:37:28] -rw-r--r-- 2 boincer umatlas     17569 Feb 19 15:21 start_atlas.sh
[2025-02-20 20:37:28] drwxrwx--x 2 boincer umatlas      4096 Feb 19 15:21 shared
[2025-02-20 20:37:28] -rw-r--r-- 2 boincer umatlas    503561 Feb 19 15:21 input.tar.gz
[2025-02-20 20:37:28] -rw-r--r-- 1 boincer umatlas         0 Feb 19 15:21 boinc_lockfile
[2025-02-20 20:37:28] -rw-r--r-- 1 boincer umatlas      2556 Feb 19 15:22 pandaJob.out
[2025-02-20 20:37:28] -rw------- 1 boincer umatlas       467 Feb 19 15:22 setup.sh.local
[2025-02-20 20:37:28] -rw------- 1 boincer umatlas    985842 Feb 19 15:24 agis_schedconf.cvmfs.json
[2025-02-20 20:37:28] drwx------ 4 boincer umatlas      4096 Feb 19 15:24 pilot3
[2025-02-20 20:37:28] -rw-r--r-- 1 boincer umatlas      6037 Feb 20 20:28 init_data.xml
[2025-02-20 20:37:28] -rw------- 1 boincer umatlas 328530571 Feb 20 20:29 HITS.43205075._051296.pool.root.1
[2025-02-20 20:37:28] -rw-r--r-- 1 boincer umatlas       534 Feb 20 20:29 boinc_task_state.xml
[2025-02-20 20:37:28] -rw------- 1 boincer umatlas      1069 Feb 20 20:35 memory_monitor_summary.json
[2025-02-20 20:37:28] -rw------- 1 boincer umatlas   1586690 Feb 20 20:35 agis_ddmendpoints.agis.ALL.json
[2025-02-20 20:37:28] -rw------- 1 boincer umatlas   3324382 Feb 20 20:35 log.43205075._051296.job.log.tgz.1
[2025-02-20 20:37:28] -rw------- 1 boincer umatlas        95 Feb 20 20:36 pilot_heartbeat.json
[2025-02-20 20:37:28] -rw------- 1 boincer umatlas      7794 Feb 20 20:37 heartbeat.json
[2025-02-20 20:37:28] -rw-r--r-- 1 boincer umatlas      8192 Feb 20 20:37 boinc_mmap_file
[2025-02-20 20:37:28] -rw-r--r-- 1 boincer umatlas        30 Feb 20 20:37 wrapper_checkpoint.txt
[2025-02-20 20:37:28] -rw------- 1 boincer umatlas      4524 Feb 20 20:37 pilotlog.txt
[2025-02-20 20:37:28] -rw------- 1 boincer umatlas  26001411 Feb 20 20:37 log.43205075._051296.job.log.1
[2025-02-20 20:37:28] -rw------- 1 boincer umatlas       357 Feb 20 20:37 output.list
[2025-02-20 20:37:28] -rw-r--r-- 1 boincer umatlas       620 Feb 20 20:37 runtime_log
[2025-02-20 20:37:28] -rw------- 1 boincer umatlas  29347840 Feb 20 20:37 result.tar.gz
[2025-02-20 20:37:28] -rw-r--r-- 1 boincer umatlas     11422 Feb 20 20:37 runtime_log.err
[2025-02-20 20:37:28] -rw------- 1 boincer umatlas       669 Feb 20 20:37 K1BODmOy246n9Rq4apOajLDm4fhM0noT9bVoFjIUDmYnaKDmUg2hum.diag
[2025-02-20 20:37:28] -rw-r--r-- 1 boincer umatlas     21783 Feb 20 20:37 stderr.txt
[2025-02-20 20:37:29] HITS file was successfully produced:
[2025-02-20 20:37:29] -rw------- 1 boincer umatlas 328530571 Feb 20 20:29 shared/HITS.pool.root.1
[2025-02-20 20:37:29]  *** Contents of shared directory: ***
[2025-02-20 20:37:29] total 686536
[2025-02-20 20:37:29] -rw-r--r-- 2 boincer umatlas 344604608 Feb 19 15:21 ATLAS.root_0
[2025-02-20 20:37:29] -rw-r--r-- 2 boincer umatlas     17569 Feb 19 15:21 start_atlas.sh
[2025-02-20 20:37:29] -rw-r--r-- 2 boincer umatlas    503561 Feb 19 15:21 input.tar.gz
[2025-02-20 20:37:29] -rw------- 1 boincer umatlas 328530571 Feb 20 20:29 HITS.pool.root.1
[2025-02-20 20:37:29] -rw------- 1 boincer umatlas  29347840 Feb 20 20:37 result.tar.gz
20:37:30 (41650): run_atlas exited; CPU time 192365.205863
20:37:30 (41650): called boinc_finish(0)

</stderr_txt>
]]>

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