Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:13:42 (172701): wrapper (7.7.26015): starting
16:13:42 (172701): wrapper: running run_atlas (--nthreads 4)
[2025-02-20 16:13:42] Arguments: --nthreads 4
[2025-02-20 16:13:42] Threads: 4
[2025-02-20 16:13:42] Checking for CVMFS
[2025-02-20 16:13:42] No cvmfs_config command found, will try listing directly
[2025-02-20 16:13:42] CVMFS is ok
[2025-02-20 16:13:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-20 16:13:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-20 16:13:42] Further information can be found at the LHC@home message board.
[2025-02-20 16:13:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-20 16:13:42] Checking for apptainer binary...
[2025-02-20 16:13:42] which: no apptainer in ((null))
[2025-02-20 16:13:42] apptainer is not installed, using version from CVMFS
[2025-02-20 16:13:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-20 16:13:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2025-02-20 16:13:42] apptainer works
[2025-02-20 16:13:42] Set ATHENA_PROC_NUMBER=4
[2025-02-20 16:13:42] Set ATHENA_CORE_NUMBER=4
[2025-02-20 16:13:42] Starting ATLAS job with PandaID=6518839138
[2025-02-20 16:13:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-21 00:15:23]  *** The last 200 lines of the pilot log: ***
[2025-02-21 00:15:23] 2025-02-20 23:15:08,970 | INFO     | intersect: -113510180.1721079
[2025-02-21 00:15:23] 2025-02-20 23:15:08,971 | INFO     | chi2: 0.036983351607514564
[2025-02-21 00:15:23] 2025-02-20 23:15:08,971 | INFO     | current chi2=0.036983351607514564 (change=83.92356236305486 %)
[2025-02-21 00:15:23] 2025-02-20 23:15:08,971 | INFO     | model: linear, x: [1740065676.0, 1740065737.0, 1740065798.0, 1740065859.0, 1740065920.0, 1740065981.0, 1740066042.0, 1740066103.0, 1740066164.0, 1740066225.0, 1740
[2025-02-21 00:15:23] 2025-02-20 23:15:08,972 | INFO     | sum of square deviations: 28825106042.0
[2025-02-21 00:15:23] 2025-02-20 23:15:08,978 | INFO     | sum of deviations: -4062471717.000002
[2025-02-21 00:15:23] 2025-02-20 23:15:08,978 | INFO     | mean x: 1740079462.0
[2025-02-21 00:15:23] 2025-02-20 23:15:08,978 | INFO     | mean y: 2387853.958057395
[2025-02-21 00:15:23] 2025-02-20 23:15:08,978 | INFO     | -- intersect: 247626278.73288965
[2025-02-21 00:15:23] 2025-02-20 23:15:08,978 | INFO     | intersect: 247626278.73288965
[2025-02-21 00:15:23] 2025-02-20 23:15:08,979 | INFO     | chi2: 0.022742710663594057
[2025-02-21 00:15:23] 2025-02-20 23:15:08,979 | INFO     | current chi2=0.022742710663594057 (change=38.50554458949303 %)
[2025-02-21 00:15:23] 2025-02-20 23:15:08,980 | INFO     | model: linear, x: [1740065981.0, 1740066042.0, 1740066103.0, 1740066164.0, 1740066225.0, 1740066286.0, 1740066347.0, 1740066408.0, 1740066469.0, 1740066530.0, 1740
[2025-02-21 00:15:23] 2025-02-20 23:15:08,980 | INFO     | sum of square deviations: 27881125552.0
[2025-02-21 00:15:23] 2025-02-20 23:15:08,986 | INFO     | sum of deviations: 2513290615.499997
[2025-02-21 00:15:23] 2025-02-20 23:15:08,986 | INFO     | mean x: 1740079614.5
[2025-02-21 00:15:23] 2025-02-20 23:15:08,987 | INFO     | mean y: 2386790.7790178573
[2025-02-21 00:15:23] 2025-02-20 23:15:08,987 | INFO     | -- intersect: -154469350.38318822
[2025-02-21 00:15:23] 2025-02-20 23:15:08,987 | INFO     | intersect: -154469350.38318822
[2025-02-21 00:15:23] 2025-02-20 23:15:08,988 | INFO     | chi2: 0.01469287005000398
[2025-02-21 00:15:23] 2025-02-20 23:15:08,988 | INFO     | current chi2=0.01469287005000398 (change=35.39525579277607 %)
[2025-02-21 00:15:23] 2025-02-20 23:15:08,988 | INFO     | model: linear, x: [1740066286.0, 1740066347.0, 1740066408.0, 1740066469.0, 1740066530.0, 1740066591.0, 1740066652.0, 1740066713.0, 1740066774.0, 1740066835.0, 1740
[2025-02-21 00:15:23] 2025-02-20 23:15:08,989 | INFO     | sum of square deviations: 26957982662.0
[2025-02-21 00:15:23] 2025-02-20 23:15:08,995 | INFO     | sum of deviations: 8789535445.000002
[2025-02-21 00:15:23] 2025-02-20 23:15:08,995 | INFO     | mean x: 1740079767.0
[2025-02-21 00:15:23] 2025-02-20 23:15:08,995 | INFO     | mean y: 2385756.0022573364
[2025-02-21 00:15:23] 2025-02-20 23:15:08,995 | INFO     | -- intersect: -564959841.8095914
[2025-02-21 00:15:23] 2025-02-20 23:15:08,995 | INFO     | intersect: -564959841.8095914
[2025-02-21 00:15:23] 2025-02-20 23:15:08,996 | INFO     | chi2: 0.005745528653176269
[2025-02-21 00:15:23] 2025-02-20 23:15:08,996 | INFO     | current chi2=0.005745528653176269 (change=60.89580433487388 %)
[2025-02-21 00:15:23] 2025-02-20 23:15:08,997 | INFO     | model: linear, x: [1740066591.0, 1740066652.0, 1740066713.0, 1740066774.0, 1740066835.0, 1740066896.0, 1740066957.0, 1740067018.0, 1740067079.0, 1740067140.0, 1740
[2025-02-21 00:15:23] 2025-02-20 23:15:08,997 | INFO     | sum of square deviations: 26055444809.5
[2025-02-21 00:15:23] 2025-02-20 23:15:09,003 | INFO     | sum of deviations: 11483078102.0
[2025-02-21 00:15:23] 2025-02-20 23:15:09,003 | INFO     | mean x: 1740079919.5
[2025-02-21 00:15:23] 2025-02-20 23:15:09,003 | INFO     | mean y: 2385300.7442922373
[2025-02-21 00:15:23] 2025-02-20 23:15:09,003 | INFO     | -- intersect: -764497543.3380696
[2025-02-21 00:15:23] 2025-02-20 23:15:09,004 | INFO     | intersect: -764497543.3380696
[2025-02-21 00:15:23] 2025-02-20 23:15:09,004 | INFO     | chi2: 0.003943223021823988
[2025-02-21 00:15:23] 2025-02-20 23:15:09,004 | INFO     | current chi2=0.003943223021823988 (change=31.368838972823195 %)
[2025-02-21 00:15:23] 2025-02-20 23:15:09,005 | INFO     | model: linear, x: [1740066896.0, 1740066957.0, 1740067018.0, 1740067079.0, 1740067140.0, 1740067201.0, 1740067262.0, 1740067323.0, 1740067384.0, 1740067445.0, 1740
[2025-02-21 00:15:23] 2025-02-20 23:15:09,005 | INFO     | sum of square deviations: 25173279432.0
[2025-02-21 00:15:23] 2025-02-20 23:15:09,011 | INFO     | sum of deviations: 13045217037.000011
[2025-02-21 00:15:23] 2025-02-20 23:15:09,011 | INFO     | mean x: 1740080072.0
[2025-02-21 00:15:23] 2025-02-20 23:15:09,011 | INFO     | mean y: 2385031.284064665
[2025-02-21 00:15:23] 2025-02-20 23:15:09,011 | INFO     | -- intersect: -899353745.434195
[2025-02-21 00:15:23] 2025-02-20 23:15:09,012 | INFO     | intersect: -899353745.434195
[2025-02-21 00:15:23] 2025-02-20 23:15:09,012 | INFO     | chi2: 0.003091182969065622
[2025-02-21 00:15:23] 2025-02-20 23:15:09,012 | INFO     | current chi2=0.003091182969065622 (change=21.60770638745774 %)
[2025-02-21 00:15:23] 2025-02-20 23:15:09,013 | INFO     | left removable region: 80
[2025-02-21 00:15:23] 2025-02-20 23:15:09,013 | INFO     | model: linear, x: [1740069336.0, 1740069397.0, 1740069458.0, 1740069519.0, 1740069580.0, 1740069641.0, 1740069702.0, 1740069763.0, 1740069824.0, 1740069885.0, 1740
[2025-02-21 00:15:23] 2025-02-20 23:15:09,014 | INFO     | sum of square deviations: 17972496978.0
[2025-02-21 00:15:23] 2025-02-20 23:15:09,018 | INFO     | sum of deviations: 13601759260.000008
[2025-02-21 00:15:23] 2025-02-20 23:15:09,018 | INFO     | mean x: 1740081109.0
[2025-02-21 00:15:23] 2025-02-20 23:15:09,018 | INFO     | mean y: 2384886.914728682
[2025-02-21 00:15:23] 2025-02-20 23:15:09,019 | INFO     | -- intersect: -1314525299.0468469
[2025-02-21 00:15:23] 2025-02-20 23:15:09,019 | INFO     | intersect: -1314525299.0468469
[2025-02-21 00:15:23] 2025-02-20 23:15:09,019 | INFO     | chi2: 0.0006456748439126539
[2025-02-21 00:15:23] 2025-02-20 23:15:09,020 | INFO     | -- intersect: -1314525299.0468469
[2025-02-21 00:15:23] 2025-02-20 23:15:09,020 | INFO     | current memory leak: 0.76 B/s (using 387 data points, chi2=0.00)
[2025-02-21 00:15:23] 2025-02-20 23:15:09,021 | INFO     | ..............................
[2025-02-21 00:15:23] 2025-02-20 23:15:09,021 | INFO     | . Timing measurements:
[2025-02-21 00:15:23] 2025-02-20 23:15:09,021 | INFO     | . get job = 0 s
[2025-02-21 00:15:23] 2025-02-20 23:15:09,021 | INFO     | . initial setup = 1 s
[2025-02-21 00:15:23] 2025-02-20 23:15:09,021 | INFO     | . payload setup = 5 s
[2025-02-21 00:15:23] 2025-02-20 23:15:09,021 | INFO     | . stage-in = 0 s
[2025-02-21 00:15:23] 2025-02-20 23:15:09,021 | INFO     | . payload execution = 28844 s
[2025-02-21 00:15:23] 2025-02-20 23:15:09,021 | INFO     | . stage-out = 1 s
[2025-02-21 00:15:23] 2025-02-20 23:15:09,022 | INFO     | . log creation = 0 s
[2025-02-21 00:15:23] 2025-02-20 23:15:09,022 | INFO     | ..............................
[2025-02-21 00:15:23] 2025-02-20 23:15:09,128 | INFO     | 
[2025-02-21 00:15:23] 2025-02-20 23:15:09,128 | INFO     | job summary report
[2025-02-21 00:15:23] 2025-02-20 23:15:09,128 | INFO     | --------------------------------------------------
[2025-02-21 00:15:23] 2025-02-20 23:15:09,128 | INFO     | PanDA job id: 6518839138
[2025-02-21 00:15:23] 2025-02-20 23:15:09,128 | INFO     | task id: 43205094
[2025-02-21 00:15:23] 2025-02-20 23:15:09,129 | INFO     | errors: (none)
[2025-02-21 00:15:23] 2025-02-20 23:15:09,129 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-21 00:15:23] 2025-02-20 23:15:09,129 | INFO     | pilot state: finished 
[2025-02-21 00:15:23] 2025-02-20 23:15:09,129 | INFO     | transexitcode: 0
[2025-02-21 00:15:23] 2025-02-20 23:15:09,129 | INFO     | exeerrorcode: 0
[2025-02-21 00:15:23] 2025-02-20 23:15:09,129 | INFO     | exeerrordiag: 
[2025-02-21 00:15:23] 2025-02-20 23:15:09,129 | INFO     | exitcode: 0
[2025-02-21 00:15:23] 2025-02-20 23:15:09,130 | INFO     | exitmsg: OK
[2025-02-21 00:15:23] 2025-02-20 23:15:09,130 | INFO     | cpuconsumptiontime: 110205 s
[2025-02-21 00:15:23] 2025-02-20 23:15:09,130 | INFO     | nevents: 400
[2025-02-21 00:15:23] 2025-02-20 23:15:09,130 | INFO     | neventsw: 0
[2025-02-21 00:15:23] 2025-02-20 23:15:09,130 | INFO     | pid: 183218
[2025-02-21 00:15:23] 2025-02-20 23:15:09,130 | INFO     | pgrp: 183218
[2025-02-21 00:15:23] 2025-02-20 23:15:09,130 | INFO     | corecount: 4
[2025-02-21 00:15:23] 2025-02-20 23:15:09,130 | INFO     | event service: False
[2025-02-21 00:15:23] 2025-02-20 23:15:09,131 | INFO     | sizes: {0: 2389157, 1: 2389356, 4: 2389562, 12: 2389590, 28853: 2426877, 28855: 2435840, 28856: 2436024, 28863: 2436194}
[2025-02-21 00:15:23] 2025-02-20 23:15:09,131 | INFO     | --------------------------------------------------
[2025-02-21 00:15:23] 2025-02-20 23:15:09,131 | INFO     | 
[2025-02-21 00:15:23] 2025-02-20 23:15:09,131 | INFO     | executing command: ls -lF /scratch/boinc/var/slot16/slots/0
[2025-02-21 00:15:23] 2025-02-20 23:15:09,150 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-21 00:15:23] 2025-02-20 23:15:09,150 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-21 00:15:23] 2025-02-20 23:15:09,150 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-21 00:15:23] 2025-02-20 23:15:09,150 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-21 00:15:23] 2025-02-20 23:15:09,151 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-21 00:15:23] 2025-02-20 23:15:09,151 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-21 00:15:23] 2025-02-20 23:15:09,151 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-21 00:15:23] 2025-02-20 23:15:09,151 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-21 00:15:23] 2025-02-20 23:15:09,151 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-21 00:15:23] 2025-02-20 23:15:09,151 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-21 00:15:23] 2025-02-20 23:15:09,151 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-21 00:15:23] 2025-02-20 23:15:09,152 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-21 00:15:23] 2025-02-20 23:15:09,152 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-21 00:15:23] 2025-02-20 23:15:09,152 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-21 00:15:23] 2025-02-20 23:15:09,152 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-21 00:15:23] 2025-02-20 23:15:09,152 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-21 00:15:23] 2025-02-20 23:15:09,152 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-21 00:15:23] 2025-02-20 23:15:09,152 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-21 00:15:23] 2025-02-20 23:15:09,153 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-21 00:15:23] 2025-02-20 23:15:09,153 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-21 00:15:23] 2025-02-20 23:15:09,153 | INFO     | job 6518839138 has completed (purged errors)
[2025-02-21 00:15:23] 2025-02-20 23:15:09,153 | INFO     | overall cleanup function is called
[2025-02-21 00:15:23] 2025-02-20 23:15:10,161 | INFO     | --- collectZombieJob: --- 10, [183218]
[2025-02-21 00:15:23] 2025-02-20 23:15:10,161 | INFO     | zombie collector waiting for pid 183218
[2025-02-21 00:15:23] 2025-02-20 23:15:10,162 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-21 00:15:23] 2025-02-20 23:15:10,162 | INFO     | collected zombie processes
[2025-02-21 00:15:23] 2025-02-20 23:15:10,162 | INFO     | will attempt to kill all subprocesses of pid=183218
[2025-02-21 00:15:23] 2025-02-20 23:15:10,272 | INFO     | process IDs to be killed: [183218] (in reverse order)
[2025-02-21 00:15:23] 2025-02-20 23:15:10,358 | WARNING  | found no corresponding commands to process id(s)
[2025-02-21 00:15:23] 2025-02-20 23:15:10,359 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-21 00:15:23] 2025-02-20 23:15:10,366 | INFO     | did not find any defunct processes belonging to 183218
[2025-02-21 00:15:23] 2025-02-20 23:15:10,373 | INFO     | did not find any defunct processes belonging to 183218
[2025-02-21 00:15:23] 2025-02-20 23:15:10,373 | INFO     | ready for new job
[2025-02-21 00:15:23] 2025-02-20 23:15:10,373 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-21 00:15:23] 2025-02-20 23:15:10,376 | INFO     | **************************************
[2025-02-21 00:15:23] 2025-02-20 23:15:10,376 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-21 00:15:23] 2025-02-20 23:15:10,376 | INFO     | **************************************
[2025-02-21 00:15:23] 2025-02-20 23:15:10,376 | INFO     | 
[2025-02-21 00:15:23] 2025-02-20 23:15:10,379 | INFO     | architecture information:
[2025-02-21 00:15:23] 2025-02-20 23:15:10,379 | INFO     | executing command: cat /etc/os-release
[2025-02-21 00:15:23] 2025-02-20 23:15:10,391 | INFO     | cat /etc/os-release:
[2025-02-21 00:15:23] NAME="CentOS Linux"
[2025-02-21 00:15:23] VERSION="7 (Core)"
[2025-02-21 00:15:23] ID="centos"
[2025-02-21 00:15:23] ID_LIKE="rhel fedora"
[2025-02-21 00:15:23] VERSION_ID="7"
[2025-02-21 00:15:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-21 00:15:23] ANSI_COLOR="0;31"
[2025-02-21 00:15:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-21 00:15:23] HOME_URL="https://www.centos.org/"
[2025-02-21 00:15:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-21 00:15:23] 
[2025-02-21 00:15:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-21 00:15:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-21 00:15:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-21 00:15:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-21 00:15:23] 
[2025-02-21 00:15:23] 2025-02-20 23:15:10,392 | INFO     | **************************************
[2025-02-21 00:15:23] 2025-02-20 23:15:10,894 | INFO     | executing command: df -mP /scratch/boinc/var/slot16/slots/0
[2025-02-21 00:15:23] 2025-02-20 23:15:10,908 | INFO     | sufficient remaining disk space (1660443164672 B)
[2025-02-21 00:15:23] 2025-02-20 23:15:10,908 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-21 00:15:23] 2025-02-20 23:15:10,909 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-21 00:15:23] 2025-02-20 23:15:10,909 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-21 00:15:23] 2025-02-20 23:15:10,909 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-21 00:15:23] 2025-02-20 23:15:10,910 | INFO     | found 0 job(s) in 20 queues
[2025-02-21 00:15:23] 2025-02-20 23:15:10,910 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-21 00:15:23] 2025-02-20 23:15:10,910 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-21 00:15:23] 2025-02-20 23:15:10,909 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-21 00:15:23] 2025-02-20 23:15:10,910 | INFO     | aborting loop
[2025-02-21 00:15:23] 2025-02-20 23:15:10,959 | INFO     | all payload control threads have been joined
[2025-02-21 00:15:23] 2025-02-20 23:15:11,334 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-21 00:15:23] 2025-02-20 23:15:11,367 | INFO     | all job control threads have been joined
[2025-02-21 00:15:23] 2025-02-20 23:15:11,562 | INFO     | all data control threads have been joined
[2025-02-21 00:15:23] 2025-02-20 23:15:11,911 | INFO     | [job] retrieve thread has finished
[2025-02-21 00:15:23] 2025-02-20 23:15:11,915 | INFO     | [job] queue monitor thread has finished
[2025-02-21 00:15:23] 2025-02-20 23:15:11,916 | INFO     | [job] job monitor thread has finished
[2025-02-21 00:15:23] 2025-02-20 23:15:11,964 | INFO     | [payload] control thread has finished
[2025-02-21 00:15:23] 2025-02-20 23:15:12,046 | INFO     | [payload] failed_post thread has finished
[2025-02-21 00:15:23] 2025-02-20 23:15:12,200 | INFO     | [payload] execute_payloads thread has finished
[2025-02-21 00:15:23] 2025-02-20 23:15:12,243 | INFO     | [data] copytool_in thread has finished
[2025-02-21 00:15:23] 2025-02-20 23:15:12,372 | INFO     | [job] control thread has finished
[2025-02-21 00:15:23] 2025-02-20 23:15:12,568 | INFO     | [data] control thread has finished
[2025-02-21 00:15:23] 2025-02-20 23:15:12,769 | INFO     | [job] validate thread has finished
[2025-02-21 00:15:23] 2025-02-20 23:15:12,853 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-21 00:15:23] 2025-02-20 23:15:13,042 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-21 00:15:23] 2025-02-20 23:15:13,119 | INFO     | [payload] validate_post thread has finished
[2025-02-21 00:15:23] 2025-02-20 23:15:13,209 | INFO     | [job] create_data_payload thread has finished
[2025-02-21 00:15:23] 2025-02-20 23:15:13,323 | INFO     | [payload] validate_pre thread has finished
[2025-02-21 00:15:23] 2025-02-20 23:15:13,339 | INFO     | [data] copytool_out thread has finished
[2025-02-21 00:15:23] 2025-02-20 23:15:16,858 | INFO     | [data] queue_monitor thread has finished
[2025-02-21 00:15:23] 2025-02-20 23:15:17,880 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23019719825216)>', '<ExcThread(monitor, started 23019485361920)>']
[2025-02-21 00:15:23] 2025-02-20 23:15:17,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-21 00:15:23] 2025-02-20 23:15:17,939 | INFO     | [monitor] control thread has ended
[2025-02-21 00:15:23] 2025-02-20 23:15:22,906 | INFO     | all workflow threads have been joined
[2025-02-21 00:15:23] 2025-02-20 23:15:22,906 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-21 00:15:23] 2025-02-20 23:15:22,906 | INFO     | traces error code: 0
[2025-02-21 00:15:23] 2025-02-20 23:15:22,907 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-21 00:15:23] 2025-02-20 23:15:23,020 [wrapper] ==== pilot stdout END ====
[2025-02-21 00:15:23] 2025-02-20 23:15:23,023 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-21 00:15:23] 2025-02-20 23:15:23,026 [wrapper] pilotpid: 176311
[2025-02-21 00:15:23] 2025-02-20 23:15:23,028 [wrapper] Pilot exit status: 0
[2025-02-21 00:15:23] 2025-02-20 23:15:23,038 [wrapper] pandaids: 6518839138
[2025-02-21 00:15:23] 2025-02-20 23:15:23,082 [wrapper] cleanup supervisor_pilot  947686 176312
[2025-02-21 00:15:23] 2025-02-20 23:15:23,085 [wrapper] Test setup, not cleaning
[2025-02-21 00:15:23] 2025-02-20 23:15:23,089 [wrapper] apfmon messages muted
[2025-02-21 00:15:23] 2025-02-20 23:15:23,092 [wrapper] ==== wrapper stdout END ====
[2025-02-21 00:15:23] 2025-02-20 23:15:23,094 [wrapper] ==== wrapper stderr END ====
[2025-02-21 00:15:23]  *** Error codes and diagnostics ***
[2025-02-21 00:15:23]     "exeErrorCode": 0,
[2025-02-21 00:15:23]     "exeErrorDiag": "",
[2025-02-21 00:15:23]     "pilotErrorCode": 0,
[2025-02-21 00:15:23]     "pilotErrorDiag": "",
[2025-02-21 00:15:23]  *** Listing of results directory ***
[2025-02-21 00:15:23] total 667956
[2025-02-21 00:15:23] -rw-r--r-- 1 boinc boinc    491065 Feb 19 15:57 pilot3.tar.gz
[2025-02-21 00:15:23] -rw-r--r-- 1 boinc boinc      5118 Feb 19 16:36 queuedata.json
[2025-02-21 00:15:23] -rwx------ 1 boinc boinc     35865 Feb 19 16:36 runpilot2-wrapper.sh
[2025-02-21 00:15:23] -rw-r--r-- 1 boinc boinc       100 Feb 20 16:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-21 00:15:23] -rwxr-xr-x 1 boinc boinc      7986 Feb 20 16:13 run_atlas
[2025-02-21 00:15:23] -rw-r--r-- 1 boinc boinc       105 Feb 20 16:13 job.xml
[2025-02-21 00:15:23] -rw-r--r-- 1 boinc boinc      6423 Feb 20 16:13 init_data.xml
[2025-02-21 00:15:23] -rw-r--r-- 2 boinc boinc 342377507 Feb 20 16:13 EVNT.43092757._001618.pool.root.1
[2025-02-21 00:15:23] -rw-r--r-- 2 boinc boinc     17569 Feb 20 16:13 start_atlas.sh
[2025-02-21 00:15:23] drwxrwx--x 2 boinc boinc      4096 Feb 20 16:13 shared
[2025-02-21 00:15:23] -rw-r--r-- 2 boinc boinc    503555 Feb 20 16:13 input.tar.gz
[2025-02-21 00:15:23] -rw-r--r-- 1 boinc boinc         0 Feb 20 16:13 boinc_lockfile
[2025-02-21 00:15:23] -rw-r--r-- 1 boinc boinc      2548 Feb 20 16:13 pandaJob.out
[2025-02-21 00:15:23] -rw------- 1 boinc boinc       424 Feb 20 16:13 setup.sh.local
[2025-02-21 00:15:23] -rw------- 1 boinc boinc    987485 Feb 20 16:13 agis_schedconf.cvmfs.json
[2025-02-21 00:15:23] drwx------ 4 boinc boinc      4096 Feb 20 16:13 pilot3
[2025-02-21 00:15:23] -rw------- 1 boinc boinc 329374555 Feb 21 00:14 HITS.43205094._021055.pool.root.1
[2025-02-21 00:15:23] -rw-r--r-- 1 boinc boinc       533 Feb 21 00:14 boinc_task_state.xml
[2025-02-21 00:15:23] -rw------- 1 boinc boinc        95 Feb 21 00:14 pilot_heartbeat.json
[2025-02-21 00:15:23] -rw------- 1 boinc boinc      1036 Feb 21 00:14 memory_monitor_summary.json
[2025-02-21 00:15:23] -rw------- 1 boinc boinc   1586690 Feb 21 00:14 agis_ddmendpoints.agis.ALL.json
[2025-02-21 00:15:23] -rw-r--r-- 1 boinc boinc      8192 Feb 21 00:15 boinc_mmap_file
[2025-02-21 00:15:23] -rw-r--r-- 1 boinc boinc        29 Feb 21 00:15 wrapper_checkpoint.txt
[2025-02-21 00:15:23] -rw------- 1 boinc boinc    517413 Feb 21 00:15 log.43205094._021055.job.log.tgz.1
[2025-02-21 00:15:23] -rw------- 1 boinc boinc      7746 Feb 21 00:15 heartbeat.json
[2025-02-21 00:15:23] -rw------- 1 boinc boinc      4349 Feb 21 00:15 pilotlog.txt
[2025-02-21 00:15:23] -rw------- 1 boinc boinc   3691433 Feb 21 00:15 log.43205094._021055.job.log.1
[2025-02-21 00:15:23] -rw------- 1 boinc boinc       357 Feb 21 00:15 output.list
[2025-02-21 00:15:23] -rw-r--r-- 1 boinc boinc       620 Feb 21 00:15 runtime_log
[2025-02-21 00:15:23] -rw------- 1 boinc boinc   4229120 Feb 21 00:15 result.tar.gz
[2025-02-21 00:15:23] -rw-r--r-- 1 boinc boinc     11424 Feb 21 00:15 runtime_log.err
[2025-02-21 00:15:23] -rw------- 1 boinc boinc       667 Feb 21 00:15 JCvMDmwI146n9Rq4apOajLDm4fhM0noT9bVoFjIUDm0faKDmsw3PDn.diag
[2025-02-21 00:15:23] -rw-r--r-- 1 boinc boinc     21401 Feb 21 00:15 stderr.txt
[2025-02-21 00:15:23] HITS file was successfully produced:
[2025-02-21 00:15:23] -rw------- 1 boinc boinc 329374555 Feb 21 00:14 shared/HITS.pool.root.1
[2025-02-21 00:15:23]  *** Contents of shared directory: ***
[2025-02-21 00:15:23] total 660664
[2025-02-21 00:15:23] -rw-r--r-- 2 boinc boinc 342377507 Feb 20 16:13 ATLAS.root_0
[2025-02-21 00:15:23] -rw-r--r-- 2 boinc boinc     17569 Feb 20 16:13 start_atlas.sh
[2025-02-21 00:15:23] -rw-r--r-- 2 boinc boinc    503555 Feb 20 16:13 input.tar.gz
[2025-02-21 00:15:23] -rw------- 1 boinc boinc 329374555 Feb 21 00:14 HITS.pool.root.1
[2025-02-21 00:15:23] -rw------- 1 boinc boinc   4229120 Feb 21 00:15 result.tar.gz
00:15:25 (172701): run_atlas exited; CPU time 110332.594601
00:15:25 (172701): called boinc_finish(0)

</stderr_txt>
]]>

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