Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:40:52 (3485463): wrapper (7.7.26015): starting
01:40:52 (3485463): wrapper: running run_atlas (--nthreads 4)
[2025-02-20 01:40:52] Arguments: --nthreads 4
[2025-02-20 01:40:52] Threads: 4
[2025-02-20 01:40:52] Checking for CVMFS
[2025-02-20 01:40:52] No cvmfs_config command found, will try listing directly
[2025-02-20 01:40:52] CVMFS is ok
[2025-02-20 01:40:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-20 01:40:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-20 01:40:52] Further information can be found at the LHC@home message board.
[2025-02-20 01:40:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-20 01:40:52] Checking for apptainer binary...
[2025-02-20 01:40:52] which: no apptainer in ((null))
[2025-02-20 01:40:52] apptainer is not installed, using version from CVMFS
[2025-02-20 01:40:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-20 01:40:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment ugluk10.grid.cesnet.cz
[2025-02-20 01:40:52] apptainer works
[2025-02-20 01:40:52] Set ATHENA_PROC_NUMBER=4
[2025-02-20 01:40:52] Set ATHENA_CORE_NUMBER=4
[2025-02-20 01:40:52] Starting ATLAS job with PandaID=6518835949
[2025-02-20 01:40:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-20 09:05:42]  *** The last 200 lines of the pilot log: ***
[2025-02-20 09:05:42] 2025-02-20 08:05:27,378 | INFO     | -- intersect: -11680862446.322521
[2025-02-20 09:05:42] 2025-02-20 08:05:27,378 | INFO     | intersect: -11680862446.322521
[2025-02-20 09:05:42] 2025-02-20 08:05:27,379 | INFO     | chi2: 4.393626175518995
[2025-02-20 09:05:42] 2025-02-20 08:05:27,380 | INFO     | model: linear, x: [1740012084.0, 1740012145.0, 1740012206.0, 1740012267.0, 1740012328.0, 1740012389.0, 1740012450.0, 1740012511.0, 1740012572.0, 1740012633.0, 1740
[2025-02-20 09:05:42] 2025-02-20 08:05:27,380 | INFO     | sum of square deviations: 24999270588.0
[2025-02-20 09:05:42] 2025-02-20 08:05:27,386 | INFO     | sum of deviations: 197360940372.0
[2025-02-20 09:05:42] 2025-02-20 08:05:27,386 | INFO     | mean x: 1740025229.5
[2025-02-20 09:05:42] 2025-02-20 08:05:27,386 | INFO     | mean y: 2355222.162037037
[2025-02-20 09:05:42] 2025-02-20 08:05:27,386 | INFO     | -- intersect: -13734566195.45597
[2025-02-20 09:05:42] 2025-02-20 08:05:27,386 | INFO     | intersect: -13734566195.45597
[2025-02-20 09:05:42] 2025-02-20 08:05:27,387 | INFO     | chi2: 3.7329781520771683
[2025-02-20 09:05:42] 2025-02-20 08:05:27,387 | INFO     | current chi2=3.7329781520771683 (change=15.036509640326607 %)
[2025-02-20 09:05:42] 2025-02-20 08:05:27,387 | INFO     | right removable region: 431
[2025-02-20 09:05:42] 2025-02-20 08:05:27,388 | INFO     | model: linear, x: [1740012389.0, 1740012450.0, 1740012511.0, 1740012572.0, 1740012633.0, 1740012694.0, 1740012755.0, 1740012816.0, 1740012877.0, 1740012938.0, 1740
[2025-02-20 09:05:42] 2025-02-20 08:05:27,388 | INFO     | sum of square deviations: 24999270588.0
[2025-02-20 09:05:42] 2025-02-20 08:05:27,394 | INFO     | sum of deviations: 73556219564.99997
[2025-02-20 09:05:42] 2025-02-20 08:05:27,394 | INFO     | mean x: 1740025534.5
[2025-02-20 09:05:42] 2025-02-20 08:05:27,394 | INFO     | mean y: 2368535.763888889
[2025-02-20 09:05:42] 2025-02-20 08:05:27,394 | INFO     | -- intersect: -5117368850.72711
[2025-02-20 09:05:42] 2025-02-20 08:05:27,394 | INFO     | intersect: -5117368850.72711
[2025-02-20 09:05:42] 2025-02-20 08:05:27,395 | INFO     | chi2: 2.1086434094461874
[2025-02-20 09:05:42] 2025-02-20 08:05:27,395 | INFO     | current chi2=2.1086434094461874 (change=52.00676331556349 %)
[2025-02-20 09:05:42] 2025-02-20 08:05:27,396 | INFO     | model: linear, x: [1740012694.0, 1740012755.0, 1740012816.0, 1740012877.0, 1740012938.0, 1740012999.0, 1740013060.0, 1740013121.0, 1740013182.0, 1740013243.0, 1740
[2025-02-20 09:05:42] 2025-02-20 08:05:27,396 | INFO     | sum of square deviations: 24141245198.0
[2025-02-20 09:05:42] 2025-02-20 08:05:27,401 | INFO     | sum of deviations: -5956975069.0
[2025-02-20 09:05:42] 2025-02-20 08:05:27,402 | INFO     | mean x: 1740025687.0
[2025-02-20 09:05:42] 2025-02-20 08:05:27,402 | INFO     | mean y: 2382669.550351288
[2025-02-20 09:05:42] 2025-02-20 08:05:27,402 | INFO     | -- intersect: 431742860.04033136
[2025-02-20 09:05:42] 2025-02-20 08:05:27,402 | INFO     | intersect: 431742860.04033136
[2025-02-20 09:05:42] 2025-02-20 08:05:27,403 | INFO     | chi2: 0.8020684442139645
[2025-02-20 09:05:42] 2025-02-20 08:05:27,403 | INFO     | current chi2=0.8020684442139645 (change=61.96282213384675 %)
[2025-02-20 09:05:42] 2025-02-20 08:05:27,403 | INFO     | model: linear, x: [1740012999.0, 1740013060.0, 1740013121.0, 1740013182.0, 1740013243.0, 1740013304.0, 1740013365.0, 1740013426.0, 1740013487.0, 1740013548.0, 1740
[2025-02-20 09:05:42] 2025-02-20 08:05:27,404 | INFO     | sum of square deviations: 23303080645.5
[2025-02-20 09:05:42] 2025-02-20 08:05:27,409 | INFO     | sum of deviations: -21936151287.5
[2025-02-20 09:05:42] 2025-02-20 08:05:27,409 | INFO     | mean x: 1740025839.5
[2025-02-20 09:05:42] 2025-02-20 08:05:27,409 | INFO     | mean y: 2385564.6184834125
[2025-02-20 09:05:42] 2025-02-20 08:05:27,409 | INFO     | -- intersect: 1640343680.1177747
[2025-02-20 09:05:42] 2025-02-20 08:05:27,410 | INFO     | intersect: 1640343680.1177747
[2025-02-20 09:05:42] 2025-02-20 08:05:27,410 | INFO     | chi2: 0.7216145210480267
[2025-02-20 09:05:42] 2025-02-20 08:05:27,410 | INFO     | current chi2=0.7216145210480267 (change=10.030805194534675 %)
[2025-02-20 09:05:42] 2025-02-20 08:05:27,410 | INFO     | left removable region: 30
[2025-02-20 09:05:42] 2025-02-20 08:05:27,411 | INFO     | model: linear, x: [1740013914.0, 1740013975.0, 1740014036.0, 1740014097.0, 1740014158.0, 1740014219.0, 1740014280.0, 1740014341.0, 1740014402.0, 1740014463.0, 1740
[2025-02-20 09:05:42] 2025-02-20 08:05:27,411 | INFO     | sum of square deviations: 19994421400.0
[2025-02-20 09:05:42] 2025-02-20 08:05:27,416 | INFO     | sum of deviations: 9891662766.000002
[2025-02-20 09:05:42] 2025-02-20 08:05:27,416 | INFO     | mean x: 1740026114.0
[2025-02-20 09:05:42] 2025-02-20 08:05:27,416 | INFO     | mean y: 2388794.6408977555
[2025-02-20 09:05:42] 2025-02-20 08:05:27,416 | INFO     | -- intersect: -858438892.2118698
[2025-02-20 09:05:42] 2025-02-20 08:05:27,417 | INFO     | intersect: -858438892.2118698
[2025-02-20 09:05:42] 2025-02-20 08:05:27,417 | INFO     | chi2: 0.03146478622806111
[2025-02-20 09:05:42] 2025-02-20 08:05:27,417 | INFO     | -- intersect: -858438892.2118698
[2025-02-20 09:05:42] 2025-02-20 08:05:27,418 | INFO     | current memory leak: 0.49 B/s (using 401 data points, chi2=0.03)
[2025-02-20 09:05:42] 2025-02-20 08:05:27,418 | INFO     | ..............................
[2025-02-20 09:05:42] 2025-02-20 08:05:27,419 | INFO     | . Timing measurements:
[2025-02-20 09:05:42] 2025-02-20 08:05:27,419 | INFO     | . get job = 0 s
[2025-02-20 09:05:42] 2025-02-20 08:05:27,419 | INFO     | . initial setup = 1 s
[2025-02-20 09:05:42] 2025-02-20 08:05:27,419 | INFO     | . payload setup = 4 s
[2025-02-20 09:05:42] 2025-02-20 08:05:27,419 | INFO     | . stage-in = 0 s
[2025-02-20 09:05:42] 2025-02-20 08:05:27,419 | INFO     | . payload execution = 26634 s
[2025-02-20 09:05:42] 2025-02-20 08:05:27,419 | INFO     | . stage-out = 1 s
[2025-02-20 09:05:42] 2025-02-20 08:05:27,419 | INFO     | . log creation = 0 s
[2025-02-20 09:05:42] 2025-02-20 08:05:27,420 | INFO     | ..............................
[2025-02-20 09:05:42] 2025-02-20 08:05:27,463 | WARNING  | process 3498179 can no longer be monitored (due to stat problems) - aborting
[2025-02-20 09:05:42] 2025-02-20 08:05:27,478 | INFO     | using path: /scratch/boinc/var/slot8/slots/0/PanDA_Pilot-6518835949/memory_monitor_summary.json (trf name=prmon)
[2025-02-20 09:05:42] 2025-02-20 08:05:27,612 | INFO     | number of running child processes to parent process 3498179: 1
[2025-02-20 09:05:42] 2025-02-20 08:05:27,612 | INFO     | maximum number of monitored processes: 6
[2025-02-20 09:05:42] 2025-02-20 08:05:27,613 | INFO     | aborting job monitoring since job object (job id=6518835949) has expired
[2025-02-20 09:05:42] 2025-02-20 08:05:28,007 | INFO     | 
[2025-02-20 09:05:42] 2025-02-20 08:05:28,007 | INFO     | job summary report
[2025-02-20 09:05:42] 2025-02-20 08:05:28,007 | INFO     | --------------------------------------------------
[2025-02-20 09:05:42] 2025-02-20 08:05:28,007 | INFO     | PanDA job id: 6518835949
[2025-02-20 09:05:42] 2025-02-20 08:05:28,007 | INFO     | task id: 43205075
[2025-02-20 09:05:42] 2025-02-20 08:05:28,008 | INFO     | errors: (none)
[2025-02-20 09:05:42] 2025-02-20 08:05:28,008 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-20 09:05:42] 2025-02-20 08:05:28,008 | INFO     | pilot state: finished 
[2025-02-20 09:05:42] 2025-02-20 08:05:28,008 | INFO     | transexitcode: 0
[2025-02-20 09:05:42] 2025-02-20 08:05:28,008 | INFO     | exeerrorcode: 0
[2025-02-20 09:05:42] 2025-02-20 08:05:28,008 | INFO     | exeerrordiag: 
[2025-02-20 09:05:42] 2025-02-20 08:05:28,008 | INFO     | exitcode: 0
[2025-02-20 09:05:42] 2025-02-20 08:05:28,008 | INFO     | exitmsg: OK
[2025-02-20 09:05:42] 2025-02-20 08:05:28,008 | INFO     | cpuconsumptiontime: 102250 s
[2025-02-20 09:05:42] 2025-02-20 08:05:28,009 | INFO     | nevents: 400
[2025-02-20 09:05:42] 2025-02-20 08:05:28,009 | INFO     | neventsw: 0
[2025-02-20 09:05:42] 2025-02-20 08:05:28,009 | INFO     | pid: 3498179
[2025-02-20 09:05:42] 2025-02-20 08:05:28,009 | INFO     | pgrp: 3498179
[2025-02-20 09:05:42] 2025-02-20 08:05:28,009 | INFO     | corecount: 4
[2025-02-20 09:05:42] 2025-02-20 08:05:28,009 | INFO     | event service: False
[2025-02-20 09:05:42] 2025-02-20 08:05:28,009 | INFO     | sizes: {0: 2389274, 1: 2389416, 4: 2389622, 11: 2389650, 26642: 2425826, 26644: 2434787, 26646: 2434971, 26652: 2435141}
[2025-02-20 09:05:42] 2025-02-20 08:05:28,009 | INFO     | --------------------------------------------------
[2025-02-20 09:05:42] 2025-02-20 08:05:28,009 | INFO     | 
[2025-02-20 09:05:42] 2025-02-20 08:05:28,010 | INFO     | executing command: ls -lF /scratch/boinc/var/slot8/slots/0
[2025-02-20 09:05:42] 2025-02-20 08:05:28,027 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-20 09:05:42] 2025-02-20 08:05:28,027 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-20 09:05:42] 2025-02-20 08:05:28,027 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-20 09:05:42] 2025-02-20 08:05:28,027 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-20 09:05:42] 2025-02-20 08:05:28,028 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-20 09:05:42] 2025-02-20 08:05:28,028 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-20 09:05:42] 2025-02-20 08:05:28,028 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-20 09:05:42] 2025-02-20 08:05:28,028 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-20 09:05:42] 2025-02-20 08:05:28,028 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-20 09:05:42] 2025-02-20 08:05:28,028 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-20 09:05:42] 2025-02-20 08:05:28,028 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-20 09:05:42] 2025-02-20 08:05:28,029 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-20 09:05:42] 2025-02-20 08:05:28,029 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-20 09:05:42] 2025-02-20 08:05:28,029 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-20 09:05:42] 2025-02-20 08:05:28,029 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-20 09:05:42] 2025-02-20 08:05:28,029 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-20 09:05:42] 2025-02-20 08:05:28,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-20 09:05:42] 2025-02-20 08:05:28,029 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-20 09:05:42] 2025-02-20 08:05:28,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-20 09:05:42] 2025-02-20 08:05:28,030 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-20 09:05:42] 2025-02-20 08:05:28,030 | INFO     | job 6518835949 has completed (purged errors)
[2025-02-20 09:05:42] 2025-02-20 08:05:28,030 | INFO     | overall cleanup function is called
[2025-02-20 09:05:42] 2025-02-20 08:05:28,517 | INFO     | PID=3490991 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-20 09:05:42] 2025-02-20 08:05:28,517 | INFO     | .. there are 6 such processes running
[2025-02-20 09:05:42] 2025-02-20 08:05:29,038 | INFO     | --- collectZombieJob: --- 10, [3498179]
[2025-02-20 09:05:42] 2025-02-20 08:05:29,038 | INFO     | zombie collector waiting for pid 3498179
[2025-02-20 09:05:42] 2025-02-20 08:05:29,038 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-20 09:05:42] 2025-02-20 08:05:29,038 | INFO     | collected zombie processes
[2025-02-20 09:05:42] 2025-02-20 08:05:29,039 | INFO     | will attempt to kill all subprocesses of pid=3498179
[2025-02-20 09:05:42] 2025-02-20 08:05:29,120 | INFO     | process IDs to be killed: [3498179] (in reverse order)
[2025-02-20 09:05:42] 2025-02-20 08:05:29,185 | WARNING  | found no corresponding commands to process id(s)
[2025-02-20 09:05:42] 2025-02-20 08:05:29,186 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-20 09:05:42] 2025-02-20 08:05:29,192 | INFO     | did not find any defunct processes belonging to 3498179
[2025-02-20 09:05:42] 2025-02-20 08:05:29,198 | INFO     | did not find any defunct processes belonging to 3498179
[2025-02-20 09:05:42] 2025-02-20 08:05:29,198 | INFO     | ready for new job
[2025-02-20 09:05:42] 2025-02-20 08:05:29,198 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-20 09:05:42] 2025-02-20 08:05:29,201 | INFO     | **************************************
[2025-02-20 09:05:42] 2025-02-20 08:05:29,201 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-20 09:05:42] 2025-02-20 08:05:29,201 | INFO     | **************************************
[2025-02-20 09:05:42] 2025-02-20 08:05:29,201 | INFO     | 
[2025-02-20 09:05:42] 2025-02-20 08:05:29,203 | INFO     | architecture information:
[2025-02-20 09:05:42] 2025-02-20 08:05:29,203 | INFO     | executing command: cat /etc/os-release
[2025-02-20 09:05:42] 2025-02-20 08:05:29,216 | INFO     | cat /etc/os-release:
[2025-02-20 09:05:42] NAME="CentOS Linux"
[2025-02-20 09:05:42] VERSION="7 (Core)"
[2025-02-20 09:05:42] ID="centos"
[2025-02-20 09:05:42] ID_LIKE="rhel fedora"
[2025-02-20 09:05:42] VERSION_ID="7"
[2025-02-20 09:05:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-20 09:05:42] ANSI_COLOR="0;31"
[2025-02-20 09:05:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-20 09:05:42] HOME_URL="https://www.centos.org/"
[2025-02-20 09:05:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-20 09:05:42] 
[2025-02-20 09:05:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-20 09:05:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-20 09:05:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-20 09:05:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-20 09:05:42] 
[2025-02-20 09:05:42] 2025-02-20 08:05:29,216 | INFO     | **************************************
[2025-02-20 09:05:42] 2025-02-20 08:05:29,719 | INFO     | executing command: df -mP /scratch/boinc/var/slot8/slots/0
[2025-02-20 09:05:42] 2025-02-20 08:05:29,731 | INFO     | sufficient remaining disk space (3474631688192 B)
[2025-02-20 09:05:42] 2025-02-20 08:05:29,732 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-20 09:05:42] 2025-02-20 08:05:29,732 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-20 09:05:42] 2025-02-20 08:05:29,798 | INFO     | all payload control threads have been joined
[2025-02-20 09:05:42] 2025-02-20 08:05:29,982 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-20 09:05:42] 2025-02-20 08:05:30,105 | INFO     | all job control threads have been joined
[2025-02-20 09:05:42] 2025-02-20 08:05:30,116 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-20 09:05:42] 2025-02-20 08:05:30,116 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-20 09:05:42] 2025-02-20 08:05:30,116 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-20 09:05:42] 2025-02-20 08:05:30,116 | INFO     | will abort loop
[2025-02-20 09:05:42] 2025-02-20 08:05:30,521 | INFO     | found 0 job(s) in 20 queues
[2025-02-20 09:05:42] 2025-02-20 08:05:30,521 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-20 09:05:42] 2025-02-20 08:05:30,522 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-20 09:05:42] 2025-02-20 08:05:30,733 | INFO     | [job] retrieve thread has finished
[2025-02-20 09:05:42] 2025-02-20 08:05:30,775 | INFO     | [job] create_data_payload thread has finished
[2025-02-20 09:05:42] 2025-02-20 08:05:30,793 | INFO     | all data control threads have been joined
[2025-02-20 09:05:42] 2025-02-20 08:05:30,804 | INFO     | [payload] control thread has finished
[2025-02-20 09:05:42] 2025-02-20 08:05:31,111 | INFO     | [job] control thread has finished
[2025-02-20 09:05:42] 2025-02-20 08:05:31,122 | INFO     | [job] job monitor thread has finished
[2025-02-20 09:05:42] 2025-02-20 08:05:31,231 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-20 09:05:42] 2025-02-20 08:05:31,303 | INFO     | [payload] failed_post thread has finished
[2025-02-20 09:05:42] 2025-02-20 08:05:31,391 | INFO     | [data] copytool_in thread has finished
[2025-02-20 09:05:42] 2025-02-20 08:05:31,403 | INFO     | [payload] validate_pre thread has finished
[2025-02-20 09:05:42] 2025-02-20 08:05:31,698 | INFO     | [job] validate thread has finished
[2025-02-20 09:05:42] 2025-02-20 08:05:31,798 | INFO     | [data] control thread has finished
[2025-02-20 09:05:42] 2025-02-20 08:05:31,927 | INFO     | [payload] validate_post thread has finished
[2025-02-20 09:05:42] 2025-02-20 08:05:31,987 | INFO     | [data] copytool_out thread has finished
[2025-02-20 09:05:42] 2025-02-20 08:05:32,126 | INFO     | [payload] execute_payloads thread has finished
[2025-02-20 09:05:42] 2025-02-20 08:05:32,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-20 09:05:42] 2025-02-20 08:05:32,733 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-20 09:05:42] 2025-02-20 08:05:33,560 | INFO     | [job] queue monitor thread has finished
[2025-02-20 09:05:42] 2025-02-20 08:05:36,739 | INFO     | [data] queue_monitor thread has finished
[2025-02-20 09:05:42] 2025-02-20 08:05:37,120 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22889153673024)>', '<ExcThread(monitor, started 22888916674304)>']
[2025-02-20 09:05:42] 2025-02-20 08:05:37,550 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-20 09:05:42] 2025-02-20 08:05:37,551 | INFO     | [monitor] control thread has ended
[2025-02-20 09:05:42] 2025-02-20 08:05:42,137 | INFO     | all workflow threads have been joined
[2025-02-20 09:05:42] 2025-02-20 08:05:42,137 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-20 09:05:42] 2025-02-20 08:05:42,138 | INFO     | traces error code: 0
[2025-02-20 09:05:42] 2025-02-20 08:05:42,138 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-20 09:05:42] 2025-02-20 08:05:42,245 [wrapper] ==== pilot stdout END ====
[2025-02-20 09:05:42] 2025-02-20 08:05:42,248 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-20 09:05:42] 2025-02-20 08:05:42,250 [wrapper] pilotpid: 3490991
[2025-02-20 09:05:42] 2025-02-20 08:05:42,252 [wrapper] Pilot exit status: 0
[2025-02-20 09:05:42] 2025-02-20 08:05:42,261 [wrapper] pandaids: 6518835949
[2025-02-20 09:05:42] 2025-02-20 08:05:42,298 [wrapper] cleanup supervisor_pilot 4050404 3490992
[2025-02-20 09:05:42] 2025-02-20 08:05:42,300 [wrapper] Test setup, not cleaning
[2025-02-20 09:05:42] 2025-02-20 08:05:42,305 [wrapper] apfmon messages muted
[2025-02-20 09:05:42] 2025-02-20 08:05:42,307 [wrapper] ==== wrapper stdout END ====
[2025-02-20 09:05:42] 2025-02-20 08:05:42,309 [wrapper] ==== wrapper stderr END ====
[2025-02-20 09:05:42]  *** Error codes and diagnostics ***
[2025-02-20 09:05:42]     "exeErrorCode": 0,
[2025-02-20 09:05:42]     "exeErrorDiag": "",
[2025-02-20 09:05:42]     "pilotErrorCode": 0,
[2025-02-20 09:05:42]     "pilotErrorDiag": "",
[2025-02-20 09:05:42]  *** Listing of results directory ***
[2025-02-20 09:05:42] total 670556
[2025-02-20 09:05:42] -rwx------ 1 boinc boinc     35865 Feb 19 14:23 runpilot2-wrapper.sh
[2025-02-20 09:05:42] -rw-r--r-- 1 boinc boinc      5118 Feb 19 14:23 queuedata.json
[2025-02-20 09:05:42] -rw-r--r-- 1 boinc boinc    491065 Feb 19 14:23 pilot3.tar.gz
[2025-02-20 09:05:42] -rw-r--r-- 1 boinc boinc       100 Feb 20 01:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-20 09:05:42] -rwxr-xr-x 1 boinc boinc      7986 Feb 20 01:40 run_atlas
[2025-02-20 09:05:42] -rw-r--r-- 1 boinc boinc       105 Feb 20 01:40 job.xml
[2025-02-20 09:05:42] -rw-r--r-- 1 boinc boinc      6415 Feb 20 01:40 init_data.xml
[2025-02-20 09:05:42] -rw-r--r-- 2 boinc boinc 346026579 Feb 20 01:40 EVNT.43092757._001157.pool.root.1
[2025-02-20 09:05:42] -rw-r--r-- 2 boinc boinc     17569 Feb 20 01:40 start_atlas.sh
[2025-02-20 09:05:42] drwxrwx--x 2 boinc boinc      4096 Feb 20 01:40 shared
[2025-02-20 09:05:42] -rw-r--r-- 2 boinc boinc    503539 Feb 20 01:40 input.tar.gz
[2025-02-20 09:05:42] -rw-r--r-- 1 boinc boinc         0 Feb 20 01:40 boinc_lockfile
[2025-02-20 09:05:42] -rw-r--r-- 1 boinc boinc      2557 Feb 20 01:40 pandaJob.out
[2025-02-20 09:05:42] -rw------- 1 boinc boinc       424 Feb 20 01:40 setup.sh.local
[2025-02-20 09:05:42] -rw------- 1 boinc boinc    985850 Feb 20 01:40 agis_schedconf.cvmfs.json
[2025-02-20 09:05:42] drwx------ 4 boinc boinc      4096 Feb 20 01:41 pilot3
[2025-02-20 09:05:42] -rw------- 1 boinc boinc 329744060 Feb 20 09:04 HITS.43205075._049982.pool.root.1
[2025-02-20 09:05:42] -rw------- 1 boinc boinc        95 Feb 20 09:04 pilot_heartbeat.json
[2025-02-20 09:05:42] -rw-r--r-- 1 boinc boinc       532 Feb 20 09:04 boinc_task_state.xml
[2025-02-20 09:05:42] -rw------- 1 boinc boinc      1031 Feb 20 09:05 memory_monitor_summary.json
[2025-02-20 09:05:42] -rw------- 1 boinc boinc   1586690 Feb 20 09:05 agis_ddmendpoints.agis.ALL.json
[2025-02-20 09:05:42] -rw------- 1 boinc boinc    484109 Feb 20 09:05 log.43205075._049982.job.log.tgz.1
[2025-02-20 09:05:42] -rw------- 1 boinc boinc      7741 Feb 20 09:05 heartbeat.json
[2025-02-20 09:05:42] -rw-r--r-- 1 boinc boinc      8192 Feb 20 09:05 boinc_mmap_file
[2025-02-20 09:05:42] -rw-r--r-- 1 boinc boinc        29 Feb 20 09:05 wrapper_checkpoint.txt
[2025-02-20 09:05:42] -rw------- 1 boinc boinc      4411 Feb 20 09:05 pilotlog.txt
[2025-02-20 09:05:42] -rw------- 1 boinc boinc   3051098 Feb 20 09:05 log.43205075._049982.job.log.1
[2025-02-20 09:05:42] -rw------- 1 boinc boinc       357 Feb 20 09:05 output.list
[2025-02-20 09:05:42] -rw-r--r-- 1 boinc boinc       620 Feb 20 09:05 runtime_log
[2025-02-20 09:05:42] -rw------- 1 boinc boinc   3553280 Feb 20 09:05 result.tar.gz
[2025-02-20 09:05:42] -rw-r--r-- 1 boinc boinc     11400 Feb 20 09:05 runtime_log.err
[2025-02-20 09:05:42] -rw------- 1 boinc boinc       666 Feb 20 09:05 NgbNDmYEz46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmX6nKDmM0R6Um.diag
[2025-02-20 09:05:42] -rw-r--r-- 1 boinc boinc     21529 Feb 20 09:05 stderr.txt
[2025-02-20 09:05:42] HITS file was successfully produced:
[2025-02-20 09:05:42] -rw------- 1 boinc boinc 329744060 Feb 20 09:04 shared/HITS.pool.root.1
[2025-02-20 09:05:42]  *** Contents of shared directory: ***
[2025-02-20 09:05:42] total 663928
[2025-02-20 09:05:42] -rw-r--r-- 2 boinc boinc 346026579 Feb 20 01:40 ATLAS.root_0
[2025-02-20 09:05:42] -rw-r--r-- 2 boinc boinc     17569 Feb 20 01:40 start_atlas.sh
[2025-02-20 09:05:42] -rw-r--r-- 2 boinc boinc    503539 Feb 20 01:40 input.tar.gz
[2025-02-20 09:05:42] -rw------- 1 boinc boinc 329744060 Feb 20 09:04 HITS.pool.root.1
[2025-02-20 09:05:42] -rw------- 1 boinc boinc   3553280 Feb 20 09:05 result.tar.gz
09:05:43 (3485463): run_atlas exited; CPU time 102326.720924
09:05:43 (3485463): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN