Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:59:40 (3096446): wrapper (7.7.26015): starting
19:59:40 (3096446): wrapper: running run_atlas (--nthreads 4)
[2025-02-20 19:59:40] Arguments: --nthreads 4
[2025-02-20 19:59:40] Threads: 4
[2025-02-20 19:59:40] Checking for CVMFS
[2025-02-20 19:59:40] No cvmfs_config command found, will try listing directly
[2025-02-20 19:59:40] CVMFS is ok
[2025-02-20 19:59:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-20 19:59:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-20 19:59:40] Further information can be found at the LHC@home message board.
[2025-02-20 19:59:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-20 19:59:40] Checking for apptainer binary...
[2025-02-20 19:59:40] which: no apptainer in ((null))
[2025-02-20 19:59:40] apptainer is not installed, using version from CVMFS
[2025-02-20 19:59:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-20 19:59:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-02-20 19:59:40] apptainer works
[2025-02-20 19:59:40] Set ATHENA_PROC_NUMBER=4
[2025-02-20 19:59:40] Set ATHENA_CORE_NUMBER=4
[2025-02-20 19:59:40] Starting ATLAS job with PandaID=6518835517
[2025-02-20 19:59:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-21 02:23:08]  *** The last 200 lines of the pilot log: ***
[2025-02-21 02:23:08] 2025-02-21 01:22:47,523 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-21 02:23:08] 2025-02-21 01:22:47,523 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-21 02:23:08] 2025-02-21 01:22:47,530 | INFO     | fitting pss+swap vs Time
[2025-02-21 02:23:08] 2025-02-21 01:22:47,530 | INFO     | model: linear, x: [1740078015.0, 1740078076.0, 1740078137.0, 1740078198.0, 1740078259.0, 1740078320.0, 1740078381.0, 1740078442.0, 1740078503.0, 1740078564.0, 1740
[2025-02-21 02:23:08] 2025-02-21 01:22:47,531 | INFO     | sum of square deviations: 16614964548.0
[2025-02-21 02:23:08] 2025-02-21 01:22:47,534 | INFO     | sum of deviations: 161836012362.99997
[2025-02-21 02:23:08] 2025-02-21 01:22:47,534 | INFO     | mean x: 1740089483.0
[2025-02-21 02:23:08] 2025-02-21 01:22:47,534 | INFO     | mean y: 2334720.2413793104
[2025-02-21 02:23:08] 2025-02-21 01:22:47,534 | INFO     | -- intersect: -16946792211.083462
[2025-02-21 02:23:08] 2025-02-21 01:22:47,534 | INFO     | intersect: -16946792211.083462
[2025-02-21 02:23:08] 2025-02-21 01:22:47,535 | INFO     | chi2: 4.530557860773243
[2025-02-21 02:23:08] 2025-02-21 01:22:47,535 | INFO     | model: linear, x: [1740078015.0, 1740078076.0, 1740078137.0, 1740078198.0, 1740078259.0, 1740078320.0, 1740078381.0, 1740078442.0, 1740078503.0, 1740078564.0, 1740
[2025-02-21 02:23:08] 2025-02-21 01:22:47,536 | INFO     | sum of square deviations: 15962617433.0
[2025-02-21 02:23:08] 2025-02-21 01:22:47,539 | INFO     | sum of deviations: 183126530805.50012
[2025-02-21 02:23:08] 2025-02-21 01:22:47,539 | INFO     | mean x: 1740089330.5
[2025-02-21 02:23:08] 2025-02-21 01:22:47,539 | INFO     | mean y: 2339638.2177419355
[2025-02-21 02:23:08] 2025-02-21 01:22:47,539 | INFO     | -- intersect: -19960334009.987476
[2025-02-21 02:23:08] 2025-02-21 01:22:47,539 | INFO     | intersect: -19960334009.987476
[2025-02-21 02:23:08] 2025-02-21 01:22:47,540 | INFO     | chi2: 3.7822088260298297
[2025-02-21 02:23:08] 2025-02-21 01:22:47,540 | INFO     | current chi2=3.7822088260298297 (change=16.517812104836256 %)
[2025-02-21 02:23:08] 2025-02-21 01:22:47,540 | INFO     | right removable region: 371
[2025-02-21 02:23:08] 2025-02-21 01:22:47,540 | INFO     | model: linear, x: [1740078320.0, 1740078381.0, 1740078442.0, 1740078503.0, 1740078564.0, 1740078625.0, 1740078686.0, 1740078747.0, 1740078808.0, 1740078869.0, 1740
[2025-02-21 02:23:08] 2025-02-21 01:22:47,541 | INFO     | sum of square deviations: 15962617433.0
[2025-02-21 02:23:08] 2025-02-21 01:22:47,544 | INFO     | sum of deviations: 75182407432.5
[2025-02-21 02:23:08] 2025-02-21 01:22:47,544 | INFO     | mean x: 1740089635.5
[2025-02-21 02:23:08] 2025-02-21 01:22:47,544 | INFO     | mean y: 2354940.884408602
[2025-02-21 02:23:08] 2025-02-21 01:22:47,544 | INFO     | -- intersect: -8193301472.879836
[2025-02-21 02:23:08] 2025-02-21 01:22:47,544 | INFO     | intersect: -8193301472.879836
[2025-02-21 02:23:08] 2025-02-21 01:22:47,545 | INFO     | chi2: 2.2157656779141766
[2025-02-21 02:23:08] 2025-02-21 01:22:47,545 | INFO     | current chi2=2.2157656779141766 (change=51.09287319561998 %)
[2025-02-21 02:23:08] 2025-02-21 01:22:47,545 | INFO     | model: linear, x: [1740078625.0, 1740078686.0, 1740078747.0, 1740078808.0, 1740078869.0, 1740078930.0, 1740078991.0, 1740079052.0, 1740079113.0, 1740079174.0, 1740
[2025-02-21 02:23:08] 2025-02-21 01:22:47,546 | INFO     | sum of square deviations: 15327572968.0
[2025-02-21 02:23:08] 2025-02-21 01:22:47,549 | INFO     | sum of deviations: 6724167250.0
[2025-02-21 02:23:08] 2025-02-21 01:22:47,549 | INFO     | mean x: 1740089788.0
[2025-02-21 02:23:08] 2025-02-21 01:22:47,549 | INFO     | mean y: 2371385.752043597
[2025-02-21 02:23:08] 2025-02-21 01:22:47,549 | INFO     | -- intersect: -761001575.443899
[2025-02-21 02:23:08] 2025-02-21 01:22:47,549 | INFO     | intersect: -761001575.443899
[2025-02-21 02:23:08] 2025-02-21 01:22:47,550 | INFO     | chi2: 0.9014371219423627
[2025-02-21 02:23:08] 2025-02-21 01:22:47,550 | INFO     | current chi2=0.9014371219423627 (change=59.317127667085465 %)
[2025-02-21 02:23:08] 2025-02-21 01:22:47,550 | INFO     | model: linear, x: [1740078930.0, 1740078991.0, 1740079052.0, 1740079113.0, 1740079174.0, 1740079235.0, 1740079296.0, 1740079357.0, 1740079418.0, 1740079479.0, 1740
[2025-02-21 02:23:08] 2025-02-21 01:22:47,551 | INFO     | sum of square deviations: 14709598590.5
[2025-02-21 02:23:08] 2025-02-21 01:22:47,554 | INFO     | sum of deviations: -12619935681.5
[2025-02-21 02:23:08] 2025-02-21 01:22:47,554 | INFO     | mean x: 1740089940.5
[2025-02-21 02:23:08] 2025-02-21 01:22:47,554 | INFO     | mean y: 2376144.649171271
[2025-02-21 02:23:08] 2025-02-21 01:22:47,554 | INFO     | -- intersect: 1495266857.7456949
[2025-02-21 02:23:08] 2025-02-21 01:22:47,554 | INFO     | intersect: 1495266857.7456949
[2025-02-21 02:23:08] 2025-02-21 01:22:47,555 | INFO     | chi2: 0.7723493599296491
[2025-02-21 02:23:08] 2025-02-21 01:22:47,555 | INFO     | current chi2=0.7723493599296491 (change=14.320218112891 %)
[2025-02-21 02:23:08] 2025-02-21 01:22:47,555 | INFO     | left removable region: 30
[2025-02-21 02:23:08] 2025-02-21 01:22:47,555 | INFO     | model: linear, x: [1740079845.0, 1740079906.0, 1740079967.0, 1740080028.0, 1740080089.0, 1740080150.0, 1740080211.0, 1740080272.0, 1740080333.0, 1740080394.0, 1740
[2025-02-21 02:23:08] 2025-02-21 01:22:47,556 | INFO     | sum of square deviations: 12295263090.0
[2025-02-21 02:23:08] 2025-02-21 01:22:47,559 | INFO     | sum of deviations: 7014603927.000002
[2025-02-21 02:23:08] 2025-02-21 01:22:47,559 | INFO     | mean x: 1740090215.0
[2025-02-21 02:23:08] 2025-02-21 01:22:47,559 | INFO     | mean y: 2382660.9941348974
[2025-02-21 02:23:08] 2025-02-21 01:22:47,559 | INFO     | -- intersect: -990360931.8941469
[2025-02-21 02:23:08] 2025-02-21 01:22:47,559 | INFO     | intersect: -990360931.8941469
[2025-02-21 02:23:08] 2025-02-21 01:22:47,560 | INFO     | chi2: 0.002077778875211452
[2025-02-21 02:23:08] 2025-02-21 01:22:47,560 | INFO     | -- intersect: -990360931.8941469
[2025-02-21 02:23:08] 2025-02-21 01:22:47,560 | INFO     | current memory leak: 0.57 B/s (using 341 data points, chi2=0.00)
[2025-02-21 02:23:08] 2025-02-21 01:22:47,561 | INFO     | ..............................
[2025-02-21 02:23:08] 2025-02-21 01:22:47,561 | INFO     | . Timing measurements:
[2025-02-21 02:23:08] 2025-02-21 01:22:47,561 | INFO     | . get job = 0 s
[2025-02-21 02:23:08] 2025-02-21 01:22:47,561 | INFO     | . initial setup = 1 s
[2025-02-21 02:23:08] 2025-02-21 01:22:47,561 | INFO     | . payload setup = 5 s
[2025-02-21 02:23:08] 2025-02-21 01:22:47,561 | INFO     | . stage-in = 0 s
[2025-02-21 02:23:08] 2025-02-21 01:22:47,561 | INFO     | . payload execution = 22947 s
[2025-02-21 02:23:08] 2025-02-21 01:22:47,561 | INFO     | . stage-out = 1 s
[2025-02-21 02:23:08] 2025-02-21 01:22:47,561 | INFO     | . log creation = 0 s
[2025-02-21 02:23:08] 2025-02-21 01:22:47,562 | INFO     | ..............................
[2025-02-21 02:23:08] 2025-02-21 01:22:47,852 | INFO     | 
[2025-02-21 02:23:08] 2025-02-21 01:22:47,853 | INFO     | job summary report
[2025-02-21 02:23:08] 2025-02-21 01:22:47,853 | INFO     | --------------------------------------------------
[2025-02-21 02:23:08] 2025-02-21 01:22:47,853 | INFO     | PanDA job id: 6518835517
[2025-02-21 02:23:08] 2025-02-21 01:22:47,853 | INFO     | task id: 43205094
[2025-02-21 02:23:08] 2025-02-21 01:22:47,853 | INFO     | errors: (none)
[2025-02-21 02:23:08] 2025-02-21 01:22:47,853 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-21 02:23:08] 2025-02-21 01:22:47,853 | INFO     | pilot state: finished 
[2025-02-21 02:23:08] 2025-02-21 01:22:47,853 | INFO     | transexitcode: 0
[2025-02-21 02:23:08] 2025-02-21 01:22:47,853 | INFO     | exeerrorcode: 0
[2025-02-21 02:23:08] 2025-02-21 01:22:47,853 | INFO     | exeerrordiag: 
[2025-02-21 02:23:08] 2025-02-21 01:22:47,853 | INFO     | exitcode: 0
[2025-02-21 02:23:08] 2025-02-21 01:22:47,854 | INFO     | exitmsg: OK
[2025-02-21 02:23:08] 2025-02-21 01:22:47,854 | INFO     | cpuconsumptiontime: 87686 s
[2025-02-21 02:23:08] 2025-02-21 01:22:47,854 | INFO     | nevents: 400
[2025-02-21 02:23:08] 2025-02-21 01:22:47,854 | INFO     | neventsw: 0
[2025-02-21 02:23:08] 2025-02-21 01:22:47,854 | INFO     | pid: 3117719
[2025-02-21 02:23:08] 2025-02-21 01:22:47,854 | INFO     | pgrp: 3117719
[2025-02-21 02:23:08] 2025-02-21 01:22:47,854 | INFO     | corecount: 4
[2025-02-21 02:23:08] 2025-02-21 01:22:47,854 | INFO     | event service: False
[2025-02-21 02:23:08] 2025-02-21 01:22:47,854 | INFO     | sizes: {0: 2389153, 1: 2389408, 5: 2389614, 12: 2389670, 22956: 2424177, 22958: 2433324, 22963: 2433438}
[2025-02-21 02:23:08] 2025-02-21 01:22:47,854 | INFO     | --------------------------------------------------
[2025-02-21 02:23:08] 2025-02-21 01:22:47,854 | INFO     | 
[2025-02-21 02:23:08] 2025-02-21 01:22:47,854 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2025-02-21 02:23:08] 2025-02-21 01:22:47,875 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-21 02:23:08] 2025-02-21 01:22:47,875 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-21 02:23:08] 2025-02-21 01:22:47,876 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-21 02:23:08] 2025-02-21 01:22:47,876 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-21 02:23:08] 2025-02-21 01:22:47,876 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-21 02:23:08] 2025-02-21 01:22:47,876 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-21 02:23:08] 2025-02-21 01:22:47,876 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-21 02:23:08] 2025-02-21 01:22:47,876 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-21 02:23:08] 2025-02-21 01:22:47,876 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-21 02:23:08] 2025-02-21 01:22:47,876 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-21 02:23:08] 2025-02-21 01:22:47,876 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-21 02:23:08] 2025-02-21 01:22:47,876 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-21 02:23:08] 2025-02-21 01:22:47,876 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-21 02:23:08] 2025-02-21 01:22:47,877 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-21 02:23:08] 2025-02-21 01:22:47,877 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-21 02:23:08] 2025-02-21 01:22:47,877 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-21 02:23:08] 2025-02-21 01:22:47,877 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-21 02:23:08] 2025-02-21 01:22:47,877 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-21 02:23:08] 2025-02-21 01:22:47,877 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-21 02:23:08] 2025-02-21 01:22:47,877 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-21 02:23:08] 2025-02-21 01:22:47,877 | INFO     | job 6518835517 has completed (purged errors)
[2025-02-21 02:23:08] 2025-02-21 01:22:47,877 | INFO     | overall cleanup function is called
[2025-02-21 02:23:08] 2025-02-21 01:22:48,885 | INFO     | --- collectZombieJob: --- 10, [3117719]
[2025-02-21 02:23:08] 2025-02-21 01:22:48,885 | INFO     | zombie collector waiting for pid 3117719
[2025-02-21 02:23:08] 2025-02-21 01:22:48,885 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-21 02:23:08] 2025-02-21 01:22:48,885 | INFO     | collected zombie processes
[2025-02-21 02:23:08] 2025-02-21 01:22:48,885 | INFO     | will attempt to kill all subprocesses of pid=3117719
[2025-02-21 02:23:08] 2025-02-21 01:22:49,027 | INFO     | process IDs to be killed: [3117719] (in reverse order)
[2025-02-21 02:23:08] 2025-02-21 01:22:49,133 | WARNING  | found no corresponding commands to process id(s)
[2025-02-21 02:23:08] 2025-02-21 01:22:49,133 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-21 02:23:08] 2025-02-21 01:22:49,142 | INFO     | did not find any defunct processes belonging to 3117719
[2025-02-21 02:23:08] 2025-02-21 01:22:49,151 | INFO     | did not find any defunct processes belonging to 3117719
[2025-02-21 02:23:08] 2025-02-21 01:22:49,152 | INFO     | ready for new job
[2025-02-21 02:23:08] 2025-02-21 01:22:49,152 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-21 02:23:08] 2025-02-21 01:22:49,154 | INFO     | **************************************
[2025-02-21 02:23:08] 2025-02-21 01:22:49,154 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-21 02:23:08] 2025-02-21 01:22:49,154 | INFO     | **************************************
[2025-02-21 02:23:08] 2025-02-21 01:22:49,154 | INFO     | 
[2025-02-21 02:23:08] 2025-02-21 01:22:49,158 | INFO     | architecture information:
[2025-02-21 02:23:08] 2025-02-21 01:22:49,159 | INFO     | executing command: cat /etc/os-release
[2025-02-21 02:23:08] 2025-02-21 01:22:49,174 | INFO     | cat /etc/os-release:
[2025-02-21 02:23:08] NAME="CentOS Linux"
[2025-02-21 02:23:08] VERSION="7 (Core)"
[2025-02-21 02:23:08] ID="centos"
[2025-02-21 02:23:08] ID_LIKE="rhel fedora"
[2025-02-21 02:23:08] VERSION_ID="7"
[2025-02-21 02:23:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-21 02:23:08] ANSI_COLOR="0;31"
[2025-02-21 02:23:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-21 02:23:08] HOME_URL="https://www.centos.org/"
[2025-02-21 02:23:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-21 02:23:08] 
[2025-02-21 02:23:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-21 02:23:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-21 02:23:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-21 02:23:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-21 02:23:08] 
[2025-02-21 02:23:08] 2025-02-21 01:22:49,174 | INFO     | **************************************
[2025-02-21 02:23:08] 2025-02-21 01:22:49,677 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2025-02-21 02:23:08] 2025-02-21 01:22:49,693 | INFO     | sufficient remaining disk space (662492413952 B)
[2025-02-21 02:23:08] 2025-02-21 01:22:49,693 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-21 02:23:08] 2025-02-21 01:22:49,694 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-21 02:23:08] 2025-02-21 01:22:49,694 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-21 02:23:08] 2025-02-21 01:22:49,919 | INFO     | all job control threads have been joined
[2025-02-21 02:23:08] 2025-02-21 01:22:50,082 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-21 02:23:08] 2025-02-21 01:22:50,082 | INFO     | aborting loop
[2025-02-21 02:23:08] 2025-02-21 01:22:50,106 | INFO     | found 0 job(s) in 20 queues
[2025-02-21 02:23:08] 2025-02-21 01:22:50,106 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-21 02:23:08] 2025-02-21 01:22:50,106 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-21 02:23:08] 2025-02-21 01:22:50,336 | INFO     | all data control threads have been joined
[2025-02-21 02:23:08] 2025-02-21 01:22:50,699 | INFO     | [job] retrieve thread has finished
[2025-02-21 02:23:08] 2025-02-21 01:22:50,745 | INFO     | [job] create_data_payload thread has finished
[2025-02-21 02:23:08] 2025-02-21 01:22:50,857 | INFO     | [payload] validate_pre thread has finished
[2025-02-21 02:23:08] 2025-02-21 01:22:50,925 | INFO     | [job] control thread has finished
[2025-02-21 02:23:08] 2025-02-21 01:22:50,932 | INFO     | all payload control threads have been joined
[2025-02-21 02:23:08] 2025-02-21 01:22:51,087 | INFO     | [job] job monitor thread has finished
[2025-02-21 02:23:08] 2025-02-21 01:22:51,115 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-21 02:23:08] 2025-02-21 01:22:51,149 | INFO     | [payload] execute_payloads thread has finished
[2025-02-21 02:23:08] 2025-02-21 01:22:51,282 | INFO     | [payload] failed_post thread has finished
[2025-02-21 02:23:08] 2025-02-21 01:22:51,341 | INFO     | [data] control thread has finished
[2025-02-21 02:23:08] 2025-02-21 01:22:51,866 | INFO     | [payload] validate_post thread has finished
[2025-02-21 02:23:08] 2025-02-21 01:22:51,933 | INFO     | [payload] control thread has finished
[2025-02-21 02:23:08] 2025-02-21 01:22:51,998 | INFO     | [job] validate thread has finished
[2025-02-21 02:23:08] 2025-02-21 01:22:52,060 | INFO     | [data] copytool_in thread has finished
[2025-02-21 02:23:08] 2025-02-21 01:22:52,667 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-21 02:23:08] 2025-02-21 01:22:53,120 | INFO     | [data] copytool_out thread has finished
[2025-02-21 02:23:08] 2025-02-21 01:22:53,672 | INFO     | [job] queue monitor thread has finished
[2025-02-21 02:23:08] 2025-02-21 01:22:53,699 | INFO     | [data] queue_monitor thread has finished
[2025-02-21 02:23:08] 2025-02-21 01:23:00,340 | INFO     | job.realtimelogging is not enabled
[2025-02-21 02:23:08] 2025-02-21 01:23:01,341 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-21 02:23:08] 2025-02-21 01:23:03,066 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23304859805504)>', '<ExcThread(monitor, started 23304412829440)>']
[2025-02-21 02:23:08] 2025-02-21 01:23:03,158 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-21 02:23:08] 2025-02-21 01:23:03,158 | INFO     | [monitor] control thread has ended
[2025-02-21 02:23:08] 2025-02-21 01:23:08,091 | INFO     | all workflow threads have been joined
[2025-02-21 02:23:08] 2025-02-21 01:23:08,091 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-21 02:23:08] 2025-02-21 01:23:08,091 | INFO     | traces error code: 0
[2025-02-21 02:23:08] 2025-02-21 01:23:08,092 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-21 02:23:08] 2025-02-21 01:23:08,226 [wrapper] ==== pilot stdout END ====
[2025-02-21 02:23:08] 2025-02-21 01:23:08,229 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-21 02:23:08] 2025-02-21 01:23:08,232 [wrapper] pilotpid: 3103640
[2025-02-21 02:23:08] 2025-02-21 01:23:08,234 [wrapper] Pilot exit status: 0
[2025-02-21 02:23:08] 2025-02-21 01:23:08,243 [wrapper] pandaids: 6518835517
[2025-02-21 02:23:08] 2025-02-21 01:23:08,305 [wrapper] cleanup supervisor_pilot 4002872 3103641
[2025-02-21 02:23:08] 2025-02-21 01:23:08,308 [wrapper] Test setup, not cleaning
[2025-02-21 02:23:08] 2025-02-21 01:23:08,314 [wrapper] apfmon messages muted
[2025-02-21 02:23:08] 2025-02-21 01:23:08,316 [wrapper] ==== wrapper stdout END ====
[2025-02-21 02:23:08] 2025-02-21 01:23:08,319 [wrapper] ==== wrapper stderr END ====
[2025-02-21 02:23:08]  *** Error codes and diagnostics ***
[2025-02-21 02:23:08]     "exeErrorCode": 0,
[2025-02-21 02:23:08]     "exeErrorDiag": "",
[2025-02-21 02:23:08]     "pilotErrorCode": 0,
[2025-02-21 02:23:08]     "pilotErrorDiag": "",
[2025-02-21 02:23:08]  *** Listing of results directory ***
[2025-02-21 02:23:08] total 659200
[2025-02-21 02:23:08] -rw-r--r-- 1 boinc boinc    491065 Feb 19 13:21 pilot3.tar.gz
[2025-02-21 02:23:08] -rw-r--r-- 1 boinc boinc      5118 Feb 19 13:45 queuedata.json
[2025-02-21 02:23:08] -rwx------ 1 boinc boinc     35865 Feb 19 13:46 runpilot2-wrapper.sh
[2025-02-21 02:23:08] -rw-r--r-- 1 boinc boinc       100 Feb 20 19:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-21 02:23:08] -rwxr-xr-x 1 boinc boinc      7986 Feb 20 19:59 run_atlas
[2025-02-21 02:23:08] -rw-r--r-- 1 boinc boinc       105 Feb 20 19:59 job.xml
[2025-02-21 02:23:08] -rw-r--r-- 2 boinc boinc 343016970 Feb 20 19:59 EVNT.43092757._001599.pool.root.1
[2025-02-21 02:23:08] -rw-r--r-- 1 boinc boinc      6636 Feb 20 19:59 init_data.xml
[2025-02-21 02:23:08] -rw-r--r-- 2 boinc boinc     17569 Feb 20 19:59 start_atlas.sh
[2025-02-21 02:23:08] drwxrwx--x 2 boinc boinc      4096 Feb 20 19:59 shared
[2025-02-21 02:23:08] -rw-r--r-- 2 boinc boinc    503562 Feb 20 19:59 input.tar.gz
[2025-02-21 02:23:08] -rw-r--r-- 1 boinc boinc         0 Feb 20 19:59 boinc_lockfile
[2025-02-21 02:23:08] -rw-r--r-- 1 boinc boinc      2549 Feb 20 19:59 pandaJob.out
[2025-02-21 02:23:08] -rw------- 1 boinc boinc       424 Feb 20 19:59 setup.sh.local
[2025-02-21 02:23:08] -rw------- 1 boinc boinc    994379 Feb 20 19:59 agis_schedconf.cvmfs.json
[2025-02-21 02:23:08] drwx------ 4 boinc boinc      4096 Feb 20 19:59 pilot3
[2025-02-21 02:23:08] -rw-r--r-- 1 boinc boinc       531 Feb 21 02:21 boinc_task_state.xml
[2025-02-21 02:23:08] -rw------- 1 boinc boinc 322054237 Feb 21 02:21 HITS.43205094._020593.pool.root.1
[2025-02-21 02:23:08] -rw------- 1 boinc boinc        95 Feb 21 02:22 pilot_heartbeat.json
[2025-02-21 02:23:08] -rw------- 1 boinc boinc      1035 Feb 21 02:22 memory_monitor_summary.json
[2025-02-21 02:23:08] -rw------- 1 boinc boinc   1586690 Feb 21 02:22 agis_ddmendpoints.agis.ALL.json
[2025-02-21 02:23:08] -rw------- 1 boinc boinc    458190 Feb 21 02:22 log.43205094._020593.job.log.tgz.1
[2025-02-21 02:23:08] -rw------- 1 boinc boinc      7737 Feb 21 02:22 heartbeat.json
[2025-02-21 02:23:08] -rw-r--r-- 1 boinc boinc      8192 Feb 21 02:22 boinc_mmap_file
[2025-02-21 02:23:08] -rw-r--r-- 1 boinc boinc        28 Feb 21 02:22 wrapper_checkpoint.txt
[2025-02-21 02:23:08] -rw------- 1 boinc boinc      4297 Feb 21 02:23 pilotlog.txt
[2025-02-21 02:23:08] -rw------- 1 boinc boinc   2609873 Feb 21 02:23 log.43205094._020593.job.log.1
[2025-02-21 02:23:08] -rw------- 1 boinc boinc       357 Feb 21 02:23 output.list
[2025-02-21 02:23:08] -rw-r--r-- 1 boinc boinc       620 Feb 21 02:23 runtime_log
[2025-02-21 02:23:08] -rw------- 1 boinc boinc   3082240 Feb 21 02:23 result.tar.gz
[2025-02-21 02:23:08] -rw-r--r-- 1 boinc boinc     11424 Feb 21 02:23 runtime_log.err
[2025-02-21 02:23:08] -rw------- 1 boinc boinc       666 Feb 21 02:23 FEvNDmAey46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmb3nKDmMpKw1m.diag
[2025-02-21 02:23:08] -rw-r--r-- 1 boinc boinc     21269 Feb 21 02:23 stderr.txt
[2025-02-21 02:23:08] HITS file was successfully produced:
[2025-02-21 02:23:08] -rw------- 1 boinc boinc 322054237 Feb 21 02:21 shared/HITS.pool.root.1
[2025-02-21 02:23:08]  *** Contents of shared directory: ***
[2025-02-21 02:23:08] total 653020
[2025-02-21 02:23:08] -rw-r--r-- 2 boinc boinc 343016970 Feb 20 19:59 ATLAS.root_0
[2025-02-21 02:23:08] -rw-r--r-- 2 boinc boinc     17569 Feb 20 19:59 start_atlas.sh
[2025-02-21 02:23:08] -rw-r--r-- 2 boinc boinc    503562 Feb 20 19:59 input.tar.gz
[2025-02-21 02:23:08] -rw------- 1 boinc boinc 322054237 Feb 21 02:21 HITS.pool.root.1
[2025-02-21 02:23:08] -rw------- 1 boinc boinc   3082240 Feb 21 02:23 result.tar.gz
02:23:09 (3096446): run_atlas exited; CPU time 87771.831938
02:23:09 (3096446): called boinc_finish(0)

</stderr_txt>
]]>

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