Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:07:58 (201857): wrapper (7.7.26015): starting
13:07:58 (201857): wrapper: running run_atlas (--nthreads 4)
[2025-02-20 13:07:58] Arguments: --nthreads 4
[2025-02-20 13:07:58] Threads: 4
[2025-02-20 13:07:58] Checking for CVMFS
[2025-02-20 13:07:58] No cvmfs_config command found, will try listing directly
[2025-02-20 13:07:58] CVMFS is ok
[2025-02-20 13:07:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-20 13:07:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-20 13:07:58] Further information can be found at the LHC@home message board.
[2025-02-20 13:07:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-20 13:07:58] Checking for apptainer binary...
[2025-02-20 13:07:58] which: no apptainer in ((null))
[2025-02-20 13:07:58] apptainer is not installed, using version from CVMFS
[2025-02-20 13:07:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-20 13:07:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-02-20 13:07:58] apptainer works
[2025-02-20 13:07:58] Set ATHENA_PROC_NUMBER=4
[2025-02-20 13:07:58] Set ATHENA_CORE_NUMBER=4
[2025-02-20 13:07:59] Starting ATLAS job with PandaID=6518558524
[2025-02-20 13:07:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-20 19:10:08]  *** The last 200 lines of the pilot log: ***
[2025-02-20 19:10:08] 2025-02-20 18:09:55,008 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-20 19:10:08] 2025-02-20 18:09:55,008 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-20 19:10:08] 2025-02-20 18:09:55,008 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-20 19:10:08] 2025-02-20 18:09:55,015 | INFO     | fitting pss+swap vs Time
[2025-02-20 19:10:08] 2025-02-20 18:09:55,016 | INFO     | model: linear, x: [1740053326.0, 1740053387.0, 1740053448.0, 1740053509.0, 1740053570.0, 1740053631.0, 1740053692.0, 1740053753.0, 1740053814.0, 1740053875.0, 1740
[2025-02-20 19:10:08] 2025-02-20 18:09:55,017 | INFO     | sum of square deviations: 13990234405.0
[2025-02-20 19:10:08] 2025-02-20 18:09:55,021 | INFO     | sum of deviations: 177897745005.5
[2025-02-20 19:10:08] 2025-02-20 18:09:55,021 | INFO     | mean x: 1740064153.5
[2025-02-20 19:10:08] 2025-02-20 18:09:55,021 | INFO     | mean y: 2319388.7219101125
[2025-02-20 19:10:08] 2025-02-20 18:09:55,021 | INFO     | -- intersect: -22124078219.163933
[2025-02-20 19:10:08] 2025-02-20 18:09:55,021 | INFO     | intersect: -22124078219.163933
[2025-02-20 19:10:08] 2025-02-20 18:09:55,022 | INFO     | chi2: 4.95432906955684
[2025-02-20 19:10:08] 2025-02-20 18:09:55,022 | INFO     | model: linear, x: [1740053326.0, 1740053387.0, 1740053448.0, 1740053509.0, 1740053570.0, 1740053631.0, 1740053692.0, 1740053753.0, 1740053814.0, 1740053875.0, 1740
[2025-02-20 19:10:08] 2025-02-20 18:09:55,022 | INFO     | sum of square deviations: 13408995600.0
[2025-02-20 19:10:08] 2025-02-20 18:09:55,026 | INFO     | sum of deviations: 197527770918.99997
[2025-02-20 19:10:08] 2025-02-20 18:09:55,026 | INFO     | mean x: 1740064001.0
[2025-02-20 19:10:08] 2025-02-20 18:09:55,026 | INFO     | mean y: 2324471.438746439
[2025-02-20 19:10:08] 2025-02-20 18:09:55,026 | INFO     | -- intersect: -25630539736.0733
[2025-02-20 19:10:08] 2025-02-20 18:09:55,026 | INFO     | intersect: -25630539736.0733
[2025-02-20 19:10:08] 2025-02-20 18:09:55,027 | INFO     | chi2: 4.180951902965577
[2025-02-20 19:10:08] 2025-02-20 18:09:55,027 | INFO     | current chi2=4.180951902965577 (change=15.610129156407456 %)
[2025-02-20 19:10:08] 2025-02-20 18:09:55,027 | INFO     | right removable region: 350
[2025-02-20 19:10:08] 2025-02-20 18:09:55,027 | INFO     | model: linear, x: [1740053631.0, 1740053692.0, 1740053753.0, 1740053814.0, 1740053875.0, 1740053936.0, 1740053997.0, 1740054058.0, 1740054119.0, 1740054180.0, 1740
[2025-02-20 19:10:08] 2025-02-20 18:09:55,030 | INFO     | sum of square deviations: 13408995600.0
[2025-02-20 19:10:08] 2025-02-20 18:09:55,033 | INFO     | sum of deviations: 91985743732.0
[2025-02-20 19:10:08] 2025-02-20 18:09:55,033 | INFO     | mean x: 1740064306.0
[2025-02-20 19:10:08] 2025-02-20 18:09:55,033 | INFO     | mean y: 2341894.2934472933
[2025-02-20 19:10:08] 2025-02-20 18:09:55,034 | INFO     | -- intersect: -11934503646.092623
[2025-02-20 19:10:08] 2025-02-20 18:09:55,034 | INFO     | intersect: -11934503646.092623
[2025-02-20 19:10:08] 2025-02-20 18:09:55,034 | INFO     | chi2: 2.4278064780609094
[2025-02-20 19:10:08] 2025-02-20 18:09:55,034 | INFO     | current chi2=2.4278064780609094 (change=50.996261169263136 %)
[2025-02-20 19:10:08] 2025-02-20 18:09:55,035 | INFO     | model: linear, x: [1740053936.0, 1740053997.0, 1740054058.0, 1740054119.0, 1740054180.0, 1740054241.0, 1740054302.0, 1740054363.0, 1740054424.0, 1740054485.0, 1740
[2025-02-20 19:10:08] 2025-02-20 18:09:55,035 | INFO     | sum of square deviations: 12844082682.5
[2025-02-20 19:10:08] 2025-02-20 18:09:55,038 | INFO     | sum of deviations: 22497148676.000008
[2025-02-20 19:10:08] 2025-02-20 18:09:55,038 | INFO     | mean x: 1740064458.5
[2025-02-20 19:10:08] 2025-02-20 18:09:55,038 | INFO     | mean y: 2360653.520231214
[2025-02-20 19:10:08] 2025-02-20 18:09:55,038 | INFO     | -- intersect: -3045462207.51093
[2025-02-20 19:10:08] 2025-02-20 18:09:55,039 | INFO     | intersect: -3045462207.51093
[2025-02-20 19:10:08] 2025-02-20 18:09:55,039 | INFO     | chi2: 0.9057786996101882
[2025-02-20 19:10:08] 2025-02-20 18:09:55,039 | INFO     | current chi2=0.9057786996101882 (change=62.69147859208143 %)
[2025-02-20 19:10:08] 2025-02-20 18:09:55,040 | INFO     | model: linear, x: [1740054241.0, 1740054302.0, 1740054363.0, 1740054424.0, 1740054485.0, 1740054546.0, 1740054607.0, 1740054668.0, 1740054729.0, 1740054790.0, 1740
[2025-02-20 19:10:08] 2025-02-20 18:09:55,040 | INFO     | sum of square deviations: 12295263090.0
[2025-02-20 19:10:08] 2025-02-20 18:09:55,043 | INFO     | sum of deviations: 7018214273.0
[2025-02-20 19:10:08] 2025-02-20 18:09:55,043 | INFO     | mean x: 1740064611.0
[2025-02-20 19:10:08] 2025-02-20 18:09:55,043 | INFO     | mean y: 2364932.2580645164
[2025-02-20 19:10:08] 2025-02-20 18:09:55,043 | INFO     | -- intersect: -990875000.834119
[2025-02-20 19:10:08] 2025-02-20 18:09:55,043 | INFO     | intersect: -990875000.834119
[2025-02-20 19:10:08] 2025-02-20 18:09:55,044 | INFO     | chi2: 0.8033956155460391
[2025-02-20 19:10:08] 2025-02-20 18:09:55,044 | INFO     | current chi2=0.8033956155460391 (change=11.303322114795895 %)
[2025-02-20 19:10:08] 2025-02-20 18:09:55,044 | INFO     | left removable region: 30
[2025-02-20 19:10:08] 2025-02-20 18:09:55,044 | INFO     | model: linear, x: [1740055156.0, 1740055217.0, 1740055278.0, 1740055339.0, 1740055400.0, 1740055461.0, 1740055522.0, 1740055583.0, 1740055644.0, 1740055705.0, 1740
[2025-02-20 19:10:08] 2025-02-20 18:09:55,045 | INFO     | sum of square deviations: 10160711440.0
[2025-02-20 19:10:08] 2025-02-20 18:09:55,047 | INFO     | sum of deviations: 20175019677.5
[2025-02-20 19:10:08] 2025-02-20 18:09:55,048 | INFO     | mean x: 1740064885.5
[2025-02-20 19:10:08] 2025-02-20 18:09:55,048 | INFO     | mean y: 2373271.015625
[2025-02-20 19:10:08] 2025-02-20 18:09:55,048 | INFO     | -- intersect: -3452684331.2391715
[2025-02-20 19:10:08] 2025-02-20 18:09:55,048 | INFO     | intersect: -3452684331.2391715
[2025-02-20 19:10:08] 2025-02-20 18:09:55,048 | INFO     | chi2: 0.001516963001514633
[2025-02-20 19:10:08] 2025-02-20 18:09:55,048 | INFO     | -- intersect: -3452684331.2391715
[2025-02-20 19:10:08] 2025-02-20 18:09:55,049 | INFO     | current memory leak: 1.99 B/s (using 320 data points, chi2=0.00)
[2025-02-20 19:10:08] 2025-02-20 18:09:55,050 | INFO     | ..............................
[2025-02-20 19:10:08] 2025-02-20 18:09:55,050 | INFO     | . Timing measurements:
[2025-02-20 19:10:08] 2025-02-20 18:09:55,050 | INFO     | . get job = 0 s
[2025-02-20 19:10:08] 2025-02-20 18:09:55,050 | INFO     | . initial setup = 1 s
[2025-02-20 19:10:08] 2025-02-20 18:09:55,050 | INFO     | . payload setup = 8 s
[2025-02-20 19:10:08] 2025-02-20 18:09:55,050 | INFO     | . stage-in = 0 s
[2025-02-20 19:10:08] 2025-02-20 18:09:55,050 | INFO     | . payload execution = 21664 s
[2025-02-20 19:10:08] 2025-02-20 18:09:55,050 | INFO     | . stage-out = 1 s
[2025-02-20 19:10:08] 2025-02-20 18:09:55,050 | INFO     | . log creation = 0 s
[2025-02-20 19:10:08] 2025-02-20 18:09:55,050 | INFO     | ..............................
[2025-02-20 19:10:08] 2025-02-20 18:09:55,153 | INFO     | 
[2025-02-20 19:10:08] 2025-02-20 18:09:55,153 | INFO     | job summary report
[2025-02-20 19:10:08] 2025-02-20 18:09:55,153 | INFO     | --------------------------------------------------
[2025-02-20 19:10:08] 2025-02-20 18:09:55,153 | INFO     | PanDA job id: 6518558524
[2025-02-20 19:10:08] 2025-02-20 18:09:55,153 | INFO     | task id: 43205075
[2025-02-20 19:10:08] 2025-02-20 18:09:55,154 | INFO     | errors: (none)
[2025-02-20 19:10:08] 2025-02-20 18:09:55,154 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-20 19:10:08] 2025-02-20 18:09:55,154 | INFO     | pilot state: finished 
[2025-02-20 19:10:08] 2025-02-20 18:09:55,154 | INFO     | transexitcode: 0
[2025-02-20 19:10:08] 2025-02-20 18:09:55,154 | INFO     | exeerrorcode: 0
[2025-02-20 19:10:08] 2025-02-20 18:09:55,154 | INFO     | exeerrordiag: 
[2025-02-20 19:10:08] 2025-02-20 18:09:55,154 | INFO     | exitcode: 0
[2025-02-20 19:10:08] 2025-02-20 18:09:55,154 | INFO     | exitmsg: OK
[2025-02-20 19:10:08] 2025-02-20 18:09:55,154 | INFO     | cpuconsumptiontime: 83589 s
[2025-02-20 19:10:08] 2025-02-20 18:09:55,154 | INFO     | nevents: 400
[2025-02-20 19:10:08] 2025-02-20 18:09:55,154 | INFO     | neventsw: 0
[2025-02-20 19:10:08] 2025-02-20 18:09:55,155 | INFO     | pid: 215606
[2025-02-20 19:10:08] 2025-02-20 18:09:55,155 | INFO     | pgrp: 215606
[2025-02-20 19:10:08] 2025-02-20 18:09:55,155 | INFO     | corecount: 4
[2025-02-20 19:10:08] 2025-02-20 18:09:55,155 | INFO     | event service: False
[2025-02-20 19:10:08] 2025-02-20 18:09:55,155 | INFO     | sizes: {0: 2389384, 7: 2389590, 11: 2389618, 21677: 2422963, 21678: 2431926, 21679: 2431982, 21685: 2432280}
[2025-02-20 19:10:08] 2025-02-20 18:09:55,155 | INFO     | --------------------------------------------------
[2025-02-20 19:10:08] 2025-02-20 18:09:55,155 | INFO     | 
[2025-02-20 19:10:08] 2025-02-20 18:09:55,155 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-02-20 19:10:08] 2025-02-20 18:09:55,185 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-20 19:10:08] 2025-02-20 18:09:55,186 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-20 19:10:08] 2025-02-20 18:09:55,186 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-20 19:10:08] 2025-02-20 18:09:55,186 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-20 19:10:08] 2025-02-20 18:09:55,186 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-20 19:10:08] 2025-02-20 18:09:55,186 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-20 19:10:08] 2025-02-20 18:09:55,186 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-20 19:10:08] 2025-02-20 18:09:55,186 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-20 19:10:08] 2025-02-20 18:09:55,187 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-20 19:10:08] 2025-02-20 18:09:55,187 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-20 19:10:08] 2025-02-20 18:09:55,187 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-20 19:10:08] 2025-02-20 18:09:55,187 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-20 19:10:08] 2025-02-20 18:09:55,187 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-20 19:10:08] 2025-02-20 18:09:55,187 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-20 19:10:08] 2025-02-20 18:09:55,187 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-20 19:10:08] 2025-02-20 18:09:55,187 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-20 19:10:08] 2025-02-20 18:09:55,187 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-20 19:10:08] 2025-02-20 18:09:55,187 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-20 19:10:08] 2025-02-20 18:09:55,187 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-20 19:10:08] 2025-02-20 18:09:55,188 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-20 19:10:08] 2025-02-20 18:09:55,188 | INFO     | job 6518558524 has completed (purged errors)
[2025-02-20 19:10:08] 2025-02-20 18:09:55,188 | INFO     | overall cleanup function is called
[2025-02-20 19:10:08] 2025-02-20 18:09:56,197 | INFO     | --- collectZombieJob: --- 10, [215606]
[2025-02-20 19:10:08] 2025-02-20 18:09:56,198 | INFO     | zombie collector waiting for pid 215606
[2025-02-20 19:10:08] 2025-02-20 18:09:56,198 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-20 19:10:08] 2025-02-20 18:09:56,198 | INFO     | collected zombie processes
[2025-02-20 19:10:08] 2025-02-20 18:09:56,198 | INFO     | will attempt to kill all subprocesses of pid=215606
[2025-02-20 19:10:08] 2025-02-20 18:09:56,552 | INFO     | process IDs to be killed: [215606] (in reverse order)
[2025-02-20 19:10:08] 2025-02-20 18:09:56,861 | WARNING  | found no corresponding commands to process id(s)
[2025-02-20 19:10:08] 2025-02-20 18:09:56,861 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-20 19:10:08] 2025-02-20 18:09:56,887 | INFO     | did not find any defunct processes belonging to 215606
[2025-02-20 19:10:08] 2025-02-20 18:09:56,908 | INFO     | did not find any defunct processes belonging to 215606
[2025-02-20 19:10:08] 2025-02-20 18:09:56,909 | INFO     | ready for new job
[2025-02-20 19:10:08] 2025-02-20 18:09:56,909 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-20 19:10:08] 2025-02-20 18:09:56,912 | INFO     | **************************************
[2025-02-20 19:10:08] 2025-02-20 18:09:56,912 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-20 19:10:08] 2025-02-20 18:09:56,912 | INFO     | **************************************
[2025-02-20 19:10:08] 2025-02-20 18:09:56,912 | INFO     | 
[2025-02-20 19:10:08] 2025-02-20 18:09:56,921 | INFO     | architecture information:
[2025-02-20 19:10:08] 2025-02-20 18:09:56,922 | INFO     | executing command: cat /etc/os-release
[2025-02-20 19:10:08] 2025-02-20 18:09:56,950 | INFO     | cat /etc/os-release:
[2025-02-20 19:10:08] NAME="CentOS Linux"
[2025-02-20 19:10:08] VERSION="7 (Core)"
[2025-02-20 19:10:08] ID="centos"
[2025-02-20 19:10:08] ID_LIKE="rhel fedora"
[2025-02-20 19:10:08] VERSION_ID="7"
[2025-02-20 19:10:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-20 19:10:08] ANSI_COLOR="0;31"
[2025-02-20 19:10:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-20 19:10:08] HOME_URL="https://www.centos.org/"
[2025-02-20 19:10:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-20 19:10:08] 
[2025-02-20 19:10:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-20 19:10:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-20 19:10:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-20 19:10:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-20 19:10:08] 
[2025-02-20 19:10:08] 2025-02-20 18:09:56,950 | INFO     | **************************************
[2025-02-20 19:10:08] 2025-02-20 18:09:57,453 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-02-20 19:10:08] 2025-02-20 18:09:57,480 | INFO     | sufficient remaining disk space (3261494984704 B)
[2025-02-20 19:10:08] 2025-02-20 18:09:57,480 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-20 19:10:08] 2025-02-20 18:09:57,480 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-20 19:10:08] 2025-02-20 18:09:57,480 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-20 19:10:08] 2025-02-20 18:09:57,480 | INFO     | aborting loop
[2025-02-20 19:10:08] 2025-02-20 18:09:57,531 | INFO     | all data control threads have been joined
[2025-02-20 19:10:08] 2025-02-20 18:09:57,684 | INFO     | all payload control threads have been joined
[2025-02-20 19:10:08] 2025-02-20 18:09:57,989 | INFO     | found 0 job(s) in 20 queues
[2025-02-20 19:10:08] 2025-02-20 18:09:57,990 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-20 19:10:08] 2025-02-20 18:09:57,990 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-20 19:10:08] 2025-02-20 18:09:58,485 | INFO     | [job] retrieve thread has finished
[2025-02-20 19:10:08] 2025-02-20 18:09:58,486 | INFO     | [job] job monitor thread has finished
[2025-02-20 19:10:08] 2025-02-20 18:09:58,533 | INFO     | [payload] failed_post thread has finished
[2025-02-20 19:10:08] 2025-02-20 18:09:58,537 | INFO     | [data] control thread has finished
[2025-02-20 19:10:08] 2025-02-20 18:09:58,689 | INFO     | [payload] control thread has finished
[2025-02-20 19:10:08] 2025-02-20 18:09:58,755 | INFO     | [data] copytool_in thread has finished
[2025-02-20 19:10:08] 2025-02-20 18:09:58,781 | INFO     | all job control threads have been joined
[2025-02-20 19:10:08] 2025-02-20 18:09:58,872 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-20 19:10:08] 2025-02-20 18:09:58,919 | INFO     | [payload] validate_pre thread has finished
[2025-02-20 19:10:08] 2025-02-20 18:09:58,948 | INFO     | [job] create_data_payload thread has finished
[2025-02-20 19:10:08] 2025-02-20 18:09:59,073 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-20 19:10:08] 2025-02-20 18:09:59,209 | INFO     | [payload] validate_post thread has finished
[2025-02-20 19:10:08] 2025-02-20 18:09:59,598 | INFO     | [job] validate thread has finished
[2025-02-20 19:10:08] 2025-02-20 18:09:59,786 | INFO     | [job] control thread has finished
[2025-02-20 19:10:08] 2025-02-20 18:09:59,907 | INFO     | [payload] execute_payloads thread has finished
[2025-02-20 19:10:08] 2025-02-20 18:09:59,972 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-20 19:10:08] 2025-02-20 18:10:00,159 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-20 19:10:08] 2025-02-20 18:10:00,877 | INFO     | [data] copytool_out thread has finished
[2025-02-20 19:10:08] 2025-02-20 18:10:01,164 | INFO     | [job] queue monitor thread has finished
[2025-02-20 19:10:08] 2025-02-20 18:10:03,079 | INFO     | [data] queue_monitor thread has finished
[2025-02-20 19:10:08] 2025-02-20 18:10:03,162 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22360727906112)>', '<ExcThread(monitor, started 22360495195904)>']
[2025-02-20 19:10:08] 2025-02-20 18:10:04,019 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-20 19:10:08] 2025-02-20 18:10:04,019 | INFO     | [monitor] control thread has ended
[2025-02-20 19:10:08] 2025-02-20 18:10:08,187 | INFO     | all workflow threads have been joined
[2025-02-20 19:10:08] 2025-02-20 18:10:08,188 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-20 19:10:08] 2025-02-20 18:10:08,188 | INFO     | traces error code: 0
[2025-02-20 19:10:08] 2025-02-20 18:10:08,188 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-20 19:10:08] 2025-02-20 18:10:08,345 [wrapper] ==== pilot stdout END ====
[2025-02-20 19:10:08] 2025-02-20 18:10:08,349 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-20 19:10:08] 2025-02-20 18:10:08,353 [wrapper] pilotpid: 208139
[2025-02-20 19:10:08] 2025-02-20 18:10:08,357 [wrapper] Pilot exit status: 0
[2025-02-20 19:10:08] 2025-02-20 18:10:08,372 [wrapper] pandaids: 6518558524
[2025-02-20 19:10:08] 2025-02-20 18:10:08,521 [wrapper] cleanup supervisor_pilot 1721379 208140
[2025-02-20 19:10:08] 2025-02-20 18:10:08,528 [wrapper] Test setup, not cleaning
[2025-02-20 19:10:08] 2025-02-20 18:10:08,536 [wrapper] apfmon messages muted
[2025-02-20 19:10:08] 2025-02-20 18:10:08,539 [wrapper] ==== wrapper stdout END ====
[2025-02-20 19:10:08] 2025-02-20 18:10:08,543 [wrapper] ==== wrapper stderr END ====
[2025-02-20 19:10:08]  *** Error codes and diagnostics ***
[2025-02-20 19:10:08]     "exeErrorCode": 0,
[2025-02-20 19:10:08]     "exeErrorDiag": "",
[2025-02-20 19:10:08]     "pilotErrorCode": 0,
[2025-02-20 19:10:08]     "pilotErrorDiag": "",
[2025-02-20 19:10:08]  *** Listing of results directory ***
[2025-02-20 19:10:08] total 660872
[2025-02-20 19:10:08] -rw-r--r-- 1 boinc boinc    491065 Feb 19 01:26 pilot3.tar.gz
[2025-02-20 19:10:08] -rw-r--r-- 1 boinc boinc      5118 Feb 19 02:05 queuedata.json
[2025-02-20 19:10:08] -rwx------ 1 boinc boinc     35865 Feb 19 02:06 runpilot2-wrapper.sh
[2025-02-20 19:10:08] -rw-r--r-- 1 boinc boinc       100 Feb 20 13:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-20 19:10:08] -rwxr-xr-x 1 boinc boinc      7986 Feb 20 13:07 run_atlas
[2025-02-20 19:10:08] -rw-r--r-- 1 boinc boinc       105 Feb 20 13:07 job.xml
[2025-02-20 19:10:08] -rw-r--r-- 2 boinc boinc 348562557 Feb 20 13:07 EVNT.43092757._001057.pool.root.1
[2025-02-20 19:10:08] -rw-r--r-- 1 boinc boinc      6677 Feb 20 13:07 init_data.xml
[2025-02-20 19:10:08] -rw-r--r-- 2 boinc boinc     17569 Feb 20 13:07 start_atlas.sh
[2025-02-20 19:10:08] drwxrwx--x 2 boinc boinc      4096 Feb 20 13:07 shared
[2025-02-20 19:10:08] -rw-r--r-- 2 boinc boinc    503551 Feb 20 13:07 input.tar.gz
[2025-02-20 19:10:08] -rw-r--r-- 1 boinc boinc         0 Feb 20 13:07 boinc_lockfile
[2025-02-20 19:10:08] -rw-r--r-- 1 boinc boinc      2555 Feb 20 13:07 pandaJob.out
[2025-02-20 19:10:08] -rw------- 1 boinc boinc       424 Feb 20 13:07 setup.sh.local
[2025-02-20 19:10:08] -rw------- 1 boinc boinc    987454 Feb 20 13:08 agis_schedconf.cvmfs.json
[2025-02-20 19:10:08] drwx------ 4 boinc boinc      4096 Feb 20 13:08 pilot3
[2025-02-20 19:10:08] -rw------- 1 boinc boinc 318906888 Feb 20 19:08 HITS.43205075._046840.pool.root.1
[2025-02-20 19:10:08] -rw-r--r-- 1 boinc boinc       531 Feb 20 19:08 boinc_task_state.xml
[2025-02-20 19:10:08] -rw------- 1 boinc boinc        95 Feb 20 19:09 pilot_heartbeat.json
[2025-02-20 19:10:08] -rw------- 1 boinc boinc      1029 Feb 20 19:09 memory_monitor_summary.json
[2025-02-20 19:10:08] -rw------- 1 boinc boinc   1586690 Feb 20 19:09 agis_ddmendpoints.agis.ALL.json
[2025-02-20 19:10:08] -rw------- 1 boinc boinc    415679 Feb 20 19:09 log.43205075._046840.job.log.tgz.1
[2025-02-20 19:10:08] -rw------- 1 boinc boinc      7700 Feb 20 19:09 heartbeat.json
[2025-02-20 19:10:08] -rw-r--r-- 1 boinc boinc      8192 Feb 20 19:09 boinc_mmap_file
[2025-02-20 19:10:08] -rw-r--r-- 1 boinc boinc        28 Feb 20 19:09 wrapper_checkpoint.txt
[2025-02-20 19:10:08] -rw------- 1 boinc boinc      4226 Feb 20 19:10 pilotlog.txt
[2025-02-20 19:10:08] -rw------- 1 boinc boinc   2306907 Feb 20 19:10 log.43205075._046840.job.log.1
[2025-02-20 19:10:08] -rw------- 1 boinc boinc       357 Feb 20 19:10 output.list
[2025-02-20 19:10:08] -rw-r--r-- 1 boinc boinc       620 Feb 20 19:10 runtime_log
[2025-02-20 19:10:08] -rw------- 1 boinc boinc   2744320 Feb 20 19:10 result.tar.gz
[2025-02-20 19:10:08] -rw-r--r-- 1 boinc boinc     11424 Feb 20 19:10 runtime_log.err
[2025-02-20 19:10:08] -rw------- 1 boinc boinc       666 Feb 20 19:10 TvSNDmVin46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmQGnKDmlNC64n.diag
[2025-02-20 19:10:08] -rw-r--r-- 1 boinc boinc     21259 Feb 20 19:10 stderr.txt
[2025-02-20 19:10:08] HITS file was successfully produced:
[2025-02-20 19:10:08] -rw------- 1 boinc boinc 318906888 Feb 20 19:08 shared/HITS.pool.root.1
[2025-02-20 19:10:08]  *** Contents of shared directory: ***
[2025-02-20 19:10:08] total 655032
[2025-02-20 19:10:08] -rw-r--r-- 2 boinc boinc 348562557 Feb 20 13:07 ATLAS.root_0
[2025-02-20 19:10:08] -rw-r--r-- 2 boinc boinc     17569 Feb 20 13:07 start_atlas.sh
[2025-02-20 19:10:08] -rw-r--r-- 2 boinc boinc    503551 Feb 20 13:07 input.tar.gz
[2025-02-20 19:10:08] -rw------- 1 boinc boinc 318906888 Feb 20 19:08 HITS.pool.root.1
[2025-02-20 19:10:08] -rw------- 1 boinc boinc   2744320 Feb 20 19:10 result.tar.gz
19:10:09 (201857): run_atlas exited; CPU time 83237.348444
19:10:09 (201857): called boinc_finish(0)

</stderr_txt>
]]>

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