Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:05:07 (2154372): wrapper (7.7.26015): starting
12:05:07 (2154372): wrapper: running run_atlas (--nthreads 4)
[2025-02-19 12:05:07] Arguments: --nthreads 4
[2025-02-19 12:05:07] Threads: 4
[2025-02-19 12:05:07] Checking for CVMFS
[2025-02-19 12:05:07] No cvmfs_config command found, will try listing directly
[2025-02-19 12:05:07] CVMFS is ok
[2025-02-19 12:05:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-19 12:05:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-19 12:05:07] Further information can be found at the LHC@home message board.
[2025-02-19 12:05:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-19 12:05:07] Checking for apptainer binary...
[2025-02-19 12:05:07] which: no apptainer in ((null))
[2025-02-19 12:05:07] apptainer is not installed, using version from CVMFS
[2025-02-19 12:05:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-19 12:05:08] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-02-19 12:05:08] apptainer works
[2025-02-19 12:05:08] Set ATHENA_PROC_NUMBER=4
[2025-02-19 12:05:08] Set ATHENA_CORE_NUMBER=4
[2025-02-19 12:05:08] Starting ATLAS job with PandaID=6518465950
[2025-02-19 12:05:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:13:44 (2553902): wrapper (7.7.26015): starting
15:13:44 (2553902): wrapper: running run_atlas (--nthreads 4)
[2025-02-19 15:13:44] Arguments: --nthreads 4
[2025-02-19 15:13:44] Threads: 4
[2025-02-19 15:13:44] This job has been restarted, cleaning up previous attempt
[2025-02-19 15:13:44] Checking for CVMFS
[2025-02-19 15:13:44] No cvmfs_config command found, will try listing directly
[2025-02-19 15:13:44] CVMFS is ok
[2025-02-19 15:13:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-19 15:13:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-19 15:13:44] Further information can be found at the LHC@home message board.
[2025-02-19 15:13:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-19 15:13:44] Checking for apptainer binary...
[2025-02-19 15:13:44] which: no apptainer in ((null))
[2025-02-19 15:13:44] apptainer is not installed, using version from CVMFS
[2025-02-19 15:13:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-19 15:13:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-02-19 15:13:44] apptainer works
[2025-02-19 15:13:44] Set ATHENA_PROC_NUMBER=4
[2025-02-19 15:13:44] Set ATHENA_CORE_NUMBER=4
[2025-02-19 15:13:44] Starting ATLAS job with PandaID=6518465950
[2025-02-19 15:13:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-19 21:40:06]  *** The last 200 lines of the pilot log: ***
[2025-02-19 21:40:06] 2025-02-19 20:39:46,310 | INFO     | intersect: -18875683488.343285
[2025-02-19 21:40:06] 2025-02-19 20:39:46,311 | INFO     | chi2: 4.242591424957975
[2025-02-19 21:40:06] 2025-02-19 20:39:46,311 | INFO     | model: linear, x: [1739974458.0, 1739974519.0, 1739974580.0, 1739974641.0, 1739974702.0, 1739974763.0, 1739974824.0, 1739974885.0, 1739974946.0, 1739975007.0, 1739
[2025-02-19 21:40:06] 2025-02-19 20:39:46,312 | INFO     | sum of square deviations: 16221466937.5
[2025-02-19 21:40:06] 2025-02-19 20:39:46,315 | INFO     | sum of deviations: 180540246126.00003
[2025-02-19 21:40:06] 2025-02-19 20:39:46,315 | INFO     | mean x: 1739985834.5
[2025-02-19 21:40:06] 2025-02-19 20:39:46,315 | INFO     | mean y: 2344826.893048128
[2025-02-19 21:40:06] 2025-02-19 20:39:46,316 | INFO     | -- intersect: -19363195418.433086
[2025-02-19 21:40:06] 2025-02-19 20:39:46,316 | INFO     | intersect: -19363195418.433086
[2025-02-19 21:40:06] 2025-02-19 20:39:46,316 | INFO     | chi2: 4.243309825250632
[2025-02-19 21:40:06] 2025-02-19 20:39:46,316 | INFO     | current chi2=4.243309825250632 (change=-0.01693305389794399 %)
[2025-02-19 21:40:06] 2025-02-19 20:39:46,316 | INFO     | right removable region: 373
[2025-02-19 21:40:06] 2025-02-19 20:39:46,317 | INFO     | model: linear, x: [1739974763.0, 1739974824.0, 1739974885.0, 1739974946.0, 1739975007.0, 1739975068.0, 1739975129.0, 1739975190.0, 1739975251.0, 1739975312.0, 1739
[2025-02-19 21:40:06] 2025-02-19 20:39:46,318 | INFO     | sum of square deviations: 16221466937.5
[2025-02-19 21:40:06] 2025-02-19 20:39:46,321 | INFO     | sum of deviations: 91228377430.99998
[2025-02-19 21:40:06] 2025-02-19 20:39:46,322 | INFO     | mean x: 1739986139.5
[2025-02-19 21:40:06] 2025-02-19 20:39:46,322 | INFO     | mean y: 2366659.8181818184
[2025-02-19 21:40:06] 2025-02-19 20:39:46,322 | INFO     | -- intersect: -9783191753.031406
[2025-02-19 21:40:06] 2025-02-19 20:39:46,322 | INFO     | intersect: -9783191753.031406
[2025-02-19 21:40:06] 2025-02-19 20:39:46,322 | INFO     | chi2: 1.6993962160735772
[2025-02-19 21:40:06] 2025-02-19 20:39:46,323 | INFO     | current chi2=1.6993962160735772 (change=59.94438196248392 %)
[2025-02-19 21:40:06] 2025-02-19 20:39:46,323 | INFO     | model: linear, x: [1739975068.0, 1739975129.0, 1739975190.0, 1739975251.0, 1739975312.0, 1739975373.0, 1739975434.0, 1739975495.0, 1739975556.0, 1739975617.0, 1739
[2025-02-19 21:40:06] 2025-02-19 20:39:46,323 | INFO     | sum of square deviations: 15579529320.0
[2025-02-19 21:40:06] 2025-02-19 20:39:46,327 | INFO     | sum of deviations: 16041822700.0
[2025-02-19 21:40:06] 2025-02-19 20:39:46,327 | INFO     | mean x: 1739986292.0
[2025-02-19 21:40:06] 2025-02-19 20:39:46,327 | INFO     | mean y: 2384522.0
[2025-02-19 21:40:06] 2025-02-19 20:39:46,327 | INFO     | -- intersect: -1789232607.3353572
[2025-02-19 21:40:06] 2025-02-19 20:39:46,327 | INFO     | intersect: -1789232607.3353572
[2025-02-19 21:40:06] 2025-02-19 20:39:46,328 | INFO     | chi2: 0.12832015083080595
[2025-02-19 21:40:06] 2025-02-19 20:39:46,328 | INFO     | current chi2=0.12832015083080595 (change=92.44907399362774 %)
[2025-02-19 21:40:06] 2025-02-19 20:39:46,328 | INFO     | model: linear, x: [1739975373.0, 1739975434.0, 1739975495.0, 1739975556.0, 1739975617.0, 1739975678.0, 1739975739.0, 1739975800.0, 1739975861.0, 1739975922.0, 1739
[2025-02-19 21:40:06] 2025-02-19 20:39:46,329 | INFO     | sum of square deviations: 14954754815.0
[2025-02-19 21:40:06] 2025-02-19 20:39:46,332 | INFO     | sum of deviations: -1076849774.9999986
[2025-02-19 21:40:06] 2025-02-19 20:39:46,332 | INFO     | mean x: 1739986444.5
[2025-02-19 21:40:06] 2025-02-19 20:39:46,332 | INFO     | mean y: 2388679.3791208793
[2025-02-19 21:40:06] 2025-02-19 20:39:46,332 | INFO     | -- intersect: 127680202.67333762
[2025-02-19 21:40:06] 2025-02-19 20:39:46,332 | INFO     | intersect: 127680202.67333762
[2025-02-19 21:40:06] 2025-02-19 20:39:46,333 | INFO     | chi2: 0.00925944625294138
[2025-02-19 21:40:06] 2025-02-19 20:39:46,333 | INFO     | current chi2=0.00925944625294138 (change=92.78410585321846 %)
[2025-02-19 21:40:06] 2025-02-19 20:39:46,334 | INFO     | model: linear, x: [1739975678.0, 1739975739.0, 1739975800.0, 1739975861.0, 1739975922.0, 1739975983.0, 1739976044.0, 1739976105.0, 1739976166.0, 1739976227.0, 1739
[2025-02-19 21:40:06] 2025-02-19 20:39:46,334 | INFO     | sum of square deviations: 14346910860.0
[2025-02-19 21:40:06] 2025-02-19 20:39:46,337 | INFO     | sum of deviations: -2663021367.9999976
[2025-02-19 21:40:06] 2025-02-19 20:39:46,338 | INFO     | mean x: 1739986597.0
[2025-02-19 21:40:06] 2025-02-19 20:39:46,338 | INFO     | mean y: 2389076.0947075207
[2025-02-19 21:40:06] 2025-02-19 20:39:46,338 | INFO     | -- intersect: 325359054.3053759
[2025-02-19 21:40:06] 2025-02-19 20:39:46,338 | INFO     | intersect: 325359054.3053759
[2025-02-19 21:40:06] 2025-02-19 20:39:46,338 | INFO     | chi2: 0.008337926005922284
[2025-02-19 21:40:06] 2025-02-19 20:39:46,338 | INFO     | current chi2=0.008337926005922284 (change=9.95221767960869 %)
[2025-02-19 21:40:06] 2025-02-19 20:39:46,339 | INFO     | left removable region: 40
[2025-02-19 21:40:06] 2025-02-19 20:39:46,339 | INFO     | model: linear, x: [1739976898.0, 1739976959.0, 1739977020.0, 1739977081.0, 1739977142.0, 1739977203.0, 1739977264.0, 1739977325.0, 1739977386.0, 1739977447.0, 1739
[2025-02-19 21:40:06] 2025-02-19 20:39:46,339 | INFO     | sum of square deviations: 11450045382.0
[2025-02-19 21:40:06] 2025-02-19 20:39:46,342 | INFO     | sum of deviations: 1034767582.9999998
[2025-02-19 21:40:06] 2025-02-19 20:39:46,342 | INFO     | mean x: 1739987024.0
[2025-02-19 21:40:06] 2025-02-19 20:39:46,342 | INFO     | mean y: 2387962.3093093093
[2025-02-19 21:40:06] 2025-02-19 20:39:46,342 | INFO     | -- intersect: -154858765.29810122
[2025-02-19 21:40:06] 2025-02-19 20:39:46,342 | INFO     | intersect: -154858765.29810122
[2025-02-19 21:40:06] 2025-02-19 20:39:46,343 | INFO     | chi2: 0.00625880190163667
[2025-02-19 21:40:06] 2025-02-19 20:39:46,343 | INFO     | -- intersect: -154858765.29810122
[2025-02-19 21:40:06] 2025-02-19 20:39:46,343 | INFO     | current memory leak: 0.09 B/s (using 333 data points, chi2=0.01)
[2025-02-19 21:40:06] 2025-02-19 20:39:46,344 | INFO     | ..............................
[2025-02-19 21:40:06] 2025-02-19 20:39:46,344 | INFO     | . Timing measurements:
[2025-02-19 21:40:06] 2025-02-19 20:39:46,344 | INFO     | . get job = 0 s
[2025-02-19 21:40:06] 2025-02-19 20:39:46,344 | INFO     | . initial setup = 1 s
[2025-02-19 21:40:06] 2025-02-19 20:39:46,344 | INFO     | . payload setup = 5 s
[2025-02-19 21:40:06] 2025-02-19 20:39:46,344 | INFO     | . stage-in = 0 s
[2025-02-19 21:40:06] 2025-02-19 20:39:46,344 | INFO     | . payload execution = 23119 s
[2025-02-19 21:40:06] 2025-02-19 20:39:46,344 | INFO     | . stage-out = 1 s
[2025-02-19 21:40:06] 2025-02-19 20:39:46,345 | INFO     | . log creation = 0 s
[2025-02-19 21:40:06] 2025-02-19 20:39:46,345 | INFO     | ..............................
[2025-02-19 21:40:06] 2025-02-19 20:39:46,446 | INFO     | 
[2025-02-19 21:40:06] 2025-02-19 20:39:46,446 | INFO     | job summary report
[2025-02-19 21:40:06] 2025-02-19 20:39:46,446 | INFO     | --------------------------------------------------
[2025-02-19 21:40:06] 2025-02-19 20:39:46,447 | INFO     | PanDA job id: 6518465950
[2025-02-19 21:40:06] 2025-02-19 20:39:46,447 | INFO     | task id: 43205075
[2025-02-19 21:40:06] 2025-02-19 20:39:46,447 | INFO     | errors: (none)
[2025-02-19 21:40:06] 2025-02-19 20:39:46,447 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-19 21:40:06] 2025-02-19 20:39:46,447 | INFO     | pilot state: finished 
[2025-02-19 21:40:06] 2025-02-19 20:39:46,447 | INFO     | transexitcode: 0
[2025-02-19 21:40:06] 2025-02-19 20:39:46,447 | INFO     | exeerrorcode: 0
[2025-02-19 21:40:06] 2025-02-19 20:39:46,447 | INFO     | exeerrordiag: 
[2025-02-19 21:40:06] 2025-02-19 20:39:46,447 | INFO     | exitcode: 0
[2025-02-19 21:40:06] 2025-02-19 20:39:46,447 | INFO     | exitmsg: OK
[2025-02-19 21:40:06] 2025-02-19 20:39:46,447 | INFO     | cpuconsumptiontime: 88760 s
[2025-02-19 21:40:06] 2025-02-19 20:39:46,447 | INFO     | nevents: 400
[2025-02-19 21:40:06] 2025-02-19 20:39:46,448 | INFO     | neventsw: 0
[2025-02-19 21:40:06] 2025-02-19 20:39:46,448 | INFO     | pid: 2564653
[2025-02-19 21:40:06] 2025-02-19 20:39:46,448 | INFO     | pgrp: 2564653
[2025-02-19 21:40:06] 2025-02-19 20:39:46,448 | INFO     | corecount: 4
[2025-02-19 21:40:06] 2025-02-19 20:39:46,448 | INFO     | event service: False
[2025-02-19 21:40:06] 2025-02-19 20:39:46,448 | INFO     | sizes: {0: 2400535, 1: 2401402, 5: 2401608, 12: 2401664, 23128: 2436227, 23131: 2445910, 23133: 2446094, 23139: 2446264}
[2025-02-19 21:40:06] 2025-02-19 20:39:46,448 | INFO     | --------------------------------------------------
[2025-02-19 21:40:06] 2025-02-19 20:39:46,448 | INFO     | 
[2025-02-19 21:40:06] 2025-02-19 20:39:46,448 | INFO     | executing command: ls -lF /scratch/boinc/var/slot12/slots/0
[2025-02-19 21:40:06] 2025-02-19 20:39:46,468 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-19 21:40:06] 2025-02-19 20:39:46,469 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-19 21:40:06] 2025-02-19 20:39:46,469 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-19 21:40:06] 2025-02-19 20:39:46,469 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-19 21:40:06] 2025-02-19 20:39:46,469 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-19 21:40:06] 2025-02-19 20:39:46,469 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-19 21:40:06] 2025-02-19 20:39:46,469 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-19 21:40:06] 2025-02-19 20:39:46,469 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-19 21:40:06] 2025-02-19 20:39:46,469 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-19 21:40:06] 2025-02-19 20:39:46,469 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-19 21:40:06] 2025-02-19 20:39:46,469 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-19 21:40:06] 2025-02-19 20:39:46,469 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-19 21:40:06] 2025-02-19 20:39:46,470 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-19 21:40:06] 2025-02-19 20:39:46,470 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-19 21:40:06] 2025-02-19 20:39:46,470 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-19 21:40:06] 2025-02-19 20:39:46,470 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-19 21:40:06] 2025-02-19 20:39:46,470 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-19 21:40:06] 2025-02-19 20:39:46,470 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-19 21:40:06] 2025-02-19 20:39:46,470 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-19 21:40:06] 2025-02-19 20:39:46,470 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-19 21:40:06] 2025-02-19 20:39:46,470 | INFO     | job 6518465950 has completed (purged errors)
[2025-02-19 21:40:06] 2025-02-19 20:39:46,470 | INFO     | overall cleanup function is called
[2025-02-19 21:40:06] 2025-02-19 20:39:47,478 | INFO     | --- collectZombieJob: --- 10, [2564653]
[2025-02-19 21:40:06] 2025-02-19 20:39:47,478 | INFO     | zombie collector waiting for pid 2564653
[2025-02-19 21:40:06] 2025-02-19 20:39:47,479 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-19 21:40:06] 2025-02-19 20:39:47,479 | INFO     | collected zombie processes
[2025-02-19 21:40:06] 2025-02-19 20:39:47,479 | INFO     | will attempt to kill all subprocesses of pid=2564653
[2025-02-19 21:40:06] 2025-02-19 20:39:47,610 | INFO     | process IDs to be killed: [2564653] (in reverse order)
[2025-02-19 21:40:06] 2025-02-19 20:39:47,710 | WARNING  | found no corresponding commands to process id(s)
[2025-02-19 21:40:06] 2025-02-19 20:39:47,710 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-19 21:40:06] 2025-02-19 20:39:47,720 | INFO     | did not find any defunct processes belonging to 2564653
[2025-02-19 21:40:06] 2025-02-19 20:39:47,729 | INFO     | did not find any defunct processes belonging to 2564653
[2025-02-19 21:40:06] 2025-02-19 20:39:47,729 | INFO     | ready for new job
[2025-02-19 21:40:06] 2025-02-19 20:39:47,729 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-19 21:40:06] 2025-02-19 20:39:47,732 | INFO     | **************************************
[2025-02-19 21:40:06] 2025-02-19 20:39:47,732 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-19 21:40:06] 2025-02-19 20:39:47,732 | INFO     | **************************************
[2025-02-19 21:40:06] 2025-02-19 20:39:47,732 | INFO     | 
[2025-02-19 21:40:06] 2025-02-19 20:39:47,736 | INFO     | architecture information:
[2025-02-19 21:40:06] 2025-02-19 20:39:47,736 | INFO     | executing command: cat /etc/os-release
[2025-02-19 21:40:06] 2025-02-19 20:39:47,750 | INFO     | cat /etc/os-release:
[2025-02-19 21:40:06] NAME="CentOS Linux"
[2025-02-19 21:40:06] VERSION="7 (Core)"
[2025-02-19 21:40:06] ID="centos"
[2025-02-19 21:40:06] ID_LIKE="rhel fedora"
[2025-02-19 21:40:06] VERSION_ID="7"
[2025-02-19 21:40:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-19 21:40:06] ANSI_COLOR="0;31"
[2025-02-19 21:40:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-19 21:40:06] HOME_URL="https://www.centos.org/"
[2025-02-19 21:40:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-19 21:40:06] 
[2025-02-19 21:40:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-19 21:40:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-19 21:40:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-19 21:40:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-19 21:40:06] 
[2025-02-19 21:40:06] 2025-02-19 20:39:47,751 | INFO     | **************************************
[2025-02-19 21:40:06] 2025-02-19 20:39:48,252 | INFO     | executing command: df -mP /scratch/boinc/var/slot12/slots/0
[2025-02-19 21:40:06] 2025-02-19 20:39:48,267 | INFO     | sufficient remaining disk space (666319716352 B)
[2025-02-19 21:40:06] 2025-02-19 20:39:48,267 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-19 21:40:06] 2025-02-19 20:39:48,267 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-19 21:40:06] 2025-02-19 20:39:48,268 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-19 21:40:06] 2025-02-19 20:39:48,466 | INFO     | all data control threads have been joined
[2025-02-19 21:40:06] 2025-02-19 20:39:48,654 | INFO     | all payload control threads have been joined
[2025-02-19 21:40:06] 2025-02-19 20:39:48,759 | INFO     | all job control threads have been joined
[2025-02-19 21:40:06] 2025-02-19 20:39:48,841 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-19 21:40:06] 2025-02-19 20:39:48,842 | INFO     | aborting loop
[2025-02-19 21:40:06] 2025-02-19 20:39:48,864 | INFO     | found 0 job(s) in 20 queues
[2025-02-19 21:40:06] 2025-02-19 20:39:48,865 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-19 21:40:06] 2025-02-19 20:39:48,865 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-19 21:40:06] 2025-02-19 20:39:49,129 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-19 21:40:06] 2025-02-19 20:39:49,272 | INFO     | [job] retrieve thread has finished
[2025-02-19 21:40:06] 2025-02-19 20:39:49,273 | INFO     | [job] queue monitor thread has finished
[2025-02-19 21:40:06] 2025-02-19 20:39:49,471 | INFO     | [data] control thread has finished
[2025-02-19 21:40:06] 2025-02-19 20:39:49,659 | INFO     | [payload] control thread has finished
[2025-02-19 21:40:06] 2025-02-19 20:39:49,760 | INFO     | [job] control thread has finished
[2025-02-19 21:40:06] 2025-02-19 20:39:49,847 | INFO     | [job] job monitor thread has finished
[2025-02-19 21:40:06] 2025-02-19 20:39:49,944 | INFO     | [payload] failed_post thread has finished
[2025-02-19 21:40:06] 2025-02-19 20:39:49,945 | INFO     | [payload] validate_post thread has finished
[2025-02-19 21:40:06] 2025-02-19 20:39:50,180 | INFO     | [payload] execute_payloads thread has finished
[2025-02-19 21:40:06] 2025-02-19 20:39:50,238 | INFO     | [job] validate thread has finished
[2025-02-19 21:40:06] 2025-02-19 20:39:50,270 | INFO     | [job] create_data_payload thread has finished
[2025-02-19 21:40:06] 2025-02-19 20:39:50,436 | INFO     | [data] copytool_in thread has finished
[2025-02-19 21:40:06] 2025-02-19 20:39:50,719 | INFO     | [payload] validate_pre thread has finished
[2025-02-19 21:40:06] 2025-02-19 20:39:51,135 | INFO     | [data] copytool_out thread has finished
[2025-02-19 21:40:06] 2025-02-19 20:39:51,333 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-19 21:40:06] 2025-02-19 20:39:55,339 | INFO     | [data] queue_monitor thread has finished
[2025-02-19 21:40:06] 2025-02-19 20:39:58,558 | INFO     | job.realtimelogging is not enabled
[2025-02-19 21:40:06] 2025-02-19 20:39:59,564 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-19 21:40:06] 2025-02-19 20:40:01,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22635287426880)>', '<ExcThread(monitor, started 22635056436992)>']
[2025-02-19 21:40:06] 2025-02-19 20:40:01,917 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-19 21:40:06] 2025-02-19 20:40:01,917 | INFO     | [monitor] control thread has ended
[2025-02-19 21:40:06] 2025-02-19 20:40:06,433 | INFO     | all workflow threads have been joined
[2025-02-19 21:40:06] 2025-02-19 20:40:06,434 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-19 21:40:06] 2025-02-19 20:40:06,434 | INFO     | traces error code: 0
[2025-02-19 21:40:06] 2025-02-19 20:40:06,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-19 21:40:06] 2025-02-19 20:40:06,605 [wrapper] ==== pilot stdout END ====
[2025-02-19 21:40:06] 2025-02-19 20:40:06,607 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-19 21:40:06] 2025-02-19 20:40:06,610 [wrapper] pilotpid: 2557619
[2025-02-19 21:40:06] 2025-02-19 20:40:06,612 [wrapper] Pilot exit status: 0
[2025-02-19 21:40:06] 2025-02-19 20:40:06,622 [wrapper] pandaids: 6518465950 6518465950
[2025-02-19 21:40:06] 2025-02-19 20:40:06,678 [wrapper] cleanup supervisor_pilot 3361727 2557620
[2025-02-19 21:40:06] 2025-02-19 20:40:06,681 [wrapper] Test setup, not cleaning
[2025-02-19 21:40:06] 2025-02-19 20:40:06,686 [wrapper] apfmon messages muted
[2025-02-19 21:40:06] 2025-02-19 20:40:06,689 [wrapper] ==== wrapper stdout END ====
[2025-02-19 21:40:06] 2025-02-19 20:40:06,691 [wrapper] ==== wrapper stderr END ====
[2025-02-19 21:40:06]  *** Error codes and diagnostics ***
[2025-02-19 21:40:06]     "exeErrorCode": 0,
[2025-02-19 21:40:06]     "exeErrorDiag": "",
[2025-02-19 21:40:06]     "pilotErrorCode": 0,
[2025-02-19 21:40:06]     "pilotErrorDiag": "",
[2025-02-19 21:40:06]  *** Listing of results directory ***
[2025-02-19 21:40:06] total 1001440
[2025-02-19 21:40:06] drwx------ 4 boinc boinc      4096 Dec 18 12:03 pilot3
[2025-02-19 21:40:06] -rw-r--r-- 1 boinc boinc    491065 Feb 18 20:18 pilot3.tar.gz
[2025-02-19 21:40:06] -rwx------ 1 boinc boinc     35865 Feb 18 21:00 runpilot2-wrapper.sh
[2025-02-19 21:40:06] -rw-r--r-- 1 boinc boinc      5118 Feb 18 21:00 queuedata.json
[2025-02-19 21:40:06] -rw-r--r-- 1 boinc boinc       100 Feb 19 12:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-19 21:40:06] -rwxr-xr-x 1 boinc boinc      7986 Feb 19 12:05 run_atlas
[2025-02-19 21:40:06] -rw-r--r-- 1 boinc boinc       105 Feb 19 12:05 job.xml
[2025-02-19 21:40:06] -rw-r--r-- 3 boinc boinc 340966828 Feb 19 12:05 EVNT.43092757._000667.pool.root.1
[2025-02-19 21:40:06] -rw-r--r-- 3 boinc boinc 340966828 Feb 19 12:05 ATLAS.root_0
[2025-02-19 21:40:06] -rw-r--r-- 2 boinc boinc     17569 Feb 19 12:05 start_atlas.sh
[2025-02-19 21:40:06] drwxrwx--x 2 boinc boinc      4096 Feb 19 12:05 shared
[2025-02-19 21:40:06] -rw-r--r-- 2 boinc boinc    503555 Feb 19 12:05 input.tar.gz
[2025-02-19 21:40:06] -rw-r--r-- 1 boinc boinc         0 Feb 19 12:05 boinc_lockfile
[2025-02-19 21:40:06] -rw-r--r-- 1 boinc boinc      2556 Feb 19 15:13 pandaJob.out
[2025-02-19 21:40:06] -rw------- 1 boinc boinc       424 Feb 19 15:13 setup.sh.local
[2025-02-19 21:40:06] -rw------- 1 boinc boinc    992636 Feb 19 15:13 agis_schedconf.cvmfs.json
[2025-02-19 21:40:06] -rw-r--r-- 1 boinc boinc      6643 Feb 19 17:06 init_data.xml
[2025-02-19 21:40:06] -rw------- 1 boinc boinc 333656031 Feb 19 21:38 HITS.43205075._045755.pool.root.1
[2025-02-19 21:40:06] -rw-r--r-- 1 boinc boinc       533 Feb 19 21:38 boinc_task_state.xml
[2025-02-19 21:40:06] -rw------- 1 boinc boinc        97 Feb 19 21:39 pilot_heartbeat.json
[2025-02-19 21:40:06] -rw------- 1 boinc boinc      1034 Feb 19 21:39 memory_monitor_summary.json
[2025-02-19 21:40:06] -rw------- 1 boinc boinc   1586690 Feb 19 21:39 agis_ddmendpoints.agis.ALL.json
[2025-02-19 21:40:06] -rw------- 1 boinc boinc    451646 Feb 19 21:39 log.43205075._045755.job.log.tgz.1
[2025-02-19 21:40:06] -rw------- 1 boinc boinc      7740 Feb 19 21:39 heartbeat.json
[2025-02-19 21:40:06] -rw-r--r-- 1 boinc boinc      8192 Feb 19 21:39 boinc_mmap_file
[2025-02-19 21:40:06] -rw-r--r-- 1 boinc boinc        29 Feb 19 21:39 wrapper_checkpoint.txt
[2025-02-19 21:40:06] -rw------- 1 boinc boinc      4297 Feb 19 21:40 pilotlog.txt
[2025-02-19 21:40:06] -rw------- 1 boinc boinc   2581530 Feb 19 21:40 log.43205075._045755.job.log.1
[2025-02-19 21:40:06] -rw------- 1 boinc boinc       357 Feb 19 21:40 output.list
[2025-02-19 21:40:06] -rw-r--r-- 1 boinc boinc       620 Feb 19 21:40 runtime_log
[2025-02-19 21:40:06] -rw------- 1 boinc boinc   3051520 Feb 19 21:40 result.tar.gz
[2025-02-19 21:40:06] -rw-r--r-- 1 boinc boinc     11501 Feb 19 21:40 runtime_log.err
[2025-02-19 21:40:06] -rw------- 1 boinc boinc       791 Feb 19 21:40 19MMDmSwi46n9Rq4apOajLDm4fhM0noT9bVoFjIUDmseZKDm5ROsrm.diag
[2025-02-19 21:40:06] -rw-r--r-- 1 boinc boinc     23224 Feb 19 21:40 stderr.txt
[2025-02-19 21:40:06] HITS file was successfully produced:
[2025-02-19 21:40:06] -rw------- 1 boinc boinc 333656031 Feb 19 21:38 shared/HITS.pool.root.1
[2025-02-19 21:40:06]  *** Contents of shared directory: ***
[2025-02-19 21:40:06] total 662312
[2025-02-19 21:40:06] -rw-r--r-- 3 boinc boinc 340966828 Feb 19 12:05 ATLAS.root_0
[2025-02-19 21:40:06] -rw-r--r-- 2 boinc boinc     17569 Feb 19 12:05 start_atlas.sh
[2025-02-19 21:40:06] -rw-r--r-- 2 boinc boinc    503555 Feb 19 12:05 input.tar.gz
[2025-02-19 21:40:06] -rw------- 1 boinc boinc 333656031 Feb 19 21:38 HITS.pool.root.1
[2025-02-19 21:40:06] -rw------- 1 boinc boinc   3051520 Feb 19 21:40 result.tar.gz
21:40:08 (2553902): run_atlas exited; CPU time 88802.415857
21:40:08 (2553902): called boinc_finish(0)

</stderr_txt>
]]>

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