Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:29:43 (2091955): wrapper (7.7.26015): starting
12:29:43 (2091955): wrapper: running run_atlas (--nthreads 4)
[2025-02-20 12:29:43] Arguments: --nthreads 4
[2025-02-20 12:29:43] Threads: 4
[2025-02-20 12:29:43] Checking for CVMFS
[2025-02-20 12:29:43] No cvmfs_config command found, will try listing directly
[2025-02-20 12:29:43] CVMFS is ok
[2025-02-20 12:29:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-20 12:29:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-20 12:29:43] Further information can be found at the LHC@home message board.
[2025-02-20 12:29:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-20 12:29:43] Checking for apptainer binary...
[2025-02-20 12:29:43] which: no apptainer in ((null))
[2025-02-20 12:29:43] apptainer is not installed, using version from CVMFS
[2025-02-20 12:29:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-20 12:29:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-02-20 12:29:44] apptainer works
[2025-02-20 12:29:44] Set ATHENA_PROC_NUMBER=4
[2025-02-20 12:29:44] Set ATHENA_CORE_NUMBER=4
[2025-02-20 12:29:44] Starting ATLAS job with PandaID=6518464230
[2025-02-20 12:29:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-20 18:44:11]  *** The last 200 lines of the pilot log: ***
[2025-02-20 18:44:11] 2025-02-20 17:43:58,740 | INFO     | sum of deviations: 97273437201.49995
[2025-02-20 18:44:11] 2025-02-20 17:43:58,740 | INFO     | mean x: 1740062226.5
[2025-02-20 18:44:11] 2025-02-20 17:43:58,740 | INFO     | mean y: 2345624.2907608696
[2025-02-20 18:44:11] 2025-02-20 17:43:58,740 | INFO     | -- intersect: -10950838000.893398
[2025-02-20 18:44:11] 2025-02-20 17:43:58,740 | INFO     | intersect: -10950838000.893398
[2025-02-20 18:44:11] 2025-02-20 17:43:58,741 | INFO     | chi2: 4.157893383849284
[2025-02-20 18:44:11] 2025-02-20 17:43:58,741 | INFO     | model: linear, x: [1740051033.0, 1740051094.0, 1740051155.0, 1740051216.0, 1740051277.0, 1740051338.0, 1740051399.0, 1740051460.0, 1740051521.0, 1740051582.0, 1740
[2025-02-20 18:44:11] 2025-02-20 17:43:58,742 | INFO     | sum of square deviations: 14831839022.0
[2025-02-20 18:44:11] 2025-02-20 17:43:58,745 | INFO     | sum of deviations: 118903762305.00002
[2025-02-20 18:44:11] 2025-02-20 17:43:58,745 | INFO     | mean x: 1740062074.0
[2025-02-20 18:44:11] 2025-02-20 17:43:58,745 | INFO     | mean y: 2350870.752066116
[2025-02-20 18:44:11] 2025-02-20 17:43:58,745 | INFO     | -- intersect: -13947364126.555256
[2025-02-20 18:44:11] 2025-02-20 17:43:58,745 | INFO     | intersect: -13947364126.555256
[2025-02-20 18:44:11] 2025-02-20 17:43:58,746 | INFO     | chi2: 3.408442074870858
[2025-02-20 18:44:11] 2025-02-20 17:43:58,746 | INFO     | current chi2=3.408442074870858 (change=18.02478418252758 %)
[2025-02-20 18:44:11] 2025-02-20 17:43:58,746 | INFO     | right removable region: 362
[2025-02-20 18:44:11] 2025-02-20 17:43:58,746 | INFO     | model: linear, x: [1740051338.0, 1740051399.0, 1740051460.0, 1740051521.0, 1740051582.0, 1740051643.0, 1740051704.0, 1740051765.0, 1740051826.0, 1740051887.0, 1740
[2025-02-20 18:44:11] 2025-02-20 17:43:58,746 | INFO     | sum of square deviations: 14831839022.0
[2025-02-20 18:44:11] 2025-02-20 17:43:58,750 | INFO     | sum of deviations: 16057237521.99997
[2025-02-20 18:44:11] 2025-02-20 17:43:58,750 | INFO     | mean x: 1740062379.0
[2025-02-20 18:44:11] 2025-02-20 17:43:58,750 | INFO     | mean y: 2365512.652892562
[2025-02-20 18:44:11] 2025-02-20 17:43:58,750 | INFO     | -- intersect: -1881459876.852426
[2025-02-20 18:44:11] 2025-02-20 17:43:58,750 | INFO     | intersect: -1881459876.852426
[2025-02-20 18:44:11] 2025-02-20 17:43:58,750 | INFO     | chi2: 1.9628574118790942
[2025-02-20 18:44:11] 2025-02-20 17:43:58,750 | INFO     | current chi2=1.9628574118790942 (change=52.79202156785644 %)
[2025-02-20 18:44:11] 2025-02-20 17:43:58,751 | INFO     | model: linear, x: [1740051643.0, 1740051704.0, 1740051765.0, 1740051826.0, 1740051887.0, 1740051948.0, 1740052009.0, 1740052070.0, 1740052131.0, 1740052192.0, 1740
[2025-02-20 18:44:11] 2025-02-20 17:43:58,752 | INFO     | sum of square deviations: 14227353269.5
[2025-02-20 18:44:11] 2025-02-20 17:43:58,755 | INFO     | sum of deviations: -43043994860.0
[2025-02-20 18:44:11] 2025-02-20 17:43:58,755 | INFO     | mean x: 1740062531.5
[2025-02-20 18:44:11] 2025-02-20 17:43:58,755 | INFO     | mean y: 2380423.407821229
[2025-02-20 18:44:11] 2025-02-20 17:43:58,755 | INFO     | -- intersect: 5266834130.516538
[2025-02-20 18:44:11] 2025-02-20 17:43:58,756 | INFO     | intersect: 5266834130.516538
[2025-02-20 18:44:11] 2025-02-20 17:43:58,756 | INFO     | chi2: 0.9123987100183597
[2025-02-20 18:44:11] 2025-02-20 17:43:58,756 | INFO     | current chi2=0.9123987100183597 (change=53.51681153727327 %)
[2025-02-20 18:44:11] 2025-02-20 17:43:58,756 | INFO     | model: linear, x: [1740051948.0, 1740052009.0, 1740052070.0, 1740052131.0, 1740052192.0, 1740052253.0, 1740052314.0, 1740052375.0, 1740052436.0, 1740052497.0, 1740
[2025-02-20 18:44:11] 2025-02-20 17:43:58,757 | INFO     | sum of square deviations: 13639518992.0
[2025-02-20 18:44:11] 2025-02-20 17:43:58,759 | INFO     | sum of deviations: -54011731908.0
[2025-02-20 18:44:11] 2025-02-20 17:43:58,760 | INFO     | mean x: 1740062684.0
[2025-02-20 18:44:11] 2025-02-20 17:43:58,760 | INFO     | mean y: 2383252.2719546743
[2025-02-20 18:44:11] 2025-02-20 17:43:58,760 | INFO     | -- intersect: 6892934102.814948
[2025-02-20 18:44:11] 2025-02-20 17:43:58,760 | INFO     | intersect: 6892934102.814948
[2025-02-20 18:44:11] 2025-02-20 17:43:58,761 | INFO     | chi2: 0.8435112813769933
[2025-02-20 18:44:11] 2025-02-20 17:43:58,761 | INFO     | current chi2=0.8435112813769933 (change=7.550145335034532 %)
[2025-02-20 18:44:11] 2025-02-20 17:43:58,761 | INFO     | left removable region: 30
[2025-02-20 18:44:11] 2025-02-20 17:43:58,762 | INFO     | model: linear, x: [1740052863.0, 1740052924.0, 1740052985.0, 1740053046.0, 1740053107.0, 1740053168.0, 1740053229.0, 1740053290.0, 1740053351.0, 1740053412.0, 1740
[2025-02-20 18:44:11] 2025-02-20 17:43:58,762 | INFO     | sum of square deviations: 11347200663.0
[2025-02-20 18:44:11] 2025-02-20 17:43:58,765 | INFO     | sum of deviations: -19870093670.500004
[2025-02-20 18:44:11] 2025-02-20 17:43:58,765 | INFO     | mean x: 1740062958.5
[2025-02-20 18:44:11] 2025-02-20 17:43:58,765 | INFO     | mean y: 2386024.8644578313
[2025-02-20 18:44:11] 2025-02-20 17:43:58,765 | INFO     | -- intersect: 3049411895.368565
[2025-02-20 18:44:11] 2025-02-20 17:43:58,765 | INFO     | intersect: 3049411895.368565
[2025-02-20 18:44:11] 2025-02-20 17:43:58,766 | INFO     | chi2: 0.05499675916635152
[2025-02-20 18:44:11] 2025-02-20 17:43:58,766 | INFO     | -- intersect: 3049411895.368565
[2025-02-20 18:44:11] 2025-02-20 17:43:58,766 | INFO     | current memory leak: -1.75 B/s (using 332 data points, chi2=0.05)
[2025-02-20 18:44:11] 2025-02-20 17:43:58,768 | INFO     | ..............................
[2025-02-20 18:44:11] 2025-02-20 17:43:58,768 | INFO     | . Timing measurements:
[2025-02-20 18:44:11] 2025-02-20 17:43:58,768 | INFO     | . get job = 0 s
[2025-02-20 18:44:11] 2025-02-20 17:43:58,768 | INFO     | . initial setup = 1 s
[2025-02-20 18:44:11] 2025-02-20 17:43:58,768 | INFO     | . payload setup = 8 s
[2025-02-20 18:44:11] 2025-02-20 17:43:58,768 | INFO     | . stage-in = 0 s
[2025-02-20 18:44:11] 2025-02-20 17:43:58,768 | INFO     | . payload execution = 22400 s
[2025-02-20 18:44:11] 2025-02-20 17:43:58,768 | INFO     | . stage-out = 1 s
[2025-02-20 18:44:11] 2025-02-20 17:43:58,768 | INFO     | . log creation = 0 s
[2025-02-20 18:44:11] 2025-02-20 17:43:58,768 | INFO     | ..............................
[2025-02-20 18:44:11] 2025-02-20 17:43:58,880 | INFO     | 
[2025-02-20 18:44:11] 2025-02-20 17:43:58,880 | INFO     | job summary report
[2025-02-20 18:44:11] 2025-02-20 17:43:58,880 | INFO     | --------------------------------------------------
[2025-02-20 18:44:11] 2025-02-20 17:43:58,880 | INFO     | PanDA job id: 6518464230
[2025-02-20 18:44:11] 2025-02-20 17:43:58,880 | INFO     | task id: 43205075
[2025-02-20 18:44:11] 2025-02-20 17:43:58,880 | INFO     | errors: (none)
[2025-02-20 18:44:11] 2025-02-20 17:43:58,880 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-20 18:44:11] 2025-02-20 17:43:58,880 | INFO     | pilot state: finished 
[2025-02-20 18:44:11] 2025-02-20 17:43:58,881 | INFO     | transexitcode: 0
[2025-02-20 18:44:11] 2025-02-20 17:43:58,881 | INFO     | exeerrorcode: 0
[2025-02-20 18:44:11] 2025-02-20 17:43:58,881 | INFO     | exeerrordiag: 
[2025-02-20 18:44:11] 2025-02-20 17:43:58,881 | INFO     | exitcode: 0
[2025-02-20 18:44:11] 2025-02-20 17:43:58,881 | INFO     | exitmsg: OK
[2025-02-20 18:44:11] 2025-02-20 17:43:58,881 | INFO     | cpuconsumptiontime: 84498 s
[2025-02-20 18:44:11] 2025-02-20 17:43:58,881 | INFO     | nevents: 400
[2025-02-20 18:44:11] 2025-02-20 17:43:58,881 | INFO     | neventsw: 0
[2025-02-20 18:44:11] 2025-02-20 17:43:58,881 | INFO     | pid: 2103897
[2025-02-20 18:44:11] 2025-02-20 17:43:58,881 | INFO     | pgrp: 2103897
[2025-02-20 18:44:11] 2025-02-20 17:43:58,881 | INFO     | corecount: 4
[2025-02-20 18:44:11] 2025-02-20 17:43:58,881 | INFO     | event service: False
[2025-02-20 18:44:11] 2025-02-20 17:43:58,882 | INFO     | sizes: {0: 2389387, 1: 2389387, 7: 2389621, 11: 2389649, 22413: 2423597, 22414: 2432560, 22415: 2432744, 22422: 2432914}
[2025-02-20 18:44:11] 2025-02-20 17:43:58,882 | INFO     | --------------------------------------------------
[2025-02-20 18:44:11] 2025-02-20 17:43:58,882 | INFO     | 
[2025-02-20 18:44:11] 2025-02-20 17:43:58,882 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-02-20 18:44:11] 2025-02-20 17:43:58,914 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-20 18:44:11] 2025-02-20 17:43:58,914 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-20 18:44:11] 2025-02-20 17:43:58,914 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-20 18:44:11] 2025-02-20 17:43:58,914 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-20 18:44:11] 2025-02-20 17:43:58,914 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-20 18:44:11] 2025-02-20 17:43:58,915 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-20 18:44:11] 2025-02-20 17:43:58,915 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-20 18:44:11] 2025-02-20 17:43:58,915 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-20 18:44:11] 2025-02-20 17:43:58,915 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-20 18:44:11] 2025-02-20 17:43:58,915 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-20 18:44:11] 2025-02-20 17:43:58,915 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-20 18:44:11] 2025-02-20 17:43:58,915 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-20 18:44:11] 2025-02-20 17:43:58,915 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-20 18:44:11] 2025-02-20 17:43:58,915 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-20 18:44:11] 2025-02-20 17:43:58,915 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-20 18:44:11] 2025-02-20 17:43:58,916 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-20 18:44:11] 2025-02-20 17:43:58,916 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-20 18:44:11] 2025-02-20 17:43:58,916 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-20 18:44:11] 2025-02-20 17:43:58,916 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-20 18:44:11] 2025-02-20 17:43:58,916 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-20 18:44:11] 2025-02-20 17:43:58,916 | INFO     | job 6518464230 has completed (purged errors)
[2025-02-20 18:44:11] 2025-02-20 17:43:58,916 | INFO     | overall cleanup function is called
[2025-02-20 18:44:11] 2025-02-20 17:43:59,060 | WARNING  | process 2103897 can no longer be monitored (due to stat problems) - aborting
[2025-02-20 18:44:11] 2025-02-20 17:43:59,600 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-02-20 18:44:11] 2025-02-20 17:43:59,926 | INFO     | --- collectZombieJob: --- 10, [2103897]
[2025-02-20 18:44:11] 2025-02-20 17:43:59,927 | INFO     | zombie collector waiting for pid 2103897
[2025-02-20 18:44:11] 2025-02-20 17:43:59,927 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-20 18:44:11] 2025-02-20 17:43:59,927 | INFO     | collected zombie processes
[2025-02-20 18:44:11] 2025-02-20 17:43:59,927 | INFO     | will attempt to kill all subprocesses of pid=2103897
[2025-02-20 18:44:11] 2025-02-20 17:43:59,931 | INFO     | number of running child processes to parent process 2103897: 1
[2025-02-20 18:44:11] 2025-02-20 17:43:59,932 | INFO     | maximum number of monitored processes: 6
[2025-02-20 18:44:11] 2025-02-20 17:43:59,932 | INFO     | aborting job monitoring since job object (job id=6518464230) has expired
[2025-02-20 18:44:11] 2025-02-20 17:44:00,264 | INFO     | process IDs to be killed: [2103897] (in reverse order)
[2025-02-20 18:44:11] 2025-02-20 17:44:00,538 | WARNING  | found no corresponding commands to process id(s)
[2025-02-20 18:44:11] 2025-02-20 17:44:00,539 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-20 18:44:11] 2025-02-20 17:44:00,563 | INFO     | did not find any defunct processes belonging to 2103897
[2025-02-20 18:44:11] 2025-02-20 17:44:00,584 | INFO     | did not find any defunct processes belonging to 2103897
[2025-02-20 18:44:11] 2025-02-20 17:44:00,585 | INFO     | ready for new job
[2025-02-20 18:44:11] 2025-02-20 17:44:00,585 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-20 18:44:11] 2025-02-20 17:44:00,589 | INFO     | **************************************
[2025-02-20 18:44:11] 2025-02-20 17:44:00,589 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-20 18:44:11] 2025-02-20 17:44:00,589 | INFO     | **************************************
[2025-02-20 18:44:11] 2025-02-20 17:44:00,589 | INFO     | 
[2025-02-20 18:44:11] 2025-02-20 17:44:00,598 | INFO     | architecture information:
[2025-02-20 18:44:11] 2025-02-20 17:44:00,598 | INFO     | executing command: cat /etc/os-release
[2025-02-20 18:44:11] 2025-02-20 17:44:00,625 | INFO     | cat /etc/os-release:
[2025-02-20 18:44:11] NAME="CentOS Linux"
[2025-02-20 18:44:11] VERSION="7 (Core)"
[2025-02-20 18:44:11] ID="centos"
[2025-02-20 18:44:11] ID_LIKE="rhel fedora"
[2025-02-20 18:44:11] VERSION_ID="7"
[2025-02-20 18:44:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-20 18:44:11] ANSI_COLOR="0;31"
[2025-02-20 18:44:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-20 18:44:11] HOME_URL="https://www.centos.org/"
[2025-02-20 18:44:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-20 18:44:11] 
[2025-02-20 18:44:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-20 18:44:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-20 18:44:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-20 18:44:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-20 18:44:11] 
[2025-02-20 18:44:11] 2025-02-20 17:44:00,625 | INFO     | **************************************
[2025-02-20 18:44:11] 2025-02-20 17:44:01,128 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-02-20 18:44:11] 2025-02-20 17:44:01,155 | INFO     | sufficient remaining disk space (3263058411520 B)
[2025-02-20 18:44:11] 2025-02-20 17:44:01,155 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-20 18:44:11] 2025-02-20 17:44:01,156 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-20 18:44:11] 2025-02-20 17:44:01,156 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-20 18:44:11] 2025-02-20 17:44:01,157 | INFO     | aborting loop
[2025-02-20 18:44:11] 2025-02-20 17:44:01,157 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-20 18:44:11] 2025-02-20 17:44:01,158 | INFO     | found 0 job(s) in 20 queues
[2025-02-20 18:44:11] 2025-02-20 17:44:01,158 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-20 18:44:11] 2025-02-20 17:44:01,158 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-20 18:44:11] 2025-02-20 17:44:01,257 | INFO     | all job control threads have been joined
[2025-02-20 18:44:11] 2025-02-20 17:44:01,355 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-20 18:44:11] 2025-02-20 17:44:01,814 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-20 18:44:11] 2025-02-20 17:44:01,870 | INFO     | all payload control threads have been joined
[2025-02-20 18:44:11] 2025-02-20 17:44:02,071 | INFO     | all data control threads have been joined
[2025-02-20 18:44:11] 2025-02-20 17:44:02,161 | INFO     | [job] retrieve thread has finished
[2025-02-20 18:44:11] 2025-02-20 17:44:02,162 | INFO     | [job] job monitor thread has finished
[2025-02-20 18:44:11] 2025-02-20 17:44:02,263 | INFO     | [job] control thread has finished
[2025-02-20 18:44:11] 2025-02-20 17:44:02,354 | INFO     | [payload] execute_payloads thread has finished
[2025-02-20 18:44:11] 2025-02-20 17:44:02,494 | INFO     | [payload] validate_pre thread has finished
[2025-02-20 18:44:11] 2025-02-20 17:44:02,637 | INFO     | [payload] failed_post thread has finished
[2025-02-20 18:44:11] 2025-02-20 17:44:02,844 | INFO     | [data] copytool_in thread has finished
[2025-02-20 18:44:11] 2025-02-20 17:44:02,875 | INFO     | [payload] control thread has finished
[2025-02-20 18:44:11] 2025-02-20 17:44:02,953 | INFO     | [job] validate thread has finished
[2025-02-20 18:44:11] 2025-02-20 17:44:02,985 | INFO     | [job] create_data_payload thread has finished
[2025-02-20 18:44:11] 2025-02-20 17:44:03,075 | INFO     | [data] control thread has finished
[2025-02-20 18:44:11] 2025-02-20 17:44:03,125 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-20 18:44:11] 2025-02-20 17:44:03,245 | INFO     | [payload] validate_post thread has finished
[2025-02-20 18:44:11] 2025-02-20 17:44:03,357 | INFO     | [data] copytool_out thread has finished
[2025-02-20 18:44:11] 2025-02-20 17:44:03,890 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-20 18:44:11] 2025-02-20 17:44:04,895 | INFO     | [job] queue monitor thread has finished
[2025-02-20 18:44:11] 2025-02-20 17:44:05,820 | INFO     | [data] queue_monitor thread has finished
[2025-02-20 18:44:11] 2025-02-20 17:44:06,289 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23418925578048)>', '<ExcThread(monitor, started 23418690828032)>']
[2025-02-20 18:44:11] 2025-02-20 17:44:07,189 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-20 18:44:11] 2025-02-20 17:44:07,189 | INFO     | [monitor] control thread has ended
[2025-02-20 18:44:11] 2025-02-20 17:44:11,314 | INFO     | all workflow threads have been joined
[2025-02-20 18:44:11] 2025-02-20 17:44:11,314 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-20 18:44:11] 2025-02-20 17:44:11,314 | INFO     | traces error code: 0
[2025-02-20 18:44:11] 2025-02-20 17:44:11,315 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-20 18:44:11] 2025-02-20 17:44:11,492 [wrapper] ==== pilot stdout END ====
[2025-02-20 18:44:11] 2025-02-20 17:44:11,496 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-20 18:44:11] 2025-02-20 17:44:11,501 [wrapper] pilotpid: 2095922
[2025-02-20 18:44:11] 2025-02-20 17:44:11,505 [wrapper] Pilot exit status: 0
[2025-02-20 18:44:11] 2025-02-20 17:44:11,520 [wrapper] pandaids: 6518464230
[2025-02-20 18:44:11] 2025-02-20 17:44:11,671 [wrapper] cleanup supervisor_pilot 3676668 2095923
[2025-02-20 18:44:11] 2025-02-20 17:44:11,676 [wrapper] Test setup, not cleaning
[2025-02-20 18:44:11] 2025-02-20 17:44:11,684 [wrapper] apfmon messages muted
[2025-02-20 18:44:11] 2025-02-20 17:44:11,688 [wrapper] ==== wrapper stdout END ====
[2025-02-20 18:44:11] 2025-02-20 17:44:11,691 [wrapper] ==== wrapper stderr END ====
[2025-02-20 18:44:11]  *** Error codes and diagnostics ***
[2025-02-20 18:44:11]     "exeErrorCode": 0,
[2025-02-20 18:44:11]     "exeErrorDiag": "",
[2025-02-20 18:44:11]     "pilotErrorCode": 0,
[2025-02-20 18:44:11]     "pilotErrorDiag": "",
[2025-02-20 18:44:11]  *** Listing of results directory ***
[2025-02-20 18:44:11] total 663260
[2025-02-20 18:44:11] -rw-r--r-- 1 boinc boinc    491065 Feb 18 20:18 pilot3.tar.gz
[2025-02-20 18:44:11] -rw-r--r-- 1 boinc boinc      5118 Feb 18 20:24 queuedata.json
[2025-02-20 18:44:11] -rwx------ 1 boinc boinc     35865 Feb 18 20:25 runpilot2-wrapper.sh
[2025-02-20 18:44:11] -rw-r--r-- 1 boinc boinc       100 Feb 20 12:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-20 18:44:11] -rwxr-xr-x 1 boinc boinc      7986 Feb 20 12:29 run_atlas
[2025-02-20 18:44:11] -rw-r--r-- 1 boinc boinc       105 Feb 20 12:29 job.xml
[2025-02-20 18:44:11] -rw-r--r-- 2 boinc boinc 344558102 Feb 20 12:29 EVNT.43092757._000640.pool.root.1
[2025-02-20 18:44:11] -rw-r--r-- 1 boinc boinc      6677 Feb 20 12:29 init_data.xml
[2025-02-20 18:44:11] -rw-r--r-- 2 boinc boinc     17569 Feb 20 12:29 start_atlas.sh
[2025-02-20 18:44:11] drwxrwx--x 2 boinc boinc      4096 Feb 20 12:29 shared
[2025-02-20 18:44:11] -rw-r--r-- 2 boinc boinc    503560 Feb 20 12:29 input.tar.gz
[2025-02-20 18:44:11] -rw-r--r-- 1 boinc boinc         0 Feb 20 12:29 boinc_lockfile
[2025-02-20 18:44:11] -rw-r--r-- 1 boinc boinc      2556 Feb 20 12:29 pandaJob.out
[2025-02-20 18:44:11] -rw------- 1 boinc boinc       424 Feb 20 12:29 setup.sh.local
[2025-02-20 18:44:11] -rw------- 1 boinc boinc    987454 Feb 20 12:29 agis_schedconf.cvmfs.json
[2025-02-20 18:44:11] drwx------ 4 boinc boinc      4096 Feb 20 12:29 pilot3
[2025-02-20 18:44:11] -rw------- 1 boinc boinc 325010929 Feb 20 18:43 HITS.43205075._045440.pool.root.1
[2025-02-20 18:44:11] -rw------- 1 boinc boinc        95 Feb 20 18:43 pilot_heartbeat.json
[2025-02-20 18:44:11] -rw-r--r-- 1 boinc boinc       532 Feb 20 18:43 boinc_task_state.xml
[2025-02-20 18:44:11] -rw------- 1 boinc boinc      1029 Feb 20 18:43 memory_monitor_summary.json
[2025-02-20 18:44:11] -rw------- 1 boinc boinc   1586690 Feb 20 18:43 agis_ddmendpoints.agis.ALL.json
[2025-02-20 18:44:11] -rw------- 1 boinc boinc    457681 Feb 20 18:43 log.43205075._045440.job.log.tgz.1
[2025-02-20 18:44:11] -rw------- 1 boinc boinc      7692 Feb 20 18:43 heartbeat.json
[2025-02-20 18:44:11] -rw-r--r-- 1 boinc boinc      8192 Feb 20 18:44 boinc_mmap_file
[2025-02-20 18:44:11] -rw-r--r-- 1 boinc boinc        28 Feb 20 18:44 wrapper_checkpoint.txt
[2025-02-20 18:44:11] -rw------- 1 boinc boinc      4349 Feb 20 18:44 pilotlog.txt
[2025-02-20 18:44:11] -rw------- 1 boinc boinc   2441157 Feb 20 18:44 log.43205075._045440.job.log.1
[2025-02-20 18:44:11] -rw------- 1 boinc boinc       357 Feb 20 18:44 output.list
[2025-02-20 18:44:11] -rw-r--r-- 1 boinc boinc       620 Feb 20 18:44 runtime_log
[2025-02-20 18:44:11] -rw------- 1 boinc boinc   2918400 Feb 20 18:44 result.tar.gz
[2025-02-20 18:44:11] -rw-r--r-- 1 boinc boinc     11424 Feb 20 18:44 runtime_log.err
[2025-02-20 18:44:11] -rw------- 1 boinc boinc       666 Feb 20 18:44 YfNKDmnOi46nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm0lmKDmekALxm.diag
[2025-02-20 18:44:11] -rw-r--r-- 1 boinc boinc     21369 Feb 20 18:44 stderr.txt
[2025-02-20 18:44:11] HITS file was successfully produced:
[2025-02-20 18:44:11] -rw------- 1 boinc boinc 325010929 Feb 20 18:43 shared/HITS.pool.root.1
[2025-02-20 18:44:11]  *** Contents of shared directory: ***
[2025-02-20 18:44:11] total 657252
[2025-02-20 18:44:11] -rw-r--r-- 2 boinc boinc 344558102 Feb 20 12:29 ATLAS.root_0
[2025-02-20 18:44:11] -rw-r--r-- 2 boinc boinc     17569 Feb 20 12:29 start_atlas.sh
[2025-02-20 18:44:11] -rw-r--r-- 2 boinc boinc    503560 Feb 20 12:29 input.tar.gz
[2025-02-20 18:44:11] -rw------- 1 boinc boinc 325010929 Feb 20 18:43 HITS.pool.root.1
[2025-02-20 18:44:11] -rw------- 1 boinc boinc   2918400 Feb 20 18:44 result.tar.gz
18:44:12 (2091955): run_atlas exited; CPU time 84110.949372
18:44:12 (2091955): called boinc_finish(0)

</stderr_txt>
]]>

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