Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:45:44 (3369584): wrapper (7.7.26015): starting
06:45:44 (3369584): wrapper: running run_atlas (--nthreads 4)
[2025-02-20 06:45:44] Arguments: --nthreads 4
[2025-02-20 06:45:44] Threads: 4
[2025-02-20 06:45:44] Checking for CVMFS
[2025-02-20 06:45:44] No cvmfs_config command found, will try listing directly
[2025-02-20 06:45:44] CVMFS is ok
[2025-02-20 06:45:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-20 06:45:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-20 06:45:44] Further information can be found at the LHC@home message board.
[2025-02-20 06:45:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-20 06:45:44] Checking for apptainer binary...
[2025-02-20 06:45:44] which: no apptainer in ((null))
[2025-02-20 06:45:44] apptainer is not installed, using version from CVMFS
[2025-02-20 06:45:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-20 06:45:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2025-02-20 06:45:45] apptainer works
[2025-02-20 06:45:45] Set ATHENA_PROC_NUMBER=4
[2025-02-20 06:45:45] Set ATHENA_CORE_NUMBER=4
[2025-02-20 06:45:45] Starting ATLAS job with PandaID=6518211527
[2025-02-20 06:45:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-20 13:22:22]  *** The last 200 lines of the pilot log: ***
[2025-02-20 13:22:22] 2025-02-20 12:22:06,977 | INFO     | sum of square deviations: 18393712317.5
[2025-02-20 13:22:22] 2025-02-20 12:22:06,981 | INFO     | sum of deviations: 146184271731.00003
[2025-02-20 13:22:22] 2025-02-20 12:22:06,981 | INFO     | mean x: 1740042247.5
[2025-02-20 13:22:22] 2025-02-20 12:22:06,981 | INFO     | mean y: 2340563.523076923
[2025-02-20 13:22:22] 2025-02-20 12:22:06,981 | INFO     | -- intersect: -13826668194.537815
[2025-02-20 13:22:22] 2025-02-20 12:22:06,982 | INFO     | intersect: -13826668194.537815
[2025-02-20 13:22:22] 2025-02-20 12:22:06,982 | INFO     | chi2: 3.845697883068791
[2025-02-20 13:22:22] 2025-02-20 12:22:06,983 | INFO     | model: linear, x: [1740030383.0, 1740030444.0, 1740030505.0, 1740030566.0, 1740030627.0, 1740030688.0, 1740030749.0, 1740030810.0, 1740030871.0, 1740030932.0, 1740
[2025-02-20 13:22:22] 2025-02-20 12:22:06,984 | INFO     | sum of square deviations: 17695289920.0
[2025-02-20 13:22:22] 2025-02-20 12:22:06,988 | INFO     | sum of deviations: 169013021226.0
[2025-02-20 13:22:22] 2025-02-20 12:22:06,988 | INFO     | mean x: 1740042095.0
[2025-02-20 13:22:22] 2025-02-20 12:22:06,988 | INFO     | mean y: 2345491.7584415586
[2025-02-20 13:22:22] 2025-02-20 12:22:06,988 | INFO     | -- intersect: -16617318433.83654
[2025-02-20 13:22:22] 2025-02-20 12:22:06,988 | INFO     | intersect: -16617318433.83654
[2025-02-20 13:22:22] 2025-02-20 12:22:06,989 | INFO     | chi2: 3.061550173778255
[2025-02-20 13:22:22] 2025-02-20 12:22:06,989 | INFO     | current chi2=3.061550173778255 (change=20.390257714805244 %)
[2025-02-20 13:22:22] 2025-02-20 12:22:06,989 | INFO     | right removable region: 384
[2025-02-20 13:22:22] 2025-02-20 12:22:06,989 | INFO     | model: linear, x: [1740030688.0, 1740030749.0, 1740030810.0, 1740030871.0, 1740030932.0, 1740030993.0, 1740031054.0, 1740031115.0, 1740031176.0, 1740031237.0, 1740
[2025-02-20 13:22:22] 2025-02-20 12:22:06,990 | INFO     | sum of square deviations: 17695289920.0
[2025-02-20 13:22:22] 2025-02-20 12:22:06,993 | INFO     | sum of deviations: 64279243917.000015
[2025-02-20 13:22:22] 2025-02-20 12:22:06,993 | INFO     | mean x: 1740042400.0
[2025-02-20 13:22:22] 2025-02-20 12:22:06,994 | INFO     | mean y: 2358407.8623376624
[2025-02-20 13:22:22] 2025-02-20 12:22:06,994 | INFO     | -- intersect: -6318454099.939857
[2025-02-20 13:22:22] 2025-02-20 12:22:06,994 | INFO     | intersect: -6318454099.939857
[2025-02-20 13:22:22] 2025-02-20 12:22:06,994 | INFO     | chi2: 1.858707523682305
[2025-02-20 13:22:22] 2025-02-20 12:22:06,994 | INFO     | current chi2=1.858707523682305 (change=51.66787459135783 %)
[2025-02-20 13:22:22] 2025-02-20 12:22:06,995 | INFO     | model: linear, x: [1740030993.0, 1740031054.0, 1740031115.0, 1740031176.0, 1740031237.0, 1740031298.0, 1740031359.0, 1740031420.0, 1740031481.0, 1740031542.0, 1740
[2025-02-20 13:22:22] 2025-02-20 12:22:06,995 | INFO     | sum of square deviations: 17014774835.0
[2025-02-20 13:22:22] 2025-02-20 12:22:06,999 | INFO     | sum of deviations: 2546041424.0000076
[2025-02-20 13:22:22] 2025-02-20 12:22:06,999 | INFO     | mean x: 1740042552.5
[2025-02-20 13:22:22] 2025-02-20 12:22:06,999 | INFO     | mean y: 2372246.547368421
[2025-02-20 13:22:22] 2025-02-20 12:22:06,999 | INFO     | -- intersect: -258002660.62299192
[2025-02-20 13:22:22] 2025-02-20 12:22:06,999 | INFO     | intersect: -258002660.62299192
[2025-02-20 13:22:22] 2025-02-20 12:22:07,000 | INFO     | chi2: 0.8717368112738199
[2025-02-20 13:22:22] 2025-02-20 12:22:07,000 | INFO     | current chi2=0.8717368112738199 (change=53.099839530061566 %)
[2025-02-20 13:22:22] 2025-02-20 12:22:07,001 | INFO     | model: linear, x: [1740031298.0, 1740031359.0, 1740031420.0, 1740031481.0, 1740031542.0, 1740031603.0, 1740031664.0, 1740031725.0, 1740031786.0, 1740031847.0, 1740
[2025-02-20 13:22:22] 2025-02-20 12:22:07,001 | INFO     | sum of square deviations: 16351934500.0
[2025-02-20 13:22:22] 2025-02-20 12:22:07,005 | INFO     | sum of deviations: -9570188008.000002
[2025-02-20 13:22:22] 2025-02-20 12:22:07,005 | INFO     | mean x: 1740042705.0
[2025-02-20 13:22:22] 2025-02-20 12:22:07,005 | INFO     | mean y: 2375021.4106666665
[2025-02-20 13:22:22] 2025-02-20 12:22:07,005 | INFO     | -- intersect: 1020758248.7162117
[2025-02-20 13:22:22] 2025-02-20 12:22:07,005 | INFO     | intersect: 1020758248.7162117
[2025-02-20 13:22:22] 2025-02-20 12:22:07,006 | INFO     | chi2: 0.8161093297260195
[2025-02-20 13:22:22] 2025-02-20 12:22:07,006 | INFO     | current chi2=0.8161093297260195 (change=6.381224336106111 %)
[2025-02-20 13:22:22] 2025-02-20 12:22:07,006 | INFO     | left removable region: 30
[2025-02-20 13:22:22] 2025-02-20 12:22:07,006 | INFO     | model: linear, x: [1740032213.0, 1740032274.0, 1740032335.0, 1740032396.0, 1740032457.0, 1740032518.0, 1740032579.0, 1740032640.0, 1740032701.0, 1740032762.0, 1740
[2025-02-20 13:22:22] 2025-02-20 12:22:07,007 | INFO     | sum of square deviations: 13755764892.5
[2025-02-20 13:22:22] 2025-02-20 12:22:07,010 | INFO     | sum of deviations: 19969175696.0
[2025-02-20 13:22:22] 2025-02-20 12:22:07,010 | INFO     | mean x: 1740042979.5
[2025-02-20 13:22:22] 2025-02-20 12:22:07,010 | INFO     | mean y: 2379168.254237288
[2025-02-20 13:22:22] 2025-02-20 12:22:07,010 | INFO     | -- intersect: -2523632598.28678
[2025-02-20 13:22:22] 2025-02-20 12:22:07,010 | INFO     | intersect: -2523632598.28678
[2025-02-20 13:22:22] 2025-02-20 12:22:07,011 | INFO     | chi2: 0.003140012978936656
[2025-02-20 13:22:22] 2025-02-20 12:22:07,011 | INFO     | -- intersect: -2523632598.28678
[2025-02-20 13:22:22] 2025-02-20 12:22:07,011 | INFO     | current memory leak: 1.45 B/s (using 354 data points, chi2=0.00)
[2025-02-20 13:22:22] 2025-02-20 12:22:07,012 | INFO     | ..............................
[2025-02-20 13:22:22] 2025-02-20 12:22:07,012 | INFO     | . Timing measurements:
[2025-02-20 13:22:22] 2025-02-20 12:22:07,012 | INFO     | . get job = 0 s
[2025-02-20 13:22:22] 2025-02-20 12:22:07,012 | INFO     | . initial setup = 1 s
[2025-02-20 13:22:22] 2025-02-20 12:22:07,012 | INFO     | . payload setup = 6 s
[2025-02-20 13:22:22] 2025-02-20 12:22:07,012 | INFO     | . stage-in = 0 s
[2025-02-20 13:22:22] 2025-02-20 12:22:07,012 | INFO     | . payload execution = 23737 s
[2025-02-20 13:22:22] 2025-02-20 12:22:07,013 | INFO     | . stage-out = 1 s
[2025-02-20 13:22:22] 2025-02-20 12:22:07,013 | INFO     | . log creation = 0 s
[2025-02-20 13:22:22] 2025-02-20 12:22:07,013 | INFO     | ..............................
[2025-02-20 13:22:22] 2025-02-20 12:22:07,125 | WARNING  | process 3380744 can no longer be monitored (due to stat problems) - aborting
[2025-02-20 13:22:22] 2025-02-20 12:22:07,125 | INFO     | 
[2025-02-20 13:22:22] 2025-02-20 12:22:07,126 | INFO     | job summary report
[2025-02-20 13:22:22] 2025-02-20 12:22:07,126 | INFO     | --------------------------------------------------
[2025-02-20 13:22:22] 2025-02-20 12:22:07,126 | INFO     | PanDA job id: 6518211527
[2025-02-20 13:22:22] 2025-02-20 12:22:07,126 | INFO     | task id: 43078919
[2025-02-20 13:22:22] 2025-02-20 12:22:07,127 | INFO     | errors: (none)
[2025-02-20 13:22:22] 2025-02-20 12:22:07,127 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-20 13:22:22] 2025-02-20 12:22:07,127 | INFO     | pilot state: finished 
[2025-02-20 13:22:22] 2025-02-20 12:22:07,127 | INFO     | transexitcode: 0
[2025-02-20 13:22:22] 2025-02-20 12:22:07,127 | INFO     | exeerrorcode: 0
[2025-02-20 13:22:22] 2025-02-20 12:22:07,127 | INFO     | exeerrordiag: 
[2025-02-20 13:22:22] 2025-02-20 12:22:07,127 | INFO     | exitcode: 0
[2025-02-20 13:22:22] 2025-02-20 12:22:07,127 | INFO     | exitmsg: OK
[2025-02-20 13:22:22] 2025-02-20 12:22:07,127 | INFO     | cpuconsumptiontime: 90605 s
[2025-02-20 13:22:22] 2025-02-20 12:22:07,127 | INFO     | nevents: 400
[2025-02-20 13:22:22] 2025-02-20 12:22:07,127 | INFO     | neventsw: 0
[2025-02-20 13:22:22] 2025-02-20 12:22:07,127 | INFO     | pid: 3380744
[2025-02-20 13:22:22] 2025-02-20 12:22:07,128 | INFO     | pgrp: 3380744
[2025-02-20 13:22:22] 2025-02-20 12:22:07,128 | INFO     | corecount: 4
[2025-02-20 13:22:22] 2025-02-20 12:22:07,128 | INFO     | event service: False
[2025-02-20 13:22:22] 2025-02-20 12:22:07,128 | INFO     | sizes: {0: 2389326, 5: 2389532, 11: 2389588, 23747: 2424361, 23748: 2424360, 23749: 2433379, 23750: 2433563, 23756: 2433733}
[2025-02-20 13:22:22] 2025-02-20 12:22:07,128 | INFO     | --------------------------------------------------
[2025-02-20 13:22:22] 2025-02-20 12:22:07,128 | INFO     | 
[2025-02-20 13:22:22] 2025-02-20 12:22:07,128 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-02-20 13:22:22] 2025-02-20 12:22:07,128 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6518211527/memory_monitor_summary.json (trf name=prmon)
[2025-02-20 13:22:22] 2025-02-20 12:22:07,150 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-20 13:22:22] 2025-02-20 12:22:07,151 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-20 13:22:22] 2025-02-20 12:22:07,151 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-20 13:22:22] 2025-02-20 12:22:07,151 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-20 13:22:22] 2025-02-20 12:22:07,152 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-20 13:22:22] 2025-02-20 12:22:07,152 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-20 13:22:22] 2025-02-20 12:22:07,152 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-20 13:22:22] 2025-02-20 12:22:07,152 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-20 13:22:22] 2025-02-20 12:22:07,152 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-20 13:22:22] 2025-02-20 12:22:07,152 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-20 13:22:22] 2025-02-20 12:22:07,152 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-20 13:22:22] 2025-02-20 12:22:07,153 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-20 13:22:22] 2025-02-20 12:22:07,153 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-20 13:22:22] 2025-02-20 12:22:07,153 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-20 13:22:22] 2025-02-20 12:22:07,153 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-20 13:22:22] 2025-02-20 12:22:07,153 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-20 13:22:22] 2025-02-20 12:22:07,153 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-20 13:22:22] 2025-02-20 12:22:07,153 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-20 13:22:22] 2025-02-20 12:22:07,153 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-20 13:22:22] 2025-02-20 12:22:07,153 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-20 13:22:22] 2025-02-20 12:22:07,153 | INFO     | job 6518211527 has completed (purged errors)
[2025-02-20 13:22:22] 2025-02-20 12:22:07,154 | INFO     | overall cleanup function is called
[2025-02-20 13:22:22] 2025-02-20 12:22:07,284 | INFO     | number of running child processes to parent process 3380744: 1
[2025-02-20 13:22:22] 2025-02-20 12:22:07,284 | INFO     | maximum number of monitored processes: 6
[2025-02-20 13:22:22] 2025-02-20 12:22:07,284 | INFO     | aborting job monitoring since job object (job id=6518211527) has expired
[2025-02-20 13:22:22] 2025-02-20 12:22:08,160 | INFO     | --- collectZombieJob: --- 10, [3380744]
[2025-02-20 13:22:22] 2025-02-20 12:22:08,161 | INFO     | zombie collector waiting for pid 3380744
[2025-02-20 13:22:22] 2025-02-20 12:22:08,161 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-20 13:22:22] 2025-02-20 12:22:08,161 | INFO     | collected zombie processes
[2025-02-20 13:22:22] 2025-02-20 12:22:08,161 | INFO     | will attempt to kill all subprocesses of pid=3380744
[2025-02-20 13:22:22] 2025-02-20 12:22:08,304 | INFO     | process IDs to be killed: [3380744] (in reverse order)
[2025-02-20 13:22:22] 2025-02-20 12:22:08,412 | WARNING  | found no corresponding commands to process id(s)
[2025-02-20 13:22:22] 2025-02-20 12:22:08,412 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-20 13:22:22] 2025-02-20 12:22:08,422 | INFO     | did not find any defunct processes belonging to 3380744
[2025-02-20 13:22:22] 2025-02-20 12:22:08,431 | INFO     | did not find any defunct processes belonging to 3380744
[2025-02-20 13:22:22] 2025-02-20 12:22:08,432 | INFO     | ready for new job
[2025-02-20 13:22:22] 2025-02-20 12:22:08,432 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-20 13:22:22] 2025-02-20 12:22:08,435 | INFO     | **************************************
[2025-02-20 13:22:22] 2025-02-20 12:22:08,435 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-20 13:22:22] 2025-02-20 12:22:08,435 | INFO     | **************************************
[2025-02-20 13:22:22] 2025-02-20 12:22:08,435 | INFO     | 
[2025-02-20 13:22:22] 2025-02-20 12:22:08,439 | INFO     | architecture information:
[2025-02-20 13:22:22] 2025-02-20 12:22:08,439 | INFO     | executing command: cat /etc/os-release
[2025-02-20 13:22:22] 2025-02-20 12:22:08,455 | INFO     | cat /etc/os-release:
[2025-02-20 13:22:22] NAME="CentOS Linux"
[2025-02-20 13:22:22] VERSION="7 (Core)"
[2025-02-20 13:22:22] ID="centos"
[2025-02-20 13:22:22] ID_LIKE="rhel fedora"
[2025-02-20 13:22:22] VERSION_ID="7"
[2025-02-20 13:22:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-20 13:22:22] ANSI_COLOR="0;31"
[2025-02-20 13:22:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-20 13:22:22] HOME_URL="https://www.centos.org/"
[2025-02-20 13:22:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-20 13:22:22] 
[2025-02-20 13:22:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-20 13:22:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-20 13:22:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-20 13:22:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-20 13:22:22] 
[2025-02-20 13:22:22] 2025-02-20 12:22:08,455 | INFO     | **************************************
[2025-02-20 13:22:22] 2025-02-20 12:22:08,959 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-02-20 13:22:22] 2025-02-20 12:22:08,977 | INFO     | sufficient remaining disk space (666061766656 B)
[2025-02-20 13:22:22] 2025-02-20 12:22:08,978 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-20 13:22:22] 2025-02-20 12:22:08,978 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-20 13:22:22] 2025-02-20 12:22:08,978 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-20 13:22:22] 2025-02-20 12:22:08,979 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-20 13:22:22] 2025-02-20 12:22:08,979 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-20 13:22:22] 2025-02-20 12:22:08,979 | INFO     | aborting loop
[2025-02-20 13:22:22] 2025-02-20 12:22:09,466 | INFO     | all job control threads have been joined
[2025-02-20 13:22:22] 2025-02-20 12:22:09,470 | INFO     | all data control threads have been joined
[2025-02-20 13:22:22] 2025-02-20 12:22:09,472 | INFO     | found 0 job(s) in 20 queues
[2025-02-20 13:22:22] 2025-02-20 12:22:09,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-20 13:22:22] 2025-02-20 12:22:09,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-20 13:22:22] 2025-02-20 12:22:09,678 | INFO     | all payload control threads have been joined
[2025-02-20 13:22:22] 2025-02-20 12:22:09,980 | INFO     | [job] retrieve thread has finished
[2025-02-20 13:22:22] 2025-02-20 12:22:09,985 | INFO     | [job] queue monitor thread has finished
[2025-02-20 13:22:22] 2025-02-20 12:22:09,985 | INFO     | [job] job monitor thread has finished
[2025-02-20 13:22:22] 2025-02-20 12:22:10,034 | INFO     | [job] create_data_payload thread has finished
[2025-02-20 13:22:22] 2025-02-20 12:22:10,092 | INFO     | [payload] validate_pre thread has finished
[2025-02-20 13:22:22] 2025-02-20 12:22:10,146 | INFO     | [data] copytool_in thread has finished
[2025-02-20 13:22:22] 2025-02-20 12:22:10,471 | INFO     | [job] control thread has finished
[2025-02-20 13:22:22] 2025-02-20 12:22:10,475 | INFO     | [data] control thread has finished
[2025-02-20 13:22:22] 2025-02-20 12:22:10,632 | INFO     | [payload] failed_post thread has finished
[2025-02-20 13:22:22] 2025-02-20 12:22:10,652 | INFO     | [payload] validate_post thread has finished
[2025-02-20 13:22:22] 2025-02-20 12:22:10,674 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-20 13:22:22] 2025-02-20 12:22:10,683 | INFO     | [payload] control thread has finished
[2025-02-20 13:22:22] 2025-02-20 12:22:10,984 | INFO     | [data] copytool_out thread has finished
[2025-02-20 13:22:22] 2025-02-20 12:22:11,232 | INFO     | [job] validate thread has finished
[2025-02-20 13:22:22] 2025-02-20 12:22:11,363 | INFO     | [payload] execute_payloads thread has finished
[2025-02-20 13:22:22] 2025-02-20 12:22:11,480 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-20 13:22:22] 2025-02-20 12:22:15,485 | INFO     | [data] queue_monitor thread has finished
[2025-02-20 13:22:22] 2025-02-20 12:22:17,388 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22368853063488)>', '<ExcThread(monitor, started 22368604854016)>']
[2025-02-20 13:22:22] 2025-02-20 12:22:17,512 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-20 13:22:22] 2025-02-20 12:22:17,513 | INFO     | [monitor] control thread has ended
[2025-02-20 13:22:22] 2025-02-20 12:22:22,413 | INFO     | all workflow threads have been joined
[2025-02-20 13:22:22] 2025-02-20 12:22:22,414 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-20 13:22:22] 2025-02-20 12:22:22,414 | INFO     | traces error code: 0
[2025-02-20 13:22:22] 2025-02-20 12:22:22,414 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-20 13:22:22] 2025-02-20 12:22:22,569 [wrapper] ==== pilot stdout END ====
[2025-02-20 13:22:22] 2025-02-20 12:22:22,572 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-20 13:22:22] 2025-02-20 12:22:22,575 [wrapper] pilotpid: 3373303
[2025-02-20 13:22:22] 2025-02-20 12:22:22,577 [wrapper] Pilot exit status: 0
[2025-02-20 13:22:22] 2025-02-20 12:22:22,588 [wrapper] pandaids: 6518211527
[2025-02-20 13:22:22] 2025-02-20 12:22:22,651 [wrapper] cleanup supervisor_pilot  101851 3373304
[2025-02-20 13:22:22] 2025-02-20 12:22:22,655 [wrapper] Test setup, not cleaning
[2025-02-20 13:22:22] 2025-02-20 12:22:22,660 [wrapper] apfmon messages muted
[2025-02-20 13:22:22] 2025-02-20 12:22:22,664 [wrapper] ==== wrapper stdout END ====
[2025-02-20 13:22:22] 2025-02-20 12:22:22,667 [wrapper] ==== wrapper stderr END ====
[2025-02-20 13:22:22]  *** Error codes and diagnostics ***
[2025-02-20 13:22:22]     "exeErrorCode": 0,
[2025-02-20 13:22:22]     "exeErrorDiag": "",
[2025-02-20 13:22:22]     "pilotErrorCode": 0,
[2025-02-20 13:22:22]     "pilotErrorDiag": "",
[2025-02-20 13:22:22]  *** Listing of results directory ***
[2025-02-20 13:22:22] total 664900
[2025-02-20 13:22:22] -rw-r--r-- 1 boinc boinc    491065 Feb 18 15:25 pilot3.tar.gz
[2025-02-20 13:22:22] -rwx------ 1 boinc boinc     35865 Feb 18 15:35 runpilot2-wrapper.sh
[2025-02-20 13:22:22] -rw-r--r-- 1 boinc boinc      5118 Feb 18 15:35 queuedata.json
[2025-02-20 13:22:22] -rw-r--r-- 1 boinc boinc       100 Feb 20 06:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-20 13:22:22] -rwxr-xr-x 1 boinc boinc      7986 Feb 20 06:45 run_atlas
[2025-02-20 13:22:22] -rw-r--r-- 1 boinc boinc       105 Feb 20 06:45 job.xml
[2025-02-20 13:22:22] -rw-r--r-- 2 boinc boinc 341852528 Feb 20 06:45 EVNT.43078917._001815.pool.root.1
[2025-02-20 13:22:22] -rw-r--r-- 1 boinc boinc      6637 Feb 20 06:45 init_data.xml
[2025-02-20 13:22:22] -rw-r--r-- 2 boinc boinc     17569 Feb 20 06:45 start_atlas.sh
[2025-02-20 13:22:22] drwxrwx--x 2 boinc boinc      4096 Feb 20 06:45 shared
[2025-02-20 13:22:22] -rw-r--r-- 2 boinc boinc    503558 Feb 20 06:45 input.tar.gz
[2025-02-20 13:22:22] -rw-r--r-- 1 boinc boinc         0 Feb 20 06:45 boinc_lockfile
[2025-02-20 13:22:22] -rw-r--r-- 1 boinc boinc      2545 Feb 20 06:45 pandaJob.out
[2025-02-20 13:22:22] -rw------- 1 boinc boinc       424 Feb 20 06:45 setup.sh.local
[2025-02-20 13:22:22] -rw------- 1 boinc boinc    987365 Feb 20 06:45 agis_schedconf.cvmfs.json
[2025-02-20 13:22:22] drwx------ 4 boinc boinc      4096 Feb 20 06:45 pilot3
[2025-02-20 13:22:22] -rw------- 1 boinc boinc 328406999 Feb 20 13:21 HITS.43078919._071941.pool.root.1
[2025-02-20 13:22:22] -rw-r--r-- 1 boinc boinc       532 Feb 20 13:21 boinc_task_state.xml
[2025-02-20 13:22:22] -rw------- 1 boinc boinc      1034 Feb 20 13:21 memory_monitor_summary.json
[2025-02-20 13:22:22] -rw------- 1 boinc boinc   1586690 Feb 20 13:21 agis_ddmendpoints.agis.ALL.json
[2025-02-20 13:22:22] -rw------- 1 boinc boinc    460721 Feb 20 13:21 log.43078919._071941.job.log.tgz.1
[2025-02-20 13:22:22] -rw-r--r-- 1 boinc boinc      8192 Feb 20 13:22 boinc_mmap_file
[2025-02-20 13:22:22] -rw-r--r-- 1 boinc boinc        28 Feb 20 13:22 wrapper_checkpoint.txt
[2025-02-20 13:22:22] -rw------- 1 boinc boinc      7738 Feb 20 13:22 heartbeat.json
[2025-02-20 13:22:22] -rw------- 1 boinc boinc        95 Feb 20 13:22 pilot_heartbeat.json
[2025-02-20 13:22:22] -rw------- 1 boinc boinc      4225 Feb 20 13:22 pilotlog.txt
[2025-02-20 13:22:22] -rw------- 1 boinc boinc   2930018 Feb 20 13:22 log.43078919._071941.job.log.1
[2025-02-20 13:22:22] -rw------- 1 boinc boinc       357 Feb 20 13:22 output.list
[2025-02-20 13:22:22] -rw-r--r-- 1 boinc boinc       620 Feb 20 13:22 runtime_log
[2025-02-20 13:22:22] -rw------- 1 boinc boinc   3409920 Feb 20 13:22 result.tar.gz
[2025-02-20 13:22:22] -rw-r--r-- 1 boinc boinc     11424 Feb 20 13:22 runtime_log.err
[2025-02-20 13:22:22] -rw------- 1 boinc boinc       666 Feb 20 13:22 SmJMDmTsd46n9Rq4apOajLDm4fhM0noT9bVoFjIUDm5MZKDm5ZlLRm.diag
[2025-02-20 13:22:22] -rw-r--r-- 1 boinc boinc     21353 Feb 20 13:22 stderr.txt
[2025-02-20 13:22:22] HITS file was successfully produced:
[2025-02-20 13:22:22] -rw------- 1 boinc boinc 328406999 Feb 20 13:21 shared/HITS.pool.root.1
[2025-02-20 13:22:22]  *** Contents of shared directory: ***
[2025-02-20 13:22:22] total 658408
[2025-02-20 13:22:22] -rw-r--r-- 2 boinc boinc 341852528 Feb 20 06:45 ATLAS.root_0
[2025-02-20 13:22:22] -rw-r--r-- 2 boinc boinc     17569 Feb 20 06:45 start_atlas.sh
[2025-02-20 13:22:22] -rw-r--r-- 2 boinc boinc    503558 Feb 20 06:45 input.tar.gz
[2025-02-20 13:22:22] -rw------- 1 boinc boinc 328406999 Feb 20 13:21 HITS.pool.root.1
[2025-02-20 13:22:22] -rw------- 1 boinc boinc   3409920 Feb 20 13:22 result.tar.gz
13:22:24 (3369584): run_atlas exited; CPU time 90718.702729
13:22:24 (3369584): called boinc_finish(0)

</stderr_txt>
]]>

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