Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:29:14 (2563699): wrapper (7.7.26015): starting
16:29:14 (2563699): wrapper: running run_atlas (--nthreads 4)
[2025-02-20 16:29:14] Arguments: --nthreads 4
[2025-02-20 16:29:14] Threads: 4
[2025-02-20 16:29:14] Checking for CVMFS
[2025-02-20 16:29:14] No cvmfs_config command found, will try listing directly
[2025-02-20 16:29:14] CVMFS is ok
[2025-02-20 16:29:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-20 16:29:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-20 16:29:14] Further information can be found at the LHC@home message board.
[2025-02-20 16:29:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-20 16:29:14] Checking for apptainer binary...
[2025-02-20 16:29:14] which: no apptainer in ((null))
[2025-02-20 16:29:14] apptainer is not installed, using version from CVMFS
[2025-02-20 16:29:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-20 16:29:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-02-20 16:29:14] apptainer works
[2025-02-20 16:29:14] Set ATHENA_PROC_NUMBER=4
[2025-02-20 16:29:14] Set ATHENA_CORE_NUMBER=4
[2025-02-20 16:29:14] Starting ATLAS job with PandaID=6518194740
[2025-02-20 16:29:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-20 23:28:09]  *** The last 200 lines of the pilot log: ***
[2025-02-20 23:28:09] 2025-02-20 22:27:49,938 | INFO     | intersect: 1688780914.9681137
[2025-02-20 23:28:09] 2025-02-20 22:27:49,938 | INFO     | chi2: 0.09440592894530565
[2025-02-20 23:28:09] 2025-02-20 22:27:49,938 | INFO     | current chi2=0.09440592894530565 (change=90.14711507108811 %)
[2025-02-20 23:28:09] 2025-02-20 22:27:49,939 | INFO     | model: linear, x: [1740066308.0, 1740066369.0, 1740066430.0, 1740066491.0, 1740066552.0, 1740066613.0, 1740066674.0, 1740066735.0, 1740066796.0, 1740066857.0, 1740
[2025-02-20 23:28:09] 2025-02-20 22:27:49,939 | INFO     | sum of square deviations: 19255784295.0
[2025-02-20 23:28:09] 2025-02-20 22:27:49,943 | INFO     | sum of deviations: -19984742499.500008
[2025-02-20 23:28:09] 2025-02-20 22:27:49,943 | INFO     | mean x: 1740078355.5
[2025-02-20 23:28:09] 2025-02-20 22:27:49,943 | INFO     | mean y: 2388169.765151515
[2025-02-20 23:28:09] 2025-02-20 22:27:49,944 | INFO     | -- intersect: 1808339946.6891737
[2025-02-20 23:28:09] 2025-02-20 22:27:49,944 | INFO     | intersect: 1808339946.6891737
[2025-02-20 23:28:09] 2025-02-20 22:27:49,944 | INFO     | chi2: 0.06691826226264444
[2025-02-20 23:28:09] 2025-02-20 22:27:49,944 | INFO     | current chi2=0.06691826226264444 (change=29.11646227069729 %)
[2025-02-20 23:28:09] 2025-02-20 22:27:49,945 | INFO     | model: linear, x: [1740066613.0, 1740066674.0, 1740066735.0, 1740066796.0, 1740066857.0, 1740066918.0, 1740066979.0, 1740067040.0, 1740067101.0, 1740067162.0, 1740
[2025-02-20 23:28:09] 2025-02-20 22:27:49,945 | INFO     | sum of square deviations: 18535566140.0
[2025-02-20 23:28:09] 2025-02-20 22:27:49,949 | INFO     | sum of deviations: -8890749938.999994
[2025-02-20 23:28:09] 2025-02-20 22:27:49,949 | INFO     | mean x: 1740078508.0
[2025-02-20 23:28:09] 2025-02-20 22:27:49,949 | INFO     | mean y: 2385820.286445013
[2025-02-20 23:28:09] 2025-02-20 22:27:49,949 | INFO     | -- intersect: 837030026.5656605
[2025-02-20 23:28:09] 2025-02-20 22:27:49,950 | INFO     | intersect: 837030026.5656605
[2025-02-20 23:28:09] 2025-02-20 22:27:49,950 | INFO     | chi2: 0.03640931264858198
[2025-02-20 23:28:09] 2025-02-20 22:27:49,950 | INFO     | current chi2=0.03640931264858198 (change=45.59136561902829 %)
[2025-02-20 23:28:09] 2025-02-20 22:27:49,951 | INFO     | model: linear, x: [1740066918.0, 1740066979.0, 1740067040.0, 1740067101.0, 1740067162.0, 1740067223.0, 1740067284.0, 1740067345.0, 1740067406.0, 1740067467.0, 1740
[2025-02-20 23:28:09] 2025-02-20 22:27:49,951 | INFO     | sum of square deviations: 17833534372.5
[2025-02-20 23:28:09] 2025-02-20 22:27:49,955 | INFO     | sum of deviations: -4080415873.500005
[2025-02-20 23:28:09] 2025-02-20 22:27:49,955 | INFO     | mean x: 1740078660.5
[2025-02-20 23:28:09] 2025-02-20 22:27:49,955 | INFO     | mean y: 2384774.670984456
[2025-02-20 23:28:09] 2025-02-20 22:27:49,955 | INFO     | -- intersect: 400524842.6539008
[2025-02-20 23:28:09] 2025-02-20 22:27:49,955 | INFO     | intersect: 400524842.6539008
[2025-02-20 23:28:09] 2025-02-20 22:27:49,956 | INFO     | chi2: 0.03125593153437704
[2025-02-20 23:28:09] 2025-02-20 22:27:49,956 | INFO     | current chi2=0.03125593153437704 (change=14.154019231136578 %)
[2025-02-20 23:28:09] 2025-02-20 22:27:49,956 | INFO     | left removable region: 50
[2025-02-20 23:28:09] 2025-02-20 22:27:49,957 | INFO     | model: linear, x: [1740068443.0, 1740068504.0, 1740068565.0, 1740068626.0, 1740068687.0, 1740068748.0, 1740068809.0, 1740068870.0, 1740068931.0, 1740068992.0, 1740
[2025-02-20 23:28:09] 2025-02-20 22:27:49,957 | INFO     | sum of square deviations: 13872669410.0
[2025-02-20 23:28:09] 2025-02-20 22:27:49,960 | INFO     | sum of deviations: 12702344882.000002
[2025-02-20 23:28:09] 2025-02-20 22:27:49,961 | INFO     | mean x: 1740079240.0
[2025-02-20 23:28:09] 2025-02-20 22:27:49,961 | INFO     | mean y: 2380816.028169014
[2025-02-20 23:28:09] 2025-02-20 22:27:49,961 | INFO     | -- intersect: -1590902060.918039
[2025-02-20 23:28:09] 2025-02-20 22:27:49,961 | INFO     | intersect: -1590902060.918039
[2025-02-20 23:28:09] 2025-02-20 22:27:49,961 | INFO     | chi2: 0.0017080182632572306
[2025-02-20 23:28:09] 2025-02-20 22:27:49,962 | INFO     | -- intersect: -1590902060.918039
[2025-02-20 23:28:09] 2025-02-20 22:27:49,962 | INFO     | current memory leak: 0.92 B/s (using 355 data points, chi2=0.00)
[2025-02-20 23:28:09] 2025-02-20 22:27:49,963 | INFO     | ..............................
[2025-02-20 23:28:09] 2025-02-20 22:27:49,964 | INFO     | . Timing measurements:
[2025-02-20 23:28:09] 2025-02-20 22:27:49,964 | INFO     | . get job = 0 s
[2025-02-20 23:28:09] 2025-02-20 22:27:49,964 | INFO     | . initial setup = 1 s
[2025-02-20 23:28:09] 2025-02-20 22:27:49,964 | INFO     | . payload setup = 6 s
[2025-02-20 23:28:09] 2025-02-20 22:27:49,964 | INFO     | . stage-in = 0 s
[2025-02-20 23:28:09] 2025-02-20 22:27:49,964 | INFO     | . payload execution = 25072 s
[2025-02-20 23:28:09] 2025-02-20 22:27:49,964 | INFO     | . stage-out = 1 s
[2025-02-20 23:28:09] 2025-02-20 22:27:49,964 | INFO     | . log creation = 0 s
[2025-02-20 23:28:09] 2025-02-20 22:27:49,964 | INFO     | ..............................
[2025-02-20 23:28:09] 2025-02-20 22:27:50,078 | WARNING  | process 2574403 can no longer be monitored (due to stat problems) - aborting
[2025-02-20 23:28:09] 2025-02-20 22:27:50,079 | INFO     | using path: /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-6518194740/memory_monitor_summary.json (trf name=prmon)
[2025-02-20 23:28:09] 2025-02-20 22:27:50,079 | INFO     | using path: /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-6518194740/memory_monitor_summary.json (trf name=prmon)
[2025-02-20 23:28:09] 2025-02-20 22:27:50,081 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 1998411 B
[2025-02-20 23:28:09] 2025-02-20 22:27:50,081 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16042 B
[2025-02-20 23:28:09] 2025-02-20 22:27:50,081 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2025-02-20 23:28:09] 2025-02-20 22:27:50,098 | INFO     | sufficient remaining disk space (656894066688 B)
[2025-02-20 23:28:09] 2025-02-20 22:27:50,099 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-02-20 23:28:09] 2025-02-20 22:27:50,100 | INFO     | size of work directory /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-6518194740: 2427013 B (within 2537553920 B limit)
[2025-02-20 23:28:09] 2025-02-20 22:27:50,100 | INFO     | pfn file=/scratch/boinc/var/slot24/slots/0/PanDA_Pilot-6518194740/HITS.43078919._071095.pool.root.1 does not exist (skip from workdir size calculation)
[2025-02-20 23:28:09] 2025-02-20 22:27:50,100 | INFO     | total size of present files: 0 B (workdir size: 2427013 B)
[2025-02-20 23:28:09] 2025-02-20 22:27:50,100 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-6518194740/HITS.43078919._071095.pool.root.1 since it does not exist
[2025-02-20 23:28:09] 2025-02-20 22:27:50,249 | INFO     | number of running child processes to parent process 2574403: 1
[2025-02-20 23:28:09] 2025-02-20 22:27:50,250 | INFO     | maximum number of monitored processes: 6
[2025-02-20 23:28:09] 2025-02-20 22:27:50,250 | INFO     | aborting job monitoring since job object (job id=6518194740) has expired
[2025-02-20 23:28:09] 2025-02-20 22:27:50,434 | INFO     | 
[2025-02-20 23:28:09] 2025-02-20 22:27:50,434 | INFO     | job summary report
[2025-02-20 23:28:09] 2025-02-20 22:27:50,434 | INFO     | --------------------------------------------------
[2025-02-20 23:28:09] 2025-02-20 22:27:50,434 | INFO     | PanDA job id: 6518194740
[2025-02-20 23:28:09] 2025-02-20 22:27:50,434 | INFO     | task id: 43078919
[2025-02-20 23:28:09] 2025-02-20 22:27:50,434 | INFO     | errors: (none)
[2025-02-20 23:28:09] 2025-02-20 22:27:50,434 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-20 23:28:09] 2025-02-20 22:27:50,435 | INFO     | pilot state: finished 
[2025-02-20 23:28:09] 2025-02-20 22:27:50,435 | INFO     | transexitcode: 0
[2025-02-20 23:28:09] 2025-02-20 22:27:50,435 | INFO     | exeerrorcode: 0
[2025-02-20 23:28:09] 2025-02-20 22:27:50,435 | INFO     | exeerrordiag: 
[2025-02-20 23:28:09] 2025-02-20 22:27:50,435 | INFO     | exitcode: 0
[2025-02-20 23:28:09] 2025-02-20 22:27:50,435 | INFO     | exitmsg: OK
[2025-02-20 23:28:09] 2025-02-20 22:27:50,435 | INFO     | cpuconsumptiontime: 94834 s
[2025-02-20 23:28:09] 2025-02-20 22:27:50,435 | INFO     | nevents: 400
[2025-02-20 23:28:09] 2025-02-20 22:27:50,435 | INFO     | neventsw: 0
[2025-02-20 23:28:09] 2025-02-20 22:27:50,435 | INFO     | pid: 2574403
[2025-02-20 23:28:09] 2025-02-20 22:27:50,435 | INFO     | pgrp: 2574403
[2025-02-20 23:28:09] 2025-02-20 22:27:50,435 | INFO     | corecount: 4
[2025-02-20 23:28:09] 2025-02-20 22:27:50,436 | INFO     | event service: False
[2025-02-20 23:28:09] 2025-02-20 22:27:50,436 | INFO     | sizes: {0: 2389330, 5: 2389536, 11: 2389592, 25083: 2424586, 25085: 2433605, 25089: 2433719}
[2025-02-20 23:28:09] 2025-02-20 22:27:50,436 | INFO     | --------------------------------------------------
[2025-02-20 23:28:09] 2025-02-20 22:27:50,436 | INFO     | 
[2025-02-20 23:28:09] 2025-02-20 22:27:50,436 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2025-02-20 23:28:09] 2025-02-20 22:27:50,459 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-20 23:28:09] 2025-02-20 22:27:50,459 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-20 23:28:09] 2025-02-20 22:27:50,459 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-20 23:28:09] 2025-02-20 22:27:50,459 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-20 23:28:09] 2025-02-20 22:27:50,460 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-20 23:28:09] 2025-02-20 22:27:50,460 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-20 23:28:09] 2025-02-20 22:27:50,460 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-20 23:28:09] 2025-02-20 22:27:50,460 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-20 23:28:09] 2025-02-20 22:27:50,460 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-20 23:28:09] 2025-02-20 22:27:50,460 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-20 23:28:09] 2025-02-20 22:27:50,460 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-20 23:28:09] 2025-02-20 22:27:50,460 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-20 23:28:09] 2025-02-20 22:27:50,460 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-20 23:28:09] 2025-02-20 22:27:50,460 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-20 23:28:09] 2025-02-20 22:27:50,460 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-20 23:28:09] 2025-02-20 22:27:50,461 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-20 23:28:09] 2025-02-20 22:27:50,461 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-20 23:28:09] 2025-02-20 22:27:50,461 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-20 23:28:09] 2025-02-20 22:27:50,461 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-20 23:28:09] 2025-02-20 22:27:50,461 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-20 23:28:09] 2025-02-20 22:27:50,461 | INFO     | job 6518194740 has completed (purged errors)
[2025-02-20 23:28:09] 2025-02-20 22:27:50,461 | INFO     | overall cleanup function is called
[2025-02-20 23:28:09] 2025-02-20 22:27:51,375 | INFO     | 25107s have passed since pilot start
[2025-02-20 23:28:09] 2025-02-20 22:27:51,469 | INFO     | --- collectZombieJob: --- 10, [2574403]
[2025-02-20 23:28:09] 2025-02-20 22:27:51,469 | INFO     | zombie collector waiting for pid 2574403
[2025-02-20 23:28:09] 2025-02-20 22:27:51,469 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-20 23:28:09] 2025-02-20 22:27:51,469 | INFO     | collected zombie processes
[2025-02-20 23:28:09] 2025-02-20 22:27:51,469 | INFO     | will attempt to kill all subprocesses of pid=2574403
[2025-02-20 23:28:09] 2025-02-20 22:27:51,612 | INFO     | process IDs to be killed: [2574403] (in reverse order)
[2025-02-20 23:28:09] 2025-02-20 22:27:51,729 | WARNING  | found no corresponding commands to process id(s)
[2025-02-20 23:28:09] 2025-02-20 22:27:51,729 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-20 23:28:09] 2025-02-20 22:27:51,740 | INFO     | did not find any defunct processes belonging to 2574403
[2025-02-20 23:28:09] 2025-02-20 22:27:51,750 | INFO     | did not find any defunct processes belonging to 2574403
[2025-02-20 23:28:09] 2025-02-20 22:27:51,750 | INFO     | ready for new job
[2025-02-20 23:28:09] 2025-02-20 22:27:51,750 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-20 23:28:09] 2025-02-20 22:27:51,753 | INFO     | **************************************
[2025-02-20 23:28:09] 2025-02-20 22:27:51,753 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-20 23:28:09] 2025-02-20 22:27:51,753 | INFO     | **************************************
[2025-02-20 23:28:09] 2025-02-20 22:27:51,753 | INFO     | 
[2025-02-20 23:28:09] 2025-02-20 22:27:51,757 | INFO     | architecture information:
[2025-02-20 23:28:09] 2025-02-20 22:27:51,758 | INFO     | executing command: cat /etc/os-release
[2025-02-20 23:28:09] 2025-02-20 22:27:51,774 | INFO     | cat /etc/os-release:
[2025-02-20 23:28:09] NAME="CentOS Linux"
[2025-02-20 23:28:09] VERSION="7 (Core)"
[2025-02-20 23:28:09] ID="centos"
[2025-02-20 23:28:09] ID_LIKE="rhel fedora"
[2025-02-20 23:28:09] VERSION_ID="7"
[2025-02-20 23:28:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-20 23:28:09] ANSI_COLOR="0;31"
[2025-02-20 23:28:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-20 23:28:09] HOME_URL="https://www.centos.org/"
[2025-02-20 23:28:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-20 23:28:09] 
[2025-02-20 23:28:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-20 23:28:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-20 23:28:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-20 23:28:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-20 23:28:09] 
[2025-02-20 23:28:09] 2025-02-20 22:27:51,775 | INFO     | **************************************
[2025-02-20 23:28:09] 2025-02-20 22:27:52,278 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2025-02-20 23:28:09] 2025-02-20 22:27:52,296 | INFO     | sufficient remaining disk space (656899309568 B)
[2025-02-20 23:28:09] 2025-02-20 22:27:52,296 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-20 23:28:09] 2025-02-20 22:27:52,297 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-20 23:28:09] 2025-02-20 22:27:52,297 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-20 23:28:09] 2025-02-20 22:27:52,380 | INFO     | found 0 job(s) in 20 queues
[2025-02-20 23:28:09] 2025-02-20 22:27:52,380 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-20 23:28:09] 2025-02-20 22:27:52,380 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-20 23:28:09] 2025-02-20 22:27:52,753 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-20 23:28:09] 2025-02-20 22:27:52,753 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-20 23:28:09] 2025-02-20 22:27:52,753 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-20 23:28:09] 2025-02-20 22:27:52,753 | INFO     | will abort loop
[2025-02-20 23:28:09] 2025-02-20 22:27:53,298 | INFO     | all data control threads have been joined
[2025-02-20 23:28:09] 2025-02-20 22:27:53,302 | INFO     | [job] retrieve thread has finished
[2025-02-20 23:28:09] 2025-02-20 22:27:53,442 | INFO     | all job control threads have been joined
[2025-02-20 23:28:09] 2025-02-20 22:27:53,520 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-20 23:28:09] 2025-02-20 22:27:53,701 | INFO     | all payload control threads have been joined
[2025-02-20 23:28:09] 2025-02-20 22:27:53,709 | INFO     | [job] validate thread has finished
[2025-02-20 23:28:09] 2025-02-20 22:27:53,758 | INFO     | [job] job monitor thread has finished
[2025-02-20 23:28:09] 2025-02-20 22:27:53,986 | INFO     | [payload] execute_payloads thread has finished
[2025-02-20 23:28:09] 2025-02-20 22:27:54,011 | INFO     | [payload] failed_post thread has finished
[2025-02-20 23:28:09] 2025-02-20 22:27:54,229 | INFO     | [data] copytool_in thread has finished
[2025-02-20 23:28:09] 2025-02-20 22:27:54,303 | INFO     | [data] control thread has finished
[2025-02-20 23:28:09] 2025-02-20 22:27:54,392 | INFO     | [job] create_data_payload thread has finished
[2025-02-20 23:28:09] 2025-02-20 22:27:54,447 | INFO     | [job] control thread has finished
[2025-02-20 23:28:09] 2025-02-20 22:27:54,685 | INFO     | [payload] validate_pre thread has finished
[2025-02-20 23:28:09] 2025-02-20 22:27:54,687 | INFO     | [payload] validate_post thread has finished
[2025-02-20 23:28:09] 2025-02-20 22:27:54,706 | INFO     | [payload] control thread has finished
[2025-02-20 23:28:09] 2025-02-20 22:27:55,079 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-20 23:28:09] 2025-02-20 22:27:55,525 | INFO     | [data] copytool_out thread has finished
[2025-02-20 23:28:09] 2025-02-20 22:27:56,084 | INFO     | [job] queue monitor thread has finished
[2025-02-20 23:28:09] 2025-02-20 22:27:56,303 | INFO     | [data] queue_monitor thread has finished
[2025-02-20 23:28:09] 2025-02-20 22:28:02,674 | INFO     | job.realtimelogging is not enabled
[2025-02-20 23:28:09] 2025-02-20 22:28:03,681 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-20 23:28:09] 2025-02-20 22:28:04,251 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23451006261056)>', '<ExcThread(monitor, started 23450775164672)>']
[2025-02-20 23:28:09] 2025-02-20 22:28:04,440 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-20 23:28:09] 2025-02-20 22:28:04,440 | INFO     | [monitor] control thread has ended
[2025-02-20 23:28:09] 2025-02-20 22:28:09,276 | INFO     | all workflow threads have been joined
[2025-02-20 23:28:09] 2025-02-20 22:28:09,276 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-20 23:28:09] 2025-02-20 22:28:09,276 | INFO     | traces error code: 0
[2025-02-20 23:28:09] 2025-02-20 22:28:09,276 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-20 23:28:09] 2025-02-20 22:28:09,428 [wrapper] ==== pilot stdout END ====
[2025-02-20 23:28:09] 2025-02-20 22:28:09,431 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-20 23:28:09] 2025-02-20 22:28:09,435 [wrapper] pilotpid: 2567421
[2025-02-20 23:28:09] 2025-02-20 22:28:09,437 [wrapper] Pilot exit status: 0
[2025-02-20 23:28:09] 2025-02-20 22:28:09,448 [wrapper] pandaids: 6518194740
[2025-02-20 23:28:09] 2025-02-20 22:28:09,513 [wrapper] cleanup supervisor_pilot 3474206 2567422
[2025-02-20 23:28:09] 2025-02-20 22:28:09,517 [wrapper] Test setup, not cleaning
[2025-02-20 23:28:09] 2025-02-20 22:28:09,522 [wrapper] apfmon messages muted
[2025-02-20 23:28:09] 2025-02-20 22:28:09,525 [wrapper] ==== wrapper stdout END ====
[2025-02-20 23:28:09] 2025-02-20 22:28:09,527 [wrapper] ==== wrapper stderr END ====
[2025-02-20 23:28:09]  *** Error codes and diagnostics ***
[2025-02-20 23:28:09]     "exeErrorCode": 0,
[2025-02-20 23:28:09]     "exeErrorDiag": "",
[2025-02-20 23:28:09]     "pilotErrorCode": 0,
[2025-02-20 23:28:09]     "pilotErrorDiag": "",
[2025-02-20 23:28:09]  *** Listing of results directory ***
[2025-02-20 23:28:09] total 660740
[2025-02-20 23:28:09] -rw-r--r-- 1 boinc boinc    491065 Feb 18 13:30 pilot3.tar.gz
[2025-02-20 23:28:09] -rw-r--r-- 1 boinc boinc      5118 Feb 18 13:49 queuedata.json
[2025-02-20 23:28:09] -rwx------ 1 boinc boinc     35862 Feb 18 13:51 runpilot2-wrapper.sh
[2025-02-20 23:28:09] -rw-r--r-- 1 boinc boinc       100 Feb 20 16:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-20 23:28:09] -rwxr-xr-x 1 boinc boinc      7986 Feb 20 16:29 run_atlas
[2025-02-20 23:28:09] -rw-r--r-- 1 boinc boinc       105 Feb 20 16:29 job.xml
[2025-02-20 23:28:09] -rw-r--r-- 2 boinc boinc 340103730 Feb 20 16:29 EVNT.43078917._001670.pool.root.1
[2025-02-20 23:28:09] -rw-r--r-- 1 boinc boinc      6636 Feb 20 16:29 init_data.xml
[2025-02-20 23:28:09] -rw-r--r-- 2 boinc boinc     17569 Feb 20 16:29 start_atlas.sh
[2025-02-20 23:28:09] drwxrwx--x 2 boinc boinc      4096 Feb 20 16:29 shared
[2025-02-20 23:28:09] -rw-r--r-- 2 boinc boinc    503566 Feb 20 16:29 input.tar.gz
[2025-02-20 23:28:09] -rw-r--r-- 1 boinc boinc         0 Feb 20 16:29 boinc_lockfile
[2025-02-20 23:28:09] -rw-r--r-- 1 boinc boinc      2547 Feb 20 16:29 pandaJob.out
[2025-02-20 23:28:09] -rw------- 1 boinc boinc       424 Feb 20 16:29 setup.sh.local
[2025-02-20 23:28:09] -rw------- 1 boinc boinc    987482 Feb 20 16:29 agis_schedconf.cvmfs.json
[2025-02-20 23:28:09] drwx------ 4 boinc boinc      4096 Feb 20 16:29 pilot3
[2025-02-20 23:28:09] -rw------- 1 boinc boinc 326001547 Feb 20 23:26 HITS.43078919._071095.pool.root.1
[2025-02-20 23:28:09] -rw------- 1 boinc boinc        95 Feb 20 23:27 pilot_heartbeat.json
[2025-02-20 23:28:09] -rw-r--r-- 1 boinc boinc       532 Feb 20 23:27 boinc_task_state.xml
[2025-02-20 23:28:09] -rw------- 1 boinc boinc      1035 Feb 20 23:27 memory_monitor_summary.json
[2025-02-20 23:28:09] -rw------- 1 boinc boinc   1586690 Feb 20 23:27 agis_ddmendpoints.agis.ALL.json
[2025-02-20 23:28:09] -rw------- 1 boinc boinc    464495 Feb 20 23:27 log.43078919._071095.job.log.tgz.1
[2025-02-20 23:28:09] -rw-r--r-- 1 boinc boinc      8192 Feb 20 23:27 boinc_mmap_file
[2025-02-20 23:28:09] -rw-r--r-- 1 boinc boinc        28 Feb 20 23:27 wrapper_checkpoint.txt
[2025-02-20 23:28:09] -rw------- 1 boinc boinc      7739 Feb 20 23:27 heartbeat.json
[2025-02-20 23:28:09] -rw------- 1 boinc boinc      4483 Feb 20 23:28 pilotlog.txt
[2025-02-20 23:28:09] -rw------- 1 boinc boinc   2878088 Feb 20 23:28 log.43078919._071095.job.log.1
[2025-02-20 23:28:09] -rw------- 1 boinc boinc       357 Feb 20 23:28 output.list
[2025-02-20 23:28:09] -rw-r--r-- 1 boinc boinc       620 Feb 20 23:28 runtime_log
[2025-02-20 23:28:09] -rw------- 1 boinc boinc   3358720 Feb 20 23:28 result.tar.gz
[2025-02-20 23:28:09] -rw-r--r-- 1 boinc boinc     11424 Feb 20 23:28 runtime_log.err
[2025-02-20 23:28:09] -rw------- 1 boinc boinc       666 Feb 20 23:28 DuQODmaFc46n9Rq4apOajLDm4fhM0noT9bVoFjIUDmlGZKDmybAjOm.diag
[2025-02-20 23:28:09] -rw-r--r-- 1 boinc boinc     21917 Feb 20 23:28 stderr.txt
[2025-02-20 23:28:09] HITS file was successfully produced:
[2025-02-20 23:28:09] -rw------- 1 boinc boinc 326001547 Feb 20 23:26 shared/HITS.pool.root.1
[2025-02-20 23:28:09]  *** Contents of shared directory: ***
[2025-02-20 23:28:09] total 654296
[2025-02-20 23:28:09] -rw-r--r-- 2 boinc boinc 340103730 Feb 20 16:29 ATLAS.root_0
[2025-02-20 23:28:09] -rw-r--r-- 2 boinc boinc     17569 Feb 20 16:29 start_atlas.sh
[2025-02-20 23:28:09] -rw-r--r-- 2 boinc boinc    503566 Feb 20 16:29 input.tar.gz
[2025-02-20 23:28:09] -rw------- 1 boinc boinc 326001547 Feb 20 23:26 HITS.pool.root.1
[2025-02-20 23:28:09] -rw------- 1 boinc boinc   3358720 Feb 20 23:28 result.tar.gz
23:28:11 (2563699): run_atlas exited; CPU time 94934.236701
23:28:11 (2563699): called boinc_finish(0)

</stderr_txt>
]]>

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